Query 027064
Match_columns 229
No_of_seqs 153 out of 1146
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 04:27:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027064.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027064hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02516 methylenetetrahydrofo 100.0 2.4E-74 5.2E-79 515.9 25.3 229 1-229 1-229 (299)
2 PRK14171 bifunctional 5,10-met 100.0 2.2E-74 4.7E-79 513.9 24.9 221 8-229 1-221 (288)
3 PRK14187 bifunctional 5,10-met 100.0 4.3E-74 9.4E-79 513.2 24.8 222 8-229 1-222 (294)
4 PRK14170 bifunctional 5,10-met 100.0 4.2E-74 9.1E-79 511.2 24.3 219 8-229 1-219 (284)
5 COG0190 FolD 5,10-methylene-te 100.0 8.5E-74 1.9E-78 505.7 25.2 218 10-229 1-218 (283)
6 PRK14177 bifunctional 5,10-met 100.0 6.6E-74 1.4E-78 509.9 24.4 221 7-229 1-221 (284)
7 PLN02616 tetrahydrofolate dehy 100.0 7.8E-74 1.7E-78 521.3 25.1 224 6-229 70-293 (364)
8 PLN02897 tetrahydrofolate dehy 100.0 9.9E-74 2.1E-78 518.6 24.8 224 6-229 53-276 (345)
9 PRK14172 bifunctional 5,10-met 100.0 1.3E-73 2.8E-78 507.0 24.2 220 8-229 1-220 (278)
10 PRK14169 bifunctional 5,10-met 100.0 1.9E-73 4.2E-78 506.8 24.6 218 9-229 1-218 (282)
11 PRK14166 bifunctional 5,10-met 100.0 2.1E-73 4.5E-78 506.6 24.7 218 10-229 2-219 (282)
12 PRK14168 bifunctional 5,10-met 100.0 1.8E-73 4E-78 510.1 24.4 223 7-229 1-227 (297)
13 PRK14193 bifunctional 5,10-met 100.0 2.6E-73 5.7E-78 506.4 24.6 220 7-229 1-222 (284)
14 PRK14182 bifunctional 5,10-met 100.0 2.7E-73 5.8E-78 505.6 24.6 216 11-229 3-219 (282)
15 PRK14176 bifunctional 5,10-met 100.0 3.6E-73 7.8E-78 505.9 25.1 221 7-229 6-226 (287)
16 PRK14167 bifunctional 5,10-met 100.0 2.9E-73 6.4E-78 508.8 24.2 219 8-229 1-223 (297)
17 PRK14190 bifunctional 5,10-met 100.0 3E-73 6.5E-78 506.3 23.9 220 7-229 1-220 (284)
18 PRK14186 bifunctional 5,10-met 100.0 3.8E-73 8.2E-78 508.1 24.6 220 8-229 1-220 (297)
19 PRK14185 bifunctional 5,10-met 100.0 3.6E-73 7.8E-78 507.1 24.2 218 10-229 2-223 (293)
20 PRK14173 bifunctional 5,10-met 100.0 6.2E-73 1.3E-77 504.7 23.8 217 7-229 1-217 (287)
21 PRK14183 bifunctional 5,10-met 100.0 9.9E-73 2.1E-77 501.8 24.5 218 10-229 2-219 (281)
22 PRK10792 bifunctional 5,10-met 100.0 9E-73 1.9E-77 503.2 24.1 221 7-229 1-221 (285)
23 PRK14180 bifunctional 5,10-met 100.0 1.1E-72 2.3E-77 502.0 24.4 219 10-229 2-220 (282)
24 PRK14184 bifunctional 5,10-met 100.0 2.6E-72 5.6E-77 500.5 24.1 218 10-229 2-223 (286)
25 PRK14181 bifunctional 5,10-met 100.0 4.5E-72 9.8E-77 498.8 23.9 214 11-229 2-219 (287)
26 PRK14189 bifunctional 5,10-met 100.0 8.7E-72 1.9E-76 497.2 24.4 220 7-229 1-220 (285)
27 PRK14191 bifunctional 5,10-met 100.0 1.4E-71 3.1E-76 495.5 24.0 218 10-229 2-219 (285)
28 PRK14175 bifunctional 5,10-met 100.0 4.2E-71 9.1E-76 493.2 24.1 220 7-229 1-220 (286)
29 PRK14179 bifunctional 5,10-met 100.0 2.4E-70 5.1E-75 487.7 24.7 220 8-229 1-220 (284)
30 PRK14174 bifunctional 5,10-met 100.0 5.6E-70 1.2E-74 487.8 24.4 219 11-229 3-225 (295)
31 PRK14194 bifunctional 5,10-met 100.0 5E-69 1.1E-73 482.3 25.2 220 7-229 2-221 (301)
32 PRK14178 bifunctional 5,10-met 100.0 4.4E-69 9.5E-74 478.3 23.0 213 11-229 2-214 (279)
33 PRK14188 bifunctional 5,10-met 100.0 1.9E-67 4.2E-72 472.1 25.2 220 8-229 1-220 (296)
34 KOG4230 C1-tetrahydrofolate sy 100.0 5.3E-65 1.1E-69 478.9 21.6 223 7-229 1-224 (935)
35 PRK14192 bifunctional 5,10-met 100.0 2.4E-62 5.2E-67 437.4 23.2 221 7-229 1-221 (283)
36 KOG0089 Methylenetetrahydrofol 100.0 2E-59 4.3E-64 409.2 20.6 222 8-229 7-238 (309)
37 PF00763 THF_DHG_CYH: Tetrahyd 100.0 5.1E-37 1.1E-41 241.6 11.5 117 10-127 1-117 (117)
38 cd01079 NAD_bind_m-THF_DH NAD 100.0 3.6E-36 7.8E-41 254.6 10.0 108 122-229 1-146 (197)
39 PF02882 THF_DHG_CYH_C: Tetrah 100.0 2.5E-33 5.5E-38 231.6 8.6 98 130-229 1-98 (160)
40 cd01080 NAD_bind_m-THF_DH_Cycl 99.9 2.6E-26 5.6E-31 191.3 9.4 106 122-229 1-106 (168)
41 cd05212 NAD_bind_m-THF_DH_Cycl 99.9 2.4E-26 5.3E-31 186.3 8.7 87 143-229 4-90 (140)
42 TIGR01809 Shik-DH-AROM shikima 99.5 2.8E-13 6E-18 121.1 13.4 169 45-224 9-204 (282)
43 PRK00258 aroE shikimate 5-dehy 99.5 2.4E-13 5.3E-18 121.0 10.3 154 58-222 22-197 (278)
44 PRK12549 shikimate 5-dehydroge 99.5 1.1E-12 2.3E-17 117.6 13.4 171 39-219 4-201 (284)
45 PRK12749 quinate/shikimate deh 99.4 1.5E-12 3.2E-17 117.0 13.3 144 46-200 12-157 (288)
46 PRK12548 shikimate 5-dehydroge 99.4 1.5E-12 3.3E-17 116.7 12.0 144 46-200 14-159 (289)
47 TIGR00507 aroE shikimate 5-deh 99.4 1.3E-12 2.9E-17 115.6 10.2 153 58-221 17-189 (270)
48 COG0169 AroE Shikimate 5-dehyd 99.4 2.5E-12 5.4E-17 115.4 10.5 152 58-219 23-199 (283)
49 PRK14027 quinate/shikimate deh 99.4 5.7E-12 1.2E-16 113.0 12.1 165 47-219 10-203 (283)
50 PRK12550 shikimate 5-dehydroge 99.4 8.4E-12 1.8E-16 111.4 12.6 167 37-219 6-187 (272)
51 PRK09310 aroDE bifunctional 3- 99.3 3.5E-11 7.5E-16 115.0 12.9 165 46-221 220-401 (477)
52 PLN02520 bifunctional 3-dehydr 99.1 2.3E-09 5E-14 103.7 13.9 144 46-200 257-411 (529)
53 COG0373 HemA Glutamyl-tRNA red 98.9 1E-09 2.2E-14 103.0 5.5 101 116-228 138-257 (414)
54 cd05191 NAD_bind_amino_acid_DH 98.9 6.7E-09 1.5E-13 76.9 7.3 65 149-226 1-70 (86)
55 PF01488 Shikimate_DH: Shikima 98.8 2E-09 4.4E-14 86.1 2.4 69 157-226 2-92 (135)
56 PF00670 AdoHcyase_NAD: S-aden 98.8 4.5E-09 9.8E-14 87.2 4.5 71 157-228 13-96 (162)
57 PRK13940 glutamyl-tRNA reducta 98.7 2.9E-08 6.4E-13 93.5 7.2 79 149-228 163-261 (414)
58 PTZ00075 Adenosylhomocysteinas 98.7 4E-08 8.7E-13 93.8 6.6 71 157-228 244-327 (476)
59 PRK00676 hemA glutamyl-tRNA re 98.6 1.1E-07 2.3E-12 87.4 7.3 77 149-227 157-247 (338)
60 PRK08306 dipicolinate synthase 98.4 4.6E-07 1E-11 81.7 6.7 68 152-220 137-220 (296)
61 cd05311 NAD_bind_2_malic_enz N 98.4 8.9E-07 1.9E-11 77.0 7.2 78 149-228 7-114 (226)
62 PRK05476 S-adenosyl-L-homocyst 98.3 6E-07 1.3E-11 84.9 5.6 78 148-226 192-283 (425)
63 TIGR02853 spore_dpaA dipicolin 98.3 1.3E-06 2.7E-11 78.7 6.7 72 149-221 132-220 (287)
64 PLN00203 glutamyl-tRNA reducta 98.2 2.1E-06 4.6E-11 83.1 6.5 80 148-228 245-348 (519)
65 TIGR01035 hemA glutamyl-tRNA r 98.2 1.9E-06 4.2E-11 81.1 6.1 78 150-228 163-259 (417)
66 PRK00045 hemA glutamyl-tRNA re 98.2 2.1E-06 4.5E-11 81.0 5.6 79 149-228 164-261 (423)
67 TIGR00936 ahcY adenosylhomocys 98.1 3E-06 6.4E-11 79.8 5.6 77 149-226 176-266 (406)
68 COG0499 SAM1 S-adenosylhomocys 98.1 6.1E-06 1.3E-10 76.2 6.4 80 148-228 190-282 (420)
69 cd00401 AdoHcyase S-adenosyl-L 98.1 1.3E-05 2.7E-10 75.8 7.9 78 147-225 182-272 (413)
70 cd01065 NAD_bind_Shikimate_DH 98.0 2.8E-05 6E-10 62.3 8.2 73 150-223 2-94 (155)
71 cd05213 NAD_bind_Glutamyl_tRNA 98.0 1.6E-05 3.4E-10 72.1 7.1 74 149-223 160-251 (311)
72 cd01078 NAD_bind_H4MPT_DH NADP 98.0 1.6E-05 3.5E-10 66.7 6.4 76 148-223 5-110 (194)
73 PLN02494 adenosylhomocysteinas 98.0 1.2E-05 2.5E-10 77.1 6.0 75 150-225 236-324 (477)
74 cd01075 NAD_bind_Leu_Phe_Val_D 97.9 2.9E-05 6.3E-10 66.2 7.3 71 148-219 3-94 (200)
75 PRK12862 malic enzyme; Reviewe 97.9 6.4E-05 1.4E-09 75.9 9.9 157 56-229 96-279 (763)
76 PRK07232 bifunctional malic en 97.9 8.8E-05 1.9E-09 74.7 10.1 158 55-229 87-271 (752)
77 PRK06718 precorrin-2 dehydroge 97.8 3.4E-05 7.4E-10 66.0 5.9 59 163-222 6-82 (202)
78 PRK06719 precorrin-2 dehydroge 97.8 4E-05 8.7E-10 63.1 5.3 59 163-222 9-82 (157)
79 PF02826 2-Hacid_dh_C: D-isome 97.7 9.4E-05 2E-09 61.7 6.4 59 160-219 29-100 (178)
80 PF13241 NAD_binding_7: Putati 97.7 5.4E-05 1.2E-09 57.8 4.5 59 163-222 3-72 (103)
81 PRK14982 acyl-ACP reductase; P 97.7 0.00011 2.4E-09 67.8 7.0 71 153-223 141-228 (340)
82 PRK12861 malic enzyme; Reviewe 97.6 0.00018 3.9E-09 72.6 8.3 157 56-229 92-275 (764)
83 COG0281 SfcA Malic enzyme [Ene 97.6 0.00027 6E-09 66.5 8.6 159 53-229 99-287 (432)
84 TIGR00518 alaDH alanine dehydr 97.6 7.1E-05 1.5E-09 69.6 4.5 63 165-228 165-253 (370)
85 PRK15438 erythronate-4-phospha 97.5 0.00031 6.8E-09 65.7 8.2 64 155-219 104-176 (378)
86 TIGR01470 cysG_Nterm siroheme 97.5 0.00015 3.2E-09 62.3 5.5 58 163-221 5-80 (205)
87 PLN02928 oxidoreductase family 97.5 0.00031 6.8E-09 64.8 7.4 56 163-219 155-235 (347)
88 PRK00257 erythronate-4-phospha 97.5 0.00041 8.8E-09 65.0 8.2 64 155-219 104-176 (381)
89 PRK13243 glyoxylate reductase; 97.4 0.00041 9E-09 63.6 7.4 57 163-220 146-214 (333)
90 PRK14804 ornithine carbamoyltr 97.3 0.037 8E-07 50.5 18.9 148 52-217 53-225 (311)
91 PRK12480 D-lactate dehydrogena 97.3 0.00073 1.6E-08 62.0 7.2 58 163-221 142-209 (330)
92 PRK06436 glycerate dehydrogena 97.2 0.00085 1.8E-08 60.9 7.1 57 163-220 118-183 (303)
93 PRK14619 NAD(P)H-dependent gly 97.2 0.00083 1.8E-08 60.5 7.0 55 166-221 3-58 (308)
94 PRK04284 ornithine carbamoyltr 97.2 0.031 6.7E-07 51.5 16.8 146 52-217 55-231 (332)
95 PRK01438 murD UDP-N-acetylmura 97.2 0.00096 2.1E-08 63.4 6.9 64 158-222 7-90 (480)
96 PRK14031 glutamate dehydrogena 97.2 0.0043 9.4E-08 59.3 11.3 53 145-198 202-259 (444)
97 KOG1370 S-adenosylhomocysteine 97.2 0.0006 1.3E-08 62.3 5.0 83 145-228 192-287 (434)
98 PRK00779 ornithine carbamoyltr 97.1 0.042 9.1E-07 50.0 16.8 148 52-217 53-224 (304)
99 PRK07574 formate dehydrogenase 97.1 0.0013 2.9E-08 61.6 7.2 56 163-219 188-257 (385)
100 PRK15469 ghrA bifunctional gly 97.1 0.0016 3.4E-08 59.4 7.4 56 163-219 132-199 (312)
101 cd05312 NAD_bind_1_malic_enz N 97.1 0.0011 2.3E-08 59.8 6.1 80 149-229 7-124 (279)
102 PRK08410 2-hydroxyacid dehydro 97.1 0.0016 3.5E-08 59.2 7.3 56 163-219 141-205 (311)
103 PRK02102 ornithine carbamoyltr 97.1 0.069 1.5E-06 49.3 18.0 187 11-217 10-231 (331)
104 PRK02255 putrescine carbamoylt 97.1 0.065 1.4E-06 49.6 17.8 147 52-216 52-228 (338)
105 PRK08605 D-lactate dehydrogena 97.1 0.0017 3.6E-08 59.6 7.1 57 163-220 142-210 (332)
106 PRK06932 glycerate dehydrogena 97.0 0.0017 3.7E-08 59.1 7.1 56 163-219 143-206 (314)
107 cd00762 NAD_bind_malic_enz NAD 97.0 0.001 2.2E-08 59.1 5.3 80 149-229 7-125 (254)
108 PRK06487 glycerate dehydrogena 97.0 0.002 4.2E-08 58.8 7.2 56 163-219 144-206 (317)
109 TIGR00658 orni_carb_tr ornithi 97.0 0.048 1E-06 49.6 16.1 148 52-217 49-223 (304)
110 TIGR00670 asp_carb_tr aspartat 97.0 0.069 1.5E-06 48.6 17.1 149 52-217 49-223 (301)
111 PRK14805 ornithine carbamoyltr 97.0 0.1 2.2E-06 47.5 18.1 130 52-200 48-180 (302)
112 PF01210 NAD_Gly3P_dh_N: NAD-d 97.0 0.0011 2.4E-08 54.1 4.8 52 169-221 1-80 (157)
113 COG0111 SerA Phosphoglycerate 97.0 0.0019 4.1E-08 59.3 6.8 57 162-219 137-206 (324)
114 PLN02342 ornithine carbamoyltr 97.0 0.07 1.5E-06 49.5 16.8 148 52-217 95-266 (348)
115 PRK13403 ketol-acid reductoiso 97.0 0.0019 4.1E-08 59.4 6.4 56 164-220 13-81 (335)
116 PRK12562 ornithine carbamoyltr 96.9 0.075 1.6E-06 49.1 16.9 149 52-218 55-233 (334)
117 PF03446 NAD_binding_2: NAD bi 96.9 0.0014 3.1E-08 53.7 5.0 52 168-220 2-67 (163)
118 PLN03129 NADP-dependent malic 96.9 0.0044 9.5E-08 60.8 9.2 153 59-229 199-420 (581)
119 PF07991 IlvN: Acetohydroxy ac 96.9 0.0019 4.1E-08 53.9 5.7 54 165-219 2-69 (165)
120 PRK13529 malate dehydrogenase; 96.9 0.0077 1.7E-07 58.9 10.4 153 59-229 174-401 (563)
121 PRK15409 bifunctional glyoxyla 96.9 0.0031 6.8E-08 57.7 7.3 57 162-219 140-209 (323)
122 PRK11790 D-3-phosphoglycerate 96.9 0.003 6.5E-08 59.6 7.3 56 163-219 147-212 (409)
123 PRK01713 ornithine carbamoyltr 96.9 0.094 2E-06 48.4 16.9 146 52-217 56-232 (334)
124 PF08501 Shikimate_dh_N: Shiki 96.9 0.00044 9.4E-09 51.0 1.2 67 59-133 14-81 (83)
125 PRK05579 bifunctional phosphop 96.8 0.0062 1.3E-07 57.4 9.0 77 148-224 167-281 (399)
126 PLN02527 aspartate carbamoyltr 96.8 0.16 3.5E-06 46.2 17.9 150 52-218 49-226 (306)
127 PRK06141 ornithine cyclodeamin 96.8 0.0036 7.8E-08 56.9 7.1 64 165-229 123-209 (314)
128 PRK13814 pyrB aspartate carbam 96.8 0.3 6.6E-06 44.6 19.5 148 52-216 55-223 (310)
129 PLN03139 formate dehydrogenase 96.8 0.0038 8.2E-08 58.6 7.3 56 163-219 195-264 (386)
130 cd01076 NAD_bind_1_Glu_DH NAD( 96.8 0.0041 8.9E-08 54.2 7.0 54 145-199 5-63 (227)
131 TIGR02992 ectoine_eutC ectoine 96.8 0.0024 5.1E-08 58.3 5.7 63 166-229 128-214 (326)
132 TIGR01327 PGDH D-3-phosphoglyc 96.8 0.0041 8.8E-08 60.5 7.4 58 162-220 133-203 (525)
133 TIGR00561 pntA NAD(P) transhyd 96.7 0.0024 5.2E-08 62.0 5.6 77 152-229 139-271 (511)
134 PLN02306 hydroxypyruvate reduc 96.7 0.0049 1.1E-07 57.9 7.5 56 163-219 161-245 (386)
135 PTZ00317 NADP-dependent malic 96.7 0.014 2.9E-07 57.2 10.6 130 82-229 229-400 (559)
136 COG1648 CysG Siroheme synthase 96.7 0.0027 5.9E-08 54.8 5.2 60 163-223 8-85 (210)
137 PF10727 Rossmann-like: Rossma 96.7 0.0017 3.7E-08 51.8 3.7 52 167-219 10-77 (127)
138 PRK09260 3-hydroxybutyryl-CoA 96.7 0.0039 8.5E-08 55.5 6.4 53 168-221 2-92 (288)
139 PRK14106 murD UDP-N-acetylmura 96.7 0.0041 8.9E-08 58.4 6.7 57 164-221 2-79 (450)
140 PRK08291 ectoine utilization p 96.7 0.0053 1.1E-07 56.1 7.1 64 165-229 130-217 (330)
141 PF03949 Malic_M: Malic enzyme 96.7 0.0016 3.5E-08 57.9 3.5 79 150-229 8-125 (255)
142 PRK13581 D-3-phosphoglycerate 96.7 0.005 1.1E-07 59.8 7.2 58 163-221 136-205 (526)
143 PRK05479 ketol-acid reductoiso 96.7 0.0046 9.9E-08 57.0 6.5 54 165-219 15-82 (330)
144 PRK05562 precorrin-2 dehydroge 96.7 0.0036 7.7E-08 54.7 5.5 59 163-222 21-97 (223)
145 cd05313 NAD_bind_2_Glu_DH NAD( 96.6 0.0057 1.2E-07 54.4 6.8 56 144-200 11-71 (254)
146 PRK09414 glutamate dehydrogena 96.6 0.019 4.2E-07 54.9 10.8 53 146-199 207-264 (445)
147 PF00056 Ldh_1_N: lactate/mala 96.6 0.0033 7.2E-08 50.7 4.8 54 169-222 2-81 (141)
148 PRK07340 ornithine cyclodeamin 96.5 0.015 3.2E-07 52.7 9.1 60 164-224 122-202 (304)
149 PRK00856 pyrB aspartate carbam 96.5 0.38 8.2E-06 43.9 18.0 152 52-219 55-222 (305)
150 PRK08618 ornithine cyclodeamin 96.5 0.0097 2.1E-07 54.3 7.6 62 166-229 126-211 (325)
151 cd05211 NAD_bind_Glu_Leu_Phe_V 96.5 0.0079 1.7E-07 52.1 6.7 49 152-201 8-57 (217)
152 cd05291 HicDH_like L-2-hydroxy 96.5 0.0068 1.5E-07 54.7 6.6 55 168-223 1-81 (306)
153 PRK03515 ornithine carbamoyltr 96.5 0.23 5E-06 45.9 16.6 155 42-217 48-232 (336)
154 PRK11199 tyrA bifunctional cho 96.5 0.0068 1.5E-07 56.4 6.5 54 167-221 98-153 (374)
155 PLN02477 glutamate dehydrogena 96.4 0.0083 1.8E-07 56.8 6.7 54 146-200 181-239 (410)
156 TIGR00465 ilvC ketol-acid redu 96.4 0.0091 2E-07 54.5 6.7 54 165-219 1-68 (314)
157 PF03807 F420_oxidored: NADP o 96.4 0.0058 1.3E-07 45.1 4.5 51 169-220 1-71 (96)
158 COG1052 LdhA Lactate dehydroge 96.4 0.011 2.5E-07 54.2 7.3 56 163-219 142-209 (324)
159 PRK14030 glutamate dehydrogena 96.4 0.04 8.6E-07 52.8 11.1 50 146-196 203-256 (445)
160 TIGR01505 tartro_sem_red 2-hyd 96.4 0.0086 1.9E-07 53.3 6.3 52 169-221 1-66 (291)
161 PF03721 UDPG_MGDP_dh_N: UDP-g 96.3 0.0042 9E-08 52.4 3.8 54 168-222 1-88 (185)
162 PRK06398 aldose dehydrogenase; 96.3 0.012 2.7E-07 50.9 6.9 59 164-222 3-84 (258)
163 COG2085 Predicted dinucleotide 96.3 0.011 2.3E-07 51.2 6.4 54 168-222 2-72 (211)
164 PRK08293 3-hydroxybutyryl-CoA 96.3 0.01 2.2E-07 52.9 6.4 52 168-220 4-94 (287)
165 PRK09424 pntA NAD(P) transhydr 96.3 0.0055 1.2E-07 59.5 4.8 48 151-199 139-196 (509)
166 PF13460 NAD_binding_10: NADH( 96.3 0.0085 1.8E-07 48.7 5.3 52 170-221 1-71 (183)
167 PRK09072 short chain dehydroge 96.2 0.011 2.3E-07 51.1 5.8 37 164-200 2-38 (263)
168 TIGR00521 coaBC_dfp phosphopan 96.2 0.025 5.4E-07 53.2 8.5 77 148-224 163-279 (390)
169 PRK07200 aspartate/ornithine c 96.2 0.99 2.1E-05 42.7 19.2 167 41-218 60-270 (395)
170 PRK04523 N-acetylornithine car 96.1 0.41 8.9E-06 44.2 16.3 191 11-218 6-252 (335)
171 PRK06949 short chain dehydroge 96.1 0.013 2.8E-07 50.1 6.0 38 163-200 5-42 (258)
172 PRK10637 cysG siroheme synthas 96.1 0.0082 1.8E-07 57.4 5.2 59 163-222 8-84 (457)
173 PRK08192 aspartate carbamoyltr 96.1 0.59 1.3E-05 43.2 17.2 151 52-219 54-235 (338)
174 PRK11891 aspartate carbamoyltr 96.1 0.55 1.2E-05 44.9 17.4 151 52-219 136-317 (429)
175 PRK15461 NADH-dependent gamma- 96.1 0.016 3.5E-07 52.0 6.7 54 168-222 2-69 (296)
176 PRK01710 murD UDP-N-acetylmura 96.1 0.015 3.2E-07 55.2 6.8 56 165-221 12-88 (458)
177 PRK06130 3-hydroxybutyryl-CoA 96.1 0.013 2.7E-07 52.7 5.9 53 168-221 5-90 (311)
178 TIGR03316 ygeW probable carbam 96.1 0.64 1.4E-05 43.4 17.3 157 52-218 52-253 (357)
179 PRK00066 ldh L-lactate dehydro 96.1 0.018 3.9E-07 52.4 6.9 56 166-222 5-85 (315)
180 COG0569 TrkA K+ transport syst 96.0 0.011 2.4E-07 51.3 5.1 52 168-220 1-76 (225)
181 PRK03369 murD UDP-N-acetylmura 96.0 0.014 3.1E-07 56.0 6.3 57 165-222 10-82 (488)
182 COG2084 MmsB 3-hydroxyisobutyr 96.0 0.015 3.4E-07 52.5 6.0 53 168-221 1-68 (286)
183 COG1748 LYS9 Saccharopine dehy 96.0 0.012 2.6E-07 55.4 5.4 53 168-221 2-79 (389)
184 PF02737 3HCDH_N: 3-hydroxyacy 96.0 0.011 2.4E-07 49.5 4.7 31 169-200 1-31 (180)
185 COG0686 Ald Alanine dehydrogen 95.9 0.0056 1.2E-07 56.1 2.8 62 166-228 167-254 (371)
186 PRK12828 short chain dehydroge 95.9 0.013 2.9E-07 49.0 4.9 37 164-200 4-40 (239)
187 PRK11559 garR tartronate semia 95.9 0.023 4.9E-07 50.6 6.6 53 168-221 3-69 (296)
188 PRK07856 short chain dehydroge 95.9 0.016 3.5E-07 49.6 5.5 37 164-200 3-39 (252)
189 KOG0069 Glyoxylate/hydroxypyru 95.9 0.022 4.8E-07 52.6 6.6 56 162-219 157-226 (336)
190 PRK12429 3-hydroxybutyrate deh 95.9 0.019 4.2E-07 48.8 5.8 36 165-200 2-37 (258)
191 PRK00141 murD UDP-N-acetylmura 95.9 0.019 4.2E-07 54.8 6.4 57 164-221 12-85 (473)
192 PF01262 AlaDh_PNT_C: Alanine 95.9 0.004 8.6E-08 51.4 1.5 63 165-228 18-125 (168)
193 PRK06523 short chain dehydroge 95.8 0.022 4.9E-07 48.8 6.2 37 164-200 6-42 (260)
194 PRK06550 fabG 3-ketoacyl-(acyl 95.8 0.029 6.4E-07 47.2 6.8 58 164-221 2-78 (235)
195 PRK08862 short chain dehydroge 95.8 0.013 2.9E-07 50.2 4.5 37 164-200 2-38 (227)
196 PRK11064 wecC UDP-N-acetyl-D-m 95.8 0.018 3.8E-07 54.4 5.7 53 168-221 4-86 (415)
197 TIGR03026 NDP-sugDHase nucleot 95.8 0.02 4.3E-07 53.7 6.0 53 169-222 2-88 (411)
198 PRK07066 3-hydroxybutyryl-CoA 95.8 0.027 5.9E-07 51.6 6.7 51 168-219 8-92 (321)
199 PRK07523 gluconate 5-dehydroge 95.8 0.012 2.7E-07 50.3 4.2 37 164-200 7-43 (255)
200 PRK06124 gluconate 5-dehydroge 95.7 0.013 2.8E-07 50.1 4.3 38 163-200 7-44 (256)
201 PTZ00117 malate dehydrogenase; 95.7 0.035 7.6E-07 50.6 7.3 57 165-223 3-86 (319)
202 PTZ00079 NADP-specific glutama 95.7 0.028 6E-07 53.9 6.8 53 147-200 213-270 (454)
203 PRK12809 putative oxidoreducta 95.7 0.11 2.3E-06 51.7 11.2 121 58-200 204-342 (639)
204 PLN02712 arogenate dehydrogena 95.7 0.027 5.9E-07 56.4 7.0 57 162-219 364-434 (667)
205 PRK12367 short chain dehydroge 95.7 0.022 4.8E-07 49.6 5.6 58 164-221 11-90 (245)
206 PRK06129 3-hydroxyacyl-CoA deh 95.7 0.025 5.4E-07 51.0 6.1 32 168-200 3-34 (308)
207 PRK02472 murD UDP-N-acetylmura 95.7 0.028 6.1E-07 52.7 6.7 35 165-200 3-37 (447)
208 PRK08085 gluconate 5-dehydroge 95.7 0.016 3.4E-07 49.7 4.5 37 164-200 6-42 (254)
209 PRK07231 fabG 3-ketoacyl-(acyl 95.6 0.017 3.6E-07 48.9 4.5 38 164-201 2-39 (251)
210 PLN02545 3-hydroxybutyryl-CoA 95.6 0.02 4.3E-07 51.1 5.1 32 168-200 5-36 (295)
211 TIGR02356 adenyl_thiF thiazole 95.6 0.025 5.3E-07 48.2 5.4 36 164-200 18-54 (202)
212 PRK06035 3-hydroxyacyl-CoA deh 95.6 0.022 4.7E-07 50.8 5.3 32 168-200 4-35 (291)
213 PLN02688 pyrroline-5-carboxyla 95.6 0.027 5.9E-07 49.2 5.7 53 169-223 2-73 (266)
214 PRK12771 putative glutamate sy 95.5 0.04 8.7E-07 53.7 7.4 106 76-199 53-168 (564)
215 PLN02256 arogenate dehydrogena 95.5 0.051 1.1E-06 49.3 7.6 56 164-220 33-102 (304)
216 TIGR01832 kduD 2-deoxy-D-gluco 95.5 0.023 4.9E-07 48.3 5.0 36 164-199 2-37 (248)
217 PRK07417 arogenate dehydrogena 95.5 0.021 4.5E-07 50.7 4.9 51 169-220 2-67 (279)
218 TIGR02355 moeB molybdopterin s 95.5 0.027 5.8E-07 49.5 5.5 35 164-199 21-56 (240)
219 PRK07424 bifunctional sterol d 95.5 0.033 7.2E-07 52.6 6.3 60 162-221 173-256 (406)
220 PRK05866 short chain dehydroge 95.4 0.034 7.4E-07 49.4 6.0 39 162-200 35-73 (293)
221 PRK07062 short chain dehydroge 95.4 0.022 4.7E-07 49.1 4.6 38 163-200 4-41 (265)
222 PRK00421 murC UDP-N-acetylmura 95.4 0.04 8.8E-07 52.3 6.8 57 165-222 5-78 (461)
223 PRK06463 fabG 3-ketoacyl-(acyl 95.4 0.031 6.7E-07 47.9 5.5 37 164-200 4-40 (255)
224 PRK05867 short chain dehydroge 95.4 0.021 4.6E-07 48.9 4.4 37 164-200 6-42 (253)
225 PRK07502 cyclohexadienyl dehyd 95.4 0.042 9.1E-07 49.4 6.4 54 167-221 6-77 (307)
226 PRK06138 short chain dehydroge 95.4 0.022 4.8E-07 48.3 4.4 37 164-200 2-38 (252)
227 TIGR03325 BphB_TodD cis-2,3-di 95.4 0.023 5E-07 49.0 4.6 37 164-200 2-38 (262)
228 PRK12475 thiamine/molybdopteri 95.4 0.036 7.7E-07 51.1 6.0 37 163-200 20-57 (338)
229 PRK06171 sorbitol-6-phosphate 95.4 0.047 1E-06 47.0 6.5 37 164-200 6-42 (266)
230 PRK07063 short chain dehydroge 95.4 0.022 4.8E-07 48.9 4.4 36 164-199 4-39 (260)
231 PLN00141 Tic62-NAD(P)-related 95.4 0.039 8.4E-07 47.6 5.9 57 164-220 14-95 (251)
232 PRK04690 murD UDP-N-acetylmura 95.3 0.042 9.2E-07 52.5 6.7 56 165-221 6-80 (468)
233 PRK06935 2-deoxy-D-gluconate 3 95.3 0.032 6.9E-07 47.9 5.3 37 164-200 12-48 (258)
234 PRK12829 short chain dehydroge 95.3 0.025 5.4E-07 48.3 4.6 37 164-200 8-44 (264)
235 PRK08339 short chain dehydroge 95.3 0.02 4.4E-07 49.8 4.1 37 164-200 5-41 (263)
236 PRK08213 gluconate 5-dehydroge 95.3 0.021 4.6E-07 49.0 4.2 37 164-200 9-45 (259)
237 TIGR02622 CDP_4_6_dhtase CDP-g 95.3 0.048 1E-06 49.3 6.7 35 165-199 2-36 (349)
238 PRK00094 gpsA NAD(P)H-dependen 95.3 0.048 1E-06 48.7 6.6 52 168-220 2-81 (325)
239 PF05368 NmrA: NmrA-like famil 95.3 0.03 6.6E-07 47.6 5.1 52 170-221 1-75 (233)
240 PRK07530 3-hydroxybutyryl-CoA 95.3 0.046 9.9E-07 48.7 6.4 32 168-200 5-36 (292)
241 PRK06057 short chain dehydroge 95.3 0.024 5.2E-07 48.7 4.4 37 164-200 4-40 (255)
242 PRK08265 short chain dehydroge 95.3 0.028 6.1E-07 48.6 4.8 37 164-200 3-39 (261)
243 PRK06182 short chain dehydroge 95.3 0.043 9.3E-07 47.6 6.0 35 166-200 2-36 (273)
244 PRK07890 short chain dehydroge 95.3 0.021 4.6E-07 48.7 4.0 35 165-199 3-37 (258)
245 PRK07531 bifunctional 3-hydrox 95.3 0.042 9.2E-07 53.0 6.5 53 168-221 5-91 (495)
246 PRK05717 oxidoreductase; Valid 95.3 0.032 7E-07 47.8 5.2 38 162-199 5-42 (255)
247 PLN02253 xanthoxin dehydrogena 95.2 0.046 1E-06 47.5 6.1 36 164-199 15-50 (280)
248 PRK08223 hypothetical protein; 95.2 0.044 9.4E-07 49.6 6.0 35 164-199 24-59 (287)
249 PRK06172 short chain dehydroge 95.2 0.026 5.6E-07 48.2 4.4 37 164-200 4-40 (253)
250 PRK08628 short chain dehydroge 95.2 0.033 7.2E-07 47.7 5.0 37 163-199 3-39 (258)
251 PRK08416 7-alpha-hydroxysteroi 95.2 0.03 6.4E-07 48.4 4.7 36 164-199 5-40 (260)
252 PRK12743 oxidoreductase; Provi 95.2 0.06 1.3E-06 46.3 6.6 34 166-199 1-34 (256)
253 PRK06179 short chain dehydroge 95.2 0.043 9.4E-07 47.4 5.7 35 166-200 3-37 (270)
254 PRK07679 pyrroline-5-carboxyla 95.2 0.057 1.2E-06 47.9 6.6 54 166-220 2-75 (279)
255 TIGR02354 thiF_fam2 thiamine b 95.2 0.039 8.6E-07 47.1 5.3 36 164-200 18-54 (200)
256 PRK14618 NAD(P)H-dependent gly 95.2 0.049 1.1E-06 49.3 6.2 54 167-221 4-85 (328)
257 PRK08993 2-deoxy-D-gluconate 3 95.1 0.07 1.5E-06 45.8 6.9 36 164-199 7-42 (253)
258 PRK09186 flagellin modificatio 95.1 0.032 7E-07 47.5 4.7 35 165-199 2-36 (256)
259 PRK06841 short chain dehydroge 95.1 0.037 8E-07 47.2 5.0 37 164-200 12-48 (255)
260 PRK05690 molybdopterin biosynt 95.1 0.041 8.9E-07 48.4 5.4 35 164-199 29-64 (245)
261 PRK05225 ketol-acid reductoiso 95.1 0.03 6.4E-07 53.9 4.7 55 164-219 33-106 (487)
262 TIGR01915 npdG NADPH-dependent 95.1 0.059 1.3E-06 46.1 6.2 52 169-221 2-79 (219)
263 TIGR01214 rmlD dTDP-4-dehydror 95.1 0.049 1.1E-06 47.4 5.8 54 169-222 1-62 (287)
264 PRK07097 gluconate 5-dehydroge 95.1 0.032 6.9E-07 48.2 4.5 38 163-200 6-43 (265)
265 TIGR01963 PHB_DH 3-hydroxybuty 95.1 0.05 1.1E-06 46.1 5.6 34 167-200 1-34 (255)
266 TIGR03589 PseB UDP-N-acetylglu 95.1 0.055 1.2E-06 48.8 6.2 57 165-221 2-85 (324)
267 TIGR01763 MalateDH_bact malate 95.1 0.07 1.5E-06 48.4 6.9 53 168-222 2-81 (305)
268 PLN02586 probable cinnamyl alc 95.0 0.11 2.5E-06 47.4 8.4 51 147-198 164-214 (360)
269 PF04127 DFP: DNA / pantothena 95.0 0.055 1.2E-06 45.8 5.8 60 165-224 1-96 (185)
270 cd05292 LDH_2 A subgroup of L- 95.0 0.056 1.2E-06 48.9 6.2 54 169-223 2-80 (308)
271 PRK07774 short chain dehydroge 95.0 0.04 8.7E-07 46.8 5.0 37 164-200 3-39 (250)
272 CHL00194 ycf39 Ycf39; Provisio 95.0 0.046 9.9E-07 49.0 5.5 52 169-220 2-74 (317)
273 PRK12490 6-phosphogluconate de 95.0 0.074 1.6E-06 47.8 6.7 52 169-221 2-70 (299)
274 PRK06545 prephenate dehydrogen 95.0 0.056 1.2E-06 49.9 6.1 53 168-221 1-71 (359)
275 PRK15181 Vi polysaccharide bio 95.0 0.076 1.6E-06 48.2 6.9 37 163-199 11-47 (348)
276 PRK01390 murD UDP-N-acetylmura 94.9 0.064 1.4E-06 50.8 6.5 56 165-221 7-76 (460)
277 PLN02989 cinnamyl-alcohol dehy 94.9 0.077 1.7E-06 47.2 6.7 33 166-198 4-36 (325)
278 PRK09242 tropinone reductase; 94.9 0.033 7.1E-07 47.8 4.2 36 164-199 6-41 (257)
279 PRK06125 short chain dehydroge 94.9 0.033 7.2E-07 47.9 4.2 37 164-200 4-40 (259)
280 PRK07819 3-hydroxybutyryl-CoA 94.9 0.05 1.1E-06 48.8 5.5 32 168-200 6-37 (286)
281 PRK07035 short chain dehydroge 94.9 0.034 7.4E-07 47.4 4.2 37 164-200 5-41 (252)
282 PRK06200 2,3-dihydroxy-2,3-dih 94.9 0.033 7.2E-07 48.0 4.2 36 165-200 4-39 (263)
283 PRK09291 short chain dehydroge 94.9 0.056 1.2E-06 46.0 5.5 33 167-199 2-34 (257)
284 PRK05872 short chain dehydroge 94.9 0.032 7E-07 49.5 4.2 37 164-200 6-42 (296)
285 PTZ00082 L-lactate dehydrogena 94.9 0.087 1.9E-06 48.2 7.1 55 166-222 5-86 (321)
286 PRK07060 short chain dehydroge 94.9 0.035 7.6E-07 46.9 4.2 37 164-200 6-42 (245)
287 COG0287 TyrA Prephenate dehydr 94.9 0.063 1.4E-06 48.3 6.0 54 167-221 3-75 (279)
288 PRK06194 hypothetical protein; 94.9 0.041 8.8E-07 48.0 4.7 37 164-200 3-39 (287)
289 PRK08264 short chain dehydroge 94.9 0.043 9.3E-07 46.3 4.7 57 164-220 3-83 (238)
290 PRK08703 short chain dehydroge 94.9 0.042 9E-07 46.6 4.6 37 164-200 3-39 (239)
291 PRK15059 tartronate semialdehy 94.9 0.064 1.4E-06 48.2 6.1 52 169-221 2-66 (292)
292 PRK08936 glucose-1-dehydrogena 94.8 0.048 1E-06 46.9 5.0 36 164-199 4-39 (261)
293 PF00899 ThiF: ThiF family; I 94.8 0.051 1.1E-06 42.9 4.7 32 167-199 2-34 (135)
294 cd00757 ThiF_MoeB_HesA_family 94.8 0.05 1.1E-06 47.1 5.0 35 164-199 18-53 (228)
295 PRK05876 short chain dehydroge 94.8 0.036 7.8E-07 48.7 4.2 37 164-200 3-39 (275)
296 PRK06223 malate dehydrogenase; 94.8 0.084 1.8E-06 47.3 6.6 53 168-222 3-82 (307)
297 cd00650 LDH_MDH_like NAD-depen 94.8 0.075 1.6E-06 46.8 6.2 54 170-223 1-83 (263)
298 PRK05808 3-hydroxybutyryl-CoA 94.8 0.04 8.7E-07 48.8 4.5 31 168-199 4-34 (282)
299 PRK02006 murD UDP-N-acetylmura 94.8 0.087 1.9E-06 50.5 7.1 56 165-221 5-80 (498)
300 PRK12826 3-ketoacyl-(acyl-carr 94.8 0.039 8.4E-07 46.6 4.2 36 165-200 4-39 (251)
301 PRK05565 fabG 3-ketoacyl-(acyl 94.8 0.047 1E-06 46.0 4.7 37 164-200 2-39 (247)
302 PLN02986 cinnamyl-alcohol dehy 94.7 0.1 2.2E-06 46.5 7.0 34 165-198 3-36 (322)
303 PRK12481 2-deoxy-D-gluconate 3 94.7 0.051 1.1E-06 46.8 5.0 36 164-199 5-40 (251)
304 PRK05653 fabG 3-ketoacyl-(acyl 94.7 0.052 1.1E-06 45.5 4.9 36 165-200 3-38 (246)
305 PRK08589 short chain dehydroge 94.7 0.046 9.9E-07 47.7 4.6 37 164-200 3-39 (272)
306 TIGR03366 HpnZ_proposed putati 94.7 0.11 2.4E-06 45.6 7.1 49 148-198 103-152 (280)
307 PLN02896 cinnamyl-alcohol dehy 94.7 0.086 1.9E-06 47.8 6.6 60 163-222 6-91 (353)
308 PRK07666 fabG 3-ketoacyl-(acyl 94.7 0.042 9.2E-07 46.5 4.3 36 165-200 5-40 (239)
309 PLN02662 cinnamyl-alcohol dehy 94.7 0.11 2.3E-06 46.0 6.9 34 166-199 3-36 (322)
310 PRK12769 putative oxidoreducta 94.7 0.098 2.1E-06 52.0 7.4 34 165-199 325-358 (654)
311 PRK08277 D-mannonate oxidoredu 94.7 0.044 9.5E-07 47.6 4.3 38 163-200 6-43 (278)
312 PRK07067 sorbitol dehydrogenas 94.6 0.046 1E-06 46.8 4.4 36 165-200 4-39 (257)
313 PRK07634 pyrroline-5-carboxyla 94.6 0.094 2E-06 45.1 6.3 54 166-220 3-76 (245)
314 PRK05854 short chain dehydroge 94.6 0.042 9.1E-07 49.3 4.2 36 164-199 11-46 (313)
315 PRK07576 short chain dehydroge 94.6 0.058 1.3E-06 46.8 5.0 37 164-200 6-42 (264)
316 PRK06114 short chain dehydroge 94.6 0.065 1.4E-06 46.0 5.3 37 164-200 5-41 (254)
317 PRK04308 murD UDP-N-acetylmura 94.6 0.1 2.3E-06 49.1 7.1 56 165-221 3-78 (445)
318 PRK07478 short chain dehydroge 94.6 0.048 1E-06 46.6 4.4 36 164-199 3-38 (254)
319 PF13738 Pyr_redox_3: Pyridine 94.6 0.061 1.3E-06 44.3 4.9 36 164-200 164-199 (203)
320 PRK13394 3-hydroxybutyrate deh 94.6 0.054 1.2E-06 46.2 4.7 36 164-199 4-39 (262)
321 PF01118 Semialdhyde_dh: Semia 94.6 0.11 2.4E-06 40.3 6.1 51 169-219 1-75 (121)
322 KOG1494 NAD-dependent malate d 94.6 0.051 1.1E-06 49.3 4.5 59 164-223 25-109 (345)
323 PRK08644 thiamine biosynthesis 94.6 0.071 1.5E-06 45.9 5.3 36 164-200 25-61 (212)
324 PRK07814 short chain dehydroge 94.5 0.047 1E-06 47.2 4.3 37 164-200 7-43 (263)
325 PRK06196 oxidoreductase; Provi 94.5 0.048 1E-06 48.7 4.5 39 162-200 21-59 (315)
326 PRK06077 fabG 3-ketoacyl-(acyl 94.5 0.13 2.8E-06 43.6 6.9 34 165-198 4-37 (252)
327 PRK06500 short chain dehydroge 94.5 0.052 1.1E-06 46.0 4.4 35 165-199 4-38 (249)
328 PRK07825 short chain dehydroge 94.5 0.045 9.7E-07 47.4 4.1 36 164-199 2-37 (273)
329 PLN00198 anthocyanidin reducta 94.5 0.16 3.4E-06 45.7 7.7 35 163-197 5-39 (338)
330 PLN02657 3,8-divinyl protochlo 94.5 0.088 1.9E-06 49.1 6.2 39 162-200 55-93 (390)
331 PRK12939 short chain dehydroge 94.5 0.054 1.2E-06 45.8 4.4 36 164-199 4-39 (250)
332 PRK08229 2-dehydropantoate 2-r 94.5 0.083 1.8E-06 47.8 5.8 31 168-199 3-33 (341)
333 PRK10423 transcriptional repre 94.5 1.2 2.6E-05 39.2 13.2 89 10-105 17-120 (327)
334 PRK01368 murD UDP-N-acetylmura 94.4 0.11 2.4E-06 49.5 6.9 54 166-221 5-74 (454)
335 PRK12742 oxidoreductase; Provi 94.4 0.075 1.6E-06 44.7 5.2 35 164-198 3-37 (237)
336 PRK05557 fabG 3-ketoacyl-(acyl 94.4 0.076 1.6E-06 44.5 5.2 37 164-200 2-38 (248)
337 PLN02427 UDP-apiose/xylose syn 94.4 0.11 2.4E-06 47.7 6.6 60 162-221 9-97 (386)
338 PRK08217 fabG 3-ketoacyl-(acyl 94.4 0.054 1.2E-06 45.8 4.2 36 165-200 3-38 (253)
339 PRK05786 fabG 3-ketoacyl-(acyl 94.4 0.053 1.2E-06 45.6 4.2 37 164-200 2-38 (238)
340 KOG1198 Zinc-binding oxidoredu 94.4 0.19 4.1E-06 46.5 8.1 78 146-223 131-238 (347)
341 PRK12823 benD 1,6-dihydroxycyc 94.4 0.07 1.5E-06 45.7 4.9 37 164-200 5-41 (260)
342 KOG0725 Reductases with broad 94.4 0.059 1.3E-06 48.0 4.6 39 163-201 4-42 (270)
343 PRK12937 short chain dehydroge 94.4 0.078 1.7E-06 44.7 5.1 36 164-199 2-37 (245)
344 PRK08818 prephenate dehydrogen 94.3 0.14 3E-06 48.0 7.1 56 166-221 3-62 (370)
345 PRK12779 putative bifunctional 94.3 0.097 2.1E-06 54.5 6.6 35 165-200 304-338 (944)
346 PRK12827 short chain dehydroge 94.3 0.082 1.8E-06 44.5 5.1 36 164-199 3-38 (249)
347 PLN02695 GDP-D-mannose-3',5'-e 94.3 0.099 2.1E-06 48.2 6.1 56 166-221 20-96 (370)
348 PRK08762 molybdopterin biosynt 94.3 0.068 1.5E-06 49.7 5.0 36 164-200 132-168 (376)
349 PRK09135 pteridine reductase; 94.3 0.077 1.7E-06 44.7 5.0 36 165-200 4-39 (249)
350 PRK06139 short chain dehydroge 94.3 0.049 1.1E-06 49.7 3.9 37 164-200 4-40 (330)
351 PRK08643 acetoin reductase; Va 94.2 0.062 1.3E-06 45.9 4.3 34 167-200 2-35 (256)
352 PRK05875 short chain dehydroge 94.2 0.06 1.3E-06 46.6 4.2 36 164-199 4-39 (276)
353 TIGR02279 PaaC-3OHAcCoADH 3-hy 94.2 0.071 1.5E-06 51.7 5.1 32 168-200 6-37 (503)
354 TIGR03206 benzo_BadH 2-hydroxy 94.2 0.081 1.8E-06 44.8 4.9 35 165-199 1-35 (250)
355 PRK05597 molybdopterin biosynt 94.2 0.088 1.9E-06 48.8 5.5 36 163-199 24-60 (355)
356 PRK05600 thiamine biosynthesis 94.2 0.085 1.8E-06 49.2 5.4 36 163-199 37-73 (370)
357 cd05293 LDH_1 A subgroup of L- 94.2 0.14 3E-06 46.7 6.7 55 168-223 4-84 (312)
358 PRK08226 short chain dehydroge 94.2 0.084 1.8E-06 45.3 5.0 36 165-200 4-39 (263)
359 PRK08268 3-hydroxy-acyl-CoA de 94.2 0.075 1.6E-06 51.6 5.1 32 168-200 8-39 (507)
360 cd05290 LDH_3 A subgroup of L- 94.2 0.12 2.6E-06 47.1 6.1 54 169-223 1-81 (307)
361 COG2910 Putative NADH-flavin r 94.2 0.11 2.4E-06 44.5 5.5 54 168-221 1-73 (211)
362 COG5322 Predicted dehydrogenas 94.2 0.14 3E-06 46.4 6.4 132 97-228 70-250 (351)
363 PRK08642 fabG 3-ketoacyl-(acyl 94.1 0.089 1.9E-06 44.6 5.0 35 165-199 3-37 (253)
364 PRK07792 fabG 3-ketoacyl-(acyl 94.1 0.085 1.8E-06 47.1 5.0 39 162-200 7-45 (306)
365 PRK08278 short chain dehydroge 94.1 0.086 1.9E-06 46.0 5.0 37 164-200 3-39 (273)
366 cd00704 MDH Malate dehydrogena 94.1 0.15 3.2E-06 46.8 6.6 55 169-223 2-89 (323)
367 PRK06198 short chain dehydroge 94.1 0.068 1.5E-06 45.7 4.2 37 164-200 3-40 (260)
368 PRK00683 murD UDP-N-acetylmura 94.1 0.15 3.2E-06 47.8 6.8 54 167-221 3-70 (418)
369 PRK08263 short chain dehydroge 94.1 0.13 2.8E-06 44.7 6.0 35 166-200 2-36 (275)
370 PF00070 Pyr_redox: Pyridine n 94.1 0.11 2.5E-06 37.1 4.7 32 169-201 1-32 (80)
371 PRK08655 prephenate dehydrogen 94.1 0.14 3.1E-06 48.7 6.7 51 169-220 2-68 (437)
372 PLN02778 3,5-epimerase/4-reduc 94.1 0.18 3.9E-06 45.0 7.1 56 167-222 9-69 (298)
373 PRK07326 short chain dehydroge 94.0 0.094 2E-06 44.1 5.0 35 165-199 4-38 (237)
374 TIGR03466 HpnA hopanoid-associ 94.0 0.12 2.5E-06 45.6 5.7 54 168-221 1-75 (328)
375 PLN02214 cinnamoyl-CoA reducta 94.0 0.16 3.4E-06 46.2 6.7 35 165-199 8-42 (342)
376 PRK07806 short chain dehydroge 94.0 0.099 2.1E-06 44.3 5.0 36 165-200 4-39 (248)
377 PRK07577 short chain dehydroge 94.0 0.1 2.2E-06 43.7 5.1 35 166-200 2-36 (234)
378 PRK06181 short chain dehydroge 94.0 0.13 2.8E-06 44.2 5.7 34 167-200 1-34 (263)
379 PF01370 Epimerase: NAD depend 93.9 0.13 2.8E-06 43.0 5.5 52 170-221 1-76 (236)
380 PRK06079 enoyl-(acyl carrier p 93.9 0.093 2E-06 45.3 4.8 35 165-199 5-41 (252)
381 PRK09620 hypothetical protein; 93.9 0.19 4.2E-06 43.8 6.7 60 165-224 1-101 (229)
382 COG0078 ArgF Ornithine carbamo 93.9 0.36 7.7E-06 44.1 8.5 155 40-218 45-229 (310)
383 PRK06113 7-alpha-hydroxysteroi 93.9 0.085 1.9E-06 45.2 4.5 36 164-199 8-43 (255)
384 PRK06701 short chain dehydroge 93.9 0.11 2.4E-06 46.0 5.3 38 163-200 42-79 (290)
385 PRK08594 enoyl-(acyl carrier p 93.9 0.12 2.6E-06 44.8 5.4 36 164-199 4-41 (257)
386 TIGR01318 gltD_gamma_fam gluta 93.8 0.2 4.4E-06 47.8 7.3 35 165-200 139-173 (467)
387 PRK12936 3-ketoacyl-(acyl-carr 93.8 0.093 2E-06 44.2 4.6 36 164-199 3-38 (245)
388 PRK05993 short chain dehydroge 93.8 0.083 1.8E-06 46.1 4.4 35 166-200 3-37 (277)
389 TIGR01777 yfcH conserved hypot 93.8 0.15 3.2E-06 44.2 5.9 54 170-223 1-70 (292)
390 PRK09599 6-phosphogluconate de 93.8 0.19 4.1E-06 45.1 6.7 52 169-221 2-70 (301)
391 PRK06914 short chain dehydroge 93.8 0.091 2E-06 45.6 4.6 34 166-199 2-35 (280)
392 PRK07533 enoyl-(acyl carrier p 93.8 0.11 2.3E-06 45.0 5.0 38 163-200 6-45 (258)
393 PF01113 DapB_N: Dihydrodipico 93.8 0.19 4.2E-06 39.4 6.0 50 169-218 2-75 (124)
394 PRK11303 DNA-binding transcrip 93.8 2.3 4.9E-05 37.5 13.6 93 10-105 19-125 (328)
395 COG0604 Qor NADPH:quinone redu 93.8 0.14 3E-06 46.9 5.8 51 147-197 123-173 (326)
396 PRK08507 prephenate dehydrogen 93.8 0.18 4E-06 44.5 6.5 51 169-221 2-69 (275)
397 PRK07677 short chain dehydroge 93.8 0.084 1.8E-06 45.2 4.2 34 167-200 1-34 (252)
398 PRK06522 2-dehydropantoate 2-r 93.8 0.17 3.8E-06 44.6 6.4 30 169-199 2-31 (304)
399 cd08294 leukotriene_B4_DH_like 93.8 0.33 7.1E-06 42.8 8.1 52 147-198 124-175 (329)
400 cd08230 glucose_DH Glucose deh 93.8 0.16 3.6E-06 45.9 6.3 57 165-222 171-250 (355)
401 cd05294 LDH-like_MDH_nadp A la 93.8 0.17 3.7E-06 45.9 6.4 55 168-223 1-85 (309)
402 PLN03209 translocon at the inn 93.8 0.13 2.8E-06 50.8 6.0 35 165-199 78-112 (576)
403 PRK15057 UDP-glucose 6-dehydro 93.7 0.12 2.5E-06 48.6 5.4 51 169-221 2-84 (388)
404 TIGR03376 glycerol3P_DH glycer 93.7 0.13 2.8E-06 47.6 5.6 51 169-220 1-92 (342)
405 PRK06197 short chain dehydroge 93.7 0.097 2.1E-06 46.4 4.7 36 164-199 13-48 (306)
406 PRK12744 short chain dehydroge 93.7 0.12 2.5E-06 44.4 5.0 34 164-197 5-38 (257)
407 PRK07878 molybdopterin biosynt 93.7 0.11 2.5E-06 48.6 5.2 35 164-199 39-74 (392)
408 PLN02602 lactate dehydrogenase 93.7 0.2 4.4E-06 46.4 6.8 54 168-222 38-117 (350)
409 PRK12921 2-dehydropantoate 2-r 93.6 0.15 3.2E-06 45.2 5.7 30 169-199 2-31 (305)
410 PF02423 OCD_Mu_crystall: Orni 93.6 0.16 3.6E-06 46.1 6.0 61 168-229 129-214 (313)
411 PRK07411 hypothetical protein; 93.6 0.12 2.7E-06 48.4 5.3 35 164-199 35-70 (390)
412 PRK07680 late competence prote 93.6 0.19 4.1E-06 44.4 6.2 50 169-219 2-71 (273)
413 PRK08267 short chain dehydroge 93.5 0.087 1.9E-06 45.2 3.9 32 168-199 2-33 (260)
414 PF04321 RmlD_sub_bind: RmlD s 93.5 0.14 3.1E-06 45.6 5.4 52 169-220 2-61 (286)
415 PRK05086 malate dehydrogenase; 93.5 0.23 5E-06 45.2 6.8 56 168-223 1-82 (312)
416 PRK07109 short chain dehydroge 93.5 0.089 1.9E-06 47.8 4.1 37 164-200 5-41 (334)
417 PRK07985 oxidoreductase; Provi 93.5 0.12 2.6E-06 45.8 4.9 36 164-199 46-81 (294)
418 TIGR02371 ala_DH_arch alanine 93.5 0.26 5.7E-06 45.0 7.2 63 166-229 127-212 (325)
419 COG0771 MurD UDP-N-acetylmuram 93.5 0.19 4.1E-06 48.2 6.5 57 165-222 5-81 (448)
420 PRK06128 oxidoreductase; Provi 93.5 0.12 2.7E-06 45.8 4.8 35 164-198 52-86 (300)
421 PRK08945 putative oxoacyl-(acy 93.4 0.12 2.6E-06 43.9 4.7 37 164-200 9-45 (247)
422 COG2072 TrkA Predicted flavopr 93.4 0.1 2.2E-06 49.7 4.5 37 163-200 171-207 (443)
423 TIGR00872 gnd_rel 6-phosphoglu 93.4 0.13 2.9E-06 46.1 5.1 52 169-221 2-70 (298)
424 PRK08220 2,3-dihydroxybenzoate 93.4 0.14 3E-06 43.4 5.0 37 164-200 5-41 (252)
425 PRK08303 short chain dehydroge 93.4 0.13 2.8E-06 46.2 4.9 37 164-200 5-41 (305)
426 PF00208 ELFV_dehydrog: Glutam 93.4 0.18 3.9E-06 44.4 5.7 50 147-197 7-61 (244)
427 PLN02653 GDP-mannose 4,6-dehyd 93.4 0.13 2.9E-06 46.2 5.0 35 164-198 3-37 (340)
428 PRK12935 acetoacetyl-CoA reduc 93.3 0.16 3.5E-06 43.0 5.2 36 164-199 3-38 (247)
429 cd01487 E1_ThiF_like E1_ThiF_l 93.3 0.17 3.8E-06 42.0 5.3 31 169-200 1-32 (174)
430 PTZ00188 adrenodoxin reductase 93.3 0.29 6.2E-06 47.7 7.4 57 166-223 38-139 (506)
431 PRK10401 DNA-binding transcrip 93.3 1.9 4.2E-05 38.5 12.5 89 10-105 20-123 (346)
432 PRK06720 hypothetical protein; 93.3 0.13 2.9E-06 42.5 4.5 36 164-199 13-48 (169)
433 PLN02206 UDP-glucuronate decar 93.3 0.24 5.2E-06 47.1 6.8 37 163-199 115-151 (442)
434 PRK12746 short chain dehydroge 93.3 0.16 3.5E-06 43.2 5.2 34 164-197 3-36 (254)
435 COG0059 IlvC Ketol-acid reduct 93.3 0.21 4.5E-06 45.8 6.0 54 165-219 16-83 (338)
436 COG0334 GdhA Glutamate dehydro 93.2 0.22 4.8E-06 47.2 6.3 53 146-199 182-238 (411)
437 PLN02514 cinnamyl-alcohol dehy 93.2 0.3 6.6E-06 44.4 7.2 52 147-199 161-212 (357)
438 KOG0409 Predicted dehydrogenas 93.2 0.22 4.8E-06 45.5 6.1 59 164-223 32-104 (327)
439 PRK12491 pyrroline-5-carboxyla 93.2 0.17 3.6E-06 45.2 5.3 51 168-219 3-72 (272)
440 PRK09526 lacI lac repressor; R 93.2 0.85 1.8E-05 40.5 9.8 93 10-108 24-131 (342)
441 PRK07102 short chain dehydroge 93.2 0.11 2.3E-06 44.1 3.9 34 167-200 1-34 (243)
442 PLN00106 malate dehydrogenase 93.1 0.36 7.8E-06 44.3 7.5 58 166-223 17-99 (323)
443 COG0039 Mdh Malate/lactate deh 93.1 0.26 5.7E-06 45.1 6.5 54 168-222 1-81 (313)
444 PRK12384 sorbitol-6-phosphate 93.1 0.13 2.9E-06 43.9 4.4 34 167-200 2-35 (259)
445 PRK07791 short chain dehydroge 93.1 0.16 3.4E-06 44.9 4.9 35 165-199 4-38 (286)
446 PRK06505 enoyl-(acyl carrier p 93.1 0.15 3.2E-06 44.7 4.8 35 165-199 5-41 (271)
447 PLN02178 cinnamyl-alcohol dehy 93.1 0.38 8.3E-06 44.4 7.7 75 147-222 158-254 (375)
448 COG0240 GpsA Glycerol-3-phosph 93.1 0.18 4E-06 46.5 5.4 53 168-221 2-82 (329)
449 PRK11880 pyrroline-5-carboxyla 93.1 0.21 4.6E-06 43.6 5.6 52 168-220 3-72 (267)
450 PLN03154 putative allyl alcoho 93.0 0.34 7.4E-06 44.1 7.1 52 147-198 139-190 (348)
451 cd01337 MDH_glyoxysomal_mitoch 93.0 0.23 5E-06 45.3 6.0 54 169-222 2-80 (310)
452 PRK06180 short chain dehydroge 93.0 0.13 2.9E-06 44.8 4.3 35 166-200 3-37 (277)
453 cd08292 ETR_like_2 2-enoyl thi 93.0 0.56 1.2E-05 41.1 8.3 51 147-198 121-171 (324)
454 PRK12938 acetyacetyl-CoA reduc 93.0 0.18 4E-06 42.6 5.1 33 165-197 1-33 (246)
455 PRK07831 short chain dehydroge 93.0 0.15 3.2E-06 43.9 4.5 37 164-200 14-51 (262)
456 PRK06823 ornithine cyclodeamin 93.0 0.21 4.6E-06 45.6 5.7 27 203-229 185-212 (315)
457 PRK07024 short chain dehydroge 93.0 0.12 2.5E-06 44.5 3.8 34 167-200 2-35 (257)
458 cd08295 double_bond_reductase_ 92.9 0.36 7.8E-06 43.2 7.1 52 147-198 132-183 (338)
459 PRK08177 short chain dehydroge 92.9 0.2 4.4E-06 42.1 5.2 33 168-200 2-34 (225)
460 PRK08324 short chain dehydroge 92.9 0.18 3.9E-06 50.4 5.6 37 164-200 419-455 (681)
461 PRK06483 dihydromonapterin red 92.9 0.18 4E-06 42.5 4.9 34 167-200 2-35 (236)
462 PLN02780 ketoreductase/ oxidor 92.9 0.1 2.2E-06 47.3 3.5 35 166-200 52-86 (320)
463 PRK07889 enoyl-(acyl carrier p 92.9 0.17 3.8E-06 43.7 4.8 35 165-199 5-41 (256)
464 PRK12825 fabG 3-ketoacyl-(acyl 92.8 0.19 4E-06 42.1 4.8 32 165-196 4-35 (249)
465 PRK12747 short chain dehydroge 92.8 0.2 4.4E-06 42.7 5.0 34 165-198 2-35 (252)
466 cd08239 THR_DH_like L-threonin 92.7 0.39 8.4E-06 42.9 7.0 52 146-199 144-196 (339)
467 PRK03806 murD UDP-N-acetylmura 92.7 0.37 8E-06 45.2 7.1 56 165-221 4-76 (438)
468 PLN02240 UDP-glucose 4-epimera 92.7 0.2 4.3E-06 45.0 5.0 35 164-198 2-36 (352)
469 PRK09496 trkA potassium transp 92.6 0.44 9.6E-06 44.6 7.5 54 145-199 208-262 (453)
470 PRK07454 short chain dehydroge 92.6 0.2 4.3E-06 42.4 4.8 35 166-200 5-39 (241)
471 TIGR02417 fruct_sucro_rep D-fr 92.6 1 2.2E-05 39.9 9.4 88 10-104 18-123 (327)
472 PRK12778 putative bifunctional 92.6 0.44 9.6E-06 48.2 7.9 34 165-199 429-462 (752)
473 PRK08063 enoyl-(acyl carrier p 92.6 0.19 4.2E-06 42.5 4.6 33 165-197 2-34 (250)
474 cd08281 liver_ADH_like1 Zinc-d 92.6 0.61 1.3E-05 42.6 8.2 51 147-199 172-224 (371)
475 PRK07453 protochlorophyllide o 92.5 0.15 3.3E-06 45.6 4.1 35 165-199 4-38 (322)
476 TIGR01087 murD UDP-N-acetylmur 92.5 0.27 5.9E-06 46.0 5.9 52 169-221 1-73 (433)
477 COG1028 FabG Dehydrogenases wi 92.5 0.24 5.2E-06 42.1 5.1 39 164-202 2-40 (251)
478 PRK05855 short chain dehydroge 92.5 0.26 5.6E-06 46.9 5.8 37 164-200 312-348 (582)
479 cd01338 MDH_choloroplast_like 92.5 0.38 8.2E-06 44.1 6.7 55 168-222 3-90 (322)
480 PLN02858 fructose-bisphosphate 92.5 0.25 5.4E-06 53.5 6.2 56 166-222 3-72 (1378)
481 PLN02353 probable UDP-glucose 92.5 0.27 5.8E-06 47.5 5.9 54 168-222 2-90 (473)
482 PRK07074 short chain dehydroge 92.5 0.17 3.7E-06 43.2 4.2 34 167-200 2-35 (257)
483 TIGR03026 NDP-sugDHase nucleot 92.4 0.51 1.1E-05 44.2 7.7 61 164-224 310-390 (411)
484 PRK06300 enoyl-(acyl carrier p 92.4 0.21 4.6E-06 45.0 4.9 35 163-197 4-40 (299)
485 PLN02572 UDP-sulfoquinovose sy 92.4 0.18 4E-06 47.8 4.7 35 164-198 44-78 (442)
486 PRK09880 L-idonate 5-dehydroge 92.4 0.57 1.2E-05 42.2 7.7 65 156-222 160-247 (343)
487 PRK14806 bifunctional cyclohex 92.4 0.3 6.6E-06 49.0 6.5 52 168-220 4-73 (735)
488 PRK06928 pyrroline-5-carboxyla 92.4 0.3 6.5E-06 43.4 5.8 51 168-219 2-73 (277)
489 TIGR02415 23BDH acetoin reduct 92.4 0.16 3.6E-06 43.1 3.9 33 168-200 1-33 (254)
490 TIGR03451 mycoS_dep_FDH mycoth 92.4 0.61 1.3E-05 42.3 7.9 52 147-199 157-209 (358)
491 TIGR01202 bchC 2-desacetyl-2-h 92.4 0.45 9.8E-06 42.4 6.9 58 165-223 143-213 (308)
492 KOG0023 Alcohol dehydrogenase, 92.3 0.41 8.9E-06 44.3 6.6 72 149-222 165-238 (360)
493 PRK04148 hypothetical protein; 92.3 0.45 9.7E-06 38.5 6.1 43 156-200 6-48 (134)
494 PRK12814 putative NADPH-depend 92.3 0.39 8.4E-06 47.9 7.0 34 166-200 192-225 (652)
495 PRK14874 aspartate-semialdehyd 92.3 0.31 6.8E-06 44.6 5.9 54 167-220 1-73 (334)
496 PLN02852 ferredoxin-NADP+ redu 92.3 0.38 8.2E-06 46.7 6.7 35 165-200 24-60 (491)
497 PLN02583 cinnamoyl-CoA reducta 92.2 0.24 5.2E-06 44.0 5.0 36 164-199 3-38 (297)
498 PTZ00345 glycerol-3-phosphate 92.2 0.36 7.8E-06 45.1 6.3 52 168-220 12-103 (365)
499 PRK09987 dTDP-4-dehydrorhamnos 92.2 0.29 6.2E-06 43.5 5.5 53 168-221 1-65 (299)
500 PLN02858 fructose-bisphosphate 92.2 0.24 5.3E-06 53.5 5.8 55 167-222 324-392 (1378)
No 1
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=100.00 E-value=2.4e-74 Score=515.93 Aligned_cols=229 Identities=85% Similarity=1.239 Sum_probs=222.1
Q ss_pred CCCCccchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCC
Q 027064 1 MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQV 80 (229)
Q Consensus 1 ~~~~~~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~ 80 (229)
|+.|..-|+.+|||+++|++++++++++++.|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||+++
T Consensus 1 ~~~~~~~~~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~ 80 (299)
T PLN02516 1 MASPSDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENI 80 (299)
T ss_pred CCCCccccCeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCC
Confidence 77777778889999999999999999999999988789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHH
Q 027064 81 SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR 160 (229)
Q Consensus 81 ~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~ 160 (229)
+++||++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.++..++|+||||+||++||++
T Consensus 81 s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~ 160 (299)
T PLN02516 81 SEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSR 160 (299)
T ss_pred CHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998643578999999999999999
Q ss_pred hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 161 SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 161 ~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+++++||+|+|||||.+||||+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus 161 ~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~v 229 (299)
T PLN02516 161 SGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWI 229 (299)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 2
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.2e-74 Score=513.91 Aligned_cols=221 Identities=43% Similarity=0.701 Sum_probs=215.8
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+++|+||++|++|++++++++++|+++++++|+||+|++|+||+|..|+++|.|.|+++||++++++||+++++++|++
T Consensus 1 ~~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~ 80 (288)
T PRK14171 1 MNNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLIS 80 (288)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 46799999999999999999999999887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||++||++|+++++|
T Consensus 81 ~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~G 159 (288)
T PRK14171 81 KINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTG 159 (288)
T ss_pred HHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999999999999999999999999883 3789999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus 160 K~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~v 221 (288)
T PRK14171 160 KNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYF 221 (288)
T ss_pred CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 3
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.3e-74 Score=513.25 Aligned_cols=222 Identities=43% Similarity=0.673 Sum_probs=215.9
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+++|||+++|++|+++++++++.|++++|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|++|++
T Consensus 1 ~~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~ 80 (294)
T PRK14187 1 ETNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIE 80 (294)
T ss_pred CcEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 46789999999999999999999998877899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||++||++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~G 160 (294)
T PRK14187 81 KINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSG 160 (294)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998533689999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus 161 k~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~i 222 (294)
T PRK14187 161 SDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWI 222 (294)
T ss_pred CEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999996
No 4
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.2e-74 Score=511.22 Aligned_cols=219 Identities=53% Similarity=0.844 Sum_probs=214.8
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+++|+|+++|++++++++++++.|+++ |++|+|++|++|+|++|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 1 ~~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 79 (284)
T PRK14170 1 MGEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLS 79 (284)
T ss_pred CCeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 5789999999999999999999999887 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||++||++|+++++|
T Consensus 80 ~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G 157 (284)
T PRK14170 80 VVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEG 157 (284)
T ss_pred HHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 5789999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus 158 k~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~v 219 (284)
T PRK14170 158 KRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYI 219 (284)
T ss_pred CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 5
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=100.00 E-value=8.5e-74 Score=505.75 Aligned_cols=218 Identities=55% Similarity=0.870 Sum_probs=214.4
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++|||+++|++++++++++++.++++.++.|+|++|++|+||+|..|+++|.|+|+++||.++.++||++++++||++.|
T Consensus 1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I 80 (283)
T COG0190 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI 80 (283)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence 37999999999999999999999998789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
.+||+|++|||||||+|||+|+|+++++++|+|+||||||||+|+|+|+.+ ++.|+||||.||++||++|+++++||+
T Consensus 81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~ 158 (283)
T COG0190 81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN 158 (283)
T ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999987 788999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||++||||++.||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus 159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~v 218 (283)
T COG0190 159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMV 218 (283)
T ss_pred EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999997
No 6
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.6e-74 Score=509.94 Aligned_cols=221 Identities=44% Similarity=0.725 Sum_probs=215.9
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
|.+.+||||++|++|++++++++++|+++++.+|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++||+
T Consensus 1 ~~~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~ 80 (284)
T PRK14177 1 MSPILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELL 80 (284)
T ss_pred CCCeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44689999999999999999999999988778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~ 158 (284)
T PRK14177 81 GVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVT 158 (284)
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus 159 Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~i 221 (284)
T PRK14177 159 GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWI 221 (284)
T ss_pred CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 7
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=7.8e-74 Score=521.33 Aligned_cols=224 Identities=61% Similarity=1.009 Sum_probs=217.5
Q ss_pred cchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064 6 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL 85 (229)
Q Consensus 6 ~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el 85 (229)
.|++++|||+++|++|+++++++++.|+++.+++|+||+|++|+||+|..|+++|+|+|+++||+++.++||++++|+||
T Consensus 70 ~~~~~ildGk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~el 149 (364)
T PLN02616 70 EGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEV 149 (364)
T ss_pred cccCeEeEhHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence 44578999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064 86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI 165 (229)
Q Consensus 86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l 165 (229)
++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.++..+.|+||||.||++||++|++++
T Consensus 150 l~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l 229 (364)
T PLN02616 150 LKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEI 229 (364)
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999864357899999999999999999999
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+||+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus 230 ~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~v 293 (364)
T PLN02616 230 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWI 293 (364)
T ss_pred CCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999996
No 8
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=9.9e-74 Score=518.55 Aligned_cols=224 Identities=60% Similarity=0.976 Sum_probs=217.2
Q ss_pred cchhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064 6 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL 85 (229)
Q Consensus 6 ~~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el 85 (229)
.+|+++||||++|++|+++++++++.++++.+++|+||+|+||+||+|..|+++|+|+|+++||+++.++||++++|+||
T Consensus 53 ~~~~~ildGk~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~el 132 (345)
T PLN02897 53 EQKTVVIDGNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQI 132 (345)
T ss_pred cccceEeehHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHH
Confidence 34678999999999999999999999998878999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064 86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI 165 (229)
Q Consensus 86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l 165 (229)
++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.++..+.|+||||.||++||++|++++
T Consensus 133 l~~I~~lN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l 212 (345)
T PLN02897 133 LSALRKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEI 212 (345)
T ss_pred HHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999864347899999999999999999999
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+||+|+|||||.+||+|+|+||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus 213 ~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~v 276 (345)
T PLN02897 213 AGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWL 276 (345)
T ss_pred CCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999996
No 9
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-73 Score=507.02 Aligned_cols=220 Identities=40% Similarity=0.647 Sum_probs=213.7
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+++||||++|+++++++++++++++++...+|+|++|++|+||+|..|+++|.|+|+++||++++++||++++++||++
T Consensus 1 ~~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (278)
T PRK14172 1 MGQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLIN 80 (278)
T ss_pred CCeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 46799999999999999999999998873356999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||+||++||++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~G 158 (278)
T PRK14172 81 EIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEG 158 (278)
T ss_pred HHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 6789999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus 159 k~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~i 220 (278)
T PRK14172 159 KEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYV 220 (278)
T ss_pred CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 10
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.9e-73 Score=506.82 Aligned_cols=218 Identities=41% Similarity=0.704 Sum_probs=213.8
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHH
Q 027064 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISK 88 (229)
Q Consensus 9 ~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 88 (229)
+.+|+||++|++++++++++++.|+++ |++|+|++|++|+|++|..|+++|.|+|+++||++++++||++++|+||++.
T Consensus 1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 79 (282)
T PRK14169 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK 79 (282)
T ss_pred CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 468999999999999999999999877 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Q 027064 89 VHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGK 168 (229)
Q Consensus 89 I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk 168 (229)
|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.+ .++|+||||+||++||++|+++++||
T Consensus 80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 157 (282)
T PRK14169 80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK 157 (282)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 68899999999999999999999999
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus 158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~v 218 (282)
T PRK14169 158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAV 218 (282)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 11
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.1e-73 Score=506.64 Aligned_cols=218 Identities=45% Similarity=0.733 Sum_probs=212.8
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++||||++|++|+++++++++.|+++ |++|+|++|++|+||+|..|+++|.|.|+++||+++.++||++++++||++.|
T Consensus 2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14166 2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI 80 (282)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 37999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||++||++|+++++||+
T Consensus 81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~ 159 (282)
T PRK14166 81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD 159 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999873 468999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||||+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus 160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~v 219 (282)
T PRK14166 160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMV 219 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999986
No 12
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-73 Score=510.14 Aligned_cols=223 Identities=46% Similarity=0.745 Sum_probs=216.5
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+.+||||++|++|+++++++++.+++++|++|+|++|++|+||+|..|+++|+|+|+++||+++.++||++++|+||+
T Consensus 1 m~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~ 80 (297)
T PRK14168 1 MSAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELL 80 (297)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 45679999999999999999999999988789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||++||++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~ 160 (297)
T PRK14168 81 ALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETS 160 (297)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999853378999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+|+||+++ |||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus 161 Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~i 227 (297)
T PRK14168 161 GAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWI 227 (297)
T ss_pred CCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence 999999999999999999999998 899999999999999999999999999999999999996
No 13
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.6e-73 Score=506.40 Aligned_cols=220 Identities=47% Similarity=0.783 Sum_probs=214.5
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+.+|+||++|++++++++++++.++++ |++|+||+|++|+|++|..|+++|.|+|+++||+++.++||++++++||+
T Consensus 1 ~~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~ 79 (284)
T PRK14193 1 MTAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELN 79 (284)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 45679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||++||++|+++++
T Consensus 80 ~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~ 157 (284)
T PRK14193 80 AVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELA 157 (284)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999988 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+++||++ +|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus 158 Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~i 222 (284)
T PRK14193 158 GAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMV 222 (284)
T ss_pred CCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHc
Confidence 99999999999999999999998 8999999999999999999999999999999999999986
No 14
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.7e-73 Score=505.63 Aligned_cols=216 Identities=50% Similarity=0.775 Sum_probs=211.7
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH 90 (229)
Q Consensus 11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~ 90 (229)
+|||+++|++++++++++++.|+++ |++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+++++.|+
T Consensus 3 ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~ 81 (282)
T PRK14182 3 LIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIA 81 (282)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999999877 899999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCC-cccCCHHHHHHHHHHhCCCCCCCe
Q 027064 91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPL-FLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~-~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
+||+|++|||||||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.| .+. |+||||+||++||++|+++++||+
T Consensus 82 ~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk~ 159 (282)
T PRK14182 82 RLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGKR 159 (282)
T ss_pred HHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999998 455 899999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus 160 vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~i 219 (282)
T PRK14182 160 ALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWV 219 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999986
No 15
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.6e-73 Score=505.87 Aligned_cols=221 Identities=43% Similarity=0.742 Sum_probs=216.2
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
.|+++|||+++|++|+++++++++.++++.|++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++++||+
T Consensus 6 ~~~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~ 85 (287)
T PRK14176 6 YESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELL 85 (287)
T ss_pred cceEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 46789999999999999999999999887789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++
T Consensus 86 ~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~ 163 (287)
T PRK14176 86 ELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIE 163 (287)
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+++||+++|||||+||++|+|+.+++++|||||+|+|+|+||+++||
T Consensus 164 Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~v 226 (287)
T PRK14176 164 GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMV 226 (287)
T ss_pred CCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 16
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.9e-73 Score=508.84 Aligned_cols=219 Identities=46% Similarity=0.785 Sum_probs=214.3
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+++|+|+++|++++++++++++.|+++ |++|+||+|++|+||+|..|+++|+|+|+++||++++++||++++++||++
T Consensus 1 ~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~ 79 (297)
T PRK14167 1 MTEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYD 79 (297)
T ss_pred CCeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 5689999999999999999999999876 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||++||++|+++++|
T Consensus 80 ~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~G 157 (297)
T PRK14167 80 TIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEG 157 (297)
T ss_pred HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 5789999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||.+||||+|+||+++ |||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus 158 k~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~i 223 (297)
T PRK14167 158 ADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSML 223 (297)
T ss_pred CEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 99999999999999999999998 899999999999999999999999999999999999986
No 17
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3e-73 Score=506.33 Aligned_cols=220 Identities=51% Similarity=0.814 Sum_probs=215.6
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+.+|+|+++|++++++++++++.|+++ +++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 ~~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 79 (284)
T PRK14190 1 MMAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELL 79 (284)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 67789999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~ 157 (284)
T PRK14190 80 ALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDIS 157 (284)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 678999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+|+||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus 158 Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~i 220 (284)
T PRK14190 158 GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMV 220 (284)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 18
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.8e-73 Score=508.12 Aligned_cols=220 Identities=48% Similarity=0.745 Sum_probs=215.4
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+.+|||+++|++++++++++++.++++++++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus 1 ~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (297)
T PRK14186 1 MALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEA 80 (297)
T ss_pred CCEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 56799999999999999999999998887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .+.|+||||+||++||++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~G 158 (297)
T PRK14186 81 LIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAG 158 (297)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999988 5789999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus 159 k~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~i 220 (297)
T PRK14186 159 KKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMV 220 (297)
T ss_pred CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 19
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.6e-73 Score=507.13 Aligned_cols=218 Identities=49% Similarity=0.763 Sum_probs=213.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++|||+++|++++++++++++.|+++.+++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (293)
T PRK14185 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV 81 (293)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~ 159 (293)
T PRK14185 82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK 159 (293)
T ss_pred HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999998 588999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||+|+++||+++ |||||+|||+|+|+.+++++|||||+|+|+|+||++|||
T Consensus 160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~v 223 (293)
T PRK14185 160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMV 223 (293)
T ss_pred EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 999999999999999999998 799999999999999999999999999999999999996
No 20
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.2e-73 Score=504.68 Aligned_cols=217 Identities=44% Similarity=0.699 Sum_probs=211.4
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
|++.+|+|+++|++|+++++++++.+ +++|+||+|++|+|++|..|+++|.|+|+++||++++++||++++|+||+
T Consensus 1 m~~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~ 76 (287)
T PRK14173 1 MAARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELL 76 (287)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 45679999999999999999999987 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||||+.|+|+|+.| .+.|+||||+||++||++|+++++
T Consensus 77 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~ 154 (287)
T PRK14173 77 ELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLA 154 (287)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+|+++|||
T Consensus 155 Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~v 217 (287)
T PRK14173 155 GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMV 217 (287)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 21
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.9e-73 Score=501.77 Aligned_cols=218 Identities=45% Similarity=0.761 Sum_probs=213.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++||||++|++|+++++++++.|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+++++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (281)
T PRK14183 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI 81 (281)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999873489999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||+||++||++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (281)
T PRK14183 82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD 159 (281)
T ss_pred HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999998 688999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||+|+|+||+++|||||+|||+|+++.+++++|||||+|+|+|+||+++||
T Consensus 160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~v 219 (281)
T PRK14183 160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMV 219 (281)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999996
No 22
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9e-73 Score=503.20 Aligned_cols=221 Identities=51% Similarity=0.780 Sum_probs=215.6
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+.+|||+++|++++++++++++.|+++.+++|+|++|++|+||+|..|+++|.|+|+++||++++++||++++|+||+
T Consensus 1 M~~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~ 80 (285)
T PRK10792 1 MTAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELL 80 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 45679999999999999999999999988778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~ 158 (285)
T PRK10792 81 ALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTY 158 (285)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999988 678999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|+++||+++|||||+|||+|+++.+++++|||||+|+|+|++|+.+||
T Consensus 159 Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~v 221 (285)
T PRK10792 159 GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWI 221 (285)
T ss_pred CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999886
No 23
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-72 Score=502.03 Aligned_cols=219 Identities=45% Similarity=0.730 Sum_probs=213.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
.+||||++|++|+++++++++.|+++.|++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++++||++.|
T Consensus 2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (282)
T PRK14180 2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI 81 (282)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 37999999999999999999999887789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|+ .++|+||||+||++||++|+++++||+
T Consensus 82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~ 160 (282)
T PRK14180 82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY 160 (282)
T ss_pred HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999883 378999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||+|+++||+++|||||+|||+|+|+.+++++|||||+|+|+|+||+++||
T Consensus 161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~v 220 (282)
T PRK14180 161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMV 220 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999986
No 24
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.6e-72 Score=500.49 Aligned_cols=218 Identities=49% Similarity=0.780 Sum_probs=213.8
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++||||++|++|+++++++++.|+++++++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (286)
T PRK14184 2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI 81 (286)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||++||++|+++++||+
T Consensus 82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~ 159 (286)
T PRK14184 82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK 159 (286)
T ss_pred HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999998 578999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhh----CCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~----~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||+|+++||++ +|||||+||++|+++.+++++|||||+|+|+|+||+++||
T Consensus 160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~v 223 (286)
T PRK14184 160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMV 223 (286)
T ss_pred EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHc
Confidence 99999999999999999999 8999999999999999999999999999999999999986
No 25
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.5e-72 Score=498.82 Aligned_cols=214 Identities=41% Similarity=0.749 Sum_probs=209.0
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH 90 (229)
Q Consensus 11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~ 90 (229)
+||||++|++++++++++++.| +++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus 2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~ 77 (287)
T PRK14181 2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH 77 (287)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 6999999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeE
Q 027064 91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRA 170 (229)
Q Consensus 91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v 170 (229)
+||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||++||++|+++++||+|
T Consensus 78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v 156 (287)
T PRK14181 78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV 156 (287)
T ss_pred HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence 999999999999999999999999999999999999999999999999984 3679999999999999999999999999
Q ss_pred EEEccchhhhHHHHHHHhhC----CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 171 VVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 171 ~ViG~s~~VG~pla~~L~~~----~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+|||||.+||||+++||+++ |||||+|||+|+++.+++++|||||+|+|+|+||++|||
T Consensus 157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~i 219 (287)
T PRK14181 157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMI 219 (287)
T ss_pred EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHc
Confidence 99999999999999999999 899999999999999999999999999999999999996
No 26
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.7e-72 Score=497.16 Aligned_cols=220 Identities=49% Similarity=0.815 Sum_probs=214.8
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+++||||++|++|+++++++++.|+++ |++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++++||+
T Consensus 1 M~~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~ 79 (285)
T PRK14189 1 MTAQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELL 79 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 45679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+++.+ .+.|+||||+||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 157 (285)
T PRK14189 80 ARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLR 157 (285)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||.+||+|++++|+++|||||+||++|+|+.+++++|||||+|+|+|+||+++|+
T Consensus 158 Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~i 220 (285)
T PRK14189 158 GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMV 220 (285)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999886
No 27
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-71 Score=495.47 Aligned_cols=218 Identities=44% Similarity=0.726 Sum_probs=213.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++|+||++|++|+++++++++.|+++.|++|+|++|++|+|++|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (285)
T PRK14191 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI 81 (285)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999999887789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCe
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKR 169 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~ 169 (229)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (285)
T PRK14191 82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD 159 (285)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999998 678999999999999999999999999
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|||||.+||+|+|++|+++|||||+||++|+++.+++++|||||+|+|+|+|++++||
T Consensus 160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~v 219 (285)
T PRK14191 160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMV 219 (285)
T ss_pred EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999986
No 28
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.2e-71 Score=493.24 Aligned_cols=220 Identities=46% Similarity=0.775 Sum_probs=214.8
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+++|||+++|++++++++++++.|+++ |++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++++||+
T Consensus 1 m~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~ 79 (286)
T PRK14175 1 MVAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVL 79 (286)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 56779999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~ 157 (286)
T PRK14175 80 NELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLE 157 (286)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||++||+|+|++|.++|||||+|||+|+++.+++++|||||+|+|+|++|+++|+
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~v 220 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVV 220 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999886
No 29
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.4e-70 Score=487.72 Aligned_cols=220 Identities=49% Similarity=0.784 Sum_probs=215.1
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+++||||++|++++++++++++.+++++|++|+||+|++|+|++|..|+++|.|+|+++||++++++||++++++||++
T Consensus 1 ~~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~ 80 (284)
T PRK14179 1 MTEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLD 80 (284)
T ss_pred CCeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 46799999999999999999999999887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G 158 (284)
T PRK14179 81 LIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999988 6889999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||+|++||+|+|.+|+++|||||+||++|+++.+++++|||||+|+|+|++|+.+|+
T Consensus 159 k~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~i 220 (284)
T PRK14179 159 KHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFV 220 (284)
T ss_pred CEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999885
No 30
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.6e-70 Score=487.85 Aligned_cols=219 Identities=51% Similarity=0.785 Sum_probs=213.2
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH 90 (229)
Q Consensus 11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~ 90 (229)
+|+|+++|++++++++++++.|+++.|++|+||+|++|+||+|..|+++|.|+|+++||++++++||++++|+||++.|+
T Consensus 3 il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~ 82 (295)
T PRK14174 3 IIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIE 82 (295)
T ss_pred EEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 79999999999999999999998877899999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeE
Q 027064 91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRA 170 (229)
Q Consensus 91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v 170 (229)
+||+|++|||||||+|||+|+|++.++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++||+|
T Consensus 83 ~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~v 162 (295)
T PRK14174 83 DLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHC 162 (295)
T ss_pred HHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEE
Confidence 99999999999999999999999999999999999999999999999988434789999999999999999999999999
Q ss_pred EEEccchhhhHHHHHHHhh----CCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 171 VVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 171 ~ViG~s~~VG~pla~~L~~----~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+|||||.+||+|+++||++ +|+||++||++|.++.+++++|||||+|+|+|+||+++||
T Consensus 163 vViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~v 225 (295)
T PRK14174 163 VVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMV 225 (295)
T ss_pred EEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHc
Confidence 9999999999999999998 7999999999999999999999999999999999999986
No 31
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5e-69 Score=482.34 Aligned_cols=220 Identities=47% Similarity=0.760 Sum_probs=214.9
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+++|+||++|++++++++++++.|+++ |++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++++||+
T Consensus 2 m~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~ 80 (301)
T PRK14194 2 MSAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLL 80 (301)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 66779999999999999999999999887 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 158 (301)
T PRK14194 81 ALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLT 158 (301)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 578999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||+|++||+|+|.+|+++|+|||+||++|+++.+++++|||||+|+|+|++|+++|+
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~i 221 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWL 221 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhc
Confidence 999999999999999999999999999999999999999999999999999999999998885
No 32
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.4e-69 Score=478.28 Aligned_cols=213 Identities=50% Similarity=0.779 Sum_probs=209.1
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHH
Q 027064 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVH 90 (229)
Q Consensus 11 il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~ 90 (229)
+|||+++|++++++++++++++ +++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++||++.|+
T Consensus 2 il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~ 77 (279)
T PRK14178 2 ILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIR 77 (279)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeE
Q 027064 91 ELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRA 170 (229)
Q Consensus 91 ~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v 170 (229)
+||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++||+|
T Consensus 78 ~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V 155 (279)
T PRK14178 78 RLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRA 155 (279)
T ss_pred HHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEE
Confidence 99999999999999999999999999999999999999999999999988 5889999999999999999999999999
Q ss_pred EEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 171 VVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 171 ~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+|+|||..||+|+|++|+++|||||+|||+|+++.+++++|||||+|+|+|+||+++|+
T Consensus 156 ~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~v 214 (279)
T PRK14178 156 VVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMV 214 (279)
T ss_pred EEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999986
No 33
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.9e-67 Score=472.06 Aligned_cols=220 Identities=50% Similarity=0.773 Sum_probs=214.4
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
|+.+|||+++|++|+++++++++.|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++++||++
T Consensus 1 ~~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (296)
T PRK14188 1 MATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLA 80 (296)
T ss_pred CCEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 46789999999999999999999998877899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||++||++|+++++|
T Consensus 81 ~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~G 158 (296)
T PRK14188 81 LIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSG 158 (296)
T ss_pred HHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 6889999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+|+|||||++||+|+|.+|+++|++|++||++|+++.+++++|||||+|+|+|++|+.+|+
T Consensus 159 k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~l 220 (296)
T PRK14188 159 LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWI 220 (296)
T ss_pred CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchhee
Confidence 99999999999999999999999999999999999999999999999999999999998874
No 34
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=5.3e-65 Score=478.89 Aligned_cols=223 Identities=50% Similarity=0.789 Sum_probs=219.7
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAEL 85 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~-~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el 85 (229)
|++.||+|+.+|++++++++++++.++++. +++|.|+|||||++++|..|+|+|.|+|++.||++.+++||+++++-||
T Consensus 1 ~~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~el 80 (935)
T KOG4230|consen 1 MVAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGEL 80 (935)
T ss_pred CcchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHH
Confidence 678999999999999999999999999887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCC
Q 027064 86 ISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTI 165 (229)
Q Consensus 86 ~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l 165 (229)
+..|.+||+|+.|||||||+|||.|+|++.+.++|+|+||||||+++|.|+|..++.++.|+||||.||++||+++++.+
T Consensus 81 l~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v 160 (935)
T KOG4230|consen 81 LREIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFV 160 (935)
T ss_pred HHHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
+||++||+|||.+||.|++.+|...|+|||+|||+|+++.+++.+|||||+|+|.|+|+++||+
T Consensus 161 ~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWi 224 (935)
T KOG4230|consen 161 AGKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWI 224 (935)
T ss_pred ccceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccc
Confidence 9999999999999999999999999999999999999999999999999999999999999996
No 35
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.4e-62 Score=437.43 Aligned_cols=221 Identities=42% Similarity=0.728 Sum_probs=214.6
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHH
Q 027064 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELI 86 (229)
Q Consensus 7 ~~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 86 (229)
||+++||||++|++++++++++++.|+++.+++|+|++|++|+||+|..|++.|.++|+++||+++++.||+++++++|.
T Consensus 1 ~~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~ 80 (283)
T PRK14192 1 MMALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLL 80 (283)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence 45679999999999999999999999988789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCC
Q 027064 87 SKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIK 166 (229)
Q Consensus 87 ~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~ 166 (229)
+.|++||+|+++|||+||+|||+|++++++++.|+|.|||||+|+.|.|+++.| ++.|.||||.|++++|++|+++++
T Consensus 81 ~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~ 158 (283)
T PRK14192 81 AKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELA 158 (283)
T ss_pred HHHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999988 688999999999999999999999
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
||+|+|||||++||+|++++|+++|||||+|||+|+++.+.+++|||||+|||+|++|+.+|+
T Consensus 159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~l 221 (283)
T PRK14192 159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWI 221 (283)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999998875
No 36
>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=2e-59 Score=409.17 Aligned_cols=222 Identities=55% Similarity=0.874 Sum_probs=215.1
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHH
Q 027064 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELIS 87 (229)
Q Consensus 8 ~~~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 87 (229)
++.+++|+.+|+.+++++.++++.+++.++..|+|+.++||+||+|..|+.+|.|+|+++||.+..+.||++.+++++++
T Consensus 7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~ 86 (309)
T KOG0089|consen 7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES 86 (309)
T ss_pred ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence 47899999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCC
Q 027064 88 KVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKG 167 (229)
Q Consensus 88 ~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~g 167 (229)
.|.++|+|++||||+||+|+|.|+++++++++++|+|||||||+.|.|+|...+..+.|+||||.||+++|+++++.+.|
T Consensus 87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G 166 (309)
T KOG0089|consen 87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG 166 (309)
T ss_pred HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence 99999999999999999999999999999999999999999999999999988667889999999999999999999999
Q ss_pred CeEEEEccchhhhHHHHHHHhhC--------CCEEEEEcCCCCC--HHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKA--------DATVTIVHSHTTD--PESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~--------~atVtv~~~~t~~--l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
|+++|+|||++||+|+|++|++. +||||++||.|+. ++.+++.|||+|+|+|.|++|++|||
T Consensus 167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~I 238 (309)
T KOG0089|consen 167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMI 238 (309)
T ss_pred ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCccccccee
Confidence 99999999999999999999998 8899999999864 58999999999999999999999996
No 37
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=100.00 E-value=5.1e-37 Score=241.61 Aligned_cols=117 Identities=53% Similarity=0.807 Sum_probs=103.3
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHH
Q 027064 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKV 89 (229)
Q Consensus 10 ~il~G~~la~~i~~~i~~~~~~l~~~~~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 89 (229)
++|+|+++|++|+++++++++.|+++ |++|+|++|++|+|++|..|+++|.|.|+++||+++.+.||+++++++|++.|
T Consensus 1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i 79 (117)
T PF00763_consen 1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI 79 (117)
T ss_dssp EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence 37999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064 90 HELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127 (229)
Q Consensus 90 ~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD 127 (229)
++||+|++|||||||+|||+|+|++.++++|+|+||||
T Consensus 80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD 117 (117)
T PF00763_consen 80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD 117 (117)
T ss_dssp HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence 99999999999999999999999999999999999998
No 38
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=3.6e-36 Score=254.64 Aligned_cols=108 Identities=31% Similarity=0.479 Sum_probs=100.1
Q ss_pred ccCcccccCccchhhhhccCC-------CCCcccCCHHHHHHHHHHhCC---------CCCCCeEEEEccchhhhHHHHH
Q 027064 122 LEKDVDGFHPLNIGKLAMKGR-------DPLFLPCTPKGCLELLKRSGV---------TIKGKRAVVVGRSNIVGLPVSL 185 (229)
Q Consensus 122 p~KDVDg~~~~N~g~l~~~~~-------~~~~~PcTa~av~~lL~~~~~---------~l~gk~v~ViG~s~~VG~pla~ 185 (229)
|+|||||+|+.|+|+|+.|.. .+.|+||||+||++||++|++ +++||+|+|||||++||+|+|+
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 799999999999999998731 168999999999999999976 8999999999999999999999
Q ss_pred HHhhCCCEEEEE---------------cCCC--CC----HHhhhccCcEEEEecCCCCC-CCCCCC
Q 027064 186 LLLKADATVTIV---------------HSHT--TD----PESIVREADIVIAAAGQAMM-VTMGIL 229 (229)
Q Consensus 186 ~L~~~~atVtv~---------------~~~t--~~----l~~~~~~aDivisA~g~p~~-i~~~~v 229 (229)
||+++|||||+| |++| ++ +.+++++|||||+|+|+|+| |++|||
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~i 146 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELL 146 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHc
Confidence 999999999999 7777 46 78999999999999999999 999986
No 39
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=100.00 E-value=2.5e-33 Score=231.64 Aligned_cols=98 Identities=49% Similarity=0.846 Sum_probs=86.2
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhc
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVR 209 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~ 209 (229)
||+|+|+|+.+ ++.|+||||+||++||++|+++++||+|+|||||.+||+|+++||+++|||||+||++|++++++++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 78999999998 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEecCCCCCCCCCCC
Q 027064 210 EADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 210 ~aDivisA~g~p~~i~~~~v 229 (229)
+|||||+|+|+|+||+++||
T Consensus 79 ~ADIVVsa~G~~~~i~~~~i 98 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWI 98 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS
T ss_pred eccEEeeeeccccccccccc
Confidence 99999999999999999996
No 40
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=99.93 E-value=2.6e-26 Score=191.26 Aligned_cols=106 Identities=54% Similarity=0.892 Sum_probs=101.2
Q ss_pred ccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064 122 LEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT 201 (229)
Q Consensus 122 p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t 201 (229)
|+|||||++..|+|+++.+ ...|+||||.|++++++++..++.||+|+|||+|+++|++++.+|.++|++|+++|+++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 7899999999999999987 57899999999999999999999999999999999899999999999999999999999
Q ss_pred CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 202 TDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 ~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
.++.+.+++||+||+|||+|++|+.+|+
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~ 106 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMV 106 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHc
Confidence 9999999999999999999998887764
No 41
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=99.93 E-value=2.4e-26 Score=186.26 Aligned_cols=87 Identities=37% Similarity=0.547 Sum_probs=84.7
Q ss_pred CCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhccCcEEEEecCCCC
Q 027064 143 DPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 143 ~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~~aDivisA~g~p~ 222 (229)
.+.|+||||+|++++|++|+++++||+|+|+|||..||+|++.+|+++|++|++||++|+++.+++++|||||+|+|+|+
T Consensus 4 ~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~~ 83 (140)
T cd05212 4 TPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKPE 83 (140)
T ss_pred CCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCCC
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 027064 223 MVTMGIL 229 (229)
Q Consensus 223 ~i~~~~v 229 (229)
+|+++|+
T Consensus 84 ~i~~~~i 90 (140)
T cd05212 84 KVPTEWI 90 (140)
T ss_pred ccCHHHc
Confidence 9999986
No 42
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.50 E-value=2.8e-13 Score=121.15 Aligned_cols=169 Identities=15% Similarity=0.151 Sum_probs=125.6
Q ss_pred EEECCCcccHH-HHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-
Q 027064 45 VIVGGRKDSQS-YVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL- 122 (229)
Q Consensus 45 I~vg~~~~s~~-Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p- 122 (229)
-.+|+ |-+++ .=..-...++++|++..|..++.. +.++|.+.++.+.. ++.|++|++|++ ..++..+|.
T Consensus 9 ~liG~-Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~-~~~~l~~~~~~~~~--~~~G~nVT~P~K-----~~~~~~~d~~ 79 (282)
T TIGR01809 9 FIIGK-PIAHSRSPHLHNAGYEILGLPDKTYEFETC-SAEELKEVLSGFGP--QFGGASVTIPLK-----FAILRFADEH 79 (282)
T ss_pred EEEcC-CchhccCHHHHHHHHHHcCCCcEEEeeecC-CHHHHHHHHHhcCC--CCcEEEECCCCH-----HHHHHHhhcC
Confidence 44575 43333 334556789999999999998732 35789999998843 799999999999 567777765
Q ss_pred cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCC--CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 123 EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV--TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 123 ~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~--~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.....-+.++|+-....++ .-.-.+++..|+++.|++.+. +++||+|+|||+|++ ||.++..|...|+ +|++++|
T Consensus 80 ~~~A~~iGAVNTv~~~~~g-~l~G~NTD~~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~I~nR 157 (282)
T TIGR01809 80 TDRASLIGSVNTLLRTQNG-IWKGDNTDWDGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDITVINR 157 (282)
T ss_pred CHHHHHhCceeEEEEcCCC-cEEEecCCHHHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 4556778889984321121 222349999999999998874 689999999999997 9999999999998 7999988
Q ss_pred CCC---C-------------------HHhhhccCcEEEEecCCCCCC
Q 027064 200 HTT---D-------------------PESIVREADIVIAAAGQAMMV 224 (229)
Q Consensus 200 ~t~---~-------------------l~~~~~~aDivisA~g~p~~i 224 (229)
... . +...+.++|+||+||+....+
T Consensus 158 t~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~ 204 (282)
T TIGR01809 158 NPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPA 204 (282)
T ss_pred CHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCC
Confidence 521 1 113346789999999876544
No 43
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.47 E-value=2.4e-13 Score=121.01 Aligned_cols=154 Identities=21% Similarity=0.275 Sum_probs=120.4
Q ss_pred HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhh
Q 027064 58 SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGK 136 (229)
Q Consensus 58 ~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~ 136 (229)
..-..+++++|+++.|..|+ +..++|.+.++.+... ++.|++|++|++ +.++.++|. ...+.-+.++|+-.
T Consensus 22 ~~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~~~~~~d~~~~~A~~igavNtv~ 93 (278)
T PRK00258 22 LIHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFK-----EAAFALADELSERARLIGAVNTLV 93 (278)
T ss_pred HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCH-----HHHHHHhhcCCHHHHHhCCceEEE
Confidence 34588999999999999887 6778898999888765 799999999998 566666665 44556678888854
Q ss_pred hhccCCCCCcccCCHHHHHHHHHH-hCCCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCCC---H-------
Q 027064 137 LAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTTD---P------- 204 (229)
Q Consensus 137 l~~~~~~~~~~PcTa~av~~lL~~-~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~~---l------- 204 (229)
..++ .-.-.+++..|++..|++ .+.++.||+|+|+|+|++ |+.++..|...| +.|++++++... +
T Consensus 94 -~~~g-~l~G~NTD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~ 170 (278)
T PRK00258 94 -LEDG-RLIGDNTDGIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL 170 (278)
T ss_pred -eeCC-EEEEEcccHHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence 2221 222349999999999997 567899999999999996 999999999999 589999885321 1
Q ss_pred ---------HhhhccCcEEEEecCCCC
Q 027064 205 ---------ESIVREADIVIAAAGQAM 222 (229)
Q Consensus 205 ---------~~~~~~aDivisA~g~p~ 222 (229)
.+.+..+|+||+||+..-
T Consensus 171 ~~~~~~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 171 GKAELDLELQEELADFDLIINATSAGM 197 (278)
T ss_pred cceeecccchhccccCCEEEECCcCCC
Confidence 133467899999998653
No 44
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.46 E-value=1.1e-12 Score=117.64 Aligned_cols=171 Identities=17% Similarity=0.177 Sum_probs=126.4
Q ss_pred CCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC---CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHH
Q 027064 39 VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ---VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEK 115 (229)
Q Consensus 39 ~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~---~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~ 115 (229)
.|++.. .+|+.-+-...=..-..+++++|+++.|..|+-. ++.++|.+.++.+... ++.|++|++|++ +.
T Consensus 4 ~~~~~~-liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~~-~~~G~nVTiP~K-----~~ 76 (284)
T PRK12549 4 PSFLAG-LIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERM-GFAGLNITHPCK-----QA 76 (284)
T ss_pred cceEEE-EECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHhc-CCCEEEECcCCH-----HH
Confidence 344433 3465333333445667889999999999998732 3467888888888644 799999999998 57
Q ss_pred HHhcCCc-cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-E
Q 027064 116 VLGEISL-EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-T 193 (229)
Q Consensus 116 i~~~I~p-~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-t 193 (229)
++..+|. ...+.-+.++|+-.. .++ .-.-.+++..|+++.|+....++++|+|+|+|+|++ |+.++..|...|+ +
T Consensus 77 v~~~~D~~~~~A~~iGAvNTv~~-~~g-~l~G~NTD~~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~ 153 (284)
T PRK12549 77 VIPHLDELSDDARALGAVNTVVF-RDG-RRIGHNTDWSGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVER 153 (284)
T ss_pred HHHHhccCCHHHHHhCCceEEEe-cCC-EEEEEcCCHHHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCE
Confidence 7777665 445666888888532 221 222349999999999998777889999999999996 9999999999998 7
Q ss_pred EEEEcCCCC----------------------CHHhhhccCcEEEEecC
Q 027064 194 VTIVHSHTT----------------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 194 Vtv~~~~t~----------------------~l~~~~~~aDivisA~g 219 (229)
|+++++... ++.+.++++|+||+||.
T Consensus 154 I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 154 LTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATP 201 (284)
T ss_pred EEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCc
Confidence 999988531 11234567999999975
No 45
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.44 E-value=1.5e-12 Score=117.03 Aligned_cols=144 Identities=15% Similarity=0.148 Sum_probs=113.9
Q ss_pred EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064 46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK 124 (229)
Q Consensus 46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K 124 (229)
.+|+.-+-...=..-..+++++|+++.|..++ ++.++|.+.++.+... ++.|++|++|++ ..++..+|. ..
T Consensus 12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K-----~~~~~~~D~l~~ 83 (288)
T PRK12749 12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNK-----QLACEYVDELTP 83 (288)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH-----HHHHHHhccCCH
Confidence 34653222223346678899999999999987 7778898888888655 699999999998 577777776 55
Q ss_pred cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
...-+.++|+-.. .++ .-.-.+++..|+++.|++.+.+++||+|+|+|+|+. +|.++..|...|+ .+++++|+
T Consensus 84 ~A~~iGAVNTv~~-~~g-~l~G~NTD~~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt 157 (288)
T PRK12749 84 AAKLVGAINTIVN-DDG-YLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRR 157 (288)
T ss_pred HHHHhCceeEEEc-cCC-EEEEEecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 6677889998532 221 222349999999999999999999999999999997 9999999999998 79999886
No 46
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.42 E-value=1.5e-12 Score=116.69 Aligned_cols=144 Identities=14% Similarity=0.193 Sum_probs=112.9
Q ss_pred EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064 46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK 124 (229)
Q Consensus 46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K 124 (229)
.+|+.-+....=..-..+++++|+++.|..|+ +..++|.+.++.+... ++.|++|++|++ +.++..+|. ..
T Consensus 14 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~v~~~ld~~~~ 85 (289)
T PRK12548 14 LIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKTF-NMRGANVTMPCK-----SEAAKYMDELSP 85 (289)
T ss_pred EEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHHC-CCCEEEECccCH-----HHHHHHhhcCCH
Confidence 34653322223345667799999999999998 6778888888888654 799999999998 577777776 55
Q ss_pred cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC
Q 027064 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH 200 (229)
Q Consensus 125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~ 200 (229)
.+.-+.++|+-.. .++ .-.-.+++..|+++.|++++.+++||+++|+|+|++ |+.++..|...|++ |+++++.
T Consensus 86 ~A~~iGavNTi~~-~~g-~l~G~NTD~~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 86 AARIIGAVNTIVN-DDG-KLTGHITDGLGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred HHHHhCceeEEEe-ECC-EEEEEecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 6777889998522 221 222349999999999999888899999999999986 99999999999996 9999875
No 47
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.40 E-value=1.3e-12 Score=115.61 Aligned_cols=153 Identities=18% Similarity=0.225 Sum_probs=118.3
Q ss_pred HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhh
Q 027064 58 SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGK 136 (229)
Q Consensus 58 ~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~ 136 (229)
..-...++++|+++.|..|+ +..++|.+.++.+... ++.|++|++|++ +.++..+|. ...+.-+..+|+-.
T Consensus 17 ~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~~~~~~d~~~~~A~~~gavNti~ 88 (270)
T TIGR00507 17 LIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFK-----EEAFQFLDEIDERAKLAGAVNTLK 88 (270)
T ss_pred HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH-----HHHHHHhhhCCHHHHHhCCceEEE
Confidence 45677899999999999987 6778888888888755 799999999998 566666655 44556678888854
Q ss_pred hhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH------------
Q 027064 137 LAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP------------ 204 (229)
Q Consensus 137 l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l------------ 204 (229)
..++ .-.-.+++..|+++.|++.+....+|+++|+|.|++ |++++..|...|+.|+++++.....
T Consensus 89 -~~~g-~l~g~NTD~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~ 165 (270)
T TIGR00507 89 -LEDG-KLVGYNTDGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE 165 (270)
T ss_pred -eeCC-EEEEEcCCHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc
Confidence 2221 222349999999999998766778999999999975 9999999999999999998753211
Q ss_pred ------H-hhhccCcEEEEecCCC
Q 027064 205 ------E-SIVREADIVIAAAGQA 221 (229)
Q Consensus 205 ------~-~~~~~aDivisA~g~p 221 (229)
. ....++|+||++|+..
T Consensus 166 ~~~~~~~~~~~~~~DivInatp~g 189 (270)
T TIGR00507 166 IQAFSMDELPLHRVDLIINATSAG 189 (270)
T ss_pred eEEechhhhcccCccEEEECCCCC
Confidence 1 1124789999999863
No 48
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.38 E-value=2.5e-12 Score=115.39 Aligned_cols=152 Identities=22% Similarity=0.290 Sum_probs=120.6
Q ss_pred HHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccchhh
Q 027064 58 SMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLNIGK 136 (229)
Q Consensus 58 ~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N~g~ 136 (229)
..-...++.+|+++.|..++ +..++|.+.++.+- +..+.|.+|++|++ ++++..+|- ..+..-++++|+-.
T Consensus 23 ~~Hn~~~~~lGl~~~Y~a~~--v~~~~l~~~v~~~~-~~g~~G~NVTiP~K-----e~~~~~lD~l~~~A~~iGAVNTl~ 94 (283)
T COG0169 23 RMHNAAFRALGLDYVYLAFE--VPPEDLPEAVSGIR-ALGFRGLNVTIPFK-----EAALPLLDELSPRARLIGAVNTLV 94 (283)
T ss_pred HHHHHHHHHcCCCceEEEee--cCHHHHHHHHHHHH-hcCCCeeEECCccH-----HHHHHHHhcCCHHHHHhCCceEEE
Confidence 45678899999999999998 66899999999998 66899999999998 566666554 55677789999854
Q ss_pred hhccCCCCCcccCCHHHHHHHHHHhC--CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC---CHH-----
Q 027064 137 LAMKGRDPLFLPCTPKGCLELLKRSG--VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT---DPE----- 205 (229)
Q Consensus 137 l~~~~~~~~~~PcTa~av~~lL~~~~--~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~---~l~----- 205 (229)
.-.++ .-.-.+++..|+++.|++++ .+.+|++|+|+|+|++ +|.++..|++.|+ +++|+||+.. .+.
T Consensus 95 ~~~~g-~l~G~NTD~~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~ 172 (283)
T COG0169 95 REDDG-KLRGYNTDGIGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVNRTRERAEELADLFGE 172 (283)
T ss_pred EccCC-EEEEEcCCHHHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 43211 22235999999999999987 5667999999999998 9999999999997 7999999642 111
Q ss_pred -------------hhhccCcEEEEecC
Q 027064 206 -------------SIVREADIVIAAAG 219 (229)
Q Consensus 206 -------------~~~~~aDivisA~g 219 (229)
+...++|+||+||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~dliINaTp 199 (283)
T COG0169 173 LGAAVEAAALADLEGLEEADLLINATP 199 (283)
T ss_pred cccccccccccccccccccCEEEECCC
Confidence 11115899999997
No 49
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.37 E-value=5.7e-12 Score=112.99 Aligned_cols=165 Identities=16% Similarity=0.162 Sum_probs=121.9
Q ss_pred ECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC---CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-
Q 027064 47 VGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ---VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL- 122 (229)
Q Consensus 47 vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~---~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p- 122 (229)
+|+.-+....=..-..+++++|+++.|..|+-. ++.++|.+.++.+... ++.|++|++|++ +.++..+|.
T Consensus 10 iG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~~~~~lD~l 83 (283)
T PRK14027 10 IGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYK-----QAVLPLLDEV 83 (283)
T ss_pred ECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCH-----HHHHHHhhhC
Confidence 354332222334567789999999999998732 3457888888877654 799999999998 567776665
Q ss_pred cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064 123 EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT 201 (229)
Q Consensus 123 ~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t 201 (229)
...+.-+.++|+-....++ .-.-.+++..|+++.|++.+.+++||+|+|+|+|++ ||.++..|...|+ .++++++..
T Consensus 84 ~~~A~~iGAVNTv~~~~~g-~l~G~NTD~~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~nR~~ 161 (283)
T PRK14027 84 SEQATQLGAVNTVVIDATG-HTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_pred CHHHHHhCCceEEEECCCC-cEEEEcCCHHHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCH
Confidence 4556678889984321121 222359999999999998666788999999999997 9999999999998 799998842
Q ss_pred C---CH---------------------HhhhccCcEEEEecC
Q 027064 202 T---DP---------------------ESIVREADIVIAAAG 219 (229)
Q Consensus 202 ~---~l---------------------~~~~~~aDivisA~g 219 (229)
. .+ .+.+..+|+||+||.
T Consensus 162 ~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 162 SRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred HHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCC
Confidence 1 11 112456899999986
No 50
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.36 E-value=8.4e-12 Score=111.38 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=124.5
Q ss_pred CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHH
Q 027064 37 GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKV 116 (229)
Q Consensus 37 ~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i 116 (229)
+..++|..=.+|+ |-|.+-. .-..+++++|+++.|..|+ .++|.+.++.+... ++.|++|++|++ +.+
T Consensus 6 ~~~~~~~~gliG~-P~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~~-~~~G~nVT~P~K-----~~~ 73 (272)
T PRK12550 6 NKDTQLCISLAAR-PSNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRAL-GIRGCAVSMPFK-----EAV 73 (272)
T ss_pred CCCceEEEEEEcc-chhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHhc-CCCEEEECcCCH-----HHH
Confidence 3456664555675 4666655 7888999999999999986 35677777777654 699999999998 566
Q ss_pred HhcCCc-cCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EE
Q 027064 117 LGEISL-EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TV 194 (229)
Q Consensus 117 ~~~I~p-~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tV 194 (229)
+..+|. ...+.-+.++|+-.. .++ .-.-++++..|+++.|++.+.+ .+|+|+|+|+|+. +|.++..|...|+ .|
T Consensus 74 ~~~lD~l~~~A~~iGAVNTi~~-~~g-~l~G~NTD~~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~~i 149 (272)
T PRK12550 74 IPLVDELDPSAQAIESVNTIVN-TDG-HLKAYNTDYIAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFTDG 149 (272)
T ss_pred HHHhhcCCHHHHHhCCeeEEEe-eCC-EEEEEecCHHHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCCEE
Confidence 766665 445667888998532 221 2223499999999999988775 4789999999997 9999999999998 59
Q ss_pred EEEcCCCC---CHH--------hh--hccCcEEEEecC
Q 027064 195 TIVHSHTT---DPE--------SI--VREADIVIAAAG 219 (229)
Q Consensus 195 tv~~~~t~---~l~--------~~--~~~aDivisA~g 219 (229)
++++|+.. .+. +. ...+|+||+||.
T Consensus 150 ~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp 187 (272)
T PRK12550 150 TIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTP 187 (272)
T ss_pred EEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCc
Confidence 99998632 111 11 145899999986
No 51
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.29 E-value=3.5e-11 Score=114.97 Aligned_cols=165 Identities=18% Similarity=0.253 Sum_probs=123.7
Q ss_pred EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064 46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK 124 (229)
Q Consensus 46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K 124 (229)
.+|+.-+-...=..-..+++++|+++.|..|+ +..++|.+.++.+... ++.|+.|++|++ ..++.++|. ..
T Consensus 220 liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K-----~~v~~~~d~~~~ 291 (477)
T PRK09310 220 LIGDPVDRSISHLSHNPLFSQLSLNCPYIKLP--LTPQELPKFFSTIRDL-PFLGLSVTMPLK-----TAVLDFLDKLDP 291 (477)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHhC-CCCEEEECccCH-----HHHHHHhccCCH
Confidence 55754332223345678899999999999987 6667787777777544 699999999998 566666665 44
Q ss_pred cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH
Q 027064 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP 204 (229)
Q Consensus 125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l 204 (229)
.+.-+.++|+-.. .++ .-.-.+++..|+++.|++.+.+++||+++|+|.|++ |++++..|.+.|++|+++++.....
T Consensus 292 ~A~~iGAVNTv~~-~~g-~l~G~NTD~~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~~~~ 368 (477)
T PRK09310 292 SVKLCGSCNTLVF-RNG-KIEGYNTDGEGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTKAHA 368 (477)
T ss_pred HHHHhCcceEEEe-eCC-EEEEEecCHHHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5666788888432 221 222349999999999999999999999999999985 9999999999999999997753211
Q ss_pred H----------------hhhccCcEEEEecCCC
Q 027064 205 E----------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 205 ~----------------~~~~~aDivisA~g~p 221 (229)
. ..+..+|+||+||+..
T Consensus 369 ~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g 401 (477)
T PRK09310 369 EALASRCQGKAFPLESLPELHRIDIIINCLPPS 401 (477)
T ss_pred HHHHHHhccceechhHhcccCCCCEEEEcCCCC
Confidence 1 1146789999999754
No 52
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.07 E-value=2.3e-09 Score=103.74 Aligned_cols=144 Identities=17% Similarity=0.208 Sum_probs=105.2
Q ss_pred EECCCcccHHHHHHHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cC
Q 027064 46 IVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EK 124 (229)
Q Consensus 46 ~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~K 124 (229)
.+|..-+-..-=..-..+++++|+++.|..|+- ++|.+.++.+.. .++.|+.|++|++ ..++.++|. ..
T Consensus 257 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~l~~~~~~l~~-~~~~G~nVTiP~K-----~~v~~~lD~~~~ 326 (529)
T PLN02520 257 IIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLV----DDLAKFLQTYSS-PDFAGFSCTIPHK-----EDALKCCDEVDP 326 (529)
T ss_pred EEcCCcccccCHHHHHHHHHHCCCCcEEEEeeh----hhHHHHHHHHhh-CCCCEEEECcCCH-----HHHHHHhccCCH
Confidence 557533322233566788999999999999973 356666666644 4799999999998 466666654 33
Q ss_pred cccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh----------CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEE
Q 027064 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS----------GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATV 194 (229)
Q Consensus 125 DVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~----------~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atV 194 (229)
.+.-+.++|+-.....+..-.-.+++..|+++.|++. +.+++||+|+|+|+|++ |++++..|.++|++|
T Consensus 327 ~A~~iGAVNTvv~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~~~G~~V 405 (529)
T PLN02520 327 IAKSIGAINTIIRRPSDGKLVGYNTDYIGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAKEKGARV 405 (529)
T ss_pred HHHHhCCceEEEEeCCCCEEEEEcccHHHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHHHCCCEE
Confidence 4555788887432110112123499999999999863 45789999999999986 999999999999999
Q ss_pred EEEcCC
Q 027064 195 TIVHSH 200 (229)
Q Consensus 195 tv~~~~ 200 (229)
+++++.
T Consensus 406 ~i~nR~ 411 (529)
T PLN02520 406 VIANRT 411 (529)
T ss_pred EEEcCC
Confidence 999874
No 53
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.93 E-value=1e-09 Score=102.96 Aligned_cols=101 Identities=24% Similarity=0.306 Sum_probs=81.2
Q ss_pred HHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EE
Q 027064 116 VLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TV 194 (229)
Q Consensus 116 i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tV 194 (229)
..++|.-.|-|---|.+|.|.+ .-+.+++++.++...++++|+|+|||+|++ |..++.+|.++|. .|
T Consensus 138 FqkAi~~gKrvRseT~I~~~~V-----------Si~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i 205 (414)
T COG0373 138 FQKAISVGKRVRSETGIGKGAV-----------SISSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKI 205 (414)
T ss_pred HHHHHHHHHHhhcccCCCCCcc-----------chHHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEE
Confidence 3345666666665565555433 236899999999998999999999999997 9999999999996 79
Q ss_pred EEEcCCCC-----------------CHHhhhccCcEEEEecCCCCCC-CCCC
Q 027064 195 TIVHSHTT-----------------DPESIVREADIVIAAAGQAMMV-TMGI 228 (229)
Q Consensus 195 tv~~~~t~-----------------~l~~~~~~aDivisA~g~p~~i-~~~~ 228 (229)
++|||+-. ++.+++.++||||||||.|++| +.++
T Consensus 206 ~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~~~~ 257 (414)
T COG0373 206 TIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIITREM 257 (414)
T ss_pred EEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccCHHH
Confidence 99998521 4568899999999999999995 6554
No 54
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=98.88 E-value=6.7e-09 Score=76.85 Aligned_cols=65 Identities=32% Similarity=0.506 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHhC----CCCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCCCHHhhhccCcEEEEecCCCCC
Q 027064 149 CTPKGCLELLKRSG----VTIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTTDPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 149 cTa~av~~lL~~~~----~~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~~l~~~~~~aDivisA~g~p~~ 223 (229)
||+.++++.|++.. .++++|+++|+|.|. +|++++.+|.+. +.+|+++++ |++|+++|.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~-~g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGE-VGKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 78999999998875 448999999999988 499999999998 568999977 999999999999
Q ss_pred CCC
Q 027064 224 VTM 226 (229)
Q Consensus 224 i~~ 226 (229)
+..
T Consensus 68 ~~~ 70 (86)
T cd05191 68 VLE 70 (86)
T ss_pred chH
Confidence 864
No 55
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.81 E-value=2e-09 Score=86.12 Aligned_cols=69 Identities=36% Similarity=0.443 Sum_probs=55.5
Q ss_pred HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCCC--------------------CHHhhhccCcEEE
Q 027064 157 LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHTT--------------------DPESIVREADIVI 215 (229)
Q Consensus 157 lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t~--------------------~l~~~~~~aDivi 215 (229)
+.++...+++||+|+|||+|++ |+.++..|..+|++ |++++|+.. ++.+.+.++|+||
T Consensus 2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI 80 (135)
T PF01488_consen 2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI 80 (135)
T ss_dssp HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence 4455555899999999999996 99999999999996 999998521 2335678999999
Q ss_pred EecCCCCC-CCC
Q 027064 216 AAAGQAMM-VTM 226 (229)
Q Consensus 216 sA~g~p~~-i~~ 226 (229)
+||+.++. ++.
T Consensus 81 ~aT~~~~~~i~~ 92 (135)
T PF01488_consen 81 NATPSGMPIITE 92 (135)
T ss_dssp E-SSTTSTSSTH
T ss_pred EecCCCCcccCH
Confidence 99999976 343
No 56
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.80 E-value=4.5e-09 Score=87.20 Aligned_cols=71 Identities=28% Similarity=0.435 Sum_probs=51.2
Q ss_pred HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCCCC
Q 027064 157 LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 157 lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p~~ 223 (229)
+++..+..+.||+++|+|.|. ||+.+|..|...||.|+|+.... ..+.+.++.||++|+|||..+.
T Consensus 13 i~r~t~~~l~Gk~vvV~GYG~-vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG~~~v 91 (162)
T PF00670_consen 13 IMRATNLMLAGKRVVVIGYGK-VGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATGNKDV 91 (162)
T ss_dssp HHHHH-S--TTSEEEEE--SH-HHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SSSSSS
T ss_pred HHhcCceeeCCCEEEEeCCCc-ccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCCCccc
Confidence 445568889999999999999 59999999999999999996532 2577889999999999999998
Q ss_pred CCCCC
Q 027064 224 VTMGI 228 (229)
Q Consensus 224 i~~~~ 228 (229)
|+.++
T Consensus 92 i~~e~ 96 (162)
T PF00670_consen 92 ITGEH 96 (162)
T ss_dssp B-HHH
T ss_pred cCHHH
Confidence 87543
No 57
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.70 E-value=2.9e-08 Score=93.50 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC------------------CHHhhhc
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT------------------DPESIVR 209 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~------------------~l~~~~~ 209 (229)
..+.+.+++.++...++.||+|+|||+|++ |+.++..|..+|+ .+++++++-. ++.+.+.
T Consensus 163 Sv~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~ 241 (414)
T PRK13940 163 SVAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIK 241 (414)
T ss_pred CHHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhc
Confidence 456788999999877899999999999997 9999999999997 7999988521 2346688
Q ss_pred cCcEEEEecCCCCCC-CCCC
Q 027064 210 EADIVIAAAGQAMMV-TMGI 228 (229)
Q Consensus 210 ~aDivisA~g~p~~i-~~~~ 228 (229)
+||+||+|||.|+++ +.++
T Consensus 242 ~aDiVI~aT~a~~~vi~~~~ 261 (414)
T PRK13940 242 KADIIIAAVNVLEYIVTCKY 261 (414)
T ss_pred cCCEEEECcCCCCeeECHHH
Confidence 999999999999995 6543
No 58
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.66 E-value=4e-08 Score=93.76 Aligned_cols=71 Identities=28% Similarity=0.414 Sum_probs=60.6
Q ss_pred HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-------------CCCHHhhhccCcEEEEecCCCCC
Q 027064 157 LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-------------TTDPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 157 lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-------------t~~l~~~~~~aDivisA~g~p~~ 223 (229)
+++.++..+.||+|+|+|.|. +|+++|..|...|++|++|++. ..++.+.++.||+||+++|.+++
T Consensus 244 ~~R~~~~~LaGKtVgVIG~G~-IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~i 322 (476)
T PTZ00075 244 IFRATDVMIAGKTVVVCGYGD-VGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDI 322 (476)
T ss_pred HHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccc
Confidence 445567899999999999999 5999999999999999999654 22567889999999999999999
Q ss_pred CCCCC
Q 027064 224 VTMGI 228 (229)
Q Consensus 224 i~~~~ 228 (229)
|+.++
T Consensus 323 I~~e~ 327 (476)
T PTZ00075 323 ITLEH 327 (476)
T ss_pred cCHHH
Confidence 87543
No 59
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.60 E-value=1.1e-07 Score=87.45 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----CHH----hhhccCcEEEEe-
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----DPE----SIVREADIVIAA- 217 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----~l~----~~~~~aDivisA- 217 (229)
..+.+++++++.. .+++||+|+|||+|++ |+.++..|.++|+ .+++||++-. ++. ++..++||||+|
T Consensus 157 Sv~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t 234 (338)
T PRK00676 157 TIESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGS 234 (338)
T ss_pred CHHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcC
Confidence 3456678888776 5799999999999997 9999999999996 6999999731 222 456799999997
Q ss_pred --cCCCCCC-CCC
Q 027064 218 --AGQAMMV-TMG 227 (229)
Q Consensus 218 --~g~p~~i-~~~ 227 (229)
|+.|+++ +.+
T Consensus 235 ~~Tas~~p~i~~~ 247 (338)
T PRK00676 235 SESAYAFPHLSWE 247 (338)
T ss_pred CcCCCCCceeeHH
Confidence 7888884 543
No 60
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.42 E-value=4.6e-07 Score=81.72 Aligned_cols=68 Identities=19% Similarity=0.304 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEE
Q 027064 152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVI 215 (229)
Q Consensus 152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivi 215 (229)
.++...++++++++.|++|+|+|.|. +|++++..|.+.|++|++++++.. ++.+.++++|+||
T Consensus 137 gav~~a~~~~~~~l~g~kvlViG~G~-iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI 215 (296)
T PRK08306 137 GAIMMAIEHTPITIHGSNVLVLGFGR-TGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIF 215 (296)
T ss_pred HHHHHHHHhCCCCCCCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEE
Confidence 34666788888899999999999999 599999999999999999988742 3457789999999
Q ss_pred EecCC
Q 027064 216 AAAGQ 220 (229)
Q Consensus 216 sA~g~ 220 (229)
++++.
T Consensus 216 ~t~p~ 220 (296)
T PRK08306 216 NTIPA 220 (296)
T ss_pred ECCCh
Confidence 99863
No 61
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.38 E-value=8.9e-07 Score=77.01 Aligned_cols=78 Identities=27% Similarity=0.390 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE---EEEEcCC----CC-------------------
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT---VTIVHSH----TT------------------- 202 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at---Vtv~~~~----t~------------------- 202 (229)
.+..|++.-++..+.+++|++++|+|+|++ |+.++.+|...|++ +++++++ ..
T Consensus 7 v~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~ 85 (226)
T cd05311 7 VTLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPE 85 (226)
T ss_pred HHHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccC
Confidence 456788899999998999999999999997 99999999999986 9999987 11
Q ss_pred ----CHHhhhccCcEEEEecCCCCCCCCCC
Q 027064 203 ----DPESIVREADIVIAAAGQAMMVTMGI 228 (229)
Q Consensus 203 ----~l~~~~~~aDivisA~g~p~~i~~~~ 228 (229)
++.+.++++|+||++|+ ++.+++++
T Consensus 86 ~~~~~l~~~l~~~dvlIgaT~-~G~~~~~~ 114 (226)
T cd05311 86 KTGGTLKEALKGADVFIGVSR-PGVVKKEM 114 (226)
T ss_pred cccCCHHHHHhcCCEEEeCCC-CCCCCHHH
Confidence 23355677899999999 88887654
No 62
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.34 E-value=6e-07 Score=84.92 Aligned_cols=78 Identities=28% Similarity=0.316 Sum_probs=65.3
Q ss_pred cCCHHHHHHHHHHh-CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcE
Q 027064 148 PCTPKGCLELLKRS-GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADI 213 (229)
Q Consensus 148 PcTa~av~~lL~~~-~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDi 213 (229)
-+|..+++.-+++. ++.+.||+|+|+|.|. +|+.++..|...|++|+++++.. .++.+.++.+|+
T Consensus 192 ~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~-IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDV 270 (425)
T PRK05476 192 YGTGESLLDGIKRATNVLIAGKVVVVAGYGD-VGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDI 270 (425)
T ss_pred HHHHhhhHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCE
Confidence 35788888876666 7788999999999999 59999999999999999997542 145677889999
Q ss_pred EEEecCCCCCCCC
Q 027064 214 VIAAAGQAMMVTM 226 (229)
Q Consensus 214 visA~g~p~~i~~ 226 (229)
||++||.++.|..
T Consensus 271 VI~aTG~~~vI~~ 283 (425)
T PRK05476 271 FVTATGNKDVITA 283 (425)
T ss_pred EEECCCCHHHHHH
Confidence 9999999887753
No 63
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.31 E-value=1.3e-06 Score=78.65 Aligned_cols=72 Identities=24% Similarity=0.322 Sum_probs=58.4
Q ss_pred CCHHHHH-HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccC
Q 027064 149 CTPKGCL-ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREA 211 (229)
Q Consensus 149 cTa~av~-~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~a 211 (229)
+|+.+.+ ..++.+++++.||+|+|+|.|.+ |+.++..|...|++|++++++.. ++.+.++++
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a 210 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI 210 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence 4555444 55677788999999999999995 99999999999999999987532 245678899
Q ss_pred cEEEEecCCC
Q 027064 212 DIVIAAAGQA 221 (229)
Q Consensus 212 DivisA~g~p 221 (229)
|+||++++.+
T Consensus 211 DiVint~P~~ 220 (287)
T TIGR02853 211 DIVINTIPAL 220 (287)
T ss_pred CEEEECCChH
Confidence 9999998643
No 64
>PLN00203 glutamyl-tRNA reductase
Probab=98.22 E-value=2.1e-06 Score=83.14 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=64.8
Q ss_pred cCCHHHHHHHHHHhCC--CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------CH
Q 027064 148 PCTPKGCLELLKRSGV--TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------DP 204 (229)
Q Consensus 148 PcTa~av~~lL~~~~~--~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------~l 204 (229)
...+.+++++.+.... ++.+++|+|||.|.+ |+.++..|..+|+ .|++++++-. ++
T Consensus 245 vSv~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl 323 (519)
T PLN00203 245 VSVSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEM 323 (519)
T ss_pred cCHHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhH
Confidence 3456788899988754 489999999999996 9999999999998 6999987421 23
Q ss_pred HhhhccCcEEEEecCCCCC-CCCCC
Q 027064 205 ESIVREADIVIAAAGQAMM-VTMGI 228 (229)
Q Consensus 205 ~~~~~~aDivisA~g~p~~-i~~~~ 228 (229)
.+.+..||+||+|||.|+. |+.+|
T Consensus 324 ~~al~~aDVVIsAT~s~~pvI~~e~ 348 (519)
T PLN00203 324 LACAAEADVVFTSTSSETPLFLKEH 348 (519)
T ss_pred HHHHhcCCEEEEccCCCCCeeCHHH
Confidence 4567899999999999998 46655
No 65
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.22 E-value=1.9e-06 Score=81.14 Aligned_cols=78 Identities=29% Similarity=0.406 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC-----------------CHHhhhccC
Q 027064 150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT-----------------DPESIVREA 211 (229)
Q Consensus 150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~-----------------~l~~~~~~a 211 (229)
.+.+++++.++...++.|++|+|+|.|.+ |..++..|...| ..|+++++... ++.+.+..+
T Consensus 163 v~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~a 241 (417)
T TIGR01035 163 ISSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEA 241 (417)
T ss_pred HHHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhC
Confidence 45666777776666789999999999996 999999999999 57999977421 233557799
Q ss_pred cEEEEecCCCCC-CCCCC
Q 027064 212 DIVIAAAGQAMM-VTMGI 228 (229)
Q Consensus 212 DivisA~g~p~~-i~~~~ 228 (229)
|+||+|||.|+. ++.+|
T Consensus 242 DvVi~aT~s~~~ii~~e~ 259 (417)
T TIGR01035 242 DIVISSTGAPHPIVSKED 259 (417)
T ss_pred CEEEECCCCCCceEcHHH
Confidence 999999999987 46554
No 66
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.19 E-value=2.1e-06 Score=80.97 Aligned_cols=79 Identities=24% Similarity=0.380 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------------CHHhhhcc
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------------DPESIVRE 210 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------------~l~~~~~~ 210 (229)
+.+.+.+++.+....++.|++|+|+|.|.+ |+.++.+|...|+ .|+++++... ++.+.+..
T Consensus 164 Sv~~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~ 242 (423)
T PRK00045 164 SVASAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAE 242 (423)
T ss_pred CHHHHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhcc
Confidence 344555676665544689999999999996 9999999999998 7999987421 12345788
Q ss_pred CcEEEEecCCCCC-CCCCC
Q 027064 211 ADIVIAAAGQAMM-VTMGI 228 (229)
Q Consensus 211 aDivisA~g~p~~-i~~~~ 228 (229)
+|+||+|||.|+. ++.+|
T Consensus 243 aDvVI~aT~s~~~~i~~~~ 261 (423)
T PRK00045 243 ADIVISSTGAPHPIIGKGM 261 (423)
T ss_pred CCEEEECCCCCCcEEcHHH
Confidence 9999999999987 46554
No 67
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.15 E-value=3e-06 Score=79.82 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=61.4
Q ss_pred CCHHHHHH-HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEE
Q 027064 149 CTPKGCLE-LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIV 214 (229)
Q Consensus 149 cTa~av~~-lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDiv 214 (229)
+|...+++ +++..++.+.||+|+|+|.|.+ |+.+++.|...|+.|++++... .++.+.++.+|+|
T Consensus 176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV 254 (406)
T TIGR00936 176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 254 (406)
T ss_pred ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence 45555555 4444577899999999999995 9999999999999999985432 1356778899999
Q ss_pred EEecCCCCCCCC
Q 027064 215 IAAAGQAMMVTM 226 (229)
Q Consensus 215 isA~g~p~~i~~ 226 (229)
|+++|.++.|+.
T Consensus 255 ItaTG~~~vI~~ 266 (406)
T TIGR00936 255 ITATGNKDVIRG 266 (406)
T ss_pred EECCCCHHHHHH
Confidence 999999987753
No 68
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=98.10 E-value=6.1e-06 Score=76.24 Aligned_cols=80 Identities=21% Similarity=0.261 Sum_probs=64.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C------------CHHhhhccCcEE
Q 027064 148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T------------DPESIVREADIV 214 (229)
Q Consensus 148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~------------~l~~~~~~aDiv 214 (229)
=|--..+=-+++.+++-+.||+|||.|.|. |||..|+.|...||.|+|+.-.- + .+.+..+.+||+
T Consensus 190 GtgqS~~DgI~RaTn~liaGK~vVV~GYG~-vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDif 268 (420)
T COG0499 190 GTGQSLLDGILRATNVLLAGKNVVVAGYGW-VGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIF 268 (420)
T ss_pred ccchhHHHHHHhhhceeecCceEEEecccc-cchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEE
Confidence 343344445556688889999999999999 69999999999999999885431 1 355778999999
Q ss_pred EEecCCCCCCCCCC
Q 027064 215 IAAAGQAMMVTMGI 228 (229)
Q Consensus 215 isA~g~p~~i~~~~ 228 (229)
|++||.-+.|+.|+
T Consensus 269 iT~TGnkdVi~~eh 282 (420)
T COG0499 269 VTATGNKDVIRKEH 282 (420)
T ss_pred EEccCCcCccCHHH
Confidence 99999999987654
No 69
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.06 E-value=1.3e-05 Score=75.76 Aligned_cols=78 Identities=26% Similarity=0.353 Sum_probs=62.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcE
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADI 213 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDi 213 (229)
+-|--..+-.+++..++.+.|++|+|+|.|.+ |+.++..+...||+|+++.... .++.+.++.+|+
T Consensus 182 ~g~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDV 260 (413)
T cd00401 182 YGCRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDI 260 (413)
T ss_pred chhchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCE
Confidence 34544455556666788899999999999995 9999999999999999986532 135567889999
Q ss_pred EEEecCCCCCCC
Q 027064 214 VIAAAGQAMMVT 225 (229)
Q Consensus 214 visA~g~p~~i~ 225 (229)
||.|+|.++.+.
T Consensus 261 VI~atG~~~~i~ 272 (413)
T cd00401 261 FVTTTGNKDIIT 272 (413)
T ss_pred EEECCCCHHHHH
Confidence 999999988764
No 70
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.02 E-value=2.8e-05 Score=62.28 Aligned_cols=73 Identities=26% Similarity=0.457 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC-------------------CHHhhhc
Q 027064 150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT-------------------DPESIVR 209 (229)
Q Consensus 150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~-------------------~l~~~~~ 209 (229)
+..|+.+-+++.++++++++++|+|.|.+ |+.++..|.+.| ..|+++++... +..+.+.
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLA 80 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccc
Confidence 45789999999998899999999999885 999999999886 68999876421 2223467
Q ss_pred cCcEEEEecCCCCC
Q 027064 210 EADIVIAAAGQAMM 223 (229)
Q Consensus 210 ~aDivisA~g~p~~ 223 (229)
++|+||++++.+..
T Consensus 81 ~~Dvvi~~~~~~~~ 94 (155)
T cd01065 81 EADLIINTTPVGMK 94 (155)
T ss_pred cCCEEEeCcCCCCC
Confidence 89999999987654
No 71
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.00 E-value=1.6e-05 Score=72.10 Aligned_cols=74 Identities=24% Similarity=0.372 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC-----------------CHHhhhcc
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT-----------------DPESIVRE 210 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~-----------------~l~~~~~~ 210 (229)
+.+...+++.+....++.|++|+|||.|.+ |+.++.+|...|+ .|+++++... ++.+.+.+
T Consensus 160 sv~~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~ 238 (311)
T cd05213 160 SISSAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNE 238 (311)
T ss_pred CHHHHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhc
Confidence 344555777776655689999999999996 9999999998775 7898987421 23455788
Q ss_pred CcEEEEecCCCCC
Q 027064 211 ADIVIAAAGQAMM 223 (229)
Q Consensus 211 aDivisA~g~p~~ 223 (229)
+|+||+|||.|+.
T Consensus 239 aDvVi~at~~~~~ 251 (311)
T cd05213 239 ADVVISATGAPHY 251 (311)
T ss_pred CCEEEECCCCCch
Confidence 9999999999876
No 72
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.98 E-value=1.6e-05 Score=66.72 Aligned_cols=76 Identities=28% Similarity=0.403 Sum_probs=58.0
Q ss_pred cCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------
Q 027064 148 PCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------- 202 (229)
Q Consensus 148 PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------- 202 (229)
..|+.+.++++++ .+.+++|++++|+|.++.+|+.++..|.+.|+.|+++.++-.
T Consensus 5 ~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~ 84 (194)
T cd01078 5 NTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVE 84 (194)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEee
Confidence 3466666666655 456899999999997555799999999999999999876411
Q ss_pred -----CHHhhhccCcEEEEecCCCCC
Q 027064 203 -----DPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 203 -----~l~~~~~~aDivisA~g~p~~ 223 (229)
++.+.++++|+||+||+.+.+
T Consensus 85 ~~~~~~~~~~~~~~diVi~at~~g~~ 110 (194)
T cd01078 85 TSDDAARAAAIKGADVVFAAGAAGVE 110 (194)
T ss_pred CCCHHHHHHHHhcCCEEEECCCCCce
Confidence 112557789999999988773
No 73
>PLN02494 adenosylhomocysteinase
Probab=97.97 E-value=1.2e-05 Score=77.05 Aligned_cols=75 Identities=25% Similarity=0.371 Sum_probs=59.2
Q ss_pred CHHHHHHHH-HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEE
Q 027064 150 TPKGCLELL-KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVI 215 (229)
Q Consensus 150 Ta~av~~lL-~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivi 215 (229)
|-+++++-+ +..++.+.||+|+|+|.|.+ |+.+|..+...|++|++++.... ++.+.++.||+||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 334444433 34477789999999999995 99999999999999999855321 3567788999999
Q ss_pred EecCCCCCCC
Q 027064 216 AAAGQAMMVT 225 (229)
Q Consensus 216 sA~g~p~~i~ 225 (229)
+++|.+++|.
T Consensus 315 ~tTGt~~vI~ 324 (477)
T PLN02494 315 TTTGNKDIIM 324 (477)
T ss_pred ECCCCccchH
Confidence 9999998874
No 74
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.94 E-value=2.9e-05 Score=66.23 Aligned_cols=71 Identities=24% Similarity=0.308 Sum_probs=54.1
Q ss_pred cCCHHHHHHHHHHh------CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH--------------hh
Q 027064 148 PCTPKGCLELLKRS------GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE--------------SI 207 (229)
Q Consensus 148 PcTa~av~~lL~~~------~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~--------------~~ 207 (229)
|.|++|+...++.. +.+++||++.|+|.|. +|+.++..|.+.|++|+++++....+. +.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 67888886665543 6789999999999998 599999999999999998876532111 12
Q ss_pred h-ccCcEEEEecC
Q 027064 208 V-READIVIAAAG 219 (229)
Q Consensus 208 ~-~~aDivisA~g 219 (229)
. .++|+++.++.
T Consensus 82 ~~~~~Dv~vp~A~ 94 (200)
T cd01075 82 YSVDADVFAPCAL 94 (200)
T ss_pred ccccCCEEEeccc
Confidence 2 36899986554
No 75
>PRK12862 malic enzyme; Reviewed
Probab=97.89 E-value=6.4e-05 Score=75.94 Aligned_cols=157 Identities=20% Similarity=0.217 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccch
Q 027064 56 YVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNI 134 (229)
Q Consensus 56 Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~ 134 (229)
=...|.-.+..+ ||++..+.++.. +.+||++.++.+- |+.-||.+. --+.-+--++.+.....-|+.-||.
T Consensus 96 v~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~E--D~~~~~~f~i~~~~~~~~~ip~f~D--- 167 (763)
T PRK12862 96 VMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLE--DIKAPECFYIERELRERMKIPVFHD--- 167 (763)
T ss_pred hHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeee--cccCchHHHHHHHHHhcCCCceEec---
Confidence 345666666665 588777777754 7799999999997 667776653 1122223345555444445665653
Q ss_pred hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC----------
Q 027064 135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---------- 201 (229)
Q Consensus 135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---------- 201 (229)
++.+-.-.+..|++.-++-.+.+++.-++++.|+|.. |-.++.+|...|. .+++|+++-
T Consensus 168 -------D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~l 239 (763)
T PRK12862 168 -------DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTELM 239 (763)
T ss_pred -------CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCccc
Confidence 2445556778899999999999999999999999998 9999999999998 689998631
Q ss_pred -------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 202 -------------TDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 -------------~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
.+|.+.++.+|++|-.++ |+.+++|||
T Consensus 240 ~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v 279 (763)
T PRK12862 240 DPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMV 279 (763)
T ss_pred cHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHH
Confidence 146788999999999998 999999885
No 76
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.85 E-value=8.8e-05 Score=74.72 Aligned_cols=158 Identities=20% Similarity=0.235 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHcC-CeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccc
Q 027064 55 SYVSMKRKACAEVG-IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLN 133 (229)
Q Consensus 55 ~Y~~~k~k~a~~~G-i~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N 133 (229)
--...|.-.+..+| |++..+.++.. +.+||++.++.+- |+.-||.+.= -+.-+--++.+....+-|+.-||.
T Consensus 87 pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED--~~~p~~f~i~~~~~~~~~ip~f~D-- 159 (752)
T PRK07232 87 PVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLED--IKAPECFYIEEKLRERMDIPVFHD-- 159 (752)
T ss_pred cHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeee--cCCchHHHHHHHHHHhcCCCeecc--
Confidence 34456777777664 88777777654 6899999999886 6677777641 122222344444444445555653
Q ss_pred hhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC---------
Q 027064 134 IGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT--------- 201 (229)
Q Consensus 134 ~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t--------- 201 (229)
++.+-.-.+..|++.-|+-.+.+++.-++++.|+|.. |-.++.+|...|. .+++|+++-
T Consensus 160 --------D~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~ 230 (752)
T PRK07232 160 --------DQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRTEG 230 (752)
T ss_pred --------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCccc
Confidence 2444446677899999999999999999999999998 9999999999988 689997741
Q ss_pred --------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 202 --------------TDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 --------------~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
.+|.+.++.+|++|-.++ |+.+++|||
T Consensus 231 ~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v 271 (752)
T PRK07232 231 MDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMV 271 (752)
T ss_pred ccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHH
Confidence 147788999999998888 999999875
No 77
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.83 E-value=3.4e-05 Score=65.98 Aligned_cols=59 Identities=25% Similarity=0.367 Sum_probs=47.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCH-----------------HhhhccCcEEEEecCCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDP-----------------ESIVREADIVIAAAGQAM 222 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l-----------------~~~~~~aDivisA~g~p~ 222 (229)
++++||+|+|||.|.+ |.-.+..|+..|+.|+++...- +.+ ...+..+|+||+||+.|.
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~e 82 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPR 82 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHH
Confidence 4689999999999995 9999999999999999986532 111 234778999999999774
No 78
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.78 E-value=4e-05 Score=63.11 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=47.0
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHH--------------hhhccCcEEEEecCCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPE--------------SIVREADIVIAAAGQAM 222 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~--------------~~~~~aDivisA~g~p~ 222 (229)
++++|++|+|||.|. ||.-.+..|+..||.|+++... +.++. ..+..+|+||.||+.+.
T Consensus 9 l~l~~~~vlVvGGG~-va~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e 82 (157)
T PRK06719 9 FNLHNKVVVIIGGGK-IAYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA 82 (157)
T ss_pred EEcCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHH
Confidence 578999999999999 5999999999999999998432 22221 23778999999998653
No 79
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.69 E-value=9.4e-05 Score=61.65 Aligned_cols=59 Identities=22% Similarity=0.254 Sum_probs=48.1
Q ss_pred HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecC
Q 027064 160 RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 160 ~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g 219 (229)
..+.++.||+|.|||.|.+ |+.+|.+|..-|++|+.+++... ++.+.+++||+|+...+
T Consensus 29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~p 100 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLP 100 (178)
T ss_dssp TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SS
T ss_pred CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhc
Confidence 3456899999999999996 99999999999999999987542 57788999999999877
No 80
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.69 E-value=5.4e-05 Score=57.78 Aligned_cols=59 Identities=34% Similarity=0.473 Sum_probs=44.5
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecCCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g~p~ 222 (229)
.+++||+|+|||.|.+ |..-+..|++.||+|+++.... +...+.+..+|+||.|++.|.
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPE 72 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHH
Confidence 4689999999999995 9999999999999999986652 233466888999999998653
No 81
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.67 E-value=0.00011 Score=67.79 Aligned_cols=71 Identities=23% Similarity=0.233 Sum_probs=55.3
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhC-CC-EEEEEcCCCC---------------CHHhhhccCcEEE
Q 027064 153 GCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA-DA-TVTIVHSHTT---------------DPESIVREADIVI 215 (229)
Q Consensus 153 av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~-~a-tVtv~~~~t~---------------~l~~~~~~aDivi 215 (229)
++..-.+..+.+++||+|+|+|+++.+|..++..|.++ |+ .++++++... ++.+.+.++|+||
T Consensus 141 ~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv 220 (340)
T PRK14982 141 QVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVV 220 (340)
T ss_pred HHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEE
Confidence 44444555677899999999999777899999999864 54 8889987432 2225678899999
Q ss_pred EecCCCCC
Q 027064 216 AAAGQAMM 223 (229)
Q Consensus 216 sA~g~p~~ 223 (229)
++++.|+.
T Consensus 221 ~~ts~~~~ 228 (340)
T PRK14982 221 WVASMPKG 228 (340)
T ss_pred ECCcCCcC
Confidence 99999877
No 82
>PRK12861 malic enzyme; Reviewed
Probab=97.62 E-value=0.00018 Score=72.58 Aligned_cols=157 Identities=18% Similarity=0.191 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccch
Q 027064 56 YVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNI 134 (229)
Q Consensus 56 Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~ 134 (229)
=...|.-.+..+ ||++..+.++. .+.+||++.++.+..- .-||.+. --+.-+--++.+....+=|+.-||.-
T Consensus 92 vmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~~~--fg~i~lE--D~~~p~~f~il~~~~~~~~ipvf~DD-- 164 (764)
T PRK12861 92 VMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLEPT--FGGINLE--DIKAPECFTVERKLRERMKIPVFHDD-- 164 (764)
T ss_pred hHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHHhh--cCCceee--eccCchHHHHHHHHHhcCCCCeeccc--
Confidence 345676666665 58877777765 5678999999888644 5664432 21222223344433322255556632
Q ss_pred hhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC----------
Q 027064 135 GKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---------- 201 (229)
Q Consensus 135 g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---------- 201 (229)
..+-.-.+..|++.-|+-.+.+++.-++++.|+|.. |-.++.+|...|. .+++|+++-
T Consensus 165 --------~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~~l 235 (764)
T PRK12861 165 --------QHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTTLM 235 (764)
T ss_pred --------cchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcccC
Confidence 344445677899999999999999999999999998 9999999999998 589998631
Q ss_pred -------------CCHHhhhccCcEEEEecCCCCCCCCCCC
Q 027064 202 -------------TDPESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 -------------~~l~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
.+|.+.++.+|++|-.++ |+.+++|||
T Consensus 236 ~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v 275 (764)
T PRK12861 236 DPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEML 275 (764)
T ss_pred CHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHH
Confidence 146788999999998887 999999875
No 83
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.60 E-value=0.00027 Score=66.52 Aligned_cols=159 Identities=21% Similarity=0.291 Sum_probs=118.1
Q ss_pred cHHHHHHHHHHHHHc-CCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCC-CCCCCCHHHHHhcCCccCcccccC
Q 027064 53 SQSYVSMKRKACAEV-GIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLP-LPKHINEEKVLGEISLEKDVDGFH 130 (229)
Q Consensus 53 s~~Y~~~k~k~a~~~-Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~P-lp~~i~~~~i~~~I~p~KDVDg~~ 130 (229)
+.-=...|.-.++++ ||++..+.++.. +.+++.+.++.+. |..-||+++-= .|+- .++...+.-+.|+.-||
T Consensus 99 g~pVmeGKa~Lfk~faGid~~pI~ld~~-~~~ei~~~Vkal~--p~FgginLedi~ap~c---f~ie~~lr~~~~IPvFh 172 (432)
T COG0281 99 GKPVMEGKAVLFKAFAGIDVLPIELDVG-TNNEIIEFVKALE--PTFGGINLEDIDAPRC---FAIEERLRYRMNIPVFH 172 (432)
T ss_pred CcchhhhHHHHHHHhcCCCceeeEeeCC-ChHHHHHHHHHhh--hcCCCcceeecccchh---hHHHHHHhhcCCCCccc
Confidence 333445676666654 788888888865 5578999999996 55899998742 2221 23444455577888777
Q ss_pred ccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC---EEEEEcCCC---C--
Q 027064 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA---TVTIVHSHT---T-- 202 (229)
Q Consensus 131 ~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a---tVtv~~~~t---~-- 202 (229)
.-- .+-.--|..|++.-|+-.|.+++..++++.|+|.. |-.++.+|.+.|. .+++|+|+- .
T Consensus 173 DDq----------qGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~r 241 (432)
T COG0281 173 DDQ----------QGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDGR 241 (432)
T ss_pred ccc----------cHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCCC
Confidence 433 33334467899999999999999999999999998 9999999999988 599998852 1
Q ss_pred -CH-------------------HhhhccCcEEEEecCCCCCCCCCCC
Q 027064 203 -DP-------------------ESIVREADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 203 -~l-------------------~~~~~~aDivisA~g~p~~i~~~~v 229 (229)
++ .+.+..||++|..+|. +.+++|||
T Consensus 242 ~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V 287 (432)
T COG0281 242 EDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMV 287 (432)
T ss_pred cccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHH
Confidence 10 2245679999999988 99999885
No 84
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.59 E-value=7.1e-05 Score=69.62 Aligned_cols=63 Identities=24% Similarity=0.320 Sum_probs=49.8
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------CCHHhhhccCcEEEEecC---C
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------TDPESIVREADIVIAAAG---Q 220 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------~~l~~~~~~aDivisA~g---~ 220 (229)
+.+++|+|+|.|. +|+.++..|...|++|+++++.. .++.+.+++||+||++++ .
T Consensus 165 l~~~~VlViGaG~-vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGV-VGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCH-HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 5678999999998 59999999999999999997631 124566789999999984 3
Q ss_pred --CCCCCCCC
Q 027064 221 --AMMVTMGI 228 (229)
Q Consensus 221 --p~~i~~~~ 228 (229)
|.+|+.++
T Consensus 244 ~~p~lit~~~ 253 (370)
T TIGR00518 244 KAPKLVSNSL 253 (370)
T ss_pred CCCcCcCHHH
Confidence 56666544
No 85
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=97.55 E-value=0.00031 Score=65.71 Aligned_cols=64 Identities=22% Similarity=0.330 Sum_probs=53.8
Q ss_pred HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064 155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g 219 (229)
+.+.++.+.++.||++.|||.|.+ |+.+|..|..-|++|..|+... .++.+.+++||||+..++
T Consensus 104 L~l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~P 176 (378)
T PRK15438 104 LMLAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTP 176 (378)
T ss_pred HHHhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCC
Confidence 444556678899999999999995 9999999999999999997421 257889999999998776
No 86
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.54 E-value=0.00015 Score=62.27 Aligned_cols=58 Identities=31% Similarity=0.479 Sum_probs=47.3
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCH-----------------HhhhccCcEEEEecCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDP-----------------ESIVREADIVIAAAGQA 221 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l-----------------~~~~~~aDivisA~g~p 221 (229)
++++||+|+|||.|. ||.--+..|++.||.|+++.... +.+ .+.+..+|+||.|||.+
T Consensus 5 l~l~gk~vlVvGgG~-va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~ 80 (205)
T TIGR01470 5 ANLEGRAVLVVGGGD-VALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDE 80 (205)
T ss_pred EEcCCCeEEEECcCH-HHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCH
Confidence 468999999999999 59999999999999999986542 211 13467899999999976
No 87
>PLN02928 oxidoreductase family protein
Probab=97.49 E-value=0.00031 Score=64.82 Aligned_cols=56 Identities=23% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAA 217 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA 217 (229)
.++.||++.|||.|.+ |+.+|.+|...|++|+.+++.. .++.+.+++||+|+.+
T Consensus 155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 4789999999999996 9999999999999999987531 1567889999999999
Q ss_pred cC
Q 027064 218 AG 219 (229)
Q Consensus 218 ~g 219 (229)
++
T Consensus 234 lP 235 (347)
T PLN02928 234 CT 235 (347)
T ss_pred CC
Confidence 76
No 88
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=97.49 E-value=0.00041 Score=64.99 Aligned_cols=64 Identities=23% Similarity=0.311 Sum_probs=53.8
Q ss_pred HHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064 155 LELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 155 ~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g 219 (229)
+.+.++.+.++.||+|.|||.|.+ |+.++..|...|++|..++... .++.+.+++||+|+..++
T Consensus 104 L~l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~P 176 (381)
T PRK00257 104 LTLAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTP 176 (381)
T ss_pred HHHhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCc
Confidence 344456678899999999999995 9999999999999999997521 257788999999998877
No 89
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.44 E-value=0.00041 Score=63.60 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=49.2
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g~ 220 (229)
.++.||++.|||.|.+ |+.+|.+|...|++|..+++.. .++.+.+++||+|+.+++-
T Consensus 146 ~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~ 214 (333)
T PRK13243 146 YDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPL 214 (333)
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCC
Confidence 4689999999999996 9999999999999999887632 1467889999999999874
No 90
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=97.35 E-value=0.037 Score=50.53 Aligned_cols=148 Identities=17% Similarity=0.136 Sum_probs=101.7
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCC-CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccC
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ-VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~-~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~ 130 (229)
.|..---+=..++.++|-.+..+.-..+ ...+.+.+..+-|+. -+|+|.+-.| .+-....+.+.. .+-
T Consensus 53 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~--~~~~~~~~a~~~-------~vP 121 (311)
T PRK14804 53 TSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLK--KHEDLLVMKNGS-------QVP 121 (311)
T ss_pred CchhHHHHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCC--ChHHHHHHHHHC-------CCC
Confidence 5666666778899999999988865322 222334444666665 4899999866 333333333221 233
Q ss_pred ccchhhhhccCCCCCcccCCHHHHHHHHHHhCC--CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------
Q 027064 131 PLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGV--TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------- 201 (229)
Q Consensus 131 ~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~--~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------- 201 (229)
-+|.| + ....||=+.+=+--+++... +++|++|++||.+.-|.+.++.+|..-|+.|++|.-.+
T Consensus 122 VINag-----~--~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 194 (311)
T PRK14804 122 VINGC-----D--NMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHA 194 (311)
T ss_pred EEECC-----C--CCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHH
Confidence 45543 1 24779988887666655433 68999999999988889999999999999999886432
Q ss_pred ---------------CCHHhhhccCcEEEEe
Q 027064 202 ---------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 ---------------~~l~~~~~~aDivisA 217 (229)
.++.+.++.||+|.+-
T Consensus 195 ~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 195 QTVERAKKKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred HHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence 3556778899999873
No 91
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.28 E-value=0.00073 Score=61.97 Aligned_cols=58 Identities=17% Similarity=0.279 Sum_probs=49.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------CCHHhhhccCcEEEEecCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~~l~~~~~~aDivisA~g~p 221 (229)
..+.|+++.|||.|.+ |+++|.+|...|++|+.+++.. .++.+.+++||+|+.+++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t 209 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPAN 209 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCc
Confidence 3689999999999996 9999999999999999887532 26778899999999998744
No 92
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.25 E-value=0.00085 Score=60.93 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=49.3
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g~ 220 (229)
..+.||++.|||-|.+ |+++|.+|...|++|..+++.. .++.+.+++||+|+...+-
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~ 183 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPL 183 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCC
Confidence 4789999999999996 9999999998999999987631 2578889999999998773
No 93
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.24 E-value=0.00083 Score=60.55 Aligned_cols=55 Identities=15% Similarity=0.247 Sum_probs=48.6
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHHhhhccCcEEEEecCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~~~~~~aDivisA~g~p 221 (229)
.+++|.|||.|.+ |.+++..|.+.|.+|++.++. +.++.+.+++||+||.++..+
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~ 58 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMK 58 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChH
Confidence 5689999999996 999999999999999999876 467888899999999998754
No 94
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=97.19 E-value=0.031 Score=51.53 Aligned_cols=146 Identities=15% Similarity=0.006 Sum_probs=101.5
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCCC----HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVS----EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~----~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD 127 (229)
+|..---+=..++.++|..+..+ +...+ -|.+.+.++-|+.- +|+|.+-.| .+-...++.+.. .
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~--~~~~~~~~a~~s----~-- 122 (332)
T PRK04284 55 DSTRTRCAFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGF--SQRTVETLAEYS----G-- 122 (332)
T ss_pred CChhHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecC--chHHHHHHHHhC----C--
Confidence 45555567778899999998865 33322 26677777777665 889999765 332233333322 1
Q ss_pred ccCccchhhhhccCCCCCcccCCHHHHHHHHHHh-CCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC----
Q 027064 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS-GVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT---- 201 (229)
Q Consensus 128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~-~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t---- 201 (229)
+--+|.| .....||=+.+=+--+.+. ..+++|++|++||-+ .-|.+.++.+|...|++|++|+-.+
T Consensus 123 -vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~ 194 (332)
T PRK04284 123 -VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPD 194 (332)
T ss_pred -CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCC
Confidence 3345532 1346799888877777665 457999999999985 3579999999999999999986432
Q ss_pred ---------------------CCHHhhhccCcEEEEe
Q 027064 202 ---------------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 ---------------------~~l~~~~~~aDivisA 217 (229)
.|+.+.++.||+|.+-
T Consensus 195 ~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 195 DELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 3556788999999874
No 95
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.17 E-value=0.00096 Score=63.40 Aligned_cols=64 Identities=27% Similarity=0.331 Sum_probs=49.4
Q ss_pred HHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----CHHhh----------------hccCcEEEEe
Q 027064 158 LKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----DPESI----------------VREADIVIAA 217 (229)
Q Consensus 158 L~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~l~~~----------------~~~aDivisA 217 (229)
|.+.+.++.|++|+|||.|.+ |..+|..|.++|++|++++.... .+.+. ...+|.||.+
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s 85 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTS 85 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEEC
Confidence 456677889999999999995 99999999999999999975432 11111 2348999999
Q ss_pred cCCCC
Q 027064 218 AGQAM 222 (229)
Q Consensus 218 ~g~p~ 222 (229)
+|.|.
T Consensus 86 ~Gi~~ 90 (480)
T PRK01438 86 PGWRP 90 (480)
T ss_pred CCcCC
Confidence 99753
No 96
>PRK14031 glutamate dehydrogenase; Provisional
Probab=97.17 E-value=0.0043 Score=59.25 Aligned_cols=53 Identities=25% Similarity=0.290 Sum_probs=44.8
Q ss_pred CcccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEE-Ec
Q 027064 145 LFLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTI-VH 198 (229)
Q Consensus 145 ~~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv-~~ 198 (229)
.--+.|.+|++..+++ .+.+++||+|+|.|.|+ ||.-++.+|.+.||+|+. ++
T Consensus 202 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaVSD 259 (444)
T PRK14031 202 IRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTMSD 259 (444)
T ss_pred CCCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEC
Confidence 3457899988766554 57899999999999999 599999999999999876 55
No 97
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=97.15 E-value=0.0006 Score=62.26 Aligned_cols=83 Identities=25% Similarity=0.286 Sum_probs=63.2
Q ss_pred CcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccC
Q 027064 145 LFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREA 211 (229)
Q Consensus 145 ~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~a 211 (229)
.++-|--.-+--+-+...+-+.||.+||.|.|. |||.-|..|...|+.|++....-. .+.+.++++
T Consensus 192 nLygcreSl~DgikraTDvM~aGKv~Vv~GYGd-VGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~ 270 (434)
T KOG1370|consen 192 NLYGCRESLLDGIKRATDVMIAGKVAVVCGYGD-VGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREV 270 (434)
T ss_pred ccccchhhhhhhhhhhhhheecccEEEEeccCc-cchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcC
Confidence 344454333333344456778999999999999 599999999999999998854321 366889999
Q ss_pred cEEEEecCCCCCCCCCC
Q 027064 212 DIVIAAAGQAMMVTMGI 228 (229)
Q Consensus 212 DivisA~g~p~~i~~~~ 228 (229)
||+|++||.-..|+.++
T Consensus 271 difVTtTGc~dii~~~H 287 (434)
T KOG1370|consen 271 DIFVTTTGCKDIITGEH 287 (434)
T ss_pred CEEEEccCCcchhhHHH
Confidence 99999999998886543
No 98
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=97.12 E-value=0.042 Score=49.99 Aligned_cols=148 Identities=18% Similarity=0.153 Sum_probs=102.1
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~ 129 (229)
.|..---+=..++.++|.++..+.-..+ ...|.+.+.++-|+.- +|+|.+-.| .+-...++.+. -++
T Consensus 53 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~--~~~~~~~~a~~-------~~v 121 (304)
T PRK00779 53 PSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTF--EHETLEELAEY-------STV 121 (304)
T ss_pred CCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCC--ChhHHHHHHHh-------CCC
Confidence 5666666778899999999888753221 1125566776666655 788888765 32222333222 224
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------- 201 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------- 201 (229)
--+|.|- ....||=+.+=+--+.+.-..++|++++++|...-|.+.++.+|..-|++|++|+-.+
T Consensus 122 PVINag~-------~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~ 194 (304)
T PRK00779 122 PVINGLT-------DLSHPCQILADLLTIYEHRGSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIV 194 (304)
T ss_pred CEEeCCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHHH
Confidence 4566641 3466998887776665544579999999999966689999999999999999986432
Q ss_pred --------------CCHHhhhccCcEEEEe
Q 027064 202 --------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 --------------~~l~~~~~~aDivisA 217 (229)
.++.+.++.||+|..-
T Consensus 195 ~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 195 EKIAKETGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred HHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 2556788999999874
No 99
>PRK07574 formate dehydrogenase; Provisional
Probab=97.12 E-value=0.0013 Score=61.61 Aligned_cols=56 Identities=25% Similarity=0.326 Sum_probs=48.7
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g 219 (229)
.++.||+|.|||.|.+ |+.+|..|...|++|..+++.. .++.+.+++||+|+...+
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lP 257 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCP 257 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCC
Confidence 4589999999999996 9999999999999999887642 256788999999998876
No 100
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.11 E-value=0.0016 Score=59.39 Aligned_cols=56 Identities=9% Similarity=0.069 Sum_probs=47.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g 219 (229)
..+.||+|.|||-|.+ |+.+|..|...|+.|+..++.. .++.+.+++||+|+.+.+
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCC
Confidence 4689999999999996 9999999999999998876532 146788999999998876
No 101
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.11 E-value=0.0011 Score=59.77 Aligned_cols=80 Identities=19% Similarity=0.347 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhC----CC-------EEEEEcCCC----------------
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA----DA-------TVTIVHSHT---------------- 201 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~----~a-------tVtv~~~~t---------------- 201 (229)
++..|++.-++-.+.+++.-+++++|+|.. |-.++.+|... |. .+++|+++-
T Consensus 7 V~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~ 85 (279)
T cd05312 7 VALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPF 85 (279)
T ss_pred HHHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHH
Confidence 456788999999999999999999999998 99999988764 76 688887741
Q ss_pred ---------CCHHhhhc--cCcEEEEecCCCCCCCCCCC
Q 027064 202 ---------TDPESIVR--EADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 ---------~~l~~~~~--~aDivisA~g~p~~i~~~~v 229 (229)
.+|.+.++ ++|++|-.+|.|+.++.|||
T Consensus 86 a~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 86 ARKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred HhhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHH
Confidence 14667788 88999999999999998864
No 102
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.10 E-value=0.0016 Score=59.20 Aligned_cols=56 Identities=25% Similarity=0.310 Sum_probs=48.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------~~l~~~~~~aDivisA~g 219 (229)
.++.||++.|||.|.+ |+.+|.+|..-|++|..+++.. .++.+.+++||+|+...+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~P 205 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAP 205 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCC
Confidence 3689999999999996 9999999999999999887632 157889999999999876
No 103
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=97.09 E-value=0.069 Score=49.26 Aligned_cols=187 Identities=16% Similarity=0.061 Sum_probs=117.4
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcC--C-----CCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CC
Q 027064 11 IIDGKAVAQTIRSEIAEEVRLLSEKY--G-----KVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VS 81 (229)
Q Consensus 11 il~G~~la~~i~~~i~~~~~~l~~~~--~-----~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~ 81 (229)
+|+-..+.++=.+.+-+...++++.. + ...+.+..++-+ .|..---+=..++.++|..+.+.....+ ..
T Consensus 10 ~l~~~dls~~ei~~ll~~A~~~k~~~~~~~~~~~L~gk~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~k 87 (331)
T PRK02102 10 FLKLLDFTPEEIEYLIDLSIELKAAKKAGIEHQYLEGKNIALIFEK--TSTRTRCAFEVAAIDLGAHVTYLGPNDSQLGK 87 (331)
T ss_pred ccchHHCCHHHHHHHHHHHHHHHHHhhcCCCcccCCCCEEEEEeCC--CChhHHHHHHHHHHHcCCCEEEcCcccccCCC
Confidence 55555555444444444444444311 1 122333333332 5666666778899999999885532110 12
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh
Q 027064 82 EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS 161 (229)
Q Consensus 82 ~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~ 161 (229)
.|.+.+.++-|+.- +|+|.+--| ++-..+++.+.. + +--+|.|- ....||=+.+=+--+++.
T Consensus 88 gEsl~Dt~rvls~y--~D~iviR~~--~~~~~~~~a~~~----~---vPVINa~~-------~~~HPtQaLaDl~Ti~e~ 149 (331)
T PRK02102 88 KESIEDTARVLGRM--YDGIEYRGF--KQEIVEELAKYS----G---VPVWNGLT-------DEWHPTQMLADFMTMKEH 149 (331)
T ss_pred CcCHHHHHHHHhhc--CCEEEEECC--chHHHHHHHHhC----C---CCEEECCC-------CCCChHHHHHHHHHHHHH
Confidence 26677777777655 889999866 322223333332 2 23455431 346699888877777655
Q ss_pred CCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEE
Q 027064 162 GVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVI 215 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivi 215 (229)
-..++|+++++||.. .-|.++++.+|..-|++|++|+-.. .++.+.++.||+|.
T Consensus 150 ~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy 229 (331)
T PRK02102 150 FGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIY 229 (331)
T ss_pred hCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEE
Confidence 557999999999996 4489999999999999999985432 24557789999998
Q ss_pred Ee
Q 027064 216 AA 217 (229)
Q Consensus 216 sA 217 (229)
+-
T Consensus 230 t~ 231 (331)
T PRK02102 230 TD 231 (331)
T ss_pred Ec
Confidence 74
No 104
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=97.08 E-value=0.065 Score=49.55 Aligned_cols=147 Identities=15% Similarity=0.120 Sum_probs=101.1
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~ 129 (229)
.|..---+=..++.++|-.+..+.-... -..|.+.+.++-|+.- +|+|.+-.| .|-..+++.+.. ++
T Consensus 52 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~~~~~a~~~-------~v 120 (338)
T PRK02255 52 SSTRTRVSFETAMTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQTVVELAKYA-------TV 120 (338)
T ss_pred CCcchHHHHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHHHHHHHHhC-------CC
Confidence 4555556778899999999888753211 1126677777777665 789988865 333333333322 23
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHH-HHhC--CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-----
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELL-KRSG--VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----- 201 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~--~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----- 201 (229)
--+|.| .....||=+.+=+--+ |+.+ .+++|++|++||-..-|.+.++.+|...|++|++|+-..
T Consensus 121 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 193 (338)
T PRK02255 121 PVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPE 193 (338)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCH
Confidence 445532 1346799887766655 4443 369999999999977789999999999999999986432
Q ss_pred --------------------CCHHhhhccCcEEEE
Q 027064 202 --------------------TDPESIVREADIVIA 216 (229)
Q Consensus 202 --------------------~~l~~~~~~aDivis 216 (229)
.++.+.++.||+|.+
T Consensus 194 ~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~ 228 (338)
T PRK02255 194 EHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYT 228 (338)
T ss_pred HHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEE
Confidence 355678999999987
No 105
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.06 E-value=0.0017 Score=59.58 Aligned_cols=57 Identities=26% Similarity=0.318 Sum_probs=47.9
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHH-hhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLL-LKADATVTIVHSHT-----------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L-~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g~ 220 (229)
.++.|++|.|||.|.+ |+.+|.+| ...|++|+..++.. .++.+.+++||+|+.+++.
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~ 210 (332)
T PRK08605 142 RSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPA 210 (332)
T ss_pred ceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCC
Confidence 4689999999999996 99999999 55688998886532 3678889999999999874
No 106
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.05 E-value=0.0017 Score=59.11 Aligned_cols=56 Identities=23% Similarity=0.303 Sum_probs=47.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------~~l~~~~~~aDivisA~g 219 (229)
.++.||++.|||.|.+ |+-+|.+|..-|++|...++.. .++.+.+++||+|+.+.+
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~P 206 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCP 206 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCC
Confidence 3689999999999996 9999999999999998775432 157899999999998876
No 107
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=97.03 E-value=0.001 Score=59.11 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=66.9
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-----------EEEEEcCCC----------------
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-----------TVTIVHSHT---------------- 201 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-----------tVtv~~~~t---------------- 201 (229)
+|..|++.-++-.+.+++.-+++++|+|.. |-.++.+|...+. .+++|+++-
T Consensus 7 V~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~ 85 (254)
T cd00762 7 VAVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHL 85 (254)
T ss_pred HHHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHH
Confidence 456788999999999999999999999998 9999999976543 588887741
Q ss_pred ----------CCHHhhhc--cCcEEEEecCCCCCCCCCCC
Q 027064 202 ----------TDPESIVR--EADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 ----------~~l~~~~~--~aDivisA~g~p~~i~~~~v 229 (229)
.+|.+.++ ++|++|-.+|.|+.+|.|||
T Consensus 86 ~~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv 125 (254)
T cd00762 86 ARFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVI 125 (254)
T ss_pred HHHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHH
Confidence 14667788 89999999999999998874
No 108
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.03 E-value=0.002 Score=58.79 Aligned_cols=56 Identities=18% Similarity=0.207 Sum_probs=48.2
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------~~l~~~~~~aDivisA~g 219 (229)
.++.||++.|||.|.+ |+.+|.+|..-|++|...++.. .++.+.+++||+|+...+
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lP 206 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCP 206 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCC
Confidence 3689999999999996 9999999999999998776531 257899999999998876
No 109
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=97.02 E-value=0.048 Score=49.58 Aligned_cols=148 Identities=20% Similarity=0.183 Sum_probs=102.2
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~ 129 (229)
.|..---+=..++.++|..+..+.-..+ ...|-+.+.++-|+.- +|+|.+-.|-. -..+.+.+.. ++
T Consensus 49 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~--~~~~~~a~~~-------~v 117 (304)
T TIGR00658 49 PSTRTRVSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKH--EDVEELAKYA-------SV 117 (304)
T ss_pred CCcchHHHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCCh--HHHHHHHHhC-------CC
Confidence 4555566678899999999887743221 1125666666666655 78999986632 2223333332 13
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------- 201 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------- 201 (229)
--+|.| .....||=+.+=+--+.++-..++|.+|+++|...-|-+.++.+|..-|+.|++|+-..
T Consensus 118 PVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~ 190 (304)
T TIGR00658 118 PVINGL-------TDLFHPCQALADLLTIIEHFGKLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIV 190 (304)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcCCHHHH
Confidence 345553 13467998888766665554469999999999966789999999999999999996432
Q ss_pred -----------------CCHHhhhccCcEEEEe
Q 027064 202 -----------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 -----------------~~l~~~~~~aDivisA 217 (229)
.++.+.++.||+|..-
T Consensus 191 ~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 191 KKAQEIAKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred HHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 2556789999999874
No 110
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=97.01 E-value=0.069 Score=48.55 Aligned_cols=149 Identities=14% Similarity=0.108 Sum_probs=103.1
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg 128 (229)
+|..---+=..++.++|..+..+.-+.+. ..|-+.+..+-|+.- +|+|.+-.| .|-...++.+.. +
T Consensus 49 pSTRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~s-------~ 117 (301)
T TIGR00670 49 PSTRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAAEVS-------E 117 (301)
T ss_pred CCchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHHhhC-------C
Confidence 46666667788999999988877542221 125555555555544 789999865 444444444432 2
Q ss_pred cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCCC-----
Q 027064 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSHT----- 201 (229)
Q Consensus 129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~t----- 201 (229)
+--+|.|- .....||=+.+=+--++++-.+++|++|+++|-+ .-|.+.++.++..-|+.|++|+-..
T Consensus 118 vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~ 191 (301)
T TIGR00670 118 VPVINAGD------GSNQHPTQTLLDLYTIYEEFGRLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPK 191 (301)
T ss_pred CCEEeCCC------CCCCCcHHHHHHHHHHHHHhCCCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 34455431 1346799888877766655447999999999996 5679999999999999999986543
Q ss_pred ----------------CCHHhhhccCcEEEEe
Q 027064 202 ----------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 ----------------~~l~~~~~~aDivisA 217 (229)
.|+.+.++.||+|.+-
T Consensus 192 ~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 192 EILEELKAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred HHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 2456778999998874
No 111
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=97.00 E-value=0.1 Score=47.45 Aligned_cols=130 Identities=15% Similarity=0.096 Sum_probs=90.7
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg 128 (229)
.|..---+=..++.++|.++..+.- .+. .-|.+.+.++-|+.- +|+|.+-.| .+-...++.+.. +
T Consensus 48 pSTRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~--~~~~~~~~a~~~----~--- 115 (302)
T PRK14805 48 PSLRTRVSFDIGINKLGGHCLYLDQ-QNGALGKRESVADFAANLSCW--ADAIVARVF--SHSTIEQLAEHG----S--- 115 (302)
T ss_pred CCchHHHHHHHHHHHcCCcEEECCC-CcCcCCCCcCHHHHHHHHHHh--CCEEEEeCC--ChhHHHHHHHhC----C---
Confidence 4655556778899999999888652 221 125666666666655 789999865 333233333322 2
Q ss_pred cCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+--+|.|- ....||=+.+=+--+++...+++|++|++||-+..|.+.++.+|..-|+.|++|+-.
T Consensus 116 vPVINa~~-------~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~ 180 (302)
T PRK14805 116 VPVINALC-------DLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPP 180 (302)
T ss_pred CCEEECCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCc
Confidence 34455531 246799888877666655457999999999998889999999999999999999643
No 112
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.99 E-value=0.0011 Score=54.06 Aligned_cols=52 Identities=31% Similarity=0.426 Sum_probs=41.9
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEecCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~g~ 220 (229)
+|+|+|+|.. |..+|..|..+|.+|++..+.. .|+++.++.||+||.|++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999997 9999999999999999985531 2677889999999999874
Q ss_pred C
Q 027064 221 A 221 (229)
Q Consensus 221 p 221 (229)
-
T Consensus 80 ~ 80 (157)
T PF01210_consen 80 Q 80 (157)
T ss_dssp G
T ss_pred H
Confidence 3
No 113
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.99 E-value=0.0019 Score=59.28 Aligned_cols=57 Identities=23% Similarity=0.281 Sum_probs=50.3
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g 219 (229)
+.++.||++-|||.|.+ |+-++..|..-|++|..++..+. +|.+.+++||||+.-++
T Consensus 137 g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~P 206 (324)
T COG0111 137 GTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLP 206 (324)
T ss_pred cccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCC
Confidence 56789999999999996 99999999999999999988432 48899999999998776
No 114
>PLN02342 ornithine carbamoyltransferase
Probab=96.95 E-value=0.07 Score=49.54 Aligned_cols=148 Identities=14% Similarity=0.037 Sum_probs=101.6
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~ 129 (229)
.|..---+=..++.++|.++..+.-... ...|.+.+.++-|..- +|+|.+-.|-. -..+++.+.. .+
T Consensus 95 pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y--~D~IviR~~~~--~~~~~la~~~-------~v 163 (348)
T PLN02342 95 PSMRTRVSFETGFFLLGGHALYLGPDDIQLGKREETRDIARVLSRY--NDIIMARVFAH--QDVLDLAEYS-------SV 163 (348)
T ss_pred CCcchHHHHHHHHHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHh--CCEEEEeCCCh--HHHHHHHHhC-------CC
Confidence 4555555677889999999988743221 1225666666666655 78999986632 2223333322 23
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------- 201 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------- 201 (229)
--+|.| ...+.||=+.+=+--+.+.-.+++|++|++||-..-|-+.++.+|...|++|++|+-.+
T Consensus 164 PVINA~-------~~~~HPtQaLaDl~Ti~e~~G~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~ 236 (348)
T PLN02342 164 PVINGL-------TDYNHPCQIMADALTIIEHIGRLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTV 236 (348)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHH
Confidence 445542 13467998887666665444479999999999988899999999999999999985432
Q ss_pred --------------CCHHhhhccCcEEEEe
Q 027064 202 --------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 --------------~~l~~~~~~aDivisA 217 (229)
.|+.+.++.||+|.+-
T Consensus 237 ~~a~~~g~~~~~~~~d~~eav~~aDVvy~~ 266 (348)
T PLN02342 237 EKARAAGISKIEITNDPAEAVKGADVVYTD 266 (348)
T ss_pred HHHHHhCCCcEEEEcCHHHHhCCCCEEEEC
Confidence 3556789999999876
No 115
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.95 E-value=0.0019 Score=59.42 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=48.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhccCcEEEEecCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~~aDivisA~g~ 220 (229)
.++||+|.|||-|.+ |+++|..|...|+.|++.++..+ ++.+.+++||+|+..++-
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd 81 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPD 81 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCC
Confidence 478999999999996 99999999999999998865421 577889999999988764
No 116
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=96.95 E-value=0.075 Score=49.08 Aligned_cols=149 Identities=15% Similarity=0.039 Sum_probs=101.4
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCC--CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPE--QVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~--~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~ 129 (229)
+|..---+=..++.++|..+.++.... -...|.+.+.++-|+.- +|+|.+-.|-. -..+++.+.. + +
T Consensus 55 pSTRTR~SFE~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~--~~~~~~a~~~----~---v 123 (334)
T PRK12562 55 DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQ--EVVETLAEYA----G---V 123 (334)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh--CCEEEEECCch--HHHHHHHHhC----C---C
Confidence 566666677788999999998774221 01226677777777665 78999987632 2223333332 2 3
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHH-HHhCC-CCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC-----
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELL-KRSGV-TIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT----- 201 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~~-~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t----- 201 (229)
--+|.| .....||=+.+=+--+ |+.+. .++|+++++||-. ..|.++++.++..-|+.|++|.-.+
T Consensus 124 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~ 196 (334)
T PRK12562 124 PVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEA 196 (334)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcH
Confidence 345543 1246699887766655 44443 5899999999984 3479999999999999999986533
Q ss_pred --------------------CCHHhhhccCcEEEEec
Q 027064 202 --------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 202 --------------------~~l~~~~~~aDivisA~ 218 (229)
.|+.+.++.||+|.+-.
T Consensus 197 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 197 SLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 35557789999998753
No 117
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.94 E-value=0.0014 Score=53.67 Aligned_cols=52 Identities=25% Similarity=0.348 Sum_probs=42.3
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~ 220 (229)
++|-+||-|.+ |.+++..|.++|.+|+++++.. .+..+.++++|+||+++..
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPD 67 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSS
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeeccc
Confidence 58999999996 9999999999999999998753 1567889999999998764
No 118
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.94 E-value=0.0044 Score=60.82 Aligned_cols=153 Identities=17% Similarity=0.191 Sum_probs=104.1
Q ss_pred HHHHHHHH-cCCe---eeeecCCCCCCH--------------------------HHHHHHHHHhcCCCCC-cEEEEeCCC
Q 027064 59 MKRKACAE-VGIK---SFDIDLPEQVSE--------------------------AELISKVHELNVMPDV-HGILVQLPL 107 (229)
Q Consensus 59 ~k~k~a~~-~Gi~---~~~~~l~~~~~~--------------------------~el~~~I~~lN~d~~v-~GIlvq~Pl 107 (229)
.|.-.+.. .||+ +-.+.|+..+.. +||++.++. .. -..++|.=-
T Consensus 199 GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~LL~DP~YlG~r~~Rv~g~eY~~~~defv~av~~-----~fGp~~~I~~ED 273 (581)
T PLN03129 199 GKLDLYTAAGGIRPSAVLPVCIDVGTNNEKLLNDPFYIGLRQPRLTGEEYDELVDEFMEAVKQ-----RWGPKVLVQFED 273 (581)
T ss_pred hHHHHHHhhcCCChhhccceEEecCCCchhhccCccccCcCCCCCchhhHHHhHHHHHHHHHH-----HhCCccEEehhh
Confidence 46666665 4888 666777754333 555555555 12 124555443
Q ss_pred CCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHH
Q 027064 108 PKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLL 187 (229)
Q Consensus 108 p~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L 187 (229)
.+.-+--++++... .++-.|| |+..+-.-++..|++.-++-.+.+++.-+++++|+|.. |-.+|.+|
T Consensus 274 f~~~~af~iL~ryr--~~i~~Fn----------DDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll 340 (581)
T PLN03129 274 FANKNAFRLLQRYR--TTHLCFN----------DDIQGTAAVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELI 340 (581)
T ss_pred cCCccHHHHHHHhc--cCCCEec----------cccchHHHHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHH
Confidence 33333344444332 2333333 22445557788999999999999999999999999998 99999988
Q ss_pred hh-----CCC-------EEEEEcCCC------------------------CCHHhhhcc--CcEEEEecCCCCCCCCCCC
Q 027064 188 LK-----ADA-------TVTIVHSHT------------------------TDPESIVRE--ADIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 188 ~~-----~~a-------tVtv~~~~t------------------------~~l~~~~~~--aDivisA~g~p~~i~~~~v 229 (229)
.. .|. .+++|+++- .+|.+.++. +|++|-++|.|+.++++||
T Consensus 341 ~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi 420 (581)
T PLN03129 341 ALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVL 420 (581)
T ss_pred HHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHHHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHH
Confidence 76 365 688887741 146677888 8999999999999998874
No 119
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.94 E-value=0.0019 Score=53.87 Aligned_cols=54 Identities=24% Similarity=0.325 Sum_probs=42.2
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g 219 (229)
|+||+|.|||.|.- |+.-|..|.+.|.+|+++.+... +..+..++||+|+..++
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~P 69 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLP 69 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCC
Confidence 57999999999997 99999999999999999977643 46688999999998764
No 120
>PRK13529 malate dehydrogenase; Provisional
Probab=96.90 E-value=0.0077 Score=58.93 Aligned_cols=153 Identities=20% Similarity=0.254 Sum_probs=108.0
Q ss_pred HHHHHHHHc-CCe---eeeecCCCCCC--------------------------HHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 027064 59 MKRKACAEV-GIK---SFDIDLPEQVS--------------------------EAELISKVHELNVMPDVHGILVQLPLP 108 (229)
Q Consensus 59 ~k~k~a~~~-Gi~---~~~~~l~~~~~--------------------------~~el~~~I~~lN~d~~v~GIlvq~Plp 108 (229)
.|.-....+ ||+ +--+.|+..+. .+||++.++++= |+ .++|.==.
T Consensus 174 GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~Ll~DP~YlG~r~~R~~g~eY~~f~defv~av~~~~--P~---~~I~~EDf 248 (563)
T PRK13529 174 GKLSLYTACGGIDPARTLPVVLDVGTNNEQLLNDPLYLGWRHPRIRGEEYDEFVDEFVQAVKRRF--PN---ALLQFEDF 248 (563)
T ss_pred cHHHHhhccCCCChhheeceEEecCCCchhhccCccccCcCCCCCchHHHHHHHHHHHHHHHHhC--CC---eEEehhhc
Confidence 466655555 688 66667775432 367778787775 44 25655433
Q ss_pred CCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHh
Q 027064 109 KHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL 188 (229)
Q Consensus 109 ~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~ 188 (229)
+.-+--++++... +++-.|| |+..+-.-++..|++.-++-.+.+++.-++++.|+|.. |-.+|.+|.
T Consensus 249 ~~~~af~iL~ryr--~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll~ 315 (563)
T PRK13529 249 AQKNARRILERYR--DEICTFN----------DDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQIV 315 (563)
T ss_pred CCchHHHHHHHhc--cCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHH
Confidence 3344444544432 2333333 23455557788999999999999999999999999998 999999988
Q ss_pred h----CCC-------EEEEEcCC---C-----------------------------CCHHhhhccC--cEEEEecCCCCC
Q 027064 189 K----ADA-------TVTIVHSH---T-----------------------------TDPESIVREA--DIVIAAAGQAMM 223 (229)
Q Consensus 189 ~----~~a-------tVtv~~~~---t-----------------------------~~l~~~~~~a--DivisA~g~p~~ 223 (229)
. .|. .+++|+++ + .+|.+.++.+ |++|-++|.|+.
T Consensus 316 ~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g~ 395 (563)
T PRK13529 316 AAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPGA 395 (563)
T ss_pred HHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCCC
Confidence 6 576 68888774 1 1456788888 999999999999
Q ss_pred CCCCCC
Q 027064 224 VTMGIL 229 (229)
Q Consensus 224 i~~~~v 229 (229)
++.|||
T Consensus 396 Ft~evv 401 (563)
T PRK13529 396 FTEEIV 401 (563)
T ss_pred CCHHHH
Confidence 998864
No 121
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.89 E-value=0.0031 Score=57.70 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=47.8
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCCC------------CCHHhhhccCcEEEEecC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSHT------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~t------------~~l~~~~~~aDivisA~g 219 (229)
+.++.||++.|||.|.+ |+.+|..|. .-|++|...++.. .++.+.+++||+|+...+
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~p 209 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILP 209 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCC
Confidence 45789999999999996 999999997 8899988776542 156788999999998876
No 122
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.88 E-value=0.003 Score=59.62 Aligned_cols=56 Identities=21% Similarity=0.304 Sum_probs=49.2
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~~l~~~~~~aDivisA~g 219 (229)
.++.||++.|||.|.+ |+.+|.+|..-|++|..+++.. .++.+.+++||+|+...+
T Consensus 147 ~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~P 212 (409)
T PRK11790 147 FEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVP 212 (409)
T ss_pred ccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCC
Confidence 5689999999999996 9999999999999999887532 268899999999998876
No 123
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=96.87 E-value=0.094 Score=48.36 Aligned_cols=146 Identities=16% Similarity=0.101 Sum_probs=99.2
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCC----CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV----SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~----~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD 127 (229)
+|..---+=..++.++|..+..+ +.+. ..|.+.+.++-|+.- +|+|.+--| .+-..+++.+.. +
T Consensus 56 pSTRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~~~~~~~a~~~----~-- 123 (334)
T PRK01713 56 TSTRTRCAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQSIVNELAEYA----G-- 123 (334)
T ss_pred CCchHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--chHHHHHHHHhC----C--
Confidence 45555556778899999998776 3222 226677777766655 889999865 322223333322 2
Q ss_pred ccCccchhhhhccCCCCCcccCCHHHHH-HHHHHhCCCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEEEcCCC----
Q 027064 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCL-ELLKRSGVTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTIVHSHT---- 201 (229)
Q Consensus 128 g~~~~N~g~l~~~~~~~~~~PcTa~av~-~lL~~~~~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv~~~~t---- 201 (229)
+--+|.+ .....||=+.+=+ .+.|+.+.+++|+++++||-. ..|.+.++.++..-|+.|++|.-.+
T Consensus 124 -vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~ 195 (334)
T PRK01713 124 -VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPE 195 (334)
T ss_pred -CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCC
Confidence 3344542 2346799887764 444555557999999999986 4489999999999999999986432
Q ss_pred ---------------------CCHHhhhccCcEEEEe
Q 027064 202 ---------------------TDPESIVREADIVIAA 217 (229)
Q Consensus 202 ---------------------~~l~~~~~~aDivisA 217 (229)
.|+.+.++.||+|.+-
T Consensus 196 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 196 ASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 2455788999999873
No 124
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=96.86 E-value=0.00044 Score=50.96 Aligned_cols=67 Identities=18% Similarity=0.338 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCc-cCcccccCccc
Q 027064 59 MKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISL-EKDVDGFHPLN 133 (229)
Q Consensus 59 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDg~~~~N 133 (229)
.-...++++|++..|..++ ++.+++.+.++.+.. +++.|+.|++|++ +.++..+|- ...+.-+.++|
T Consensus 14 ~hn~~f~~~g~~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~~VT~P~K-----~~~~~~~D~~~~~A~~igAvN 81 (83)
T PF08501_consen 14 IHNAAFEALGLDAVYIPFE--VEPEDLEDFLDALRA-PNFRGLNVTMPHK-----EAAIPYLDELSPSAKAIGAVN 81 (83)
T ss_dssp HHHHHHHHTTSSEEEEEEE--TSTTCHHHHHHHHHH-TTESEEEE-TTST-----THHGGGSSEE-HHHHHHTS-S
T ss_pred HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHhc-CCCCeeeecchHH-----HHHHHHhccCCHHHHHhCCcc
Confidence 3567899999999999887 555667777777666 6899999999999 477777764 33444444544
No 125
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.83 E-value=0.0062 Score=57.43 Aligned_cols=77 Identities=23% Similarity=0.283 Sum_probs=58.0
Q ss_pred cCCHHHHHHHHHHhC--CCCCCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC-------
Q 027064 148 PCTPKGCLELLKRSG--VTIKGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT------- 202 (229)
Q Consensus 148 PcTa~av~~lL~~~~--~~l~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~------- 202 (229)
...|.-++..++++- -+++||+|+|-|. |+.+|+.+|..|..+||+|+++++.+.
T Consensus 167 ~~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~ 246 (399)
T PRK05579 167 MAEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGV 246 (399)
T ss_pred CCCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCc
Confidence 345677766666542 4689999999999 776799999999999999999876421
Q ss_pred ---------CHH----hhhccCcEEEEecCCCCCC
Q 027064 203 ---------DPE----SIVREADIVIAAAGQAMMV 224 (229)
Q Consensus 203 ---------~l~----~~~~~aDivisA~g~p~~i 224 (229)
++. +.....|++|.+.|...|-
T Consensus 247 ~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 247 KRIDVESAQEMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred EEEccCCHHHHHHHHHHhcCCCCEEEEcccccccc
Confidence 111 2245689999999987764
No 126
>PLN02527 aspartate carbamoyltransferase
Probab=96.82 E-value=0.16 Score=46.25 Aligned_cols=150 Identities=14% Similarity=0.114 Sum_probs=102.1
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCC-CC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPE-QV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~-~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD 127 (229)
+|..---+=..++.++|..+.++.-.. +. ..|-+.+.++-|+.= +|+|.+-.| ++-...++.+..+
T Consensus 49 pStRTR~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~~~------ 118 (306)
T PLN02527 49 PSTRTRLSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHF--ESGAARRAAATAE------ 118 (306)
T ss_pred CCchhHHHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECC--ChhHHHHHHHhCC------
Confidence 366666677889999999998886542 11 136666666666655 789999866 3333344433321
Q ss_pred ccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc-h-hhhHHHHHHHhhC-CCEEEEEcCCC---
Q 027064 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS-N-IVGLPVSLLLLKA-DATVTIVHSHT--- 201 (229)
Q Consensus 128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s-~-~VG~pla~~L~~~-~atVtv~~~~t--- 201 (229)
+--+|.|- .....||=+.+=+--+++.-.+++|++|++||-+ . -|.+.++..|... |++|++|.-..
T Consensus 119 -vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~ 191 (306)
T PLN02527 119 -IPVINAGD------GPGQHPTQALLDVYTIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKM 191 (306)
T ss_pred -CCEEECCC------CCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 33455431 1346799888877777654447999999999976 3 3688888888776 89998875422
Q ss_pred ------------------CCHHhhhccCcEEEEec
Q 027064 202 ------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 202 ------------------~~l~~~~~~aDivisA~ 218 (229)
.|+.+.++.||+|.+-.
T Consensus 192 ~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 192 KDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred CHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 35678899999998843
No 127
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.82 E-value=0.0036 Score=56.86 Aligned_cols=64 Identities=27% Similarity=0.253 Sum_probs=48.4
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhh-CC-CEEEEEcCCC--------------------CCHHhhhccCcEEEEecCCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLK-AD-ATVTIVHSHT--------------------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~-~~-atVtv~~~~t--------------------~~l~~~~~~aDivisA~g~p~ 222 (229)
...+++.|||.|.. |++.+..+.. ++ .+|+++++.. .+..+.+++|||||++|+.+.
T Consensus 123 ~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~ 201 (314)
T PRK06141 123 KDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTE 201 (314)
T ss_pred CCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCC
Confidence 46899999999996 9999875543 44 5899998741 134567889999999999887
Q ss_pred C-CCCCCC
Q 027064 223 M-VTMGIL 229 (229)
Q Consensus 223 ~-i~~~~v 229 (229)
. ++.+|+
T Consensus 202 pvl~~~~l 209 (314)
T PRK06141 202 PLVRGEWL 209 (314)
T ss_pred CEecHHHc
Confidence 6 455553
No 128
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.81 E-value=0.3 Score=44.60 Aligned_cols=148 Identities=15% Similarity=0.157 Sum_probs=98.2
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCCCH----HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVSE----AELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~~----~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVD 127 (229)
+|..---+=..++.++|..+..+ +.+.++ |-+.+.++-|+.- .+|+|++-.| .+-..+++.+.++
T Consensus 55 pSTRTR~SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~~------ 123 (310)
T PRK13814 55 PSTRTRNSFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQLS------ 123 (310)
T ss_pred CcchhHHHHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhCC------
Confidence 45555556778899999977664 332222 4455555555433 2468887755 3333333333321
Q ss_pred ccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCC-EEEEEcCCC---
Q 027064 128 GFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADA-TVTIVHSHT--- 201 (229)
Q Consensus 128 g~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~a-tVtv~~~~t--- 201 (229)
..-.+|.|. .....||=+.+=+--+++.-.+++|++|++||-. .-|.+.+..+|..-|+ .|++|+-..
T Consensus 124 ~vPvINag~------g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p 197 (310)
T PRK13814 124 SGVVINAGD------GNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLP 197 (310)
T ss_pred CCCeEECCc------CCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCc
Confidence 244566541 2456799888877666655557999999999986 4579999999999998 898885432
Q ss_pred -----------CCHHhhhccCcEEEE
Q 027064 202 -----------TDPESIVREADIVIA 216 (229)
Q Consensus 202 -----------~~l~~~~~~aDivis 216 (229)
.++.+.++.||+|.+
T Consensus 198 ~~~~~~~~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 198 DKVGNDSIKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred CccccceEEEEcCHHHHhCCCCEEEE
Confidence 366788999999986
No 129
>PLN03139 formate dehydrogenase; Provisional
Probab=96.80 E-value=0.0038 Score=58.64 Aligned_cols=56 Identities=18% Similarity=0.259 Sum_probs=48.6
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g 219 (229)
.++.||+|.|||.|.+ |+.++..|..-|+.|..+++.. .++.+.+++||+|+...+
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCC
Confidence 4689999999999996 9999999999999999887531 267788999999998876
No 130
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.80 E-value=0.0041 Score=54.23 Aligned_cols=54 Identities=26% Similarity=0.310 Sum_probs=45.6
Q ss_pred CcccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcC
Q 027064 145 LFLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHS 199 (229)
Q Consensus 145 ~~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~ 199 (229)
...|.|++|+...++. .+.+++|++|+|.|.|. ||+.++.+|.++|++|+ ++++
T Consensus 5 ~~~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 5 GREEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCCccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 3457899888877665 46679999999999999 59999999999999877 8876
No 131
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.79 E-value=0.0024 Score=58.34 Aligned_cols=63 Identities=17% Similarity=0.182 Sum_probs=49.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHh-hCCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLL-KADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~-~~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p~ 222 (229)
.+++++|||.|.. |+..+..|. .++. +|+++++.. .++++.+++|||||+||+.+.
T Consensus 128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~ 206 (326)
T TIGR02992 128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET 206 (326)
T ss_pred CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence 5689999999996 999999887 4675 699997742 134567889999999999877
Q ss_pred C-CCCCCC
Q 027064 223 M-VTMGIL 229 (229)
Q Consensus 223 ~-i~~~~v 229 (229)
. |+.+|+
T Consensus 207 p~i~~~~l 214 (326)
T TIGR02992 207 PILHAEWL 214 (326)
T ss_pred cEecHHHc
Confidence 6 466664
No 132
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=96.76 E-value=0.0041 Score=60.47 Aligned_cols=58 Identities=21% Similarity=0.224 Sum_probs=49.9
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~ 220 (229)
+.++.||++.|||.|.+ |+.+|..|...|++|+.+++.. .++.+.+++||+|+.+++-
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPl 203 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPL 203 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCC
Confidence 45789999999999996 9999999999999999987531 2578889999999998873
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.74 E-value=0.0024 Score=62.01 Aligned_cols=77 Identities=21% Similarity=0.306 Sum_probs=58.3
Q ss_pred HHHHHHHHHhCC----------CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C---
Q 027064 152 KGCLELLKRSGV----------TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D--- 203 (229)
Q Consensus 152 ~av~~lL~~~~~----------~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~--- 203 (229)
.|+++-...++. .+.+.+|+|+|.|.+ |...+..+...||.|+++..+.. +
T Consensus 139 ~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e 217 (511)
T TIGR00561 139 RAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 217 (511)
T ss_pred HHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence 677777776653 234689999999995 99999999999999998865321 0
Q ss_pred -----------------------HHhhhccCcEEEEec---C--CCCCCCCCCC
Q 027064 204 -----------------------PESIVREADIVIAAA---G--QAMMVTMGIL 229 (229)
Q Consensus 204 -----------------------l~~~~~~aDivisA~---g--~p~~i~~~~v 229 (229)
+.+.++.+||||+++ | .|.+++.+|+
T Consensus 218 ~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv 271 (511)
T TIGR00561 218 EGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMV 271 (511)
T ss_pred cccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHH
Confidence 234578899999999 5 5667887663
No 134
>PLN02306 hydroxypyruvate reductase
Probab=96.73 E-value=0.0049 Score=57.85 Aligned_cols=56 Identities=20% Similarity=0.302 Sum_probs=46.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCC----------------------------CCCHHhhhccCcE
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSH----------------------------TTDPESIVREADI 213 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~----------------------------t~~l~~~~~~aDi 213 (229)
.++.||++.|||.|.+ |+.+|.+|. .-|++|...++. ..++.+.+++||+
T Consensus 161 ~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi 239 (386)
T PLN02306 161 NLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV 239 (386)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence 4689999999999996 999999985 789999877532 1267888999999
Q ss_pred EEEecC
Q 027064 214 VIAAAG 219 (229)
Q Consensus 214 visA~g 219 (229)
|+.+++
T Consensus 240 V~lh~P 245 (386)
T PLN02306 240 ISLHPV 245 (386)
T ss_pred EEEeCC
Confidence 998765
No 135
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.72 E-value=0.014 Score=57.21 Aligned_cols=130 Identities=19% Similarity=0.187 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHh
Q 027064 82 EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS 161 (229)
Q Consensus 82 ~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~ 161 (229)
.+||++.++++= |+ .++|.=-...-+-.++++... +++-.|| |+..+-.-++..|++.-++-.
T Consensus 229 ~defv~av~~~~--P~---~~Iq~EDf~~~naf~iL~kyr--~~i~~Fn----------DDiQGTaaV~lAgll~Alr~~ 291 (559)
T PTZ00317 229 LDEFMEAVSSRW--PN---AVVQFEDFSNNHCFDLLERYQ--NKYRCFN----------DDIQGTGAVIAAGFLNALKLS 291 (559)
T ss_pred HHHHHHHHHHhC--CC---eEEehhhcCCccHHHHHHHhc--cCCCEec----------ccchhHHHHHHHHHHHHHHHh
Confidence 367777777764 43 356554333333444444332 1222222 234555678889999999999
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhh----CCC-------EEEEEcCCC-----------------------------
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADA-------TVTIVHSHT----------------------------- 201 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~----~~a-------tVtv~~~~t----------------------------- 201 (229)
+.+++.-++++.|+|.. |-.+|.+|.. .|. .+++|+++-
T Consensus 292 g~~l~d~riv~~GAGsA-giGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~ 370 (559)
T PTZ00317 292 GVPPEEQRIVFFGAGSA-AIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSL 370 (559)
T ss_pred CCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccC
Confidence 99999999999999998 9999998874 576 688886631
Q ss_pred CCHHhhhccC--cEEEEecCCCCCCCCCCC
Q 027064 202 TDPESIVREA--DIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 ~~l~~~~~~a--DivisA~g~p~~i~~~~v 229 (229)
.+|.+.++.+ |++|-++|.|+.+++|+|
T Consensus 371 ~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv 400 (559)
T PTZ00317 371 KTLEDVVRFVKPTALLGLSGVGGVFTEEVV 400 (559)
T ss_pred CCHHHHHhccCCCEEEEecCCCCCCCHHHH
Confidence 1466777888 999999999999998764
No 136
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.71 E-value=0.0027 Score=54.85 Aligned_cols=60 Identities=35% Similarity=0.484 Sum_probs=46.6
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CC-----------------HHhhhccCcEEEEecCCCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TD-----------------PESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~-----------------l~~~~~~aDivisA~g~p~~ 223 (229)
.+++||+|+|||.|. ||.-=+.+|++.||+|++..-.. +. ..+.+..+++||.||+.+.+
T Consensus 8 ~~l~~k~VlvvGgG~-va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~l 85 (210)
T COG1648 8 LDLEGKKVLVVGGGS-VALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEEL 85 (210)
T ss_pred EEcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHH
Confidence 468999999999999 59999999999999998874432 11 11445569999999987643
No 137
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.71 E-value=0.0017 Score=51.85 Aligned_cols=52 Identities=31% Similarity=0.401 Sum_probs=40.1
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEEEecC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivisA~g 219 (229)
--+|.|||+|. ||..|+..|.+.|..|.-+.+++. ++.+.+++||++|-++.
T Consensus 10 ~l~I~iIGaGr-VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavp 77 (127)
T PF10727_consen 10 RLKIGIIGAGR-VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVP 77 (127)
T ss_dssp --EEEEECTSC-CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-
T ss_pred ccEEEEECCCH-HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEec
Confidence 35899999999 599999999999999988876542 34477899999999876
No 138
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.70 E-value=0.0039 Score=55.53 Aligned_cols=53 Identities=26% Similarity=0.400 Sum_probs=43.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC--------------------------------------CCCHHhhhc
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH--------------------------------------TTDPESIVR 209 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~--------------------------------------t~~l~~~~~ 209 (229)
++|.|||.|.+ |.++|..|++.|..|++++.. +.++.+.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 58999999996 999999999999999998653 223446688
Q ss_pred cCcEEEEecCCC
Q 027064 210 EADIVIAAAGQA 221 (229)
Q Consensus 210 ~aDivisA~g~p 221 (229)
+||+||.|++..
T Consensus 81 ~aD~Vi~avpe~ 92 (288)
T PRK09260 81 DADLVIEAVPEK 92 (288)
T ss_pred CCCEEEEeccCC
Confidence 999999998754
No 139
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.69 E-value=0.0041 Score=58.44 Aligned_cols=57 Identities=26% Similarity=0.472 Sum_probs=45.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-CCHH--------------------hhhccCcEEEEecCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-TDPE--------------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~~l~--------------------~~~~~aDivisA~g~p 221 (229)
+++||+|+|+|.|. .|.++|..|+++|+.|+++++.. ..+. +....+|+||.++|.+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVP 79 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence 46899999999999 69999999999999999998753 2111 1124689999999864
No 140
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.67 E-value=0.0053 Score=56.10 Aligned_cols=64 Identities=19% Similarity=0.150 Sum_probs=48.4
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p 221 (229)
...++++|||.|.. |+..+..|.. ++. .|+++++.. .++.+.+++|||||+||+.+
T Consensus 130 ~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~ 208 (330)
T PRK08291 130 EDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSE 208 (330)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCC
Confidence 35689999999997 9998777774 554 788887641 24557788999999999987
Q ss_pred CC-CCCCCC
Q 027064 222 MM-VTMGIL 229 (229)
Q Consensus 222 ~~-i~~~~v 229 (229)
.. ++.+|+
T Consensus 209 ~p~i~~~~l 217 (330)
T PRK08291 209 EPILKAEWL 217 (330)
T ss_pred CcEecHHHc
Confidence 66 455553
No 141
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.67 E-value=0.0016 Score=57.90 Aligned_cols=79 Identities=24% Similarity=0.367 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhC----CCE-------EEEEcCCC-----------------
Q 027064 150 TPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKA----DAT-------VTIVHSHT----------------- 201 (229)
Q Consensus 150 Ta~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~----~at-------Vtv~~~~t----------------- 201 (229)
|-.|++.-++-.+.+|+.-+++++|+|.. |-.++.+|... |.+ +++++++-
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 45788999999999999999999999997 99999888765 773 88887741
Q ss_pred ---------CCHHhhhccC--cEEEEecCCCCCCCCCCC
Q 027064 202 ---------TDPESIVREA--DIVIAAAGQAMMVTMGIL 229 (229)
Q Consensus 202 ---------~~l~~~~~~a--DivisA~g~p~~i~~~~v 229 (229)
.+|.+.++.+ |++|-.+|.|+.++.|||
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv 125 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVV 125 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHH
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHH
Confidence 1577889999 999999999999998764
No 142
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.66 E-value=0.005 Score=59.85 Aligned_cols=58 Identities=17% Similarity=0.205 Sum_probs=49.7
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CC-----------CHHhhhccCcEEEEecCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TT-----------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~-----------~l~~~~~~aDivisA~g~p 221 (229)
.++.||++.|||.|.+ |+.+|..|...|++|..+++. +. ++.+.+++||+|+.+++..
T Consensus 136 ~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t 205 (526)
T PRK13581 136 VELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLT 205 (526)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCC
Confidence 4689999999999996 999999999999999988763 11 5678899999999998753
No 143
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.65 E-value=0.0046 Score=56.97 Aligned_cols=54 Identities=20% Similarity=0.281 Sum_probs=45.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g 219 (229)
++||+|.|||.|.+ |.+++..|...|..|.+..+.. .+..+.+++||+|+.+++
T Consensus 15 L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVP 82 (330)
T PRK05479 15 IKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLP 82 (330)
T ss_pred hCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCC
Confidence 67999999999996 9999999999999988865431 145577899999999986
No 144
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.65 E-value=0.0036 Score=54.69 Aligned_cols=59 Identities=10% Similarity=0.238 Sum_probs=44.6
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHH-----------------hhhccCcEEEEecCCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPE-----------------SIVREADIVIAAAGQAM 222 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~-----------------~~~~~aDivisA~g~p~ 222 (229)
++++|++|+|||.|.+ +.-=+..|++.||.||++... ++.+. +.+..+++||.||+-|.
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~ 97 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEK 97 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHH
Confidence 4567999999999995 777777888899999998443 32221 33678899999998653
No 145
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=96.63 E-value=0.0057 Score=54.39 Aligned_cols=56 Identities=27% Similarity=0.312 Sum_probs=46.6
Q ss_pred CCcccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064 144 PLFLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH 200 (229)
Q Consensus 144 ~~~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~ 200 (229)
.+--+.|.+|++..++. .+.+++|++|+|-|.|+ ||..++.+|.+.|++|+ +++++
T Consensus 11 ~gR~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~e~GakvvaVsD~~ 71 (254)
T cd05313 11 LIRPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGN-VAQYAAEKLLELGAKVVTLSDSK 71 (254)
T ss_pred CCCCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 34458898888776654 57889999999999999 59999999999999876 88753
No 146
>PRK09414 glutamate dehydrogenase; Provisional
Probab=96.63 E-value=0.019 Score=54.89 Aligned_cols=53 Identities=26% Similarity=0.263 Sum_probs=44.4
Q ss_pred cccCCHHHHHHHHHH----hCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE-cC
Q 027064 146 FLPCTPKGCLELLKR----SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV-HS 199 (229)
Q Consensus 146 ~~PcTa~av~~lL~~----~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~-~~ 199 (229)
--+.|.+|+...++. .+.+++|++|+|.|.|+ ||.-+|.+|.+.|++|+.+ ++
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVavsDs 264 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTCSDS 264 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcC
Confidence 457898888776665 47889999999999999 5999999999999987765 53
No 147
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.62 E-value=0.0033 Score=50.68 Aligned_cols=54 Identities=22% Similarity=0.440 Sum_probs=43.3
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecCCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p~ 222 (229)
||+|||+++.||..++.+|..++. .+.+++.... +..+.+++|||||.+.|.|.
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~~ 81 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVPR 81 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEeccccc
Confidence 799999955589999999998876 5777766421 33467999999999999874
No 148
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.54 E-value=0.015 Score=52.67 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=48.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCC-------------------CCHHhhhccCcEEEEecCCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHT-------------------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t-------------------~~l~~~~~~aDivisA~g~p~ 222 (229)
+...++++|||.|.. |+..+..|.. ++. .|.++++.- .+..+.+++|||||+||+.++
T Consensus 122 ~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~ 200 (304)
T PRK07340 122 PAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRT 200 (304)
T ss_pred CCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCC
Confidence 346799999999996 9999999864 565 688887631 145567889999999999998
Q ss_pred CC
Q 027064 223 MV 224 (229)
Q Consensus 223 ~i 224 (229)
.+
T Consensus 201 Pl 202 (304)
T PRK07340 201 PV 202 (304)
T ss_pred ce
Confidence 85
No 149
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.51 E-value=0.38 Score=43.86 Aligned_cols=152 Identities=16% Similarity=0.193 Sum_probs=99.7
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCccccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~ 129 (229)
+|..---+=..++.++|..+..+.-.+. ...|-+.+.++-|+.= ++|+|.+--| .+-...++.+. -.+
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~--~~~~~~~~a~~-------~~v 124 (305)
T PRK00856 55 PSTRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHP--QSGAARLLAES-------SDV 124 (305)
T ss_pred CCcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCC--ChHHHHHHHHH-------CCC
Confidence 4666666778899999999877643211 1114455555555432 2679999866 33222333332 123
Q ss_pred CccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCC-------
Q 027064 130 HPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSH------- 200 (229)
Q Consensus 130 ~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~------- 200 (229)
--+|.|- .....||=+.+=+--+.+.-..++|++|++||-. +-|.+.++.++..-|++|++|+-.
T Consensus 125 PVINa~~------g~~~HPtQ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~ 198 (305)
T PRK00856 125 PVINAGD------GSHQHPTQALLDLLTIREEFGRLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM 198 (305)
T ss_pred CEEECCC------CCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence 4455431 1346799887765555544347999999999986 457999999999999999998643
Q ss_pred -----CCCHHhhhccCcEEEEecC
Q 027064 201 -----TTDPESIVREADIVIAAAG 219 (229)
Q Consensus 201 -----t~~l~~~~~~aDivisA~g 219 (229)
+.++.+.++.||+|.+-..
T Consensus 199 ~~~~~~~d~~ea~~~aDvvyt~~~ 222 (305)
T PRK00856 199 PEYGVHTDLDEVIEDADVVMMLRV 222 (305)
T ss_pred cceEEECCHHHHhCCCCEEEECCc
Confidence 2356788999999988553
No 150
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.50 E-value=0.0097 Score=54.28 Aligned_cols=62 Identities=18% Similarity=0.236 Sum_probs=47.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHh-hCCC-EEEEEcCCC---------------------CCHHhhhccCcEEEEecCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLL-KADA-TVTIVHSHT---------------------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~-~~~a-tVtv~~~~t---------------------~~l~~~~~~aDivisA~g~p~ 222 (229)
..++++|||.|.. |+..+..|. .+++ .|.++++.. .++++.+++||+||+||+.++
T Consensus 126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT 204 (325)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence 5789999999996 988876664 4566 688887631 135567889999999999988
Q ss_pred CC-CCCCC
Q 027064 223 MV-TMGIL 229 (229)
Q Consensus 223 ~i-~~~~v 229 (229)
.+ . +|+
T Consensus 205 p~i~-~~l 211 (325)
T PRK08618 205 PVFS-EKL 211 (325)
T ss_pred cchH-Hhc
Confidence 74 6 664
No 151
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.50 E-value=0.0079 Score=52.10 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=40.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC
Q 027064 152 KGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT 201 (229)
Q Consensus 152 ~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t 201 (229)
.++.+.+++.+.+++|++|+|.|-|+ ||+.++.+|.++|+ .|.++++..
T Consensus 8 ~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 8 VAMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence 34445566677889999999999999 59999999999988 577787654
No 152
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.50 E-value=0.0068 Score=54.74 Aligned_cols=55 Identities=24% Similarity=0.429 Sum_probs=43.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------CH-----------------HhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------DP-----------------ESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------~l-----------------~~~~~~aDivisA~g~p 221 (229)
++|+|||.|. ||..++..|+.+|. .++++++... ++ .+.++.||+||.++|.|
T Consensus 1 ~kI~IIGaG~-vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGH-VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 4899999988 59999999999984 6888876321 11 14478999999999987
Q ss_pred CC
Q 027064 222 MM 223 (229)
Q Consensus 222 ~~ 223 (229)
.-
T Consensus 80 ~~ 81 (306)
T cd05291 80 QK 81 (306)
T ss_pred CC
Confidence 43
No 153
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=96.49 E-value=0.23 Score=45.91 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=102.8
Q ss_pred EEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhc
Q 027064 42 LAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGE 119 (229)
Q Consensus 42 LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~ 119 (229)
++.+..- .|..---+=..++.++|..+.++.-... ...|.+.+.++-|+.- +|+|.+-.| .+-..+++.+.
T Consensus 48 l~~lF~e---pSTRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~~~~~~~a~~ 120 (336)
T PRK03515 48 IALIFEK---DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQEIVETLAEY 120 (336)
T ss_pred EEEEecC---CChhHHHHHHHHHHHcCCcEEEeCCccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--ChHHHHHHHHh
Confidence 5554432 4666666777889999999888642210 1126677777777655 789999866 33333344333
Q ss_pred CCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHH-hC-CCCCCCeEEEEccc-hhhhHHHHHHHhhCCCEEEE
Q 027064 120 ISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SG-VTIKGKRAVVVGRS-NIVGLPVSLLLLKADATVTI 196 (229)
Q Consensus 120 I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~-~~-~~l~gk~v~ViG~s-~~VG~pla~~L~~~~atVtv 196 (229)
. . +--+|.+ .....||=+.+=+--+++ .+ .+++|++++.||-. ..|.+.+..++...|+.+++
T Consensus 121 ~----~---vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~ 186 (336)
T PRK03515 121 A----G---VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRL 186 (336)
T ss_pred C----C---CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEE
Confidence 2 1 3334532 234679988776655544 44 36999999999975 34799999999999999999
Q ss_pred EcCCC-------------------------CCHHhhhccCcEEEEe
Q 027064 197 VHSHT-------------------------TDPESIVREADIVIAA 217 (229)
Q Consensus 197 ~~~~t-------------------------~~l~~~~~~aDivisA 217 (229)
|+-.. .++.+.++.||+|.+-
T Consensus 187 ~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 187 VAPKACWPEAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred ECCchhcCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 85432 2455778999999874
No 154
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.46 E-value=0.0068 Score=56.42 Aligned_cols=54 Identities=22% Similarity=0.338 Sum_probs=45.6
Q ss_pred CCeEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-CCHHhhhccCcEEEEecCCC
Q 027064 167 GKRAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 167 gk~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-~~l~~~~~~aDivisA~g~p 221 (229)
.++|+||| .|. +|.+++..|.++|..|+++++.. .+..+.+++||+||.|++..
T Consensus 98 ~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~ 153 (374)
T PRK11199 98 LRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIH 153 (374)
T ss_pred cceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHH
Confidence 48999999 666 59999999999999999998754 35667789999999998743
No 155
>PLN02477 glutamate dehydrogenase
Probab=96.40 E-value=0.0083 Score=56.80 Aligned_cols=54 Identities=20% Similarity=0.263 Sum_probs=45.4
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064 146 FLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH 200 (229)
Q Consensus 146 ~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~ 200 (229)
--+.|++|+...++ +++.+++|++|+|.|.|+ ||+.++.+|.++|++|+ ++++.
T Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 181 REAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CCccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence 34678888776655 467899999999999999 59999999999999877 77775
No 156
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.39 E-value=0.0091 Score=54.55 Aligned_cols=54 Identities=20% Similarity=0.319 Sum_probs=43.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CC-------------CHHhhhccCcEEEEecC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TT-------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~-------------~l~~~~~~aDivisA~g 219 (229)
++||+|.|||.|.+ |.+++..|.+.|..|++..+. .. +..+.+++||+|+.++.
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVp 68 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLP 68 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCC
Confidence 57999999999996 999999999999887765332 11 34466889999999987
No 157
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.38 E-value=0.0058 Score=45.06 Aligned_cols=51 Identities=31% Similarity=0.431 Sum_probs=39.6
Q ss_pred eEEEEccchhhhHHHHHHHhhCC---CEEEEE-cCCCC----------------CHHhhhccCcEEEEecCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKAD---ATVTIV-HSHTT----------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~---atVtv~-~~~t~----------------~l~~~~~~aDivisA~g~ 220 (229)
++.+||.|.+ |..++.-|.+.| .+|+++ +++.. +..+.+++||+||.|+.-
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p 71 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKP 71 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-G
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECH
Confidence 5889999996 999999999999 899965 55321 355778899999998753
No 158
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.37 E-value=0.011 Score=54.19 Aligned_cols=56 Identities=21% Similarity=0.306 Sum_probs=48.2
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CHHhhhccCcEEEEecC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l~~~~~~aDivisA~g 219 (229)
.++.||++-|||.|.+ |+.+|+.|..-|+.|...+++.. ++.+.+++||+|+...+
T Consensus 142 ~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~P 209 (324)
T COG1052 142 FDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCP 209 (324)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCC
Confidence 4789999999999996 99999999988999988876531 47789999999988765
No 159
>PRK14030 glutamate dehydrogenase; Provisional
Probab=96.37 E-value=0.04 Score=52.77 Aligned_cols=50 Identities=26% Similarity=0.292 Sum_probs=42.3
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEE
Q 027064 146 FLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTI 196 (229)
Q Consensus 146 ~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv 196 (229)
--+.|.+|++..++ +.+.+++|++|+|=|.|+ ||..+|.+|.+.||+|+.
T Consensus 203 r~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVa 256 (445)
T PRK14030 203 RPEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVT 256 (445)
T ss_pred CCCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEE
Confidence 34579988876554 567899999999999999 599999999999998766
No 160
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.35 E-value=0.0086 Score=53.29 Aligned_cols=52 Identities=17% Similarity=0.329 Sum_probs=43.8
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p 221 (229)
+|.|||.|.+ |.+++..|.+.|..|+++++.. .+..+.++++|+||.+++.+
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCH
Confidence 4789999996 9999999999999999998752 24557789999999998753
No 161
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=96.32 E-value=0.0042 Score=52.42 Aligned_cols=54 Identities=26% Similarity=0.380 Sum_probs=36.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------------------CHHhhhccCcE
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------------------DPESIVREADI 213 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------------------~l~~~~~~aDi 213 (229)
++|+|||-|- ||.|+|..|++.|.+|+.++.... +..+.+++||+
T Consensus 1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 4899999999 599999999999999999955321 23355889999
Q ss_pred EEEecCCCC
Q 027064 214 VIAAAGQAM 222 (229)
Q Consensus 214 visA~g~p~ 222 (229)
+|.++|-|-
T Consensus 80 ~~I~VpTP~ 88 (185)
T PF03721_consen 80 VFICVPTPS 88 (185)
T ss_dssp EEE----EB
T ss_pred EEEecCCCc
Confidence 999998763
No 162
>PRK06398 aldose dehydrogenase; Validated
Probab=96.32 E-value=0.012 Score=50.87 Aligned_cols=59 Identities=25% Similarity=0.253 Sum_probs=45.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------C------HHhhh-------ccCcEEEEecCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------D------PESIV-------READIVIAAAGQ 220 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------~------l~~~~-------~~aDivisA~g~ 220 (229)
+++||+++|.|.+.-+|+.++..|.++|++|+++.+... | +.+.+ ..-|++|...|.
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~ 82 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI 82 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 478999999999999999999999999999988755321 1 11112 246999999886
Q ss_pred CC
Q 027064 221 AM 222 (229)
Q Consensus 221 p~ 222 (229)
+.
T Consensus 83 ~~ 84 (258)
T PRK06398 83 ES 84 (258)
T ss_pred CC
Confidence 43
No 163
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.31 E-value=0.011 Score=51.23 Aligned_cols=54 Identities=30% Similarity=0.318 Sum_probs=45.3
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------CHHhhhccCcEEEEecCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------DPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------~l~~~~~~aDivisA~g~p~ 222 (229)
+.+.|+|+|++ |..++..|...|.+|++-+|+.+ ...+..+.|||||.|++-+.
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a 72 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEA 72 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHH
Confidence 57899999996 99999999999999999977654 23467888999999987443
No 164
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.30 E-value=0.01 Score=52.90 Aligned_cols=52 Identities=31% Similarity=0.366 Sum_probs=43.0
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC---------------------------------------CCCHHhhh
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH---------------------------------------TTDPESIV 208 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~---------------------------------------t~~l~~~~ 208 (229)
++|.|||.|.+ |..+|..|++.|..|++++.. |.++.+.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 58999999996 999999999999999998542 23455667
Q ss_pred ccCcEEEEecCC
Q 027064 209 READIVIAAAGQ 220 (229)
Q Consensus 209 ~~aDivisA~g~ 220 (229)
+.||+||.|+..
T Consensus 83 ~~aDlVieavpe 94 (287)
T PRK08293 83 KDADLVIEAVPE 94 (287)
T ss_pred cCCCEEEEeccC
Confidence 899999999873
No 165
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.27 E-value=0.0055 Score=59.53 Aligned_cols=48 Identities=17% Similarity=0.177 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCC----------CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 151 PKGCLELLKRSGV----------TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 151 a~av~~lL~~~~~----------~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
..|+++-.++++. ...|.+|+|+|.|.+ |...+..+...||.|++++.
T Consensus 139 y~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~ 196 (509)
T PRK09424 139 YRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDT 196 (509)
T ss_pred HHHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeC
Confidence 3778877777653 346899999999995 99999999999998887755
No 166
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.26 E-value=0.0085 Score=48.74 Aligned_cols=52 Identities=29% Similarity=0.414 Sum_probs=42.6
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------------CHHhhhccCcEEEEecCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------------~l~~~~~~aDivisA~g~p 221 (229)
|+|+|+++.+|+.++..|+++|+.|+..-|... .+.+.++.+|.||.+.|.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence 789999888999999999999999988755422 1346678899999998854
No 167
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.011 Score=51.09 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++|+.++|.|++..+|+.++..|+++|++|+++.+.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999999999999999999999999999988653
No 168
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.17 E-value=0.025 Score=53.23 Aligned_cols=77 Identities=23% Similarity=0.351 Sum_probs=58.5
Q ss_pred cCCHHHHHHHHHHhC---CCCCCCeEEEEccc----------------hhhhHHHHHHHhhCCCEEEEEcCCCC------
Q 027064 148 PCTPKGCLELLKRSG---VTIKGKRAVVVGRS----------------NIVGLPVSLLLLKADATVTIVHSHTT------ 202 (229)
Q Consensus 148 PcTa~av~~lL~~~~---~~l~gk~v~ViG~s----------------~~VG~pla~~L~~~~atVtv~~~~t~------ 202 (229)
++++.-++..+.+.- -+++||+|+|-|.+ +-.|..+|..|..+||+|+++++...
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 778888877777542 46899999999983 34699999999999999999876421
Q ss_pred ----------CH-H----hhhccCcEEEEecCCCCCC
Q 027064 203 ----------DP-E----SIVREADIVIAAAGQAMMV 224 (229)
Q Consensus 203 ----------~l-~----~~~~~aDivisA~g~p~~i 224 (229)
++ . +...+.|++|.+.|...|-
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~ 279 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFK 279 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEcccccccc
Confidence 12 1 2234689999999988774
No 169
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=96.17 E-value=0.99 Score=42.70 Aligned_cols=167 Identities=18% Similarity=0.202 Sum_probs=103.1
Q ss_pred eEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC--CCHHHHHHHHHHhcCCCCCcEEEEeCCC---CCCCCHHH
Q 027064 41 GLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ--VSEAELISKVHELNVMPDVHGILVQLPL---PKHINEEK 115 (229)
Q Consensus 41 ~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~--~~~~el~~~I~~lN~d~~v~GIlvq~Pl---p~~i~~~~ 115 (229)
++++..+-+ .|..---+=.-++.++|..+.++.-..+ ...|-+.+.++-|+.- +|+|.+-.|- ..+-..++
T Consensus 60 ~~~~~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e 135 (395)
T PRK07200 60 GLGISVFRD--NSTRTRFSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE 135 (395)
T ss_pred CeEEEEEcC--CCchhHHHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence 444333332 5666666778899999999888753221 0115566666666655 7899998774 22222233
Q ss_pred HHhcCCc--cCcc-cccCc-cchhhhhccCCCCCcccCCHHHHHHHH-HHhCC--CCCCCeEEEEc-------cchhhhH
Q 027064 116 VLGEISL--EKDV-DGFHP-LNIGKLAMKGRDPLFLPCTPKGCLELL-KRSGV--TIKGKRAVVVG-------RSNIVGL 181 (229)
Q Consensus 116 i~~~I~p--~KDV-Dg~~~-~N~g~l~~~~~~~~~~PcTa~av~~lL-~~~~~--~l~gk~v~ViG-------~s~~VG~ 181 (229)
+.+...- .++| ...-| +|.+ + ....||=+.+=+--+ |+.|. .++|++|+++| ++..|.+
T Consensus 136 la~~~~~~~~~~~~~~~pPVINa~----~---~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~ 208 (395)
T PRK07200 136 VGAAVDDGYKQGVLPQRPTLVNLQ----C---DIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ 208 (395)
T ss_pred HHHHhhhhcccccccCCCeEEECC----C---CCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence 3222210 0111 11222 5652 2 246699887765544 45553 28999999985 4557789
Q ss_pred HHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064 182 PVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 182 pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~ 218 (229)
.++.+|..-|++|++|+-.. .|+.+.++.||+|.+-+
T Consensus 209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 99999999999999986432 25567889999998763
No 170
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed
Probab=96.14 E-value=0.41 Score=44.19 Aligned_cols=191 Identities=16% Similarity=0.138 Sum_probs=114.6
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCCCC-------
Q 027064 11 IIDGKAVAQTIRSEIAEEVRLLSEKY----GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQ------- 79 (229)
Q Consensus 11 il~G~~la~~i~~~i~~~~~~l~~~~----~~~P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~------- 79 (229)
+|+-+.+.++=.+.+-+....++... -....++.+.. ..|..---+=..++.++|-.+..+.-...
T Consensus 6 ll~i~dl~~~ei~~ll~~A~~~k~~~~~~~L~gk~l~~lF~---epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~ 82 (335)
T PRK04523 6 FLNTQDWSRAELDALLTQAAAFKRNKLGSALKGKSIALVFF---NPSLRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFE 82 (335)
T ss_pred cCchhhCCHHHHHHHHHHHHHHHhcccCccCCCCEEEEEEc---CCCchhHHHHHHHHHHcCCeEEEeCcccccchhhcc
Confidence 44545555444444545455554321 01124555443 34655556677889999999887754322
Q ss_pred -------CCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCC-----HHHHHhcCCccCcccccCccchhhhhccCCCCCcc
Q 027064 80 -------VSEAELISKVHELNVMPDVHGILVQLPLPKHIN-----EEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFL 147 (229)
Q Consensus 80 -------~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~-----~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~ 147 (229)
...|.+.+.++-|+.- +|+|.+-.|-. +.+ +...++.+...-+ +--+|.| .. +.
T Consensus 83 ~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~-g~~~~~~~~~~~~~~~a~~s~---vPVINa~-------~~-~H 148 (335)
T PRK04523 83 LGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPK-FVDWSKDRQDQVLNSFAKYST---VPVINME-------TI-TH 148 (335)
T ss_pred cccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCcc-ccccccchhHHHHHHHHHhCC---CCEEECC-------CC-CC
Confidence 1235666666666655 78999986522 111 0112222222112 3344542 23 77
Q ss_pred cCCHHHHHHHHHHhCCCC-CCCeEEEEccc------hhhhHHHHHHHhhCCCEEEEEcC-CC------------------
Q 027064 148 PCTPKGCLELLKRSGVTI-KGKRAVVVGRS------NIVGLPVSLLLLKADATVTIVHS-HT------------------ 201 (229)
Q Consensus 148 PcTa~av~~lL~~~~~~l-~gk~v~ViG~s------~~VG~pla~~L~~~~atVtv~~~-~t------------------ 201 (229)
||=+.+=+--+++.-.++ +|++++|++.| ..|.+.++.+|..-|++|++|+- ..
T Consensus 149 PtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~ 228 (335)
T PRK04523 149 PCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALLIATRLGMDVTLLCPTPDYILDERYMDWAEQNAAES 228 (335)
T ss_pred hHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHHHHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHc
Confidence 998888777776554568 89999886532 24688999999999999999876 22
Q ss_pred -------CCHHhhhccCcEEEEec
Q 027064 202 -------TDPESIVREADIVIAAA 218 (229)
Q Consensus 202 -------~~l~~~~~~aDivisA~ 218 (229)
.++.+.++.||+|..-.
T Consensus 229 g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 229 GGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred CCeEEEEcCHHHHhCCCCEEEece
Confidence 24567799999998754
No 171
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.013 Score=50.07 Aligned_cols=38 Identities=29% Similarity=0.449 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++.||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~ 42 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR 42 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999989999999999999999988653
No 172
>PRK10637 cysG siroheme synthase; Provisional
Probab=96.13 E-value=0.0082 Score=57.36 Aligned_cols=59 Identities=20% Similarity=0.284 Sum_probs=45.5
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC-CCCHH-----------------hhhccCcEEEEecCCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH-TTDPE-----------------SIVREADIVIAAAGQAM 222 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~-t~~l~-----------------~~~~~aDivisA~g~p~ 222 (229)
++++||+|+|||.|.+ +.-=+..|++.||.||++-.. ++++. +.+..+++||.||+-+.
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~ 84 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDA 84 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHH
Confidence 5789999999999995 777677888899999998432 22221 34678999999998654
No 173
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=96.13 E-value=0.59 Score=43.24 Aligned_cols=151 Identities=17% Similarity=0.071 Sum_probs=95.9
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCC---CHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQV---SEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~---~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg 128 (229)
.|..---+=..++.++|..+.++.=+.+. ..|-+.+.++-|+.= +|+|++--| .+-...++.+.. .
T Consensus 54 pSTRTR~SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~--~~~~~~~~a~~~-------~ 122 (338)
T PRK08192 54 PSTRTRVSFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHP--DAGSVKEFAEGS-------R 122 (338)
T ss_pred CCcchHHHHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCC--chhHHHHHHHhC-------C
Confidence 45555556778899999998764212221 125566666666555 789999865 333223333321 1
Q ss_pred cCccchhhhhccCCCCCcccCCHHHHHHHHHHh----CCCCCCCeEEEEccc--hhhhHHHHHHHhhC-CCEEEEEcCCC
Q 027064 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRS----GVTIKGKRAVVVGRS--NIVGLPVSLLLLKA-DATVTIVHSHT 201 (229)
Q Consensus 129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~----~~~l~gk~v~ViG~s--~~VG~pla~~L~~~-~atVtv~~~~t 201 (229)
+--+|.|- .....||=+.+=+--+++. |.+++|++|++||-+ +-|...++..|... |+.|++|+-..
T Consensus 123 vPVINa~~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~ 196 (338)
T PRK08192 123 VPVINGGD------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKE 196 (338)
T ss_pred CCEEECCC------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCcc
Confidence 33455431 1356799888866666543 347899999999996 44678877766644 88988885432
Q ss_pred ---------------------CCHHhhhccCcEEEEecC
Q 027064 202 ---------------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 202 ---------------------~~l~~~~~~aDivisA~g 219 (229)
.|+.+.++.||+|.+-.+
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~~ 235 (338)
T PRK08192 197 LAMPDYVISDIENAGHKITITDQLEGNLDKADILYLTRI 235 (338)
T ss_pred ccCCHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEEcCc
Confidence 356688999999998543
No 174
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.12 E-value=0.55 Score=44.87 Aligned_cols=151 Identities=17% Similarity=0.102 Sum_probs=98.4
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccc
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg 128 (229)
.|..---+=..++.++|..+.++.-+.+.+ .|-+.+..+-|+.= +|+|++-.| .+-...++.+.. .
T Consensus 136 pSTRTR~SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~ 204 (429)
T PRK11891 136 ASTRTRVSFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------N 204 (429)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------C
Confidence 365555677788999999988774222111 24455555555544 788988865 333334443332 1
Q ss_pred cCccchhhhhccCCCCCcccCCHHHHHHHHH-HhC--C-CCCCCeEEEEccc--hhhhHHHHHHHhhC-CCEEEEEcCCC
Q 027064 129 FHPLNIGKLAMKGRDPLFLPCTPKGCLELLK-RSG--V-TIKGKRAVVVGRS--NIVGLPVSLLLLKA-DATVTIVHSHT 201 (229)
Q Consensus 129 ~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~-~~~--~-~l~gk~v~ViG~s--~~VG~pla~~L~~~-~atVtv~~~~t 201 (229)
+--+|.| + ...+.||=+.+=+--++ +.+ . .++|++|++||-. +-|...++.+|... |+.|++|.-..
T Consensus 205 vPVINAg-----d-g~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~ 278 (429)
T PRK11891 205 LPVINGG-----D-GPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPT 278 (429)
T ss_pred CCEEECC-----C-CCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCc
Confidence 3445543 1 14567998877655554 443 2 4899999999996 45689998888775 99999885432
Q ss_pred ---------------------CCHHhhhccCcEEEEecC
Q 027064 202 ---------------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 202 ---------------------~~l~~~~~~aDivisA~g 219 (229)
.|+.+.++.||+|.+..+
T Consensus 279 ~~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 279 LEMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRI 317 (429)
T ss_pred cccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence 356688999999998554
No 175
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.10 E-value=0.016 Score=51.96 Aligned_cols=54 Identities=19% Similarity=0.315 Sum_probs=44.9
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p~ 222 (229)
++|.|||.|.+ |.+++..|++.|..|+++++.. .+..+..+++|+||.++..+.
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~ 69 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGD 69 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHH
Confidence 37999999996 9999999999999999997742 245567889999999987653
No 176
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.10 E-value=0.015 Score=55.24 Aligned_cols=56 Identities=23% Similarity=0.332 Sum_probs=43.8
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------CH-------------HhhhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------DP-------------ESIVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------~l-------------~~~~~~aDivisA~g~p 221 (229)
+.||+|.|+|.|.. |++++.+|.++|++|++++.... .+ .+.+..+|.||...|.|
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~ 88 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMR 88 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence 46899999999997 99999999999999999986421 11 12346789888876654
No 177
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.08 E-value=0.013 Score=52.65 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=42.7
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------------------CCHHhhhccCcEE
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------------------TDPESIVREADIV 214 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------------------~~l~~~~~~aDiv 214 (229)
++|.|||.|.+ |.+++..|++.|..|++++... .+..+.++++|+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 68999999996 9999999999999999986421 2344557889999
Q ss_pred EEecCCC
Q 027064 215 IAAAGQA 221 (229)
Q Consensus 215 isA~g~p 221 (229)
|.|+...
T Consensus 84 i~av~~~ 90 (311)
T PRK06130 84 IEAVPEK 90 (311)
T ss_pred EEeccCc
Confidence 9998643
No 178
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=96.08 E-value=0.64 Score=43.35 Aligned_cols=157 Identities=17% Similarity=0.156 Sum_probs=99.4
Q ss_pred ccHHHHHHHHHHHHHcCCeeeeecCCCCCC---HHHHHHHHHHhcCCCCCcEEEEeCCCC---CCCCHHHHHhcC-CccC
Q 027064 52 DSQSYVSMKRKACAEVGIKSFDIDLPEQVS---EAELISKVHELNVMPDVHGILVQLPLP---KHINEEKVLGEI-SLEK 124 (229)
Q Consensus 52 ~s~~Y~~~k~k~a~~~Gi~~~~~~l~~~~~---~~el~~~I~~lN~d~~v~GIlvq~Plp---~~i~~~~i~~~I-~p~K 124 (229)
.|..---+=..++.++|..+..+.- .+.+ .|-+.+.++-|+.- +|+|.+-.|-. .+-..+++.+.. ..-|
T Consensus 52 pSTRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~ 128 (357)
T TIGR03316 52 NSTRTRFSFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYK 128 (357)
T ss_pred CCcchHHHHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhccc
Confidence 4555555677889999999988863 2221 25566666666554 78999987642 222112333331 1122
Q ss_pred c-c--cccCccchhhhhccCCCCCcccCCHHHHHHHHH-HhCC--CCCCCeEEEEcc-------chhhhHHHHHHHhhCC
Q 027064 125 D-V--DGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK-RSGV--TIKGKRAVVVGR-------SNIVGLPVSLLLLKAD 191 (229)
Q Consensus 125 D-V--Dg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~-~~~~--~l~gk~v~ViG~-------s~~VG~pla~~L~~~~ 191 (229)
| | -.+--+|.| ...+.||=+.+=+--++ +.|. .++|++|+++|. ...|.+.++.++..-|
T Consensus 129 ~~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G 201 (357)
T TIGR03316 129 DGVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFG 201 (357)
T ss_pred cccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcC
Confidence 2 0 113345543 13477998888666664 4553 378999999963 4466788888888899
Q ss_pred CEEEEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064 192 ATVTIVHSHT-------------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 192 atVtv~~~~t-------------------------~~l~~~~~~aDivisA~ 218 (229)
++|++|+-.. .++.+.++.||+|.+-+
T Consensus 202 ~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 253 (357)
T TIGR03316 202 MDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPKS 253 (357)
T ss_pred CEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEECC
Confidence 9999996542 24457789999998763
No 179
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.07 E-value=0.018 Score=52.45 Aligned_cols=56 Identities=23% Similarity=0.388 Sum_probs=43.7
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-----------------------CHHhhhccCcEEEEecCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-----------------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~ 220 (229)
+|++|.|||+|. ||..+|.+|..+|. .+.+.+.... +..+.+++|||||.+.|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 678999999977 69999999998877 4676665221 112558899999999998
Q ss_pred CC
Q 027064 221 AM 222 (229)
Q Consensus 221 p~ 222 (229)
|.
T Consensus 84 ~~ 85 (315)
T PRK00066 84 PQ 85 (315)
T ss_pred CC
Confidence 74
No 180
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.04 E-value=0.011 Score=51.34 Aligned_cols=52 Identities=27% Similarity=0.447 Sum_probs=41.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------C---HHh-hhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------D---PES-IVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~---l~~-~~~~aDivisA~g~ 220 (229)
++++|+|.|. ||.++|..|...|.+|++...... + |.+ .+.+||++|.+||.
T Consensus 1 m~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 5799999999 499999999999999998866321 0 222 27888999999985
No 181
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.01 E-value=0.014 Score=55.99 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=45.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH----------------HhhhccCcEEEEecCCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP----------------ESIVREADIVIAAAGQAM 222 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l----------------~~~~~~aDivisA~g~p~ 222 (229)
+.|++|+|+|.|.. |..++.+|.++|++|++++.....+ .+.++.+|+||.+.|.|.
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRP 82 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCC
Confidence 36899999999997 9999999999999999998642111 133567899999999774
No 182
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.98 E-value=0.015 Score=52.51 Aligned_cols=53 Identities=28% Similarity=0.417 Sum_probs=44.9
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~~~~aDivisA~g~p 221 (229)
.+|..||-|.+ |.|+|..|.++|..|++.+++-. +..+..+.||+||+..+.+
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~ 68 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDD 68 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCH
Confidence 37899999997 99999999999999999988622 3447899999999997754
No 183
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.96 E-value=0.012 Score=55.37 Aligned_cols=53 Identities=26% Similarity=0.364 Sum_probs=43.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHTT------------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p 221 (229)
++|+|||+|. ||+++|..|++++ ..|++..+.-. .+.+++++.|+||++.+-+
T Consensus 2 ~~ilviGaG~-Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIGAGG-VGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CcEEEECCch-hHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 6899999988 5999999999988 78999866411 2447788999999997643
No 184
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.96 E-value=0.011 Score=49.46 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=26.8
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+|.|||+|.+ |+.+|.+++..|+.|++++..
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SS
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECC
Confidence 6899999996 999999999999999999764
No 185
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.91 E-value=0.0056 Score=56.13 Aligned_cols=62 Identities=29% Similarity=0.366 Sum_probs=49.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC---------------------CCHHhhhccCcEEEEecC-----
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT---------------------TDPESIVREADIVIAAAG----- 219 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t---------------------~~l~~~~~~aDivisA~g----- 219 (229)
..-+|+|||.|. ||.-.|++....||+||+.+..- .++++.+++||+||.|+=
T Consensus 167 ~~~kv~iiGGGv-vgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgak 245 (371)
T COG0686 167 LPAKVVVLGGGV-VGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAK 245 (371)
T ss_pred CCccEEEECCcc-ccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCC
Confidence 447899999988 59999999999999999986541 146688999999999964
Q ss_pred CCCCCCCCC
Q 027064 220 QAMMVTMGI 228 (229)
Q Consensus 220 ~p~~i~~~~ 228 (229)
.|.+++.+|
T Consensus 246 aPkLvt~e~ 254 (371)
T COG0686 246 APKLVTREM 254 (371)
T ss_pred CceehhHHH
Confidence 455666554
No 186
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.013 Score=49.00 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=33.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||.++|.|+++.+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~ 40 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRG 40 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCC
Confidence 3679999999999999999999999999999888764
No 187
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.89 E-value=0.023 Score=50.57 Aligned_cols=53 Identities=19% Similarity=0.370 Sum_probs=44.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p 221 (229)
++|.|||.|.+ |.+++..|.+.|..|+++++.. .+..+.++++|+||.+++.+
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~ 69 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNS 69 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCH
Confidence 57999999996 9999999999999999887642 24567788999999998743
No 188
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.016 Score=49.61 Aligned_cols=37 Identities=24% Similarity=0.403 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999999887553
No 189
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=95.87 E-value=0.022 Score=52.56 Aligned_cols=56 Identities=25% Similarity=0.445 Sum_probs=45.3
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g 219 (229)
+.+++||+|.|+|.|.+ |+.+|..|..-|+ .+..|++++ +..+.+.+||+||++..
T Consensus 157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~-~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~p 226 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGC-VILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCP 226 (336)
T ss_pred cccccCCEEEEecCcHH-HHHHHHhhhhccc-eeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecC
Confidence 45789999999999997 9999999999884 444555432 56688999999998854
No 190
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.86 E-value=0.019 Score=48.79 Aligned_cols=36 Identities=39% Similarity=0.563 Sum_probs=32.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++||+++|.|.|..+|+.++..|+++|++|.++.+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 578999999999999999999999999999887654
No 191
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.86 E-value=0.019 Score=54.85 Aligned_cols=57 Identities=16% Similarity=0.244 Sum_probs=44.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH-----------------hhhccCcEEEEecCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE-----------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~-----------------~~~~~aDivisA~g~p 221 (229)
.+++|+|+|+|.|.. |++++.+|.++|+.|+++++...... +.+..+|.||...|.|
T Consensus 12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence 468999999999997 99999999999999999986421111 1234578888877765
No 192
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.85 E-value=0.004 Score=51.36 Aligned_cols=63 Identities=22% Similarity=0.288 Sum_probs=43.0
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------------------------CH
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------------------------DP 204 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------------------------~l 204 (229)
+...+|+|+|.|. ||+.++.+|...|+.|++.+.... .+
T Consensus 18 ~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 18 VPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp E-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 4568999999999 599999999999999999855210 23
Q ss_pred HhhhccCcEEEEec-----CCCCCCCCCC
Q 027064 205 ESIVREADIVIAAA-----GQAMMVTMGI 228 (229)
Q Consensus 205 ~~~~~~aDivisA~-----g~p~~i~~~~ 228 (229)
.+.++.+|+||.+. ..|.+|+.+|
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~ 125 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEM 125 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHH
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHH
Confidence 46788999999753 4667776654
No 193
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.022 Score=48.79 Aligned_cols=37 Identities=32% Similarity=0.431 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|++.-+|+.++..|.++|++|.++.+.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999998887653
No 194
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.82 E-value=0.029 Score=47.21 Aligned_cols=58 Identities=26% Similarity=0.307 Sum_probs=45.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------CH----Hh---hhccCcEEEEecCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------DP----ES---IVREADIVIAAAGQA 221 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------~l----~~---~~~~aDivisA~g~p 221 (229)
++.||+++|.|++.-+|+.++..|.++|++|+++.+... |+ .+ .....|++|...|..
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~ 78 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL 78 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence 468999999999999999999999999999988866421 22 11 133569999998853
No 195
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.013 Score=50.19 Aligned_cols=37 Identities=16% Similarity=0.309 Sum_probs=33.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4789999999999999999999999999999988653
No 196
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.77 E-value=0.018 Score=54.42 Aligned_cols=53 Identities=23% Similarity=0.294 Sum_probs=42.8
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhh---------------hccCcEEEEe
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESI---------------VREADIVIAA 217 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~---------------~~~aDivisA 217 (229)
++|.|||.|.+ |.|+|..|+++|.+|+.+++... ++.+. ...||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999995 99999999999999999976432 12222 2379999999
Q ss_pred cCCC
Q 027064 218 AGQA 221 (229)
Q Consensus 218 ~g~p 221 (229)
++.|
T Consensus 83 vptp 86 (415)
T PRK11064 83 VPTP 86 (415)
T ss_pred cCCC
Confidence 9987
No 197
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.77 E-value=0.02 Score=53.72 Aligned_cols=53 Identities=30% Similarity=0.491 Sum_probs=43.6
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------------------------CHHhhhccCcEE
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------------------------DPESIVREADIV 214 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------------------------~l~~~~~~aDiv 214 (229)
+|.|||.|.+ |.|+|..|.+.|.+|+++++... +..+.++++|+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999995 99999999999999999866321 223457789999
Q ss_pred EEecCCCC
Q 027064 215 IAAAGQAM 222 (229)
Q Consensus 215 isA~g~p~ 222 (229)
|.+++.|.
T Consensus 81 ii~vpt~~ 88 (411)
T TIGR03026 81 IICVPTPL 88 (411)
T ss_pred EEEeCCCC
Confidence 99999874
No 198
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.76 E-value=0.027 Score=51.62 Aligned_cols=51 Identities=22% Similarity=0.180 Sum_probs=42.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC----------------------------------CCCHHhhhccCcE
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH----------------------------------TTDPESIVREADI 213 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~----------------------------------t~~l~~~~~~aDi 213 (229)
++|.|||.|.+ |.++|..|+..|..|++.+.. +.++++.+..||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 78999999996 999999999999999988652 1245567889999
Q ss_pred EEEecC
Q 027064 214 VIAAAG 219 (229)
Q Consensus 214 visA~g 219 (229)
||-++.
T Consensus 87 ViEavp 92 (321)
T PRK07066 87 IQESAP 92 (321)
T ss_pred EEECCc
Confidence 998865
No 199
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.75 E-value=0.012 Score=50.34 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|.+.-+|+.++..|+++|++|.++++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4789999999999999999999999999999987664
No 200
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.74 E-value=0.013 Score=50.13 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=34.6
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
..++||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC
Confidence 45789999999999999999999999999999988664
No 201
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.73 E-value=0.035 Score=50.59 Aligned_cols=57 Identities=23% Similarity=0.459 Sum_probs=44.6
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCCC--------------------------CCHHhhhccCcEEEEe
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSHT--------------------------TDPESIVREADIVIAA 217 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~t--------------------------~~l~~~~~~aDivisA 217 (229)
++.++|+|||+|. ||..++.+|...| +++.+++... .+. +.++.||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEEC
Confidence 4578999999977 6999999999888 6777775421 133 368999999999
Q ss_pred cCCCCC
Q 027064 218 AGQAMM 223 (229)
Q Consensus 218 ~g~p~~ 223 (229)
.|.|..
T Consensus 81 ag~~~~ 86 (319)
T PTZ00117 81 AGVQRK 86 (319)
T ss_pred CCCCCC
Confidence 988754
No 202
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=95.72 E-value=0.028 Score=53.90 Aligned_cols=53 Identities=26% Similarity=0.272 Sum_probs=45.0
Q ss_pred ccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEE-EEcCC
Q 027064 147 LPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVT-IVHSH 200 (229)
Q Consensus 147 ~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVt-v~~~~ 200 (229)
-+.|.+|++..++ +.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ ++++.
T Consensus 213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence 3579888876655 457889999999999999 59999999999999876 88775
No 203
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.70 E-value=0.11 Score=51.66 Aligned_cols=121 Identities=19% Similarity=0.305 Sum_probs=69.6
Q ss_pred HHHHHHHHHcC-CeeeeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCcc----------Ccc
Q 027064 58 SMKRKACAEVG-IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE----------KDV 126 (229)
Q Consensus 58 ~~k~k~a~~~G-i~~~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~----------KDV 126 (229)
......|-.+| ..+-...=|.+.+-.++++.|.+=|-+....=|.-..|||. +...|=|. ...
T Consensus 204 ~~ea~rC~~C~~~~~C~~~CP~~~~i~~~~~~~~~g~~~~a~~~~~~~np~p~------~~grvCp~~~~Ce~~C~~~~~ 277 (639)
T PRK12809 204 TYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPE------ICGRVCPQDRLCEGACTLKDH 277 (639)
T ss_pred HHHHHHHhCCCCCCcccccCCCCCcHHHHHHHHHCCCHHHHHHHHHHhCCcch------hhcccCCCCCChHHhccCCCc
Confidence 34556666666 43444455666666666666655444444444455567772 33334331 122
Q ss_pred cccCccchhhhhccCCCCCcccCCHHHHHHHHHHhC-------CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 127 DGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSG-------VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 127 Dg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~-------~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
| .|++.+.|- +.+.+.....+ ....||+|+|||+|.. |...|..|.++|+.|+++.+
T Consensus 278 ~--~~v~i~~l~-------------r~~~d~~~~~~~~~~~~~~~~~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~ 341 (639)
T PRK12809 278 S--GAVSIGNLE-------------RYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPA-GLGCADILARAGVQVDVFDR 341 (639)
T ss_pred C--CCcChhHHH-------------HHHHHHHHHhCCCCCCCcccCCCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeC
Confidence 2 144444432 11111111111 1236999999999997 99999999999999999965
Q ss_pred C
Q 027064 200 H 200 (229)
Q Consensus 200 ~ 200 (229)
.
T Consensus 342 ~ 342 (639)
T PRK12809 342 H 342 (639)
T ss_pred C
Confidence 4
No 204
>PLN02712 arogenate dehydrogenase
Probab=95.70 E-value=0.027 Score=56.42 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=45.7
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhhc-cCcEEEEecC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIVR-EADIVIAAAG 219 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~~-~aDivisA~g 219 (229)
+.++++++|.|||.|.+ |..++..|.+.|.+|+++++... ++.+.+. .+|+||.|+.
T Consensus 364 ~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP 434 (667)
T PLN02712 364 VNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTS 434 (667)
T ss_pred cCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCC
Confidence 45678899999999995 99999999999999998876532 2334454 4899999987
No 205
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.022 Score=49.58 Aligned_cols=58 Identities=21% Similarity=0.270 Sum_probs=44.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C---------------------CHHhhhccCcEEEEecCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T---------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~---------------------~l~~~~~~aDivisA~g~p 221 (229)
.++||.++|.|+|.-+|+.++..|+++|++|+++.+.. . ++.+...+-|++|..+|..
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 36899999999999899999999999999998775432 1 1123345679999988863
No 206
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.69 E-value=0.025 Score=50.97 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=28.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|+++|..|+++++.
T Consensus 3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCC
Confidence 47999998885 999999999999999999764
No 207
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.68 E-value=0.028 Score=52.75 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=32.3
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++||+++|+|.|. .|+.+|..|+++|++|++++..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~ 37 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGK 37 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCC
Confidence 5799999999999 6999999999999999999764
No 208
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.65 E-value=0.016 Score=49.66 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=34.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|+|.-+|+.++..|+++|++|.++.+.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 4789999999999999999999999999999988764
No 209
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.62 E-value=0.017 Score=48.94 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=33.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT 201 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t 201 (229)
+++||+++|+|++.-+|+.++..|+++|++|++..+..
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36789999999999999999999999999999887653
No 210
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.60 E-value=0.02 Score=51.14 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=29.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|+..|..|++++..
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~ 36 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSD 36 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999996 999999999999999998753
No 211
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.59 E-value=0.025 Score=48.21 Aligned_cols=36 Identities=25% Similarity=0.512 Sum_probs=31.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
.+++++|+|||.|++ |..++..|...|. ++++++..
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecCC
Confidence 468899999999995 9999999999998 78888654
No 212
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.58 E-value=0.022 Score=50.79 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=29.0
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|++.|..|++++..
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999996 999999999999999998653
No 213
>PLN02688 pyrroline-5-carboxylate reductase
Probab=95.56 E-value=0.027 Score=49.20 Aligned_cols=53 Identities=15% Similarity=0.340 Sum_probs=41.8
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC----EEEEE-cCCC--------------CCHHhhhccCcEEEEecCCCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA----TVTIV-HSHT--------------TDPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a----tVtv~-~~~t--------------~~l~~~~~~aDivisA~g~p~~ 223 (229)
+|.+||.|.+ |.+++..|.+.|. +|+++ ++.. .+..+.++++|+||.++ .|..
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~ 73 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQV 73 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHH
Confidence 6899999996 9999999999887 88888 5532 13445678899999999 4543
No 214
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=95.54 E-value=0.04 Score=53.70 Aligned_cols=106 Identities=20% Similarity=0.218 Sum_probs=65.3
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHH
Q 027064 76 LPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCL 155 (229)
Q Consensus 76 l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~ 155 (229)
=|.+++..+++..|.+=|-.....=|.-..|||. +...+=|. .+-...+.+.. -.|++-.++-
T Consensus 53 CP~~~~i~~~~~~~~~g~~~~a~~~~~~~np~~~------~~grvc~~---~ce~~C~r~~~--------~~~v~i~~l~ 115 (564)
T PRK12771 53 CPAGEDIRGWLALVRGGDYEYAWRRLTKDNPFPA------VMGRVCYH---PCESGCNRGQV--------DDAVGINAVE 115 (564)
T ss_pred CCCCCcHHHHHHHHHCCCHHHHHHHHHHhCCcch------HhhCcCCc---hhHHhccCCCC--------CCCcCHHHHH
Confidence 3556666677776665554444444555567873 44444443 23333333211 1255556544
Q ss_pred HHHHHh----C------CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 156 ELLKRS----G------VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 156 ~lL~~~----~------~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+..-.+ + ..-.|++|+|||+|.+ |..+|..|..+|++|+++.+
T Consensus 116 r~~~~~~~~~~~~~~~~~~~~g~~V~VIGaGpa-GL~aA~~l~~~G~~V~v~e~ 168 (564)
T PRK12771 116 RFLGDYAIANGWKFPAPAPDTGKRVAVIGGGPA-GLSAAYHLRRMGHAVTIFEA 168 (564)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEec
Confidence 432111 1 1346999999999996 99999999999999999974
No 215
>PLN02256 arogenate dehydrogenase
Probab=95.54 E-value=0.051 Score=49.34 Aligned_cols=56 Identities=20% Similarity=0.297 Sum_probs=43.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-------------CHHhhh-ccCcEEEEecCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-------------DPESIV-READIVIAAAGQ 220 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-------------~l~~~~-~~aDivisA~g~ 220 (229)
+-+++++.|||.|.+ |..++..|.+.|.+|+++++... +..+.+ ..+|+||.|++.
T Consensus 33 ~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~ 102 (304)
T PLN02256 33 KSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSI 102 (304)
T ss_pred cCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCH
Confidence 457889999999986 99999999999988888765431 233344 368999999873
No 216
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.54 E-value=0.023 Score=48.32 Aligned_cols=36 Identities=25% Similarity=0.340 Sum_probs=32.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||+++|.|++.-+|+.++..|.++|++|+++.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r 37 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR 37 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 478999999999988999999999999999887755
No 217
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.52 E-value=0.021 Score=50.73 Aligned_cols=51 Identities=27% Similarity=0.268 Sum_probs=41.0
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------HHhhhccCcEEEEecCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------PESIVREADIVIAAAGQ 220 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------l~~~~~~aDivisA~g~ 220 (229)
+|.|||.|.+ |..++..|.++|..|+.+++.... ..+.+++||+||.|++.
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCH
Confidence 6899999995 999999999999999999764211 11357889999999873
No 218
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.51 E-value=0.027 Score=49.45 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=30.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.+++++|+|+|.|++ |.+++.+|...|. ++++++.
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD~ 56 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLDF 56 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence 467899999999995 9999999999987 6888754
No 219
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.46 E-value=0.033 Score=52.65 Aligned_cols=60 Identities=25% Similarity=0.388 Sum_probs=46.6
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------------------------HHhhhccCcEEEEe
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------------------------PESIVREADIVIAA 217 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------------------------l~~~~~~aDivisA 217 (229)
..+++||+++|.|+|.-+|+.++..|.++|++|+++.++... +.+.+.+.|++|..
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 346789999999999999999999999999999988654321 11234567999987
Q ss_pred cCCC
Q 027064 218 AGQA 221 (229)
Q Consensus 218 ~g~p 221 (229)
.|..
T Consensus 253 AGi~ 256 (406)
T PRK07424 253 HGIN 256 (406)
T ss_pred CCcC
Confidence 7753
No 220
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.034 Score=49.42 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=34.5
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
...+.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 456789999999998889999999999999999988654
No 221
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.022 Score=49.12 Aligned_cols=38 Identities=39% Similarity=0.566 Sum_probs=34.3
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++||.++|.|+|.-+|+.++..|+++|++|+++.+.
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 35789999999999999999999999999999988664
No 222
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.42 E-value=0.04 Score=52.25 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=44.6
Q ss_pred CCCCeEEEEccchhhhHH-HHHHHhhCCCEEEEEcCCCCC----HH------------hhhccCcEEEEecCCCC
Q 027064 165 IKGKRAVVVGRSNIVGLP-VSLLLLKADATVTIVHSHTTD----PE------------SIVREADIVIAAAGQAM 222 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~p-la~~L~~~~atVtv~~~~t~~----l~------------~~~~~aDivisA~g~p~ 222 (229)
.++|++.|+|.|.. |.. +|.+|.++|++|++++.+... +. +.+..+|.||..-|.|.
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeCCCCHHHCCCCCEEEECCCCCC
Confidence 46899999999997 999 799999999999999875321 11 12346898988888764
No 223
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.41 E-value=0.031 Score=47.95 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=32.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+.||.++|.|++.-+|+.++..|.++|++|.++.++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999999999999998876443
No 224
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.021 Score=48.89 Aligned_cols=37 Identities=38% Similarity=0.581 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 4789999999998889999999999999999988664
No 225
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.38 E-value=0.042 Score=49.36 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=42.9
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC----------------CCHHhhhccCcEEEEecCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT----------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t----------------~~l~~~~~~aDivisA~g~p 221 (229)
.++|+|||.|.+ |..++..|.+.|. .|+++++.. .+..+.+.++|+||.|++.+
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~ 77 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVG 77 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHH
Confidence 368999999985 9999999998885 788886631 24456678999999999753
No 226
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.022 Score=48.31 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|.+..+|+.++..|+++|++|+++.++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 3689999999999999999999999999998887554
No 227
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.37 E-value=0.023 Score=49.02 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999999989999999999999999988654
No 228
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.37 E-value=0.036 Score=51.12 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
-.+++++|+|||.|. +|.+++.+|...|. .+++++..
T Consensus 20 ~~L~~~~VlIiG~Gg-lGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 20 RKIREKHVLIVGAGA-LGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred HhhcCCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCC
Confidence 357889999999999 59999999999998 78888653
No 229
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.37 E-value=0.047 Score=47.02 Aligned_cols=37 Identities=32% Similarity=0.442 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999887553
No 230
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.022 Score=48.90 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=33.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.++||.++|.|.+.-+|+.++..|+++|++|+++.+
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r 39 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADL 39 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 468999999999999999999999999999988865
No 231
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.36 E-value=0.039 Score=47.61 Aligned_cols=57 Identities=25% Similarity=0.281 Sum_probs=42.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------C-------C-------HHhhh-ccCcEEEEec
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------T-------D-------PESIV-READIVIAAA 218 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------~-------~-------l~~~~-~~aDivisA~ 218 (229)
...+++++|+|+++.+|+.++..|+++|++|+.+.+.. . | +.+.+ ...|+||.++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 35689999999988899999999999999987653310 0 1 12334 5789999988
Q ss_pred CC
Q 027064 219 GQ 220 (229)
Q Consensus 219 g~ 220 (229)
|.
T Consensus 94 g~ 95 (251)
T PLN00141 94 GF 95 (251)
T ss_pred CC
Confidence 75
No 232
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.35 E-value=0.042 Score=52.51 Aligned_cols=56 Identities=14% Similarity=0.196 Sum_probs=43.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-C------HH------------hhhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-D------PE------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-~------l~------------~~~~~aDivisA~g~p 221 (229)
++||+|+|+|.|.. |++++.+|.++|+.|++.+.+.. + +. +.+...|.||..-|.|
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~vV~SpgI~ 80 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALADAALLVETEASAQRLAAFDVVVKSPGIS 80 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhhcCEEEeCCCChHHccCCCEEEECCCCC
Confidence 46999999999997 99999999999999999886431 1 11 2244678888877766
No 233
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.33 E-value=0.032 Score=47.94 Aligned_cols=37 Identities=30% Similarity=0.409 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.||+|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999887553
No 234
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.025 Score=48.34 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++|+++|.|++..+|+.++..|+++|++|+++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999999999999999999999888653
No 235
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.02 Score=49.78 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999888999999999999999988653
No 236
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.021 Score=48.99 Aligned_cols=37 Identities=32% Similarity=0.419 Sum_probs=33.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|.+..+|..++..|.++|++|+++.+.
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4789999999999999999999999999999988764
No 237
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.32 E-value=0.048 Score=49.34 Aligned_cols=35 Identities=31% Similarity=0.351 Sum_probs=31.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||+|+|.|+++.+|..++..|+++|+.|+.+.+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r 36 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSL 36 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeC
Confidence 46899999999999999999999999999988754
No 238
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=95.32 E-value=0.048 Score=48.70 Aligned_cols=52 Identities=21% Similarity=0.384 Sum_probs=41.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEecC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~g 219 (229)
.+|.|||.|.+ |.+++..|++.|..|+++++.. .+..+.++.+|+||.++.
T Consensus 2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 37999999995 9999999999999999986631 133345678999999887
Q ss_pred C
Q 027064 220 Q 220 (229)
Q Consensus 220 ~ 220 (229)
.
T Consensus 81 ~ 81 (325)
T PRK00094 81 S 81 (325)
T ss_pred H
Confidence 5
No 239
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.31 E-value=0.03 Score=47.58 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=43.3
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC-----------------------CHHhhhccCcEEEEecCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT-----------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~-----------------------~l~~~~~~aDivisA~g~p 221 (229)
|+|+|+++.+|++++..|+..+.+|+.+.|... .+.+.++.+|.||.+++..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 689999888999999999999999999877531 2446688999999999864
No 240
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.30 E-value=0.046 Score=48.69 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.0
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|+..|.+|++.++.
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCC
Confidence 68999999996 999999999999999998653
No 241
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.024 Score=48.66 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||+++|+|++.-+|+.++..|.++|++|+++.+.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDID 40 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 3689999999999999999999999999999888654
No 242
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.028 Score=48.62 Aligned_cols=37 Identities=35% Similarity=0.527 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998889999999999999999988664
No 243
>PRK06182 short chain dehydrogenase; Validated
Probab=95.28 E-value=0.043 Score=47.63 Aligned_cols=35 Identities=26% Similarity=0.171 Sum_probs=31.4
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.++|.|.+.-+|+.++..|+++|++|+.+.+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999998889999999999999999987653
No 244
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.021 Score=48.69 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=32.2
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||+++|.|.+.-+|+.++..|+++|++|+++.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r 37 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR 37 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 57899999999999999999999999999988755
No 245
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.28 E-value=0.042 Score=52.97 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=43.0
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------------CCHHhhhccCcE
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------------TDPESIVREADI 213 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------------~~l~~~~~~aDi 213 (229)
++|.|||.|.+ |.++|..|++.|..|++++... .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 58999999996 9999999999999999986531 234466789999
Q ss_pred EEEecCCC
Q 027064 214 VIAAAGQA 221 (229)
Q Consensus 214 visA~g~p 221 (229)
||.++...
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99887643
No 246
>PRK05717 oxidoreductase; Validated
Probab=95.27 E-value=0.032 Score=47.81 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
..+++||.++|.|.+..+|+.++..|+++|++|.++.+
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC
Confidence 35689999999999999999999999999999988743
No 247
>PLN02253 xanthoxin dehydrogenase
Probab=95.24 E-value=0.046 Score=47.51 Aligned_cols=36 Identities=33% Similarity=0.404 Sum_probs=32.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.+.||.++|.|.+.-+|+.++..|+++|++|.++.+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~ 50 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL 50 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 467999999999999999999999999999988754
No 248
>PRK08223 hypothetical protein; Validated
Probab=95.23 E-value=0.044 Score=49.65 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=30.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.|+.++|+|||.|++ |-+++.+|...|. ++++++.
T Consensus 24 kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD~ 59 (287)
T PRK08223 24 RLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIADF 59 (287)
T ss_pred HHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEeC
Confidence 467899999999995 9999999999998 7888754
No 249
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.026 Score=48.23 Aligned_cols=37 Identities=27% Similarity=0.415 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||+++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~ 40 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRD 40 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999999999999999999998888654
No 250
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.033 Score=47.67 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=33.5
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.+++||.++|.|++.-+|+.++..|+++|+.|+++.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r 39 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGR 39 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcC
Confidence 5789999999999999999999999999999887754
No 251
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.19 E-value=0.03 Score=48.37 Aligned_cols=36 Identities=17% Similarity=0.345 Sum_probs=33.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|+|.-+|+.++..|+++|++|+++.+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 578999999999999999999999999999988754
No 252
>PRK12743 oxidoreductase; Provisional
Probab=95.19 E-value=0.06 Score=46.26 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=30.9
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.+|+++|.|++.-+|+.++..|+++|++|.++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999999999999999999999999988754
No 253
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.043 Score=47.36 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=31.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++.++|.|++.-+|+.++..|.++|++|+.+.+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999999999999999887654
No 254
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.18 E-value=0.057 Score=47.88 Aligned_cols=54 Identities=17% Similarity=0.262 Sum_probs=42.1
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCC----CEEEEEcCCCC----------------CHHhhhccCcEEEEecCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSHTT----------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~t~----------------~l~~~~~~aDivisA~g~ 220 (229)
++.++.+||.|.+ |.+++..|.+.| ..|+++++... +..+...+||+||.++.-
T Consensus 2 ~~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p 75 (279)
T PRK07679 2 SIQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKP 75 (279)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCH
Confidence 3568999999996 999999999887 57888876321 233557789999999863
No 255
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.17 E-value=0.039 Score=47.08 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=31.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
.|+.++|+|+|.|.+ |..++..|...|. ++++++..
T Consensus 18 ~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECCC
Confidence 467899999999995 9999999999998 79988654
No 256
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.17 E-value=0.049 Score=49.34 Aligned_cols=54 Identities=24% Similarity=0.390 Sum_probs=43.1
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC----------------------------CCHHhhhccCcEEEEec
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT----------------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t----------------------------~~l~~~~~~aDivisA~ 218 (229)
..+|.|||.|.+ |.+++..|.+.|..|++.++.. .++.+.++.+|+||.++
T Consensus 4 ~m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 358999999996 9999999999999999987631 13445567899999987
Q ss_pred CCC
Q 027064 219 GQA 221 (229)
Q Consensus 219 g~p 221 (229)
...
T Consensus 83 ~~~ 85 (328)
T PRK14618 83 PSK 85 (328)
T ss_pred chH
Confidence 654
No 257
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.14 E-value=0.07 Score=45.83 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=32.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|.+.-+|+.++..|.++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 478999999999999999999999999999887644
No 258
>PRK09186 flagellin modification protein A; Provisional
Probab=95.13 E-value=0.032 Score=47.50 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=31.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||+++|.|++.-+|+.++..|.++|++|+++.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r 36 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADI 36 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec
Confidence 57899999999999999999999999999888754
No 259
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.037 Score=47.22 Aligned_cols=37 Identities=27% Similarity=0.428 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.||+++|.|++.-+|..++..|+++|++|+++.+.
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999887653
No 260
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.12 E-value=0.041 Score=48.36 Aligned_cols=35 Identities=34% Similarity=0.470 Sum_probs=30.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.|+.++|+|||.|++ |-+++.+|...|. ++++++.
T Consensus 29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 468899999999995 9999999999987 7888754
No 261
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=95.11 E-value=0.03 Score=53.86 Aligned_cols=55 Identities=25% Similarity=0.380 Sum_probs=45.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------------CCHHhhhccCcEEEEecC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------------~~l~~~~~~aDivisA~g 219 (229)
.++||+|+|||.|.. |+.-|..|...|.+|++.-+.. .++.+.++.||+|+..++
T Consensus 33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlP 106 (487)
T PRK05225 33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTP 106 (487)
T ss_pred HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCC
Confidence 368999999999996 9999999998999998554331 146688999999999876
No 262
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.10 E-value=0.059 Score=46.15 Aligned_cols=52 Identities=27% Similarity=0.346 Sum_probs=40.0
Q ss_pred eEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCC-------------------------CCHHhhhccCcEEEEecCCC
Q 027064 169 RAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHT-------------------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t-------------------------~~l~~~~~~aDivisA~g~p 221 (229)
++.||| .|. +|..++..|.+.|..|++.++.. .+..+.+..+|+||.|+..+
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~ 79 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWD 79 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHH
Confidence 689998 677 59999999999999998875532 12334577899999998744
No 263
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.08 E-value=0.049 Score=47.36 Aligned_cols=54 Identities=22% Similarity=0.291 Sum_probs=43.2
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC------HHhhhccC--cEEEEecCCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD------PESIVREA--DIVIAAAGQAM 222 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~------l~~~~~~a--DivisA~g~p~ 222 (229)
+|+|+|+++.+|+.++..|+++|..|+.+.+...| +.+.+... |+||...|.+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~ 62 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYTD 62 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcccc
Confidence 58999999999999999999999999988775433 33456655 99999888643
No 264
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.06 E-value=0.032 Score=48.22 Aligned_cols=38 Identities=29% Similarity=0.427 Sum_probs=34.2
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++||+++|.|.+.-+|+.++..|+.+|++|.++.+.
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999999999999998887654
No 265
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.06 E-value=0.05 Score=46.13 Aligned_cols=34 Identities=35% Similarity=0.498 Sum_probs=31.0
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
||+++|.|+++.+|+.++..|+++|++|+++.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999988764
No 266
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.05 E-value=0.055 Score=48.78 Aligned_cols=57 Identities=19% Similarity=0.229 Sum_probs=43.8
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCCC-------------------------CHHhhhccCcEEEEe
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHTT-------------------------DPESIVREADIVIAA 217 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t~-------------------------~l~~~~~~aDivisA 217 (229)
++||+++|.|+++.+|+.++..|+++| +.|+++.+... ++.+.++..|+||..
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 478999999999999999999999886 68887754211 122445678999998
Q ss_pred cCCC
Q 027064 218 AGQA 221 (229)
Q Consensus 218 ~g~p 221 (229)
.|..
T Consensus 82 Ag~~ 85 (324)
T TIGR03589 82 AALK 85 (324)
T ss_pred cccC
Confidence 8754
No 267
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.05 E-value=0.07 Score=48.39 Aligned_cols=53 Identities=21% Similarity=0.337 Sum_probs=41.8
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g~ 220 (229)
++|.|||.|. ||..+|..|+.+|. .|.+++.... +..+ +++||+||.+.|.
T Consensus 2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 4799999988 69999999998875 7888865211 2323 7899999999998
Q ss_pred CC
Q 027064 221 AM 222 (229)
Q Consensus 221 p~ 222 (229)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 75
No 268
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=95.05 E-value=0.11 Score=47.41 Aligned_cols=51 Identities=24% Similarity=0.246 Sum_probs=38.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
++|....++..+...+..-.|.+|+|.|.|. ||..+++++...|++|+++.
T Consensus 164 l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~ 214 (360)
T PLN02586 164 LLCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVIS 214 (360)
T ss_pred hhcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEe
Confidence 4555555566666555434799999999876 69999999999999877653
No 269
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=95.04 E-value=0.055 Score=45.83 Aligned_cols=60 Identities=25% Similarity=0.404 Sum_probs=40.3
Q ss_pred CCCCeEEEEcc----------------chhhhHHHHHHHhhCCCEEEEEcCCCC--------------------CHHhhh
Q 027064 165 IKGKRAVVVGR----------------SNIVGLPVSLLLLKADATVTIVHSHTT--------------------DPESIV 208 (229)
Q Consensus 165 l~gk~v~ViG~----------------s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~l~~~~ 208 (229)
|+||+|+|-+. |+-.|..+|..+..+||.|+..|..+. -+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 46777777653 455699999999999999999988742 122557
Q ss_pred ccCcEEEEecCCCCCC
Q 027064 209 READIVIAAAGQAMMV 224 (229)
Q Consensus 209 ~~aDivisA~g~p~~i 224 (229)
+++|++|.|.-...|-
T Consensus 81 ~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFR 96 (185)
T ss_dssp GGGSEEEE-SB--SEE
T ss_pred CcceeEEEecchhhee
Confidence 7899999998877764
No 270
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.04 E-value=0.056 Score=48.93 Aligned_cols=54 Identities=24% Similarity=0.378 Sum_probs=42.1
Q ss_pred eEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCCC-------CHH----------------hhhccCcEEEEecCCCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHTT-------DPE----------------SIVREADIVIAAAGQAMM 223 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t~-------~l~----------------~~~~~aDivisA~g~p~~ 223 (229)
+|.|||.|. ||.+++..|+.+| ..|.++++... ++. +.++.||+||.++|.|.-
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~~~ 80 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGANQK 80 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCCCC
Confidence 699999987 6999999999998 36888876431 111 447899999999998753
No 271
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.04 Score=46.76 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|++.-+|+.++..|+++|++|++..+.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998889999999999999999988764
No 272
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.02 E-value=0.046 Score=48.95 Aligned_cols=52 Identities=13% Similarity=0.179 Sum_probs=42.0
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~ 220 (229)
+|+|.|+++.+|+.++..|+++|.+|+...+... ++.+.++.+|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 7999999999999999999999999988755321 134567888999998763
No 273
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.97 E-value=0.074 Score=47.76 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=42.3
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhcc---CcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVRE---ADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~---aDivisA~g~p 221 (229)
++.+||.|.+ |.+++..|.+.|.+|++++++. .+..+..++ +|+||.++..+
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~ 70 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAG 70 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCc
Confidence 6899999996 9999999999999999998742 244455555 69999998865
No 274
>PRK06545 prephenate dehydrogenase; Validated
Probab=94.97 E-value=0.056 Score=49.92 Aligned_cols=53 Identities=25% Similarity=0.344 Sum_probs=41.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC------------------CCHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT------------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t------------------~~l~~~~~~aDivisA~g~p 221 (229)
++|.|||.|.+ |..++..|.+.|..|.+..+.. .++.+.+++||+||.|++..
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~ 71 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVD 71 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHH
Confidence 47999999996 9999999999998777764421 12345578999999998743
No 275
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=94.95 E-value=0.076 Score=48.24 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=33.1
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.-+++|+|+|.|+++.+|..++..|+++|.+|+.+.+
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 4578899999999999999999999999999887754
No 276
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.93 E-value=0.064 Score=50.76 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=44.1
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---HH-----------hhhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---PE-----------SIVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---l~-----------~~~~~aDivisA~g~p 221 (229)
++||+|.|+|-|.. |+++|.+|.++|++|++++..... +. +.+..+|+||-.-|.|
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~ 76 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP 76 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence 57999999999997 999999999999999999864211 11 1245689998777765
No 277
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.92 E-value=0.077 Score=47.24 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=29.9
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
.||+++|.|+++.+|+.++..|+++|+.|+++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~ 36 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATV 36 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 489999999999999999999999999987653
No 278
>PRK09242 tropinone reductase; Provisional
Probab=94.92 E-value=0.033 Score=47.77 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=32.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.++||.++|.|++.-+|+.++..|.++|++|+++.+
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r 41 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVAR 41 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 578999999999988999999999999999988754
No 279
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.033 Score=47.87 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999998889999999999999999988653
No 280
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.91 E-value=0.05 Score=48.76 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=28.8
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|+..|..|++.+..
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECC
Confidence 48999999986 999999999999999998653
No 281
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.034 Score=47.43 Aligned_cols=37 Identities=30% Similarity=0.421 Sum_probs=33.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++++|.|+|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999999888664
No 282
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=94.90 E-value=0.033 Score=47.98 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=32.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++||.++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999999989999999999999999888664
No 283
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.056 Score=46.05 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.1
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+|+++|.|+++-+|+.++..|+++|++|+.+.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r 34 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ 34 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 688999999999999999999999999887755
No 284
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.032 Score=49.46 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|.++|++|.++.+.
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLE 42 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999887653
No 285
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.89 E-value=0.087 Score=48.17 Aligned_cols=55 Identities=20% Similarity=0.358 Sum_probs=43.1
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC--------------------------CCHHhhhccCcEEEEec
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT--------------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t--------------------------~~l~~~~~~aDivisA~ 218 (229)
+.++|+|||+|. ||..++..|+..|. ++.+.+... .+. +.++.||+||.+.
T Consensus 5 ~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~ta 82 (321)
T PTZ00082 5 KRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVTA 82 (321)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEECC
Confidence 447999999988 59999999998884 777765422 133 5689999999999
Q ss_pred CCCC
Q 027064 219 GQAM 222 (229)
Q Consensus 219 g~p~ 222 (229)
|.|.
T Consensus 83 g~~~ 86 (321)
T PTZ00082 83 GLTK 86 (321)
T ss_pred CCCC
Confidence 9875
No 286
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.035 Score=46.87 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|.+..+|+.++..|+++|++|+++.+.
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARN 42 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998889999999999999999888653
No 287
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=94.88 E-value=0.063 Score=48.31 Aligned_cols=54 Identities=24% Similarity=0.268 Sum_probs=43.0
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC------------------CH-HhhhccCcEEEEecCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT------------------DP-ESIVREADIVIAAAGQA 221 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~------------------~l-~~~~~~aDivisA~g~p 221 (229)
-++|+|+|.|.+ |+.++..|..+|..|.++.+.-. +. .+....||+||.|++.+
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~ 75 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIE 75 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHH
Confidence 368999999996 99999999999999988865321 11 45577789999999843
No 288
>PRK06194 hypothetical protein; Provisional
Probab=94.88 E-value=0.041 Score=47.97 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=32.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999999887653
No 289
>PRK08264 short chain dehydrogenase; Validated
Probab=94.87 E-value=0.043 Score=46.31 Aligned_cols=57 Identities=25% Similarity=0.308 Sum_probs=44.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCCC--------------------HHhhh---ccCcEEEEecC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTTD--------------------PESIV---READIVIAAAG 219 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~~--------------------l~~~~---~~aDivisA~g 219 (229)
++.+|+++|.|.+.-+|+.++..|.++|+ +|+++.+.... +.+.+ ...|+||.+.|
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 35789999999999999999999999999 99988764321 11222 24699999998
Q ss_pred C
Q 027064 220 Q 220 (229)
Q Consensus 220 ~ 220 (229)
.
T Consensus 83 ~ 83 (238)
T PRK08264 83 I 83 (238)
T ss_pred c
Confidence 7
No 290
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.042 Score=46.60 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|.+..+|+.++..|+++|++|+++.+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 4789999999999999999999999999999887654
No 291
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=94.86 E-value=0.064 Score=48.20 Aligned_cols=52 Identities=13% Similarity=0.299 Sum_probs=42.6
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-------------CCHHhhhccCcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-------------~~l~~~~~~aDivisA~g~p 221 (229)
+|.+||-|.+ |.+++..|.+.|..|+++++.. .+..+..++||+||.++..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~ 66 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDT 66 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence 5899999996 9999999999999999887632 13446678999999998754
No 292
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.84 E-value=0.048 Score=46.93 Aligned_cols=36 Identities=28% Similarity=0.349 Sum_probs=32.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||+++|.|.+.-+|+.++..|.++|+.|.++.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~ 39 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYR 39 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 478999999999999999999999999999887755
No 293
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.82 E-value=0.051 Score=42.87 Aligned_cols=32 Identities=25% Similarity=0.514 Sum_probs=27.9
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.++|+|+|.|.+ |-.++..|...|. .+++++.
T Consensus 2 ~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 2 NKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp T-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEES
T ss_pred CCEEEEECcCHH-HHHHHHHHHHhCCCceeecCC
Confidence 579999999995 9999999999999 7888865
No 294
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.81 E-value=0.05 Score=47.05 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=30.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.++.++|+|+|.|++ |-.++..|...|. ++++++.
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 467899999999995 9999999999998 6777743
No 295
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.036 Score=48.67 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999999999999999999999887653
No 296
>PRK06223 malate dehydrogenase; Reviewed
Probab=94.79 E-value=0.084 Score=47.34 Aligned_cols=53 Identities=25% Similarity=0.372 Sum_probs=41.8
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCCC--------------------------CHHhhhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHTT--------------------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t~--------------------------~l~~~~~~aDivisA~g~ 220 (229)
++|.|||+|. ||..++..|...|. +|.+.+.... +. +.++.||+||.+.|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999977 59999999998764 8888865221 22 447899999999998
Q ss_pred CC
Q 027064 221 AM 222 (229)
Q Consensus 221 p~ 222 (229)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 75
No 297
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.79 E-value=0.075 Score=46.78 Aligned_cols=54 Identities=26% Similarity=0.393 Sum_probs=41.6
Q ss_pred EEEEccchhhhHHHHHHHhhCC----CEEEEEcCC-------------------------CCCHHhhhccCcEEEEecCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSH-------------------------TTDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~-------------------------t~~l~~~~~~aDivisA~g~ 220 (229)
++|||+|+.+|..++..|+..+ ..+.+.+.. |.|+++.+++||+||.+.|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799995568999999998888 467776542 12446778999999999998
Q ss_pred CCC
Q 027064 221 AMM 223 (229)
Q Consensus 221 p~~ 223 (229)
|..
T Consensus 81 ~~~ 83 (263)
T cd00650 81 GRK 83 (263)
T ss_pred CCC
Confidence 765
No 298
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.79 E-value=0.04 Score=48.82 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=28.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++|.|||.|.+ |.+++..|+..|..|++++.
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence 58999999995 99999999999999999873
No 299
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.78 E-value=0.087 Score=50.53 Aligned_cols=56 Identities=16% Similarity=0.361 Sum_probs=43.4
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C-C---HH---------------hhhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T-D---PE---------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~-~---l~---------------~~~~~aDivisA~g~p 221 (229)
+.+|+|.|+|-|.. |+++|.+|.++|+.|+..++.. . . +. +.+..+|+||...|.|
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~d~vv~sp~I~ 80 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVGGPFDPALLDGVDLVALSPGLS 80 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEeCCCchhHhcCCCEEEECCCCC
Confidence 46899999999997 9999999999999999998642 1 1 21 1234688888877755
No 300
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.76 E-value=0.039 Score=46.60 Aligned_cols=36 Identities=25% Similarity=0.413 Sum_probs=32.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.+|+++|.|++..+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999887654
No 301
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.75 E-value=0.047 Score=45.96 Aligned_cols=37 Identities=35% Similarity=0.464 Sum_probs=32.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE-cCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV-HSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~-~~~ 200 (229)
++.+|+++|+|.+.-+|+.++..|+++|++|++. .+.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~ 39 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDIN 39 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4678999999999889999999999999998887 553
No 302
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.75 E-value=0.1 Score=46.48 Aligned_cols=34 Identities=29% Similarity=0.201 Sum_probs=30.6
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
..||+|+|.|+++.+|..++..|+++|++|+.+.
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~ 36 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATV 36 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 3689999999999999999999999999988653
No 303
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.74 E-value=0.051 Score=46.77 Aligned_cols=36 Identities=28% Similarity=0.354 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|++.-+|+.++..|.++|++|.++.+
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~ 40 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGV 40 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 478999999999999999999999999999988755
No 304
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.73 E-value=0.052 Score=45.46 Aligned_cols=36 Identities=36% Similarity=0.502 Sum_probs=32.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.+|+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999999999999888764
No 305
>PRK08589 short chain dehydrogenase; Validated
Probab=94.73 E-value=0.046 Score=47.65 Aligned_cols=37 Identities=27% Similarity=0.326 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3679999999999989999999999999999988654
No 306
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=94.72 E-value=0.11 Score=45.62 Aligned_cols=49 Identities=29% Similarity=0.478 Sum_probs=36.6
Q ss_pred cCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEc
Q 027064 148 PCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVH 198 (229)
Q Consensus 148 PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~ 198 (229)
+|....++..+++.+. ..|.+|+|+|.|. +|..+++++...|++ |+++.
T Consensus 103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~ 152 (280)
T TIGR03366 103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAAD 152 (280)
T ss_pred hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEC
Confidence 4444444555555543 3799999999976 699999999999997 77764
No 307
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.72 E-value=0.086 Score=47.77 Aligned_cols=60 Identities=22% Similarity=0.173 Sum_probs=46.2
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------C------HHhhhccCcEEEE
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------D------PESIVREADIVIA 216 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------~------l~~~~~~aDivis 216 (229)
.+-++++|+|.|.++.+|+.++..|+++|++|+++.+... | +.+.++..|+||.
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH 85 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 3457899999999999999999999999999987644211 1 2234566899999
Q ss_pred ecCCCC
Q 027064 217 AAGQAM 222 (229)
Q Consensus 217 A~g~p~ 222 (229)
.++.++
T Consensus 86 ~A~~~~ 91 (353)
T PLN02896 86 VAASME 91 (353)
T ss_pred CCcccc
Confidence 988654
No 308
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.042 Score=46.45 Aligned_cols=36 Identities=25% Similarity=0.465 Sum_probs=32.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.++.++|.|.+..+|+.++..|+++|++|+++++.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999999999999988764
No 309
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.68 E-value=0.11 Score=46.04 Aligned_cols=34 Identities=29% Similarity=0.290 Sum_probs=30.3
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.||+|+|.|+++.+|+.++..|+++|.+|+++.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r 36 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVR 36 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4799999999999999999999999999876543
No 310
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.68 E-value=0.098 Score=52.01 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
-.||+|+|||+|.. |...|..|.+.|+.|+++.+
T Consensus 325 ~~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~ 358 (654)
T PRK12769 325 KSDKRVAIIGAGPA-GLACADVLARNGVAVTVYDR 358 (654)
T ss_pred cCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEec
Confidence 36999999999997 99999999999999999965
No 311
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.65 E-value=0.044 Score=47.63 Aligned_cols=38 Identities=32% Similarity=0.506 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998889999999999999999988664
No 312
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.65 E-value=0.046 Score=46.85 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=32.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.+|.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 678999999999999999999999999999887654
No 313
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.64 E-value=0.094 Score=45.09 Aligned_cols=54 Identities=20% Similarity=0.272 Sum_probs=40.2
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCC---CE-EEEEcCCC----------------CCHHhhhccCcEEEEecCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKAD---AT-VTIVHSHT----------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~---at-Vtv~~~~t----------------~~l~~~~~~aDivisA~g~ 220 (229)
+..+|.|||.|.+ |..++..|.+.+ .+ ++++++.. .+..+.+.++|+||.++..
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4578999999996 999999998775 23 66665421 1344667889999999874
No 314
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.042 Score=49.32 Aligned_cols=36 Identities=39% Similarity=0.469 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R 46 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR 46 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 578999999999999999999999999999998765
No 315
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.058 Score=46.81 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=33.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+++|.|++.-+|..++..|+++|++|+++.+.
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999998763
No 316
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.065 Score=45.97 Aligned_cols=37 Identities=24% Similarity=0.388 Sum_probs=34.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|.++|++|.++.+.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999988664
No 317
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.60 E-value=0.1 Score=49.11 Aligned_cols=56 Identities=20% Similarity=0.279 Sum_probs=43.6
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C----CHHh---------------hhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T----DPES---------------IVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~----~l~~---------------~~~~aDivisA~g~p 221 (229)
+.||+++|+|.|.. |..+|.+|.++|+.|++.+... . .+.+ .....|.||...|.|
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKDALDNGFDILALSPGIS 78 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence 56899999999986 9999999999999999987542 1 1111 124689999988876
No 318
>PRK07478 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.048 Score=46.64 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=32.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|.|.-+|+.++..|.++|++|.++.+
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r 38 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR 38 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 367999999999999999999999999999888755
No 319
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=94.58 E-value=0.061 Score=44.29 Aligned_cols=36 Identities=42% Similarity=0.580 Sum_probs=31.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||+|+|||.|.. +--++..|++.|.+|+++.|+
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~ 199 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRS 199 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecC
Confidence 578999999999997 999999999999999999875
No 320
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.57 E-value=0.054 Score=46.18 Aligned_cols=36 Identities=36% Similarity=0.522 Sum_probs=32.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|.+..+|+.++..|+++|++|.++.+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r 39 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADL 39 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence 367999999999999999999999999999887754
No 321
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.56 E-value=0.11 Score=40.28 Aligned_cols=51 Identities=25% Similarity=0.322 Sum_probs=35.1
Q ss_pred eEEEEccchhhhHHHHHHHhhCC-CE-EEEEcCCC---CCHH-------------------hhhccCcEEEEecC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKAD-AT-VTIVHSHT---TDPE-------------------SIVREADIVIAAAG 219 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~-at-Vtv~~~~t---~~l~-------------------~~~~~aDivisA~g 219 (229)
||.|||+++.+|+-+..+|+++- +. +.++-++. +.+. +.+.++|+||.|++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCc
Confidence 68999988889999999999853 34 34443332 1111 33688999999987
No 322
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=94.56 E-value=0.051 Score=49.33 Aligned_cols=59 Identities=31% Similarity=0.471 Sum_probs=44.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEE----------------EcCCCC----------CHHhhhccCcEEEEe
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTI----------------VHSHTT----------DPESIVREADIVIAA 217 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv----------------~~~~t~----------~l~~~~~~aDivisA 217 (229)
.-.+.+|.|+|+++=+|.|++.+|. .+.-|+- .|-.|+ .|++.++.||+||-.
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 3468999999999999999998775 3333332 233332 588999999999999
Q ss_pred cCCCCC
Q 027064 218 AGQAMM 223 (229)
Q Consensus 218 ~g~p~~ 223 (229)
.|.|.-
T Consensus 104 AGVPRK 109 (345)
T KOG1494|consen 104 AGVPRK 109 (345)
T ss_pred CCCCCC
Confidence 997764
No 323
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.56 E-value=0.071 Score=45.89 Aligned_cols=36 Identities=14% Similarity=0.360 Sum_probs=31.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
.++.++|+|||.|++ |-+++..|...|. ++++++..
T Consensus 25 ~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 467899999999995 9999999999998 58888554
No 324
>PRK07814 short chain dehydrogenase; Provisional
Probab=94.55 E-value=0.047 Score=47.19 Aligned_cols=37 Identities=27% Similarity=0.365 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.+.-+|+.++..|+.+|++|.++.+.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999888653
No 325
>PRK06196 oxidoreductase; Provisional
Probab=94.55 E-value=0.048 Score=48.69 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=34.9
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
..++.||.|+|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 456889999999999999999999999999999987654
No 326
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.53 E-value=0.13 Score=43.60 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=30.6
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
+.+++++|.|.+..+|+.++..|+++|+.|++..
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~ 37 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNA 37 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 5689999999999999999999999999987654
No 327
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.052 Score=45.96 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=31.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+.||+++|.|++.-+|+.++..|+++|++|++..+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r 38 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGR 38 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 57899999999999999999999999999887754
No 328
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.045 Score=47.43 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=32.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++|+.++|.|+|.-+|+.++..|.++|++|.++.+
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r 37 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDL 37 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 467999999999999999999999999999988755
No 329
>PLN00198 anthocyanidin reductase; Provisional
Probab=94.50 E-value=0.16 Score=45.67 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=31.5
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
.+.++++|+|.|+++.+|+.++..|+++|++|+++
T Consensus 5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~ 39 (338)
T PLN00198 5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTT 39 (338)
T ss_pred cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEE
Confidence 35679999999999999999999999999998755
No 330
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.49 E-value=0.088 Score=49.07 Aligned_cols=39 Identities=23% Similarity=0.226 Sum_probs=33.8
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.....|++|+|+|+++.+|+.++..|+++|+.|+.+.+.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 345689999999999999999999999999998877553
No 331
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.054 Score=45.78 Aligned_cols=36 Identities=33% Similarity=0.442 Sum_probs=32.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.++||+++|.|++.-+|+.++..|.++|++|.++.+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r 39 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDG 39 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC
Confidence 357899999999888999999999999999887754
No 332
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.47 E-value=0.083 Score=47.79 Aligned_cols=31 Identities=32% Similarity=0.379 Sum_probs=28.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.+|+|||.|.+ |.++|..|.+.|.+|+++.+
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r 33 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGR 33 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEec
Confidence 47999999995 99999999999999999866
No 333
>PRK10423 transcriptional repressor RbsR; Provisional
Probab=94.47 E-value=1.2 Score=39.17 Aligned_cols=89 Identities=17% Similarity=0.264 Sum_probs=58.1
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEEC-CCcccHHHHHHHHHHHHHcCCeeeee
Q 027064 10 TIIDGKA-VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVG-GRKDSQSYVSMKRKACAEVGIKSFDI 74 (229)
Q Consensus 10 ~il~G~~-la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~~~~ 74 (229)
+.|+|+. ++++.++++.+.++++ |..| .+++|.-. +++--..+.+...+.|++.|..+.+.
T Consensus 17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~ 92 (327)
T PRK10423 17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC 92 (327)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 5788775 7777777777766655 4444 45555432 23444556778889999999987765
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCCcEEEEeC
Q 027064 75 DLPEQVSEAELISKVHELNVMPDVHGILVQL 105 (229)
Q Consensus 75 ~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~ 105 (229)
... -+.++..+.++.+... +|+|+++.-
T Consensus 93 ~~~--~~~~~~~~~~~~l~~~-~vdGiI~~~ 120 (327)
T PRK10423 93 NTE--GDEQRMNRNLETLMQK-RVDGLLLLC 120 (327)
T ss_pred eCC--CCHHHHHHHHHHHHHc-CCCEEEEeC
Confidence 433 2344445666666543 699999963
No 334
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.44 E-value=0.11 Score=49.52 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=42.1
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHH----------------hhhccCcEEEEecCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPE----------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~----------------~~~~~aDivisA~g~p 221 (229)
.||+|+|+|.|.. |+.++.+|. +|+.|++.+.+..... +.+.++|.||..-|.|
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vV~SPgI~ 74 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNAIAALSDSRWQNLDKIVLSPGIP 74 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCceeccCChhHhhCCCEEEECCCCC
Confidence 5899999999997 999999999 5999999986532211 2244689888887766
No 335
>PRK12742 oxidoreductase; Provisional
Probab=94.44 E-value=0.075 Score=44.70 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=31.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
++.||+++|.|++.-+|+.++..|+++|++|.++.
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~ 37 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTY 37 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEec
Confidence 36799999999988899999999999999987653
No 336
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.43 E-value=0.076 Score=44.52 Aligned_cols=37 Identities=30% Similarity=0.371 Sum_probs=32.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++|+++|.|.++-+|+.++..|+++|++|+++-++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999998776443
No 337
>PLN02427 UDP-apiose/xylose synthase
Probab=94.43 E-value=0.11 Score=47.74 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=45.4
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCCCC----------------------------CHHhhhccCc
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSHTT----------------------------DPESIVREAD 212 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~t~----------------------------~l~~~~~~aD 212 (229)
+.+++.++|+|.|+++.+|+.++..|+++ |..|..+.+... .+.+.++.+|
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 45567789999999999999999999998 588887764211 1234566789
Q ss_pred EEEEecCCC
Q 027064 213 IVIAAAGQA 221 (229)
Q Consensus 213 ivisA~g~p 221 (229)
+||...+.+
T Consensus 89 ~ViHlAa~~ 97 (386)
T PLN02427 89 LTINLAAIC 97 (386)
T ss_pred EEEEccccc
Confidence 999887743
No 338
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.41 E-value=0.054 Score=45.76 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=32.2
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|++++|.|.+.-+|..++..|.++|++|+++.+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999998888999999999999998887653
No 339
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.40 E-value=0.053 Score=45.63 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.||+++|.|.+.-+|..++..|.++|++|+...+.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999999999999999999999999887653
No 340
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=94.40 E-value=0.19 Score=46.54 Aligned_cols=78 Identities=24% Similarity=0.315 Sum_probs=54.5
Q ss_pred cccCCHHHHHHHHHHhC------CCCCCCeEEEEccchhhhHHHHHHHhhCC-CEEEEEcCC-C----------------
Q 027064 146 FLPCTPKGCLELLKRSG------VTIKGKRAVVVGRSNIVGLPVSLLLLKAD-ATVTIVHSH-T---------------- 201 (229)
Q Consensus 146 ~~PcTa~av~~lL~~~~------~~l~gk~v~ViG~s~~VG~pla~~L~~~~-atVtv~~~~-t---------------- 201 (229)
-+|+++.-.++-|-+.. ---.|+.|+|.|+|.-||..+.+++...| +.|+.+-|. +
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~ 210 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYK 210 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCC
Confidence 34665555555555554 34479999999999999999999999999 555444332 2
Q ss_pred -CCHHhhhcc-----CcEEEEecCCCCC
Q 027064 202 -TDPESIVRE-----ADIVIAAAGQAMM 223 (229)
Q Consensus 202 -~~l~~~~~~-----aDivisA~g~p~~ 223 (229)
.+..+.++. -|+|+.++|.+.+
T Consensus 211 ~~~~~e~~kk~~~~~~DvVlD~vg~~~~ 238 (347)
T KOG1198|consen 211 DENVVELIKKYTGKGVDVVLDCVGGSTL 238 (347)
T ss_pred CHHHHHHHHhhcCCCccEEEECCCCCcc
Confidence 133344555 7999999998754
No 341
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.37 E-value=0.07 Score=45.72 Aligned_cols=37 Identities=30% Similarity=0.359 Sum_probs=33.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||.++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999999999999999999999999988653
No 342
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.37 E-value=0.059 Score=48.05 Aligned_cols=39 Identities=38% Similarity=0.472 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT 201 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t 201 (229)
..+.||.++|-|+|.-+|+.+|.+|.+.||+|++|.++.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~ 42 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSE 42 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 358999999999999999999999999999999997754
No 343
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.078 Score=44.73 Aligned_cols=36 Identities=25% Similarity=0.305 Sum_probs=32.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.+.||+++|.|.+.-+|+.++..|.++|++|+++.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~ 37 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA 37 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 467999999999999999999999999999887654
No 344
>PRK08818 prephenate dehydrogenase; Provisional
Probab=94.34 E-value=0.14 Score=48.00 Aligned_cols=56 Identities=20% Similarity=0.229 Sum_probs=44.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhC-CCEEEEEcCC---CCCHHhhhccCcEEEEecCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKA-DATVTIVHSH---TTDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~-~atVtv~~~~---t~~l~~~~~~aDivisA~g~p 221 (229)
.-.+|+|||-++.+|..++..|.++ +.+|+.+++. +.+..+.+++||+||.|++..
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~ 62 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIR 62 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHH
Confidence 3468999999444699999999975 7789888653 345677899999999999843
No 345
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=94.33 E-value=0.097 Score=54.50 Aligned_cols=35 Identities=26% Similarity=0.245 Sum_probs=32.1
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
-.||+|+|||+|.. |...|..|.++|..||+..+.
T Consensus 304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~ 338 (944)
T PRK12779 304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF 338 (944)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence 36999999999998 999999999999999999663
No 346
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.082 Score=44.54 Aligned_cols=36 Identities=19% Similarity=0.395 Sum_probs=31.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++.+|+++|.|++..+|+.++..|.++|++|++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 357899999999999999999999999999887543
No 347
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.31 E-value=0.099 Score=48.19 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=43.8
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------C------HHhhhccCcEEEEecCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------D------PESIVREADIVIAAAGQA 221 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~------l~~~~~~aDivisA~g~p 221 (229)
++|+|+|.|.++.||+.++..|.++|..|+.+.+... | +...++.+|+||...+..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~ 96 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADM 96 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccccc
Confidence 6799999999999999999999999999988764211 1 123356789999988644
No 348
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.31 E-value=0.068 Score=49.72 Aligned_cols=36 Identities=28% Similarity=0.500 Sum_probs=31.5
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
.+++++|+|+|.|++ |.+++..|...|. ++++++..
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 467899999999995 9999999999998 78888664
No 349
>PRK09135 pteridine reductase; Provisional
Probab=94.30 E-value=0.077 Score=44.69 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=32.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
..+++++|.|++..+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999999988654
No 350
>PRK06139 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.049 Score=49.65 Aligned_cols=37 Identities=16% Similarity=0.305 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.+|.++|.|+|.-+|+.++..|.++|++|.++.+.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~ 40 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARD 40 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4679999999999889999999999999999988653
No 351
>PRK08643 acetoin reductase; Validated
Probab=94.25 E-value=0.062 Score=45.93 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=31.1
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
||.++|.|.+.-+|+.++..|+++|++|.++.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999887653
No 352
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.06 Score=46.63 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=32.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++++|+++|.|.+.-+|+.++..|.++|++|+++.+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r 39 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR 39 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Confidence 468999999999888999999999999999988755
No 353
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=94.22 E-value=0.071 Score=51.74 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=29.4
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|+..|..|++.++.
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 68999999996 999999999999999998764
No 354
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.22 E-value=0.081 Score=44.78 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=31.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||+++|.|++..+|+.++..|+++|++|.+..+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r 35 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL 35 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC
Confidence 46899999999999999999999999999987754
No 355
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.21 E-value=0.088 Score=48.75 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
-.+++++|+|||.|++ |-+++..|...|. ++++++.
T Consensus 24 ~~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD~ 60 (355)
T PRK05597 24 QSLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIIDD 60 (355)
T ss_pred HHHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 3467899999999995 9999999999988 7888755
No 356
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.20 E-value=0.085 Score=49.24 Aligned_cols=36 Identities=25% Similarity=0.483 Sum_probs=31.6
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
-.+++++|+|||.|++ |.+++..|...|. ++++++.
T Consensus 37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD~ 73 (370)
T PRK05600 37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLIDD 73 (370)
T ss_pred HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence 3578899999999995 9999999999997 8888855
No 357
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.20 E-value=0.14 Score=46.72 Aligned_cols=55 Identities=22% Similarity=0.375 Sum_probs=40.8
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC------------------------CHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT------------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~------------------------~l~~~~~~aDivisA~g~p 221 (229)
.+|.|||+|. ||..+|..|..+|. .+.+++.... .-.+.++.|||||.+.|.|
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~~ 82 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGAR 82 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCCC
Confidence 5899999977 69999999988776 4666654221 1124589999999999986
Q ss_pred CC
Q 027064 222 MM 223 (229)
Q Consensus 222 ~~ 223 (229)
.-
T Consensus 83 ~k 84 (312)
T cd05293 83 QN 84 (312)
T ss_pred CC
Confidence 53
No 358
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.084 Score=45.28 Aligned_cols=36 Identities=17% Similarity=0.361 Sum_probs=32.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 578999999999999999999999999999888654
No 359
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=94.17 E-value=0.075 Score=51.58 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=29.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.|||.|.+ |.++|..|+..|..|++.++.
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~ 39 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDAR 39 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 78999999986 999999999999999998763
No 360
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.17 E-value=0.12 Score=47.08 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=39.9
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------------------------CHHhhhccCcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------------------------~l~~~~~~aDivisA~g~p 221 (229)
+|.|||+|. ||.++|.+|+.++. .+.+.+.... +-.+.++.|||||.+.|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 589999988 69999999987765 4555543210 1236699999999999986
Q ss_pred CC
Q 027064 222 MM 223 (229)
Q Consensus 222 ~~ 223 (229)
.-
T Consensus 80 ~k 81 (307)
T cd05290 80 ID 81 (307)
T ss_pred CC
Confidence 43
No 361
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.16 E-value=0.11 Score=44.50 Aligned_cols=54 Identities=26% Similarity=0.282 Sum_probs=42.8
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC-C------------C------HHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT-T------------D------PESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t-~------------~------l~~~~~~aDivisA~g~p 221 (229)
+++.|||+|+-+|.-++.-+..||..||-.-+.. + | +.+.+..-|+||+|.|.+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4789999999999999999999999988764421 1 1 224567779999998865
No 362
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=94.15 E-value=0.14 Score=46.37 Aligned_cols=132 Identities=17% Similarity=0.186 Sum_probs=83.3
Q ss_pred CCcEEEEeCCCCC-CC------CHHHHHhcCCcc----CcccccCccch--hhhhccC----------CCCCcccCCHHH
Q 027064 97 DVHGILVQLPLPK-HI------NEEKVLGEISLE----KDVDGFHPLNI--GKLAMKG----------RDPLFLPCTPKG 153 (229)
Q Consensus 97 ~v~GIlvq~Plp~-~i------~~~~i~~~I~p~----KDVDg~~~~N~--g~l~~~~----------~~~~~~PcTa~a 153 (229)
-+.|+++..||-+ .+ -.++++++..-. -||-|+..... |++-.+. .-..+-.-|+++
T Consensus 70 vieg~l~~~pllpe~~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFssIVgn~~~n~q~~~~e~t~~~~ttgns~Taya 149 (351)
T COG5322 70 VIEGYLVESPLLPEMLRSRPKAATRRVLNAMALAQKLGADVTGLGGFSSIVGNLGQNVQVRNVELTFTRFTTGNSHTAYA 149 (351)
T ss_pred EEEEEEEccccCHHHHhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhhhhccccccccccceEEEEEecccCCccchHH
Confidence 3788999998742 11 234555555442 36666654331 1111110 001222346665
Q ss_pred HHH----HHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhh
Q 027064 154 CLE----LLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIV 208 (229)
Q Consensus 154 v~~----lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~ 208 (229)
+.+ -.++.|++++...|.|+|+-+.+|-.++..|..+++...+.++.+. .-.+++
T Consensus 150 a~r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~ 229 (351)
T COG5322 150 ACRQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALP 229 (351)
T ss_pred HHHHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccc
Confidence 443 3445699999999999999999999999999999998888886431 112556
Q ss_pred ccCcEEEEecCCCCC-CCCCC
Q 027064 209 READIVIAAAGQAMM-VTMGI 228 (229)
Q Consensus 209 ~~aDivisA~g~p~~-i~~~~ 228 (229)
..+|+|.+|+-.++. |.+.+
T Consensus 230 ~e~i~v~vAs~~~g~~I~pq~ 250 (351)
T COG5322 230 QEDILVWVASMPKGVEIFPQH 250 (351)
T ss_pred ccceEEEEeecCCCceechhh
Confidence 677888888877766 44443
No 363
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.11 E-value=0.089 Score=44.61 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+.+|+++|.|++.-+|+.++..|+++|++|.++.+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 57899999999999999999999999999887643
No 364
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.11 E-value=0.085 Score=47.12 Aligned_cols=39 Identities=31% Similarity=0.331 Sum_probs=34.9
Q ss_pred CCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 162 GVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 162 ~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
..+++||.++|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 357899999999999999999999999999999887653
No 365
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.09 E-value=0.086 Score=46.03 Aligned_cols=37 Identities=24% Similarity=0.444 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.||+++|.|++.-+|+.++..|.++|++|.++.+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 3679999999999999999999999999999887653
No 366
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.08 E-value=0.15 Score=46.77 Aligned_cols=55 Identities=16% Similarity=0.379 Sum_probs=40.6
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCCC--------------------------CCHHhhhccCcEEE
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSHT--------------------------TDPESIVREADIVI 215 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~t--------------------------~~l~~~~~~aDivi 215 (229)
+|+|+|+++.||..++..|...+. .+.+.+... .+..+.++.||+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 799999966689999999987553 255554322 12346789999999
Q ss_pred EecCCCCC
Q 027064 216 AAAGQAMM 223 (229)
Q Consensus 216 sA~g~p~~ 223 (229)
.+.|.|.-
T Consensus 82 itAG~~~~ 89 (323)
T cd00704 82 LVGAFPRK 89 (323)
T ss_pred EeCCCCCC
Confidence 99998753
No 367
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.068 Score=45.68 Aligned_cols=37 Identities=22% Similarity=0.362 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~ 200 (229)
.+++|+++|.|++.-+|+.++..|.++|+. |+++.+.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~ 40 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRN 40 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCC
Confidence 368999999999999999999999999998 8888664
No 368
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.07 E-value=0.15 Score=47.84 Aligned_cols=54 Identities=22% Similarity=0.285 Sum_probs=42.3
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH--------------HhhhccCcEEEEecCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP--------------ESIVREADIVIAAAGQA 221 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l--------------~~~~~~aDivisA~g~p 221 (229)
.++|+|||-|.+ |..+|.+|.++|++|+.++.....+ ......+|++|...|.+
T Consensus 3 ~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~ 70 (418)
T PRK00683 3 LQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIK 70 (418)
T ss_pred CCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCC
Confidence 478999999997 9999999999999999987643211 11235689999888866
No 369
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.13 Score=44.74 Aligned_cols=35 Identities=17% Similarity=0.072 Sum_probs=31.4
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.||.++|.|++.-+|+.++..|.++|+.|+++.+.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999999999999999999999999887653
No 370
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.06 E-value=0.11 Score=37.10 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=29.3
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT 201 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t 201 (229)
+++|||.|.+ |--+|..|.+.|..|+++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 6899999995 9999999999999999998864
No 371
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.06 E-value=0.14 Score=48.72 Aligned_cols=51 Identities=20% Similarity=0.287 Sum_probs=40.7
Q ss_pred eEEEEc-cchhhhHHHHHHHhhCCCEEEEEcCCCC---------------CHHhhhccCcEEEEecCC
Q 027064 169 RAVVVG-RSNIVGLPVSLLLLKADATVTIVHSHTT---------------DPESIVREADIVIAAAGQ 220 (229)
Q Consensus 169 ~v~ViG-~s~~VG~pla~~L~~~~atVtv~~~~t~---------------~l~~~~~~aDivisA~g~ 220 (229)
++.||| .|. +|..++..|.+.|..|+++.+... +..+.+.+||+||.|++.
T Consensus 2 kI~IIGG~G~-mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~ 68 (437)
T PRK08655 2 KISIIGGTGG-LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPI 68 (437)
T ss_pred EEEEEecCCH-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCH
Confidence 689998 466 599999999999999998876421 344567889999999874
No 372
>PLN02778 3,5-epimerase/4-reductase
Probab=94.06 E-value=0.18 Score=45.04 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=42.4
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---HHhhhc--cCcEEEEecCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---PESIVR--EADIVIAAAGQAM 222 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---l~~~~~--~aDivisA~g~p~ 222 (229)
.++|+|.|+++.+|..++..|.++|.+|+.....-.+ +...++ +.|+||.++|..+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~ 69 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTG 69 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 5899999999999999999999999998765433222 222333 5799998887543
No 373
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.094 Score=44.10 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=31.9
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+.|+.++|+|+++-+|+.++..|+++|++|+++.+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITAR 38 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC
Confidence 46899999999999999999999999999998865
No 374
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=94.04 E-value=0.12 Score=45.58 Aligned_cols=54 Identities=22% Similarity=0.302 Sum_probs=42.1
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC---------------------CHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT---------------------DPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~---------------------~l~~~~~~aDivisA~g~p 221 (229)
++++|.|.++.+|+.++..|.++|++|+.+.+... ++.+.++..|+||...+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 47999999999999999999999999988765421 1234566789999887643
No 375
>PLN02214 cinnamoyl-CoA reductase
Probab=94.03 E-value=0.16 Score=46.20 Aligned_cols=35 Identities=23% Similarity=0.205 Sum_probs=31.2
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++|+|+|.|+++.+|+.++..|+++|+.|+.+.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 42 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR 42 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57899999999999999999999999999877644
No 376
>PRK07806 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.099 Score=44.35 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=32.2
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.||+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999998889999999999999999887553
No 377
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.1 Score=43.75 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=32.0
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.||+++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999888664
No 378
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.96 E-value=0.13 Score=44.16 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=30.4
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999988664
No 379
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.95 E-value=0.13 Score=43.00 Aligned_cols=52 Identities=23% Similarity=0.399 Sum_probs=40.1
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC----------------------HHhhhccC--cEEEEecCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD----------------------PESIVREA--DIVIAAAGQA 221 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~----------------------l~~~~~~a--DivisA~g~p 221 (229)
|+|+|+++.||..++..|+++|.+|+...+.+.. +.+.++.. |.||-+.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 7899999999999999999999998766554321 22445555 8888888765
No 380
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.91 E-value=0.093 Score=45.27 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||.++|.|+| .-+|+.++..|+++|++|+++.+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r 41 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ 41 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC
Confidence 689999999997 34699999999999999998854
No 381
>PRK09620 hypothetical protein; Provisional
Probab=93.89 E-value=0.19 Score=43.84 Aligned_cols=60 Identities=28% Similarity=0.398 Sum_probs=45.1
Q ss_pred CCCCeEEEEccc----------------hhhhHHHHHHHhhCCCEEEEEcCCCC-------------------CH----H
Q 027064 165 IKGKRAVVVGRS----------------NIVGLPVSLLLLKADATVTIVHSHTT-------------------DP----E 205 (229)
Q Consensus 165 l~gk~v~ViG~s----------------~~VG~pla~~L~~~~atVtv~~~~t~-------------------~l----~ 205 (229)
++||+|+|-+.+ +.+|..+|..|..+|++|++++..+. ++ .
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~ 80 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK 80 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence 478999998664 77899999999999999998875321 11 1
Q ss_pred hhh--ccCcEEEEecCCCCCC
Q 027064 206 SIV--READIVIAAAGQAMMV 224 (229)
Q Consensus 206 ~~~--~~aDivisA~g~p~~i 224 (229)
+.+ ..+|+||-+...+.|-
T Consensus 81 ~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 81 SIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHhcccCCCEEEECcccccee
Confidence 224 2579999999888774
No 382
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=93.88 E-value=0.36 Score=44.11 Aligned_cols=155 Identities=22% Similarity=0.225 Sum_probs=101.8
Q ss_pred CeEEEEEECCCcccHHHHHHHHHHHHHcCCeeeeecCC-----CCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHH
Q 027064 40 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLP-----EQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEE 114 (229)
Q Consensus 40 P~LaiI~vg~~~~s~~Y~~~k~k~a~~~Gi~~~~~~l~-----~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp~~i~~~ 114 (229)
..||.|. . ..|..---+=.-++..+|-...++.=. ..-+-+|--..+.++ +|||.+--. +|-+.+
T Consensus 45 k~laliF-e--K~STRTR~SFeva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr~-----~D~I~~R~~--~~~~ve 114 (310)
T COG0078 45 KNLALIF-E--KTSTRTRVSFEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSRM-----VDAIMIRGF--SHETLE 114 (310)
T ss_pred ceEEEEe-c--CCCchhhhhHHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHhh-----hheEEEecc--cHHHHH
Confidence 3455555 3 234444444556788899988776422 122234444455444 899998654 444333
Q ss_pred HHHhcCCccCcccccCccchhhhhccCCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEE
Q 027064 115 KVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATV 194 (229)
Q Consensus 115 ~i~~~I~p~KDVDg~~~~N~g~l~~~~~~~~~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atV 194 (229)
++.++ -.|. +++| ....+.||-..|=+--++++...++|++++=+|-++.|+..+...-...|..|
T Consensus 115 ~lA~~----s~VP---------ViNg-LtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 115 ELAKY----SGVP---------VING-LTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HHHHh----CCCc---------eEcc-cccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 33331 1111 1222 23457799999988878777767999999999999999999988888889999
Q ss_pred EEEcCCC-------------------------CCHHhhhccCcEEEEec
Q 027064 195 TIVHSHT-------------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 195 tv~~~~t-------------------------~~l~~~~~~aDivisA~ 218 (229)
+++.-+. .|..+..+.||+|.+-+
T Consensus 181 ~ia~Pk~~~p~~~~~~~a~~~a~~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 181 RIATPKGYEPDPEVVEKAKENAKESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred EEECCCcCCcCHHHHHHHHHHHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence 9884432 26667899999998764
No 383
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.88 E-value=0.085 Score=45.19 Aligned_cols=36 Identities=22% Similarity=0.419 Sum_probs=32.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.+.||.|+|.|.+.-+|+.++..|.++|++|.++.+
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r 43 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI 43 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 367999999999999999999999999999877654
No 384
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.86 E-value=0.11 Score=45.97 Aligned_cols=38 Identities=32% Similarity=0.459 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++||+++|.|++.-+|..++..|+++|++|+++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999999999999999888554
No 385
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.86 E-value=0.12 Score=44.78 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.++|.|++ .-+|+.++..|.++|++|+++.+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 4789999999985 33599999999999999998754
No 386
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=93.84 E-value=0.2 Score=47.84 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=31.3
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
-.|++|+|||+|.+ |...|..|.++|+.|++..+.
T Consensus 139 ~~~~~V~IIG~Gpa-Gl~aA~~l~~~G~~V~i~e~~ 173 (467)
T TIGR01318 139 PTGKRVAVIGAGPA-GLACADILARAGVQVVVFDRH 173 (467)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHcCCeEEEEecC
Confidence 36899999999997 999999999999999998653
No 387
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.84 E-value=0.093 Score=44.18 Aligned_cols=36 Identities=28% Similarity=0.423 Sum_probs=31.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++++|+++|.|++..+|+.++..|.++|+.|++..+
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~ 38 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT 38 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 467999999999999999999999999998877644
No 388
>PRK05993 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.083 Score=46.14 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=31.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.||.++|.|++.-+|+.++..|.++|++|+++.+.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 37899999998889999999999999999988664
No 389
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=93.81 E-value=0.15 Score=44.15 Aligned_cols=54 Identities=24% Similarity=0.378 Sum_probs=42.6
Q ss_pred EEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----------------CHHhhhccCcEEEEecCCCCC
Q 027064 170 AVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----------------DPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 170 v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----------------~l~~~~~~aDivisA~g~p~~ 223 (229)
|+|.|+++.+|..++..|+++|++|+...+.-. ...+.+...|+||..+|.+..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcc
Confidence 589999999999999999999999998876422 112346678999999987653
No 390
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=93.81 E-value=0.19 Score=45.11 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=41.5
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhcc---CcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVRE---ADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~---aDivisA~g~p 221 (229)
+|.+||.|.+ |.+++..|++.|..|+++++.. .+..+.... +|+||+++..+
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~ 70 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAG 70 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCC
Confidence 6899999996 9999999999999999998742 134444554 69999988765
No 391
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.80 E-value=0.091 Score=45.58 Aligned_cols=34 Identities=32% Similarity=0.274 Sum_probs=30.7
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.||.++|.|++..+|+.++..|+++|+.|+++.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r 35 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMR 35 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC
Confidence 5789999999999999999999999999887744
No 392
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.80 E-value=0.11 Score=45.02 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=31.9
Q ss_pred CCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++||.++|.|+| .-+|+.++..|+++|++|.++.+.
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999987 235999999999999999887553
No 393
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.80 E-value=0.19 Score=39.37 Aligned_cols=50 Identities=30% Similarity=0.420 Sum_probs=37.4
Q ss_pred eEEEEccchhhhHHHHHHHhh-CCCE-EEEEcCCC----------------------CCHHhhhccCcEEEEec
Q 027064 169 RAVVVGRSNIVGLPVSLLLLK-ADAT-VTIVHSHT----------------------TDPESIVREADIVIAAA 218 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~-~~at-Vtv~~~~t----------------------~~l~~~~~~aDivisA~ 218 (229)
+|.|+|.++-+|+.++.++.+ .+.+ |-.+.+.. .++++.+..+|++|..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence 789999944469999999998 6766 44444443 46788899999999987
No 394
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=93.80 E-value=2.3 Score=37.52 Aligned_cols=93 Identities=14% Similarity=0.187 Sum_probs=56.8
Q ss_pred hhcccHH----HHHHHHHHHHHHHHHHHh---------cCCCCCeEEEEEEC-CCcccHHHHHHHHHHHHHcCCeeeeec
Q 027064 10 TIIDGKA----VAQTIRSEIAEEVRLLSE---------KYGKVPGLAVVIVG-GRKDSQSYVSMKRKACAEVGIKSFDID 75 (229)
Q Consensus 10 ~il~G~~----la~~i~~~i~~~~~~l~~---------~~~~~P~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~~~~~ 75 (229)
++|+|+. ++++.++++.+.+++|.= +.+....++++.-. +++--....+...+.|++.|..+.+..
T Consensus 19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~ 98 (328)
T PRK11303 19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC 98 (328)
T ss_pred HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 6789985 888888888887776620 00123345555422 223333345678888999999987764
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCcEEEEeC
Q 027064 76 LPEQVSEAELISKVHELNVMPDVHGILVQL 105 (229)
Q Consensus 76 l~~~~~~~el~~~I~~lN~d~~v~GIlvq~ 105 (229)
... +.+...+.++.+... +++||++.-
T Consensus 99 ~~~--~~~~~~~~~~~l~~~-~vdgiIi~~ 125 (328)
T PRK11303 99 SDD--QPDNEMRCAEHLLQR-QVDALIVST 125 (328)
T ss_pred CCC--CHHHHHHHHHHHHHc-CCCEEEEcC
Confidence 332 233334555555433 699999953
No 395
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=93.78 E-value=0.14 Score=46.86 Aligned_cols=51 Identities=25% Similarity=0.159 Sum_probs=37.6
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
+|++..-++.+|..+.---.|.+|+|.|+++-||..+.+++...|+++.+.
T Consensus 123 l~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~ 173 (326)
T COG0604 123 LPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAV 173 (326)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEE
Confidence 466666666666664322239999999988889999999999999654443
No 396
>PRK08507 prephenate dehydrogenase; Validated
Probab=93.78 E-value=0.18 Score=44.48 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=38.7
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC---------------CCHHhhhccCcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT---------------TDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t---------------~~l~~~~~~aDivisA~g~p 221 (229)
+|.|||.|.+ |.+++..|.+.|. +|+.+++.. .+..+ +.++|+||.|++..
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~-~~~aD~Vilavp~~ 69 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEE-LKKCDVIFLAIPVD 69 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHH-HhcCCEEEEeCcHH
Confidence 6899999985 9999999998885 688776531 13334 34599999998743
No 397
>PRK07677 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.084 Score=45.17 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=31.0
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
||.++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999999999999999999999888653
No 398
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.77 E-value=0.17 Score=44.58 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=27.1
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++|||.|.+ |..++..|.+.|..|+++.+
T Consensus 2 ~I~IiG~G~~-G~~~a~~L~~~g~~V~~~~r 31 (304)
T PRK06522 2 KIAILGAGAI-GGLFGAALAQAGHDVTLVAR 31 (304)
T ss_pred EEEEECCCHH-HHHHHHHHHhCCCeEEEEEC
Confidence 6899999985 99999999999999998865
No 399
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=93.77 E-value=0.33 Score=42.81 Aligned_cols=52 Identities=19% Similarity=0.037 Sum_probs=39.0
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
+|+.+..++..|.+...--.|.+|+|.|+++.||..+..++...|++|+.+.
T Consensus 124 ~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~ 175 (329)
T cd08294 124 LGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCA 175 (329)
T ss_pred cccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe
Confidence 3555555666664444334799999999877789999999999999877654
No 400
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.76 E-value=0.16 Score=45.91 Aligned_cols=57 Identities=28% Similarity=0.410 Sum_probs=41.8
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC--CC-------------------CHHh--hhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH--TT-------------------DPES--IVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~--t~-------------------~l~~--~~~~aDivisA~g~p 221 (229)
..|.+|+|+|.|. ||..+++++...|+.|+++.+. +. +..+ ....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4799999999876 6999999999999998877652 11 1100 123479999999976
Q ss_pred C
Q 027064 222 M 222 (229)
Q Consensus 222 ~ 222 (229)
.
T Consensus 250 ~ 250 (355)
T cd08230 250 P 250 (355)
T ss_pred H
Confidence 4
No 401
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=93.75 E-value=0.17 Score=45.92 Aligned_cols=55 Identities=33% Similarity=0.442 Sum_probs=41.9
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC--C--------------------------CHHhhhccCcEEEEe
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT--T--------------------------DPESIVREADIVIAA 217 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t--~--------------------------~l~~~~~~aDivisA 217 (229)
.+|.|+|+++.||..++..|+..|. .|+.+++.. . + .+.++.||+||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999955579999999998876 377765421 0 1 2448999999999
Q ss_pred cCCCCC
Q 027064 218 AGQAMM 223 (229)
Q Consensus 218 ~g~p~~ 223 (229)
.|.|.-
T Consensus 80 ag~p~~ 85 (309)
T cd05294 80 AGVPRK 85 (309)
T ss_pred cCCCCC
Confidence 998864
No 402
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=93.75 E-value=0.13 Score=50.77 Aligned_cols=35 Identities=26% Similarity=0.128 Sum_probs=31.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
..||.++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R 112 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 47899999999988999999999999999987654
No 403
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=93.74 E-value=0.12 Score=48.59 Aligned_cols=51 Identities=25% Similarity=0.393 Sum_probs=39.9
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------------------------CHHhhhccCcEEEE
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------------------------DPESIVREADIVIA 216 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------------------------~l~~~~~~aDivis 216 (229)
+|.|||.|-+ |.|+|.+|. .|.+|+.++.... +..+..+.||+||.
T Consensus 2 kI~VIGlGyv-Gl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGYV-GLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCHH-HHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 6899999995 999998777 4899999975211 12344678999999
Q ss_pred ecCCC
Q 027064 217 AAGQA 221 (229)
Q Consensus 217 A~g~p 221 (229)
+++-|
T Consensus 80 ~Vpt~ 84 (388)
T PRK15057 80 ATPTD 84 (388)
T ss_pred eCCCC
Confidence 99987
No 404
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=93.74 E-value=0.13 Score=47.63 Aligned_cols=51 Identities=22% Similarity=0.309 Sum_probs=40.7
Q ss_pred eEEEEccchhhhHHHHHHHhhCC--------CEEEEEcCC---------------------------------CCCHHhh
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKAD--------ATVTIVHSH---------------------------------TTDPESI 207 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~--------atVtv~~~~---------------------------------t~~l~~~ 207 (229)
+|+|||+|.. |..+|..|.+.| .+|++..+. |.|+.+.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999995 999999999888 778876430 1256678
Q ss_pred hccCcEEEEecCC
Q 027064 208 VREADIVIAAAGQ 220 (229)
Q Consensus 208 ~~~aDivisA~g~ 220 (229)
++.||+||.|++.
T Consensus 80 l~~ADiIIlAVPs 92 (342)
T TIGR03376 80 AKGADILVFVIPH 92 (342)
T ss_pred HhcCCEEEEECCh
Confidence 8999999999874
No 405
>PRK06197 short chain dehydrogenase; Provisional
Probab=93.73 E-value=0.097 Score=46.40 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+++||.|+|.|++.-+|+.++..|+++|++|+++.+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r 48 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR 48 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence 468999999999988999999999999999887754
No 406
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.69 E-value=0.12 Score=44.41 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=30.1
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
.++||+++|.|.+.-+|+.++..|+++|++|.++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i 38 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAI 38 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEE
Confidence 4679999999999999999999999999985554
No 407
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.67 E-value=0.11 Score=48.62 Aligned_cols=35 Identities=34% Similarity=0.531 Sum_probs=30.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.|+.++|+|||.|++ |-+++..|...|. ++++++.
T Consensus 39 ~L~~~~VlviG~GGl-Gs~va~~La~~Gvg~i~lvD~ 74 (392)
T PRK07878 39 RLKNARVLVIGAGGL-GSPTLLYLAAAGVGTLGIVEF 74 (392)
T ss_pred HHhcCCEEEECCCHH-HHHHHHHHHHcCCCeEEEECC
Confidence 357899999999995 9999999999988 7888854
No 408
>PLN02602 lactate dehydrogenase
Probab=93.65 E-value=0.2 Score=46.44 Aligned_cols=54 Identities=26% Similarity=0.470 Sum_probs=40.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCCC-------C-----------------HHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHTT-------D-----------------PESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t~-------~-----------------l~~~~~~aDivisA~g~p 221 (229)
++|.|||+|. ||..+|..|+.++. .+.+++.... | -.+.+++|||||.+.|.|
T Consensus 38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~~ 116 (350)
T PLN02602 38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGAR 116 (350)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCCC
Confidence 7999999988 69999999988775 4666654211 0 124489999999999987
Q ss_pred C
Q 027064 222 M 222 (229)
Q Consensus 222 ~ 222 (229)
.
T Consensus 117 ~ 117 (350)
T PLN02602 117 Q 117 (350)
T ss_pred C
Confidence 4
No 409
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=93.63 E-value=0.15 Score=45.19 Aligned_cols=30 Identities=33% Similarity=0.377 Sum_probs=27.2
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+|+|+|.|.+ |..++..|.+.|..|+++.+
T Consensus 2 kI~IiG~G~i-G~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 2 RIAVVGAGAV-GGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred eEEEECCCHH-HHHHHHHHHHCCCceEEEec
Confidence 6899999995 99999999999999998766
No 410
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=93.61 E-value=0.16 Score=46.09 Aligned_cols=61 Identities=20% Similarity=0.169 Sum_probs=31.8
Q ss_pred CeEEEEccchhhhHHHHHHHhh-CCC-EEEEEcCCC--------------------CCHHhhhccCcEEEEecCCCC---
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLK-ADA-TVTIVHSHT--------------------TDPESIVREADIVIAAAGQAM--- 222 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~-~~a-tVtv~~~~t--------------------~~l~~~~~~aDivisA~g~p~--- 222 (229)
+++.|||.|.- ++.-+..|.. ++. +|.+.+++. .+.++.++.|||||+||+...
T Consensus 129 ~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 129 RTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp -EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred ceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 56666666664 5554444433 333 455554421 146788999999999999888
Q ss_pred CCCCCCC
Q 027064 223 MVTMGIL 229 (229)
Q Consensus 223 ~i~~~~v 229 (229)
+++.+|+
T Consensus 208 ~~~~~~l 214 (313)
T PF02423_consen 208 VFDAEWL 214 (313)
T ss_dssp SB-GGGS
T ss_pred cccHHHc
Confidence 4687775
No 411
>PRK07411 hypothetical protein; Validated
Probab=93.59 E-value=0.12 Score=48.39 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=30.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
.|+.++|+|||.|++ |-+++.+|...|. ++++++.
T Consensus 35 ~L~~~~VlivG~GGl-G~~va~~La~~Gvg~l~lvD~ 70 (390)
T PRK07411 35 RLKAASVLCIGTGGL-GSPLLLYLAAAGIGRIGIVDF 70 (390)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCEEEEECC
Confidence 467899999999995 9999999999998 7888855
No 412
>PRK07680 late competence protein ComER; Validated
Probab=93.56 E-value=0.19 Score=44.37 Aligned_cols=50 Identities=18% Similarity=0.345 Sum_probs=39.6
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC----EEEEEcCCC----------------CCHHhhhccCcEEEEecC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA----TVTIVHSHT----------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a----tVtv~~~~t----------------~~l~~~~~~aDivisA~g 219 (229)
++.|||.|.+ |..++..|.+.|. +|+++++.. .+..+.+.++|+||.++.
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~ 71 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK 71 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC
Confidence 5899999996 9999999998873 788887742 134456788999999983
No 413
>PRK08267 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.087 Score=45.21 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=29.7
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
|+++|.|++.-+|+.++..|+++|++|.++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r 33 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI 33 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 78999999999999999999999999998865
No 414
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=93.53 E-value=0.14 Score=45.59 Aligned_cols=52 Identities=21% Similarity=0.325 Sum_probs=37.0
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCH------Hhhhc--cCcEEEEecCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDP------ESIVR--EADIVIAAAGQ 220 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l------~~~~~--~aDivisA~g~ 220 (229)
+++|+|+++.+|..+...|..+|..|..+.+..-|+ .+.+. +.|+||.+.+-
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEecccee
Confidence 799999999999999999999998888886654332 23443 36999999864
No 415
>PRK05086 malate dehydrogenase; Provisional
Probab=93.52 E-value=0.23 Score=45.17 Aligned_cols=56 Identities=25% Similarity=0.411 Sum_probs=39.3
Q ss_pred CeEEEEccchhhhHHHHHHHhh-C--CCEEEEEcC--------------C---------CCCHHhhhccCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLK-A--DATVTIVHS--------------H---------TTDPESIVREADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~-~--~atVtv~~~--------------~---------t~~l~~~~~~aDivisA~g~p 221 (229)
++++|||+++.||..++..|.. . +..+++..+ . +.++.+.++.+|+||.+.|.|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 5899999966679999988843 2 224555432 1 124456788899999999987
Q ss_pred CC
Q 027064 222 MM 223 (229)
Q Consensus 222 ~~ 223 (229)
+-
T Consensus 81 ~~ 82 (312)
T PRK05086 81 RK 82 (312)
T ss_pred CC
Confidence 64
No 416
>PRK07109 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.089 Score=47.82 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++++|.++|.|+|.-+|+.++..|.++|++|+++.+.
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4678999999999999999999999999999988663
No 417
>PRK07985 oxidoreductase; Provisional
Probab=93.52 E-value=0.12 Score=45.83 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=32.7
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 478999999999999999999999999999988643
No 418
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=93.51 E-value=0.26 Score=45.01 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=43.8
Q ss_pred CCCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCCC--------------------CCHHhhhccCcEEEEecCCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSHT--------------------TDPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~t--------------------~~l~~~~~~aDivisA~g~p~~ 223 (229)
.-+++.|||.|.. |+..+..|.. ...+|.++++.. .+..+.+++|||||+||+....
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 3588999999996 8875555443 334788876532 2455778999999999987665
Q ss_pred -CCCCCC
Q 027064 224 -VTMGIL 229 (229)
Q Consensus 224 -i~~~~v 229 (229)
+..+|+
T Consensus 206 ~~~~~~l 212 (325)
T TIGR02371 206 VVKADWV 212 (325)
T ss_pred EecHHHc
Confidence 355553
No 419
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=93.51 E-value=0.19 Score=48.21 Aligned_cols=57 Identities=30% Similarity=0.466 Sum_probs=45.0
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----H----H-----------hhhccCcEEEEecCCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----P----E-----------SIVREADIVIAAAGQAM 222 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----l----~-----------~~~~~aDivisA~g~p~ 222 (229)
+.||+|+|+|-|.. |+.++..|.++|+.|++++.+... . . +....+|+||..=|.|.
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~ 81 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPP 81 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCccchhccccCCEEEECCCCCC
Confidence 34899999999998 999999999999999999865322 0 0 23567899988777654
No 420
>PRK06128 oxidoreductase; Provisional
Probab=93.46 E-value=0.12 Score=45.76 Aligned_cols=35 Identities=14% Similarity=0.429 Sum_probs=31.9
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
.++||+++|.|.+.-+|+.++..|+++|++|+++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~ 86 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNY 86 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEe
Confidence 37899999999999999999999999999988764
No 421
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.45 E-value=0.12 Score=43.93 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||+++|.|.+.-+|..++..|+++|++|+++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 3689999999999999999999999999999887653
No 422
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=93.44 E-value=0.1 Score=49.69 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+++||+|+|||+|.. |--++-.|...|++||+.-|.
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs 207 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS 207 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence 4789999999999998 999999999999999998664
No 423
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=93.42 E-value=0.13 Score=46.12 Aligned_cols=52 Identities=10% Similarity=0.101 Sum_probs=40.7
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHH---hhhccCcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPE---SIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~---~~~~~aDivisA~g~p 221 (229)
+|.|||.|.+ |.+++..|.+.|.+|++.+++.. +.. +.+..+|+||.++...
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch
Confidence 6899999996 99999999999999999877421 222 2345689999988754
No 424
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.40 E-value=0.14 Score=43.45 Aligned_cols=37 Identities=27% Similarity=0.365 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++.+|+++|.|.+.-+|+.++..|.++|+.|+++.+.
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 4789999999999989999999999999999887653
No 425
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.40 E-value=0.13 Score=46.23 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+++||.++|.|.|.-+|+.++..|+++|++|.++.+.
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 5789999999999888999999999999999887654
No 426
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=93.37 E-value=0.18 Score=44.44 Aligned_cols=50 Identities=28% Similarity=0.334 Sum_probs=41.1
Q ss_pred ccCCHHHHHHHHHH----hCCC-CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 147 LPCTPKGCLELLKR----SGVT-IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 147 ~PcTa~av~~lL~~----~~~~-l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
.++|.+|+...++. ++.+ ++|++|+|=|.|. ||..++.+|++.|+.|..+
T Consensus 7 ~~aTg~GV~~~~~~~~~~~~~~~l~g~~v~IqGfG~-VG~~~a~~l~~~Ga~vv~v 61 (244)
T PF00208_consen 7 SEATGYGVAYAIEAALEHLGGDSLEGKRVAIQGFGN-VGSHAARFLAELGAKVVAV 61 (244)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCHSSTTCEEEEEESSH-HHHHHHHHHHHTTEEEEEE
T ss_pred CcchHHHHHHHHHHHHHHcCCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEE
Confidence 47888888877665 3544 9999999999998 5999999999999986544
No 427
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=93.35 E-value=0.13 Score=46.16 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=32.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
+++||+|+|.|+++.+|..++..|+++|++|+.+.
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~ 37 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGII 37 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe
Confidence 57899999999999999999999999999988763
No 428
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.34 E-value=0.16 Score=42.99 Aligned_cols=36 Identities=28% Similarity=0.438 Sum_probs=32.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.++||+++|.|.+.-+|..++..|+++|++|++..+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~ 38 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN 38 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC
Confidence 367999999999999999999999999999987644
No 429
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.33 E-value=0.17 Score=42.05 Aligned_cols=31 Identities=16% Similarity=0.424 Sum_probs=26.3
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC-EEEEEcCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSH 200 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~ 200 (229)
+|+|||.|.+ |-.++..|...|. ++++++..
T Consensus 1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 32 (174)
T cd01487 1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDFD 32 (174)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 5899999995 9999999999998 58888654
No 430
>PTZ00188 adrenodoxin reductase; Provisional
Probab=93.32 E-value=0.29 Score=47.70 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=44.6
Q ss_pred CCCeEEEEccchhhhHHHHHHHh-hCCCEEEEEcCCCC------------------------------------------
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLL-KADATVTIVHSHTT------------------------------------------ 202 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~-~~~atVtv~~~~t~------------------------------------------ 202 (229)
.+|+|+|||+|.. |-.+|..|+ +.|+.|+++.+...
T Consensus 38 ~~krVAIVGaGPA-GlyaA~~Ll~~~g~~VtlfEk~p~pgGLvR~GVaPdh~~~k~v~~~f~~~~~~~~v~f~gnv~VG~ 116 (506)
T PTZ00188 38 KPFKVGIIGAGPS-ALYCCKHLLKHERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGV 116 (506)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHHhcCCeEEEEecCCCCccEEEEeCCCCCccHHHHHHHHHHHHhhCCeEEEeeeEecC
Confidence 5789999999998 999998654 67999999966321
Q ss_pred --CHHhhhccCcEEEEecCCCCC
Q 027064 203 --DPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 203 --~l~~~~~~aDivisA~g~p~~ 223 (229)
.++++..+.|.||.|+|....
T Consensus 117 Dvt~eeL~~~YDAVIlAtGA~~l 139 (506)
T PTZ00188 117 DLKMEELRNHYNCVIFCCGASEV 139 (506)
T ss_pred ccCHHHHHhcCCEEEEEcCCCCC
Confidence 233556778999999997654
No 431
>PRK10401 DNA-binding transcriptional regulator GalS; Provisional
Probab=93.31 E-value=1.9 Score=38.47 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=53.7
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEEC-CCcccHHHHHHHHHHHHHcCCeeeee
Q 027064 10 TIIDGKA-VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVG-GRKDSQSYVSMKRKACAEVGIKSFDI 74 (229)
Q Consensus 10 ~il~G~~-la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~~~~ 74 (229)
+.|+|+. ++++-++++.+.++++ |..| .++++.-+ .++--...++...+.|++.|......
T Consensus 20 rvLn~~~~Vs~~tr~kV~~~a~el----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~f~~~l~~gi~~~~~~~gy~~~~~ 95 (346)
T PRK10401 20 RVLNNSALVSADTREAVMKAVSEL----GYRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIG 95 (346)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHHhhcCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCEEEEE
Confidence 5677753 6666666666555554 5555 46666532 12222334566788999999987765
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCCcEEEEeC
Q 027064 75 DLPEQVSEAELISKVHELNVMPDVHGILVQL 105 (229)
Q Consensus 75 ~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~ 105 (229)
.... +.++..+.++.+.. .+++||++.-
T Consensus 96 ~~~~--~~~~~~~~i~~l~~-~~vdGiIi~~ 123 (346)
T PRK10401 96 NSYH--EAEKERHAIEVLIR-QRCNALIVHS 123 (346)
T ss_pred cCCC--ChHHHHHHHHHHHh-cCCCEEEEeC
Confidence 5442 33444556666644 3699999973
No 432
>PRK06720 hypothetical protein; Provisional
Probab=93.31 E-value=0.13 Score=42.51 Aligned_cols=36 Identities=33% Similarity=0.432 Sum_probs=32.4
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
.++||.++|.|++.-+|+.++..|.++|++|.++.+
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r 48 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI 48 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 468999999999987899999999999999988754
No 433
>PLN02206 UDP-glucuronate decarboxylase
Probab=93.28 E-value=0.24 Score=47.14 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=32.5
Q ss_pred CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 163 VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 163 ~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
...++++|+|.|+++.||+.++..|+++|.+|+.+.+
T Consensus 115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 3446799999999999999999999999999988753
No 434
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.26 E-value=0.16 Score=43.16 Aligned_cols=34 Identities=32% Similarity=0.455 Sum_probs=31.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
++.||+++|.|++.-+|..++..|+++|++|.++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~ 36 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIH 36 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3678999999999999999999999999998775
No 435
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=93.25 E-value=0.21 Score=45.78 Aligned_cols=54 Identities=24% Similarity=0.345 Sum_probs=45.8
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g 219 (229)
|+||+|+|||.|.= |..=|..|...|.+|++--+.-. ...+.+++||+|..-++
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~P 83 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLP 83 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCc
Confidence 68999999999996 99999999999999998766421 46688999999987654
No 436
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.24 E-value=0.22 Score=47.16 Aligned_cols=53 Identities=26% Similarity=0.265 Sum_probs=43.8
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 146 FLPCTPKGCLELLK----RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 146 ~~PcTa~av~~lL~----~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
--+.|.+|+....+ +.+.+++|++|+|=|.|+ ||.-++..|.+.||.|..|.-
T Consensus 182 r~~aTg~Gv~~~~~~a~~~~g~~l~G~rVaVQG~GN-Vg~~aa~~l~~~GAkvva~sd 238 (411)
T COG0334 182 RSEATGYGVFYAIREALKALGDDLEGARVAVQGFGN-VGQYAAEKLHELGAKVVAVSD 238 (411)
T ss_pred CCcccceehHHHHHHHHHHcCCCcCCCEEEEECccH-HHHHHHHHHHHcCCEEEEEEc
Confidence 44688888776554 567779999999999999 599999999999999887743
No 437
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=93.22 E-value=0.3 Score=44.44 Aligned_cols=52 Identities=23% Similarity=0.279 Sum_probs=38.1
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+||....++..+...+....|.+++|.|.|. +|..++.++...|+.|+++.+
T Consensus 161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~ 212 (357)
T PLN02514 161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_pred hhhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeC
Confidence 3454455555565555545799999999876 699999999999998766543
No 438
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=93.20 E-value=0.22 Score=45.52 Aligned_cols=59 Identities=24% Similarity=0.331 Sum_probs=49.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p~~ 223 (229)
.-+-+++=-||-|.+ |.+++..|.+.|++||+.+++-+ ...|..+.+|+||+.++.|.-
T Consensus 32 ~~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~ 104 (327)
T KOG0409|consen 32 TPSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKD 104 (327)
T ss_pred CcccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHh
Confidence 335689999999997 99999999999999999987532 345889999999999987754
No 439
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.20 E-value=0.17 Score=45.15 Aligned_cols=51 Identities=16% Similarity=0.298 Sum_probs=39.9
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC----EEEEEcCCCC---------------CHHhhhccCcEEEEecC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA----TVTIVHSHTT---------------DPESIVREADIVIAAAG 219 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a----tVtv~~~~t~---------------~l~~~~~~aDivisA~g 219 (229)
+++.+||.|.+ |.+++..|.+.|. .|+++++... +..+.+++||+||.|+.
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk 72 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK 72 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC
Confidence 47999999996 9999999998774 5888875321 23345788999999987
No 440
>PRK09526 lacI lac repressor; Reviewed
Probab=93.16 E-value=0.85 Score=40.53 Aligned_cols=93 Identities=14% Similarity=0.251 Sum_probs=57.9
Q ss_pred hhcccHH-HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEECC-CcccHHHHHHHHHHHHHcCCeeeee
Q 027064 10 TIIDGKA-VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVGG-RKDSQSYVSMKRKACAEVGIKSFDI 74 (229)
Q Consensus 10 ~il~G~~-la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg~-~~~s~~Y~~~k~k~a~~~Gi~~~~~ 74 (229)
++|+|+. ++++.++++.+.+++| |..| .++++.-.- ++--....+...+.|++.|.++...
T Consensus 24 rvLn~~~~vs~~tr~rV~~~a~el----gY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~i~ 99 (342)
T PRK09526 24 RVLNQASHVSAKTREKVEAAMAEL----NYVPNRVAQQLAGKQSLTIGLATTSLALHAPSQIAAAIKSRADQLGYSVVIS 99 (342)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHH----CCCcCHHHHHhhcCCCceEEEEeCCCCcccHHHHHHHHHHHHHHCCCEEEEE
Confidence 5678765 6666677766666555 4444 455554221 2222345677889999999998876
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 027064 75 DLPEQVSEAELISKVHELNVMPDVHGILVQLPLP 108 (229)
Q Consensus 75 ~l~~~~~~~el~~~I~~lN~d~~v~GIlvq~Plp 108 (229)
..+.+ +.++..+.++.+.. .++|||++..|..
T Consensus 100 ~~~~~-~~~~~~~~l~~l~~-~~vdGiii~~~~~ 131 (342)
T PRK09526 100 MVERS-GVEACQAAVNELLA-QRVSGVIINVPLE 131 (342)
T ss_pred eCCCC-hHHHHHHHHHHHHh-cCCCEEEEecCCC
Confidence 55432 22344456666644 4799999976654
No 441
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.15 E-value=0.11 Score=44.15 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=30.4
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.|+++|.|++.-+|+.++..|+++|++|+++.+.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 3789999999999999999999999999988653
No 442
>PLN00106 malate dehydrogenase
Probab=93.13 E-value=0.36 Score=44.33 Aligned_cols=58 Identities=24% Similarity=0.355 Sum_probs=42.3
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCC--EEEEEcC-----------------------CCCCHHhhhccCcEEEEecCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHS-----------------------HTTDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~-----------------------~t~~l~~~~~~aDivisA~g~ 220 (229)
..++|+|||+.+.||..++..|..++. .+.+++. .+.++.+.++.||+||.+.|.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 457999999934479999999985543 4444432 123456789999999999998
Q ss_pred CCC
Q 027064 221 AMM 223 (229)
Q Consensus 221 p~~ 223 (229)
|..
T Consensus 97 ~~~ 99 (323)
T PLN00106 97 PRK 99 (323)
T ss_pred CCC
Confidence 754
No 443
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.13 E-value=0.26 Score=45.14 Aligned_cols=54 Identities=28% Similarity=0.446 Sum_probs=40.2
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC--EEEEEcCCC---C----C------------------HHhhhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA--TVTIVHSHT---T----D------------------PESIVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~~t---~----~------------------l~~~~~~aDivisA~g~ 220 (229)
++|+|||+|. ||.++|.+|..++. .+.+.+... + | -.+.++.||+||-..|.
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~ 79 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGV 79 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCC
Confidence 5899999977 69999999988765 455554431 1 1 13669999999999997
Q ss_pred CC
Q 027064 221 AM 222 (229)
Q Consensus 221 p~ 222 (229)
|.
T Consensus 80 pr 81 (313)
T COG0039 80 PR 81 (313)
T ss_pred CC
Confidence 74
No 444
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.11 E-value=0.13 Score=43.94 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=30.8
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+|.++|.|.+..+|+.++..|+++|++|.++.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6899999999999999999999999999888653
No 445
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.16 Score=44.90 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=32.2
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||.++|.|.|.-+|+.++..|+++|++|+++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~ 38 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 38 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence 67999999999999999999999999999988754
No 446
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.10 E-value=0.15 Score=44.74 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=30.8
Q ss_pred CCCCeEEEEccch--hhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSN--IVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~--~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||.++|.|+|. -+|+.+|..|+++|++|.++.+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r 41 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ 41 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecC
Confidence 6899999999983 3599999999999999998754
No 447
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=93.09 E-value=0.38 Score=44.42 Aligned_cols=75 Identities=21% Similarity=0.234 Sum_probs=49.9
Q ss_pred ccCCHHHHHHHHHHhCCC-CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC---------------------H
Q 027064 147 LPCTPKGCLELLKRSGVT-IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD---------------------P 204 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~-l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~---------------------l 204 (229)
++|....++..+...+.. ..|..|+|.|.|. ||..+++++...|++|+++.+.... +
T Consensus 158 l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v 236 (375)
T PLN02178 158 LLCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKM 236 (375)
T ss_pred hhccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHH
Confidence 455555555556555432 3699999999876 6999999999999987776432111 0
Q ss_pred HhhhccCcEEEEecCCCC
Q 027064 205 ESIVREADIVIAAAGQAM 222 (229)
Q Consensus 205 ~~~~~~aDivisA~g~p~ 222 (229)
.+.+..+|+|+.++|.+.
T Consensus 237 ~~~~~~~D~vid~~G~~~ 254 (375)
T PLN02178 237 KEAVGTMDFIIDTVSAEH 254 (375)
T ss_pred HHhhCCCcEEEECCCcHH
Confidence 111223699999988763
No 448
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=93.08 E-value=0.18 Score=46.46 Aligned_cols=53 Identities=23% Similarity=0.335 Sum_probs=43.4
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcC-------------C---------------CCCHHhhhccCcEEEEecC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHS-------------H---------------TTDPESIVREADIVIAAAG 219 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~-------------~---------------t~~l~~~~~~aDivisA~g 219 (229)
++|.|+|+|.- |..+|..|.+.|..|++--+ . |.|+.+.+..||+|+.|++
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 58999999997 99999999999988877532 1 1267788889999999987
Q ss_pred CC
Q 027064 220 QA 221 (229)
Q Consensus 220 ~p 221 (229)
.-
T Consensus 81 s~ 82 (329)
T COG0240 81 SQ 82 (329)
T ss_pred hH
Confidence 54
No 449
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.06 E-value=0.21 Score=43.61 Aligned_cols=52 Identities=23% Similarity=0.332 Sum_probs=40.5
Q ss_pred CeEEEEccchhhhHHHHHHHhhCC---CEEEEEcCCC---------------CCHHhhhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKAD---ATVTIVHSHT---------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~---atVtv~~~~t---------------~~l~~~~~~aDivisA~g~ 220 (229)
.++.|||.|.+ |..++..|.+.| ..|+++++.. .+..+.+.++|+||.++..
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 47999999996 999999999887 5788887642 1334557789999998853
No 450
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=93.02 E-value=0.34 Score=44.09 Aligned_cols=52 Identities=19% Similarity=0.020 Sum_probs=38.8
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
+||....++..|......-.|.+|+|.|.++.||..+++++..+|++|+.+.
T Consensus 139 l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~ 190 (348)
T PLN03154 139 LGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSA 190 (348)
T ss_pred cccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEc
Confidence 3555555566665443334799999999977789999999999999877653
No 451
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.02 E-value=0.23 Score=45.35 Aligned_cols=54 Identities=24% Similarity=0.399 Sum_probs=39.1
Q ss_pred eEEEEccchhhhHHHHHHHhhCCC--EEEEEcC-----------------------CCCCHHhhhccCcEEEEecCCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADA--TVTIVHS-----------------------HTTDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~a--tVtv~~~-----------------------~t~~l~~~~~~aDivisA~g~p~ 222 (229)
+|+|||+++.||..+|..|..++. .+.+++. .+.++.+.++.|||||.+.|.|.
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 799999944479999999987764 3443321 11223577999999999999874
No 452
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.02 E-value=0.13 Score=44.80 Aligned_cols=35 Identities=20% Similarity=0.092 Sum_probs=31.6
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+|.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 47899999999999999999999999999988763
No 453
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=93.00 E-value=0.56 Score=41.15 Aligned_cols=51 Identities=25% Similarity=0.249 Sum_probs=37.8
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
+|+.+..++..++...+ -.|..++|.|.++.+|..++.++...|++|+++.
T Consensus 121 ~~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~ 171 (324)
T cd08292 121 LIAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLV 171 (324)
T ss_pred ccccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEe
Confidence 34555555555554333 3689999999988889999999999999877663
No 454
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.00 E-value=0.18 Score=42.62 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=30.1
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
++||.++|.|.+.-+|+.++..|.++|++|.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~ 33 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAG 33 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEE
Confidence 468999999999999999999999999998774
No 455
>PRK07831 short chain dehydrogenase; Provisional
Probab=92.98 E-value=0.15 Score=43.87 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=31.0
Q ss_pred CCCCCeEEEEccch-hhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSN-IVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~-~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.++||.++|.|.++ -+|+.++..|.++|++|+++.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~ 51 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH 51 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence 35689999999853 36999999999999999987553
No 456
>PRK06823 ornithine cyclodeaminase; Validated
Probab=92.96 E-value=0.21 Score=45.55 Aligned_cols=27 Identities=7% Similarity=0.215 Sum_probs=21.7
Q ss_pred CHHhhhccCcEEEEecCCCCC-CCCCCC
Q 027064 203 DPESIVREADIVIAAAGQAMM-VTMGIL 229 (229)
Q Consensus 203 ~l~~~~~~aDivisA~g~p~~-i~~~~v 229 (229)
+.++.++.||||++||+.... +..+|+
T Consensus 185 ~~~~av~~ADIV~taT~s~~P~~~~~~l 212 (315)
T PRK06823 185 DAAEVAHAANLIVTTTPSREPLLQAEDI 212 (315)
T ss_pred CHHHHhcCCCEEEEecCCCCceeCHHHc
Confidence 456788999999999998776 477764
No 457
>PRK07024 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.12 Score=44.48 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=30.9
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+|+|+|.|.+.-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999999999999999999988753
No 458
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=92.95 E-value=0.36 Score=43.23 Aligned_cols=52 Identities=19% Similarity=0.027 Sum_probs=39.4
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
+||....++..|.+...--.|.+|+|.|+++.||..+++++..+|++|+.+.
T Consensus 132 l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~ 183 (338)
T cd08295 132 LGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSA 183 (338)
T ss_pred cccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe
Confidence 3555556666665544334799999999977789999999999999877643
No 459
>PRK08177 short chain dehydrogenase; Provisional
Probab=92.94 E-value=0.2 Score=42.09 Aligned_cols=33 Identities=27% Similarity=0.293 Sum_probs=29.9
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
|+|+|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 689999999999999999999999999987654
No 460
>PRK08324 short chain dehydrogenase; Validated
Probab=92.90 E-value=0.18 Score=50.40 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=32.6
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+.||.++|.|.++-+|+.++..|.++|++|+++.+.
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~ 455 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLD 455 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence 4689999999987778999999999999999888653
No 461
>PRK06483 dihydromonapterin reductase; Provisional
Probab=92.89 E-value=0.18 Score=42.52 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=30.8
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+|.++|.|++.-+|+.++..|.++|++|+++.+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT 35 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 5899999999989999999999999999888664
No 462
>PLN02780 ketoreductase/ oxidoreductase
Probab=92.88 E-value=0.1 Score=47.25 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.8
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.|+.++|.|+|.-+|+.+|..|+++|++|.++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 69999999999989999999999999999887653
No 463
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.86 E-value=0.17 Score=43.73 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=30.2
Q ss_pred CCCCeEEEEcc--chhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGR--SNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~--s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
++||.++|.|+ |.-+|+.++..|+++|++|+++.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r 41 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGF 41 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecC
Confidence 67999999997 445699999999999999988753
No 464
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.79 E-value=0.19 Score=42.08 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=29.3
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEE
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTI 196 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv 196 (229)
+..|+++|+|+++.+|+.++..|.++|++|++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~ 35 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVV 35 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEE
Confidence 45789999999999999999999999999876
No 465
>PRK12747 short chain dehydrogenase; Provisional
Probab=92.76 E-value=0.2 Score=42.69 Aligned_cols=34 Identities=35% Similarity=0.407 Sum_probs=31.1
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
++||.++|.|.+.-+|+.++..|.++|++|.++.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~ 35 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHY 35 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 4689999999999999999999999999998863
No 466
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=92.74 E-value=0.39 Score=42.91 Aligned_cols=52 Identities=31% Similarity=0.367 Sum_probs=38.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcC
Q 027064 146 FLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHS 199 (229)
Q Consensus 146 ~~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~ 199 (229)
.++|....++..++..++ ..|.+|+|.|.|. +|..+++++...|+. |+++.+
T Consensus 144 ~l~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~ 196 (339)
T cd08239 144 LLLCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDP 196 (339)
T ss_pred hhcchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECC
Confidence 345555555555665554 3599999999865 699999999999998 887654
No 467
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.69 E-value=0.37 Score=45.25 Aligned_cols=56 Identities=25% Similarity=0.418 Sum_probs=42.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCC-----HH------------hhhccCcEEEEecCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTD-----PE------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~-----l~------------~~~~~aDivisA~g~p 221 (229)
+.+|++.|+|-|.. |+..+.+|+++|+.|+.++..... +. +.++..|+||...|.|
T Consensus 4 ~~~~~i~v~G~G~s-G~s~~~~l~~~G~~v~~~D~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~d~vv~spgi~ 76 (438)
T PRK03806 4 YQGKKVVIIGLGLT-GLSCVDFFLARGVTPRVIDTRITPPGLDKLPENVERHTGSLNDEWLLAADLIVASPGIA 76 (438)
T ss_pred cCCCEEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCCCchhHHHHhcCCEEEeCCCCHHHhcCCCEEEECCCCC
Confidence 46899999999997 999999999999999999864211 11 1234578888777765
No 468
>PLN02240 UDP-glucose 4-epimerase
Probab=92.66 E-value=0.2 Score=44.96 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.8
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
.+.+|+|+|.|+++.+|+.++..|.++|++|+++.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVID 36 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 46789999999999999999999999999998874
No 469
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.63 E-value=0.44 Score=44.57 Aligned_cols=54 Identities=22% Similarity=0.351 Sum_probs=43.2
Q ss_pred CcccCCHHHHHHHHHHhC-CCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 145 LFLPCTPKGCLELLKRSG-VTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 145 ~~~PcTa~av~~lL~~~~-~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
-++=+++..+-++.+.++ .+...++++|+|.|.+ |+.++..|.+.|..|++...
T Consensus 208 l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~G~~-g~~l~~~L~~~~~~v~vid~ 262 (453)
T PRK09496 208 VYFIGAREHIRAVMSEFGRLEKPVKRVMIVGGGNI-GYYLAKLLEKEGYSVKLIER 262 (453)
T ss_pred EEEEeCHHHHHHHHHHhCccCCCCCEEEEECCCHH-HHHHHHHHHhCCCeEEEEEC
Confidence 345577888877777665 3356799999999995 99999999999999888844
No 470
>PRK07454 short chain dehydrogenase; Provisional
Probab=92.61 E-value=0.2 Score=42.35 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=31.5
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
++|.++|.|.+.-+|+.++..|+++|++|+++.+.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999998889999999999999999988663
No 471
>TIGR02417 fruct_sucro_rep D-fructose-responsive transcription factor. Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer.
Probab=92.61 E-value=1 Score=39.88 Aligned_cols=88 Identities=19% Similarity=0.258 Sum_probs=58.3
Q ss_pred hhcccHH----HHHHHHHHHHHHHHHHHhcCCCCC-------------eEEEEEEC-CCcccHHHHHHHHHHHHHcCCee
Q 027064 10 TIIDGKA----VAQTIRSEIAEEVRLLSEKYGKVP-------------GLAVVIVG-GRKDSQSYVSMKRKACAEVGIKS 71 (229)
Q Consensus 10 ~il~G~~----la~~i~~~i~~~~~~l~~~~~~~P-------------~LaiI~vg-~~~~s~~Y~~~k~k~a~~~Gi~~ 71 (229)
++|+|+. ++++.++++.+.++++ |.+| .++++.-. .++-.....+...+.|++.|..+
T Consensus 18 rvLn~~~~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~i~~~~~~~gy~~ 93 (327)
T TIGR02417 18 YVINGKAKEYRISQETVERVMAVVREQ----GYQPNIHAASLRAGRSRTIGLVIPDLENYSYARIAKELEQQCREAGYQL 93 (327)
T ss_pred HHHcCCCCCCccCHHHHHHHHHHHHHh----CCCCCHHHHHhhcCCCceEEEEeCCCCCccHHHHHHHHHHHHHHCCCEE
Confidence 6789985 8888888888777765 3333 45555422 23333445678889999999998
Q ss_pred eeecCCCCCCHHHHHHHHHHhcCCCCCcEEEEe
Q 027064 72 FDIDLPEQVSEAELISKVHELNVMPDVHGILVQ 104 (229)
Q Consensus 72 ~~~~l~~~~~~~el~~~I~~lN~d~~v~GIlvq 104 (229)
....... +.++..+.++.+... +++||++.
T Consensus 94 ~i~~~~~--~~~~~~~~~~~l~~~-~vdgiIi~ 123 (327)
T TIGR02417 94 LIACSDD--NPDQEKVVIENLLAR-QVDALIVA 123 (327)
T ss_pred EEEeCCC--CHHHHHHHHHHHHHc-CCCEEEEe
Confidence 7765543 334445566665443 69999986
No 472
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=92.59 E-value=0.44 Score=48.18 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=31.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
..||+|+|||+|.. |..+|..|.++|..|+++..
T Consensus 429 ~~~~~V~IIGaGpA-Gl~aA~~l~~~G~~V~v~e~ 462 (752)
T PRK12778 429 KNGKKVAVIGSGPA-GLSFAGDLAKRGYDVTVFEA 462 (752)
T ss_pred CCCCEEEEECcCHH-HHHHHHHHHHCCCeEEEEec
Confidence 46999999999997 99999999999999999965
No 473
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.59 E-value=0.19 Score=42.53 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=30.1
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEE
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~ 197 (229)
+.||+++|.|++.-+|+.++..|+++|++|.++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~ 34 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVN 34 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 468999999999999999999999999998764
No 474
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=92.57 E-value=0.61 Score=42.58 Aligned_cols=51 Identities=29% Similarity=0.376 Sum_probs=34.5
Q ss_pred ccCCHHHHHHHH-HHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcC
Q 027064 147 LPCTPKGCLELL-KRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHS 199 (229)
Q Consensus 147 ~PcTa~av~~lL-~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~ 199 (229)
++|.....+..+ +..++ -.|.+|+|.|.|. +|..+++++..+|+ .|+++.+
T Consensus 172 ~~~~~~ta~~~~~~~~~i-~~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~ 224 (371)
T cd08281 172 FGCAVLTGVGAVVNTAGV-RPGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDL 224 (371)
T ss_pred hcchHHHHHHHHHhccCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcC
Confidence 344433334333 33333 3689999999865 69999999999999 5776643
No 475
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=92.55 E-value=0.15 Score=45.55 Aligned_cols=35 Identities=23% Similarity=0.179 Sum_probs=31.7
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
..||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r 38 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACR 38 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 57899999999998999999999999999988754
No 476
>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase.
Probab=92.52 E-value=0.27 Score=46.03 Aligned_cols=52 Identities=23% Similarity=0.371 Sum_probs=39.4
Q ss_pred eEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----C----HH-------------hhhccCcEEEEecCCC
Q 027064 169 RAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----D----PE-------------SIVREADIVIAAAGQA 221 (229)
Q Consensus 169 ~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~----l~-------------~~~~~aDivisA~g~p 221 (229)
++.|||-|.. |+++|.+|.++|++|++++.... . +. +.+..+|+||...|.|
T Consensus 1 ~~~~iG~G~~-G~a~a~~l~~~G~~V~~sD~~~~~~~~~~~~~~~~~~gi~~~~g~~~~~~~~~d~vv~sp~i~ 73 (433)
T TIGR01087 1 KILILGLGKT-GRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLNNADLVVKSPGIP 73 (433)
T ss_pred CEEEEEeCHh-HHHHHHHHHHCCCEEEEEeCCCCccchhHHHHHhhccCcEEEecCchHHhccCCEEEECCCCC
Confidence 4789999997 99999999999999999986421 1 11 1134578888877765
No 477
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=92.52 E-value=0.24 Score=42.06 Aligned_cols=39 Identities=26% Similarity=0.402 Sum_probs=34.2
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT 202 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~ 202 (229)
.+.+|.++|.|+|.-+|+.++..|.++|++|+++.+.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 467999999999988899999999999999888876643
No 478
>PRK05855 short chain dehydrogenase; Validated
Probab=92.49 E-value=0.26 Score=46.89 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.+.+++++|+|+|.-+|+.++..|.++|++|+++.+.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~ 348 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDID 348 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999999988664
No 479
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.48 E-value=0.38 Score=44.07 Aligned_cols=55 Identities=15% Similarity=0.329 Sum_probs=40.3
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCC-------EEEEEcCCC--------------------------CCHHhhhccCcEE
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADA-------TVTIVHSHT--------------------------TDPESIVREADIV 214 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~a-------tVtv~~~~t--------------------------~~l~~~~~~aDiv 214 (229)
++|.|||+++.||-.++..|..+|. .+.+.+... .+..+.+++||||
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv 82 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA 82 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence 5899999955579999999987654 355554411 1233668999999
Q ss_pred EEecCCCC
Q 027064 215 IAAAGQAM 222 (229)
Q Consensus 215 isA~g~p~ 222 (229)
|.+.|.|.
T Consensus 83 vitaG~~~ 90 (322)
T cd01338 83 LLVGAKPR 90 (322)
T ss_pred EEeCCCCC
Confidence 99999874
No 480
>PLN02858 fructose-bisphosphate aldolase
Probab=92.47 E-value=0.25 Score=53.50 Aligned_cols=56 Identities=14% Similarity=0.225 Sum_probs=47.1
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC--------------CHHhhhccCcEEEEecCCCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT--------------DPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~--------------~l~~~~~~aDivisA~g~p~ 222 (229)
++++|-+||-|.+ |.|+|..|++.|.+|++.|+... +..+..++||+||+....+.
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~ 72 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPD 72 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChH
Confidence 4678999999996 99999999999999999987421 45577889999999976543
No 481
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=92.47 E-value=0.27 Score=47.49 Aligned_cols=54 Identities=28% Similarity=0.336 Sum_probs=41.5
Q ss_pred CeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC---------------------------------CCHHhhhccCc
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT---------------------------------TDPESIVREAD 212 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t---------------------------------~~l~~~~~~aD 212 (229)
.+|+|||.|- ||.|+|..|+.+| .+|+.++... .+..+.+++||
T Consensus 2 m~I~ViG~Gy-vGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ad 80 (473)
T PLN02353 2 VKICCIGAGY-VGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEAD 80 (473)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCC
Confidence 4799999999 5999999999885 6787774311 12234578899
Q ss_pred EEEEecCCCC
Q 027064 213 IVIAAAGQAM 222 (229)
Q Consensus 213 ivisA~g~p~ 222 (229)
++|.++|-|-
T Consensus 81 vi~I~V~TP~ 90 (473)
T PLN02353 81 IVFVSVNTPT 90 (473)
T ss_pred EEEEEeCCCC
Confidence 9999999884
No 482
>PRK07074 short chain dehydrogenase; Provisional
Probab=92.46 E-value=0.17 Score=43.20 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=30.6
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+|.++|.|.+.-+|+.++..|.++|++|+++.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~ 35 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID 35 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5889999998889999999999999999888654
No 483
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=92.44 E-value=0.51 Score=44.24 Aligned_cols=61 Identities=21% Similarity=0.303 Sum_probs=49.3
Q ss_pred CCCCCeEEEEccc---------hhhhHHHHHHHhhCCCEEEEEcCCC-----------CCHHhhhccCcEEEEecCCCCC
Q 027064 164 TIKGKRAVVVGRS---------NIVGLPVSLLLLKADATVTIVHSHT-----------TDPESIVREADIVIAAAGQAMM 223 (229)
Q Consensus 164 ~l~gk~v~ViG~s---------~~VG~pla~~L~~~~atVtv~~~~t-----------~~l~~~~~~aDivisA~g~p~~ 223 (229)
++.|++|.|.|-+ +.-...++..|.++|+.|.+.+-.. .++.+.++.||.||.+|..+.|
T Consensus 310 ~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~v~~t~~~~~ 389 (411)
T TIGR03026 310 PLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADALVILTDHDEF 389 (411)
T ss_pred cccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEEEEecCCHHH
Confidence 5799999999953 2236788999999999999886542 2566788999999999999887
Q ss_pred C
Q 027064 224 V 224 (229)
Q Consensus 224 i 224 (229)
-
T Consensus 390 ~ 390 (411)
T TIGR03026 390 K 390 (411)
T ss_pred h
Confidence 4
No 484
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.43 E-value=0.21 Score=45.05 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=30.5
Q ss_pred CCCCCCeEEEEccc--hhhhHHHHHHHhhCCCEEEEE
Q 027064 163 VTIKGKRAVVVGRS--NIVGLPVSLLLLKADATVTIV 197 (229)
Q Consensus 163 ~~l~gk~v~ViG~s--~~VG~pla~~L~~~~atVtv~ 197 (229)
+++.||.++|-|.| .-+|+.+|..|+++||+|.++
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~ 40 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVG 40 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 56899999999994 335999999999999999885
No 485
>PLN02572 UDP-sulfoquinovose synthase
Probab=92.43 E-value=0.18 Score=47.82 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=32.3
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEc
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVH 198 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~ 198 (229)
.+++|+|+|.|+++.+|+.++..|+++|++|++++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVD 78 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 57899999999999999999999999999999864
No 486
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=92.41 E-value=0.57 Score=42.23 Aligned_cols=65 Identities=17% Similarity=0.263 Sum_probs=43.8
Q ss_pred HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCC-EEEEEcCCC-------------------CCHHhhhc---cCc
Q 027064 156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADA-TVTIVHSHT-------------------TDPESIVR---EAD 212 (229)
Q Consensus 156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~a-tVtv~~~~t-------------------~~l~~~~~---~aD 212 (229)
..+++.+. ..|.+|+|+|.|. ||..+++++...|+ .|+++.+.. .+..+..+ ..|
T Consensus 160 ~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D 237 (343)
T PRK09880 160 HAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFD 237 (343)
T ss_pred HHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCC
Confidence 33444443 3799999999876 69999999999999 566554321 12222222 269
Q ss_pred EEEEecCCCC
Q 027064 213 IVIAAAGQAM 222 (229)
Q Consensus 213 ivisA~g~p~ 222 (229)
++|.++|.+.
T Consensus 238 ~vid~~G~~~ 247 (343)
T PRK09880 238 VSFEVSGHPS 247 (343)
T ss_pred EEEECCCCHH
Confidence 9999999764
No 487
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=92.41 E-value=0.3 Score=49.01 Aligned_cols=52 Identities=27% Similarity=0.308 Sum_probs=41.6
Q ss_pred CeEEEEccchhhhHHHHHHHhhCC--CEEEEEcCCC----------------CCHHhhhccCcEEEEecCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHT----------------TDPESIVREADIVIAAAGQ 220 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~--atVtv~~~~t----------------~~l~~~~~~aDivisA~g~ 220 (229)
++|.|||.|.+ |..++..|.+.| ..|+++++.. .++.+.+.++|+||.|++.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~ 73 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPV 73 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCH
Confidence 78999999995 999999999988 4788876542 2344557899999999873
No 488
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.39 E-value=0.3 Score=43.42 Aligned_cols=51 Identities=12% Similarity=0.219 Sum_probs=39.1
Q ss_pred CeEEEEccchhhhHHHHHHHhhCC----CEEEEEcCCC-----------------CCHHhhhccCcEEEEecC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKAD----ATVTIVHSHT-----------------TDPESIVREADIVIAAAG 219 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~----atVtv~~~~t-----------------~~l~~~~~~aDivisA~g 219 (229)
.++.|||.|.+ |..++..|.+.| ..|++++++. .+..+..+++|+||.|+.
T Consensus 2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavp 73 (277)
T PRK06928 2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVP 73 (277)
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecC
Confidence 36899999996 999999999887 5677775532 133455778999999987
No 489
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=92.35 E-value=0.16 Score=43.06 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=29.1
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
|.++|.|.+..+|+.++..|+++|+.|+++.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 33 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLN 33 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999989999999999999998877653
No 490
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=92.35 E-value=0.61 Score=42.31 Aligned_cols=52 Identities=23% Similarity=0.234 Sum_probs=34.5
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcC
Q 027064 147 LPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHS 199 (229)
Q Consensus 147 ~PcTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~ 199 (229)
++|...+.+..+.....--.|.+|+|.|.|. ||..++.++...|++ |+.+.+
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~ 209 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDI 209 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcC
Confidence 3444434343333222223699999999765 699999999999995 776643
No 491
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=92.35 E-value=0.45 Score=42.39 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=40.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhhCCCE-EEEEcCCCCCHH-----------h-hhccCcEEEEecCCCCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLKADAT-VTIVHSHTTDPE-----------S-IVREADIVIAAAGQAMM 223 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~~~at-Vtv~~~~t~~l~-----------~-~~~~aDivisA~g~p~~ 223 (229)
..|++++|+|.|. ||..+++++...|++ |.++......+. + .-..+|+||.++|.+..
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~ 213 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSL 213 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHH
Confidence 3689999999887 699999999999997 445533211111 0 11247999999998753
No 492
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.34 E-value=0.41 Score=44.26 Aligned_cols=72 Identities=22% Similarity=0.344 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCCCHHhhhc--cCcEEEEecCCCC
Q 027064 149 CTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVR--EADIVIAAAGQAM 222 (229)
Q Consensus 149 cTa~av~~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~~l~~~~~--~aDivisA~g~p~ 222 (229)
|----+..-|++++.. .||++.|+|.|+ +|--..++-.+.|+.|++..+..+..+++++ -||..|.++.-|.
T Consensus 165 CaGITvYspLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d 238 (360)
T KOG0023|consen 165 CAGITVYSPLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPD 238 (360)
T ss_pred hcceEEeehhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHH
Confidence 4334456778999988 999999999999 7999999989999999999877666677766 4888887775443
No 493
>PRK04148 hypothetical protein; Provisional
Probab=92.32 E-value=0.45 Score=38.46 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=34.0
Q ss_pred HHHHHhCCCCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 156 ELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 156 ~lL~~~~~~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
+.|.++....+|+++++||-| . |..+|..|.+.|+.|+.++..
T Consensus 6 ~~l~~~~~~~~~~kileIG~G-f-G~~vA~~L~~~G~~ViaIDi~ 48 (134)
T PRK04148 6 EFIAENYEKGKNKKIVELGIG-F-YFKVAKKLKESGFDVIVIDIN 48 (134)
T ss_pred HHHHHhcccccCCEEEEEEec-C-CHHHHHHHHHCCCEEEEEECC
Confidence 344444344578999999999 4 999999999999999998764
No 494
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=92.30 E-value=0.39 Score=47.92 Aligned_cols=34 Identities=29% Similarity=0.568 Sum_probs=31.1
Q ss_pred CCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCC
Q 027064 166 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSH 200 (229)
Q Consensus 166 ~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~ 200 (229)
.||+|+|||+|.. |..+|..|..+|..|+++...
T Consensus 192 ~~k~VaIIGaGpA-Gl~aA~~La~~G~~Vtv~e~~ 225 (652)
T PRK12814 192 SGKKVAIIGAGPA-GLTAAYYLLRKGHDVTIFDAN 225 (652)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCcEEEEecC
Confidence 6899999999997 999999999999999998653
No 495
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=92.28 E-value=0.31 Score=44.63 Aligned_cols=54 Identities=24% Similarity=0.294 Sum_probs=38.1
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCE---EEEEcCCC---C------------CHH-hhhccCcEEEEecCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADAT---VTIVHSHT---T------------DPE-SIVREADIVIAAAGQ 220 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~at---Vtv~~~~t---~------------~l~-~~~~~aDivisA~g~ 220 (229)
+.+|.|+|+++.+|+-+..+|.+++.. +....+.. + ++. ..+..+|+||.|+|.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGG 73 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCCh
Confidence 468999999999999999999997653 34443321 0 111 223678999999874
No 496
>PLN02852 ferredoxin-NADP+ reductase
Probab=92.28 E-value=0.38 Score=46.67 Aligned_cols=35 Identities=29% Similarity=0.295 Sum_probs=30.5
Q ss_pred CCCCeEEEEccchhhhHHHHHHHhh--CCCEEEEEcCC
Q 027064 165 IKGKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSH 200 (229)
Q Consensus 165 l~gk~v~ViG~s~~VG~pla~~L~~--~~atVtv~~~~ 200 (229)
-.+|+|+|||+|.. |...|..|++ .|+.|+++.+.
T Consensus 24 ~~~~~VaIVGaGPA-Gl~AA~~L~~~~~g~~Vtv~E~~ 60 (491)
T PLN02852 24 SEPLHVCVVGSGPA-GFYTADKLLKAHDGARVDIIERL 60 (491)
T ss_pred CCCCcEEEECccHH-HHHHHHHHHhhCCCCeEEEEecC
Confidence 35799999999998 9999999986 79999999663
No 497
>PLN02583 cinnamoyl-CoA reductase
Probab=92.25 E-value=0.24 Score=43.96 Aligned_cols=36 Identities=25% Similarity=0.181 Sum_probs=32.0
Q ss_pred CCCCCeEEEEccchhhhHHHHHHHhhCCCEEEEEcC
Q 027064 164 TIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHS 199 (229)
Q Consensus 164 ~l~gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~ 199 (229)
+-++|+|+|.|+++.+|+.++..|+++|+.|+.+.+
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R 38 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQ 38 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 346899999999999999999999999999987754
No 498
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.23 E-value=0.36 Score=45.08 Aligned_cols=52 Identities=21% Similarity=0.293 Sum_probs=41.1
Q ss_pred CeEEEEccchhhhHHHHHHHhhCC-------CEEEEEcCC---------------------------------CCCHHhh
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKAD-------ATVTIVHSH---------------------------------TTDPESI 207 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~-------atVtv~~~~---------------------------------t~~l~~~ 207 (229)
.+|+|||+|.. |-.+|..|.+.| .+|++..+. |.|+.+.
T Consensus 12 ~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~ea 90 (365)
T PTZ00345 12 LKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKEA 90 (365)
T ss_pred CeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHHH
Confidence 59999999997 999999999876 577764221 1256677
Q ss_pred hccCcEEEEecCC
Q 027064 208 VREADIVIAAAGQ 220 (229)
Q Consensus 208 ~~~aDivisA~g~ 220 (229)
++.||+||.|++.
T Consensus 91 v~~aDiIvlAVPs 103 (365)
T PTZ00345 91 VEDADLLIFVIPH 103 (365)
T ss_pred HhcCCEEEEEcCh
Confidence 8999999999874
No 499
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=92.22 E-value=0.29 Score=43.55 Aligned_cols=53 Identities=23% Similarity=0.402 Sum_probs=40.0
Q ss_pred CeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCCC----C------HHhhhc--cCcEEEEecCCC
Q 027064 168 KRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTT----D------PESIVR--EADIVIAAAGQA 221 (229)
Q Consensus 168 k~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t~----~------l~~~~~--~aDivisA~g~p 221 (229)
++|+|.|+++.+|..++..|.++| .|+.+.+... | +.+.++ +.|+||.+.+..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~ 65 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHT 65 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence 479999999999999999999999 7877765431 2 223444 479999887643
No 500
>PLN02858 fructose-bisphosphate aldolase
Probab=92.19 E-value=0.24 Score=53.54 Aligned_cols=55 Identities=18% Similarity=0.343 Sum_probs=46.4
Q ss_pred CCeEEEEccchhhhHHHHHHHhhCCCEEEEEcCCC--------------CCHHhhhccCcEEEEecCCCC
Q 027064 167 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHT--------------TDPESIVREADIVIAAAGQAM 222 (229)
Q Consensus 167 gk~v~ViG~s~~VG~pla~~L~~~~atVtv~~~~t--------------~~l~~~~~~aDivisA~g~p~ 222 (229)
.++|.+||-|.+ |.|++..|++.|.+|+++++.. .+..+..+++|+||.++..|.
T Consensus 324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~ 392 (1378)
T PLN02858 324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEV 392 (1378)
T ss_pred CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChH
Confidence 388999999996 9999999999999999997642 145577889999999988654
Done!