Query 027065
Match_columns 229
No_of_seqs 211 out of 2572
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:51:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bcv_A Putative glycosyltransf 99.9 3.6E-25 1.2E-29 177.5 16.8 109 65-184 4-112 (240)
2 1qg8_A Protein (spore coat pol 99.9 3E-25 1E-29 179.6 13.1 121 66-197 1-129 (255)
3 1xhb_A Polypeptide N-acetylgal 99.9 1.9E-22 6.5E-27 177.5 15.1 119 63-190 26-148 (472)
4 3f1y_A Mannosyl-3-phosphoglyce 99.9 2.1E-23 7E-28 179.1 8.0 125 65-194 93-218 (387)
5 3ckj_A Putative uncharacterize 99.9 2.5E-22 8.5E-27 169.2 13.4 123 64-195 46-171 (329)
6 2z86_A Chondroitin synthase; G 99.9 5.8E-22 2E-26 179.9 16.6 124 64-198 373-496 (625)
7 2d7i_A Polypeptide N-acetylgal 99.9 1.8E-22 6.2E-27 181.6 11.4 117 63-189 109-229 (570)
8 4hg6_A Cellulose synthase subu 99.9 2.5E-21 8.7E-26 180.2 17.8 123 62-195 136-277 (802)
9 2ffu_A Ppgalnact-2, polypeptid 99.9 2.7E-21 9.3E-26 171.4 11.6 112 63-187 63-177 (501)
10 3l7i_A Teichoic acid biosynthe 99.8 8.8E-23 3E-27 188.5 0.0 115 65-189 1-115 (729)
11 4fix_A UDP-galactofuranosyl tr 99.8 1.2E-19 4.1E-24 165.2 10.3 128 63-198 177-310 (657)
12 2z86_A Chondroitin synthase; G 99.8 4.6E-19 1.6E-23 160.9 14.0 118 64-192 91-210 (625)
13 2bo4_A Mannosylglycerate synth 99.7 1.1E-16 3.8E-21 137.3 12.7 113 69-189 2-126 (397)
14 2wvl_A Mannosyl-3-phosphoglyce 99.7 1.3E-15 4.6E-20 126.2 12.9 100 66-178 53-181 (391)
15 2nxv_A ATP synthase subunits r 99.6 8.2E-16 2.8E-20 124.4 6.8 94 64-189 14-111 (249)
16 2zu9_A Mannosyl-3-phosphoglyce 99.5 3.8E-14 1.3E-18 120.3 12.3 104 67-183 52-186 (394)
17 2fy7_A Beta-1,4-galactosyltran 99.5 7.2E-14 2.5E-18 115.2 7.4 80 64-173 63-146 (287)
18 1fo8_A Alpha-1,3-mannosyl-glyc 99.2 6.6E-11 2.3E-15 99.5 9.9 111 67-189 3-135 (343)
19 3lw6_A FI08434P, beta-4-galact 96.8 0.0042 1.4E-07 50.1 7.5 78 65-172 50-129 (287)
20 3cu0_A Galactosylgalactosylxyl 96.8 0.014 4.6E-07 47.0 10.4 101 63-177 18-153 (281)
21 1v84_A Galactosylgalactosylxyl 96.7 0.017 6E-07 45.8 10.5 100 65-178 2-128 (253)
22 2d0j_A Galactosylgalactosylxyl 96.3 0.033 1.1E-06 44.0 9.7 101 65-177 2-121 (246)
23 3k8d_A 3-deoxy-manno-octuloson 96.0 0.12 4.2E-06 41.3 11.9 104 66-185 17-136 (264)
24 3oam_A 3-deoxy-manno-octuloson 95.9 0.33 1.1E-05 38.3 14.0 72 104-185 43-120 (252)
25 1qwj_A Cytidine monophospho-N- 95.4 0.35 1.2E-05 37.4 12.4 73 104-185 45-124 (229)
26 1omz_A Alpha-1,4-N-acetylhexos 95.2 0.019 6.6E-07 46.7 4.5 116 65-193 27-143 (293)
27 3tqd_A 3-deoxy-manno-octuloson 95.2 0.77 2.6E-05 36.4 13.9 74 103-186 49-128 (256)
28 2wee_A MOBA-related protein; u 94.6 0.08 2.7E-06 39.8 6.5 85 79-180 32-120 (197)
29 1ezi_A CMP-N-acetylneuraminic 94.4 0.28 9.6E-06 37.8 9.3 72 104-184 46-125 (228)
30 2waw_A MOBA relate protein; un 93.6 0.15 5.1E-06 38.3 6.1 70 104-180 47-120 (199)
31 1h7e_A 3-deoxy-manno-octuloson 93.5 1.1 3.9E-05 34.6 11.4 71 104-184 44-117 (245)
32 3ngw_A Molybdopterin-guanine d 93.2 0.82 2.8E-05 35.0 9.9 70 105-184 40-111 (208)
33 4fcu_A 3-deoxy-manno-octuloson 93.1 1.3 4.4E-05 35.1 11.1 75 103-186 42-121 (253)
34 3juk_A UDP-glucose pyrophospho 93.0 0.15 5E-06 40.9 5.5 55 132-186 96-154 (281)
35 4fce_A Bifunctional protein GL 92.9 0.33 1.1E-05 41.6 7.9 88 79-183 37-126 (459)
36 1vic_A 3-deoxy-manno-octuloson 92.6 2.3 7.9E-05 33.4 12.1 87 79-185 28-120 (262)
37 1vgw_A 4-diphosphocytidyl-2C-m 92.3 1 3.5E-05 34.5 9.4 75 104-185 51-133 (231)
38 3st8_A Bifunctional protein GL 92.3 2.1 7.3E-05 37.2 12.4 105 71-187 34-142 (501)
39 2y6p_A 3-deoxy-manno-octuloson 91.8 1.4 4.9E-05 33.8 9.7 86 79-186 28-116 (234)
40 2c0n_A A197; thermophil protei 91.7 0.29 9.8E-06 37.3 5.2 42 146-190 39-87 (203)
41 2yc3_A 2-C-methyl-D-erythritol 91.5 2.2 7.6E-05 32.5 10.6 76 104-185 49-127 (228)
42 2ux8_A Glucose-1-phosphate uri 91.5 0.55 1.9E-05 37.9 7.2 55 132-186 107-163 (297)
43 4ecm_A Glucose-1-phosphate thy 91.3 0.75 2.6E-05 36.5 7.7 78 103-185 70-150 (269)
44 2v0h_A Bifunctional protein GL 91.2 0.7 2.4E-05 39.5 8.0 88 79-183 34-123 (456)
45 3d5n_A Q97W15_sulso; NESG, SSR 91.2 0.14 4.6E-06 38.9 3.1 49 132-181 61-112 (197)
46 3pnn_A Conserved domain protei 91.0 0.63 2.1E-05 37.8 7.1 99 71-183 25-141 (303)
47 3f1c_A Putative 2-C-methyl-D-e 91.0 3.2 0.00011 32.3 11.1 94 79-186 33-135 (246)
48 1e5k_A Molybdopterin-guanine d 90.4 1.2 4.2E-05 33.6 7.9 49 132-180 65-116 (201)
49 1hm9_A GLMU, UDP-N-acetylgluco 90.2 0.89 3.1E-05 39.0 7.8 95 72-185 34-131 (468)
50 2vsh_A TARI, 2-C-methyl-D-eryt 90.2 1.8 6E-05 33.2 8.8 45 141-185 83-135 (236)
51 2qh5_A PMI, ALGA, mannose-6-ph 89.9 3.6 0.00012 33.2 10.8 95 72-180 31-128 (308)
52 2xwl_A 2-C-methyl-D-erythritol 89.3 5.2 0.00018 30.2 10.9 87 78-181 30-118 (223)
53 3rsb_A Adenosylcobinamide-phos 89.0 0.21 7.1E-06 37.6 2.5 90 79-183 28-119 (196)
54 2e3d_A UTP--glucose-1-phosphat 88.4 1.5 5.1E-05 35.3 7.5 55 132-186 103-164 (302)
55 1i52_A 4-diphosphocytidyl-2-C- 87.8 1.1 3.6E-05 34.7 6.0 75 104-185 52-128 (236)
56 2e8b_A Probable molybdopterin- 87.5 4.4 0.00015 30.4 9.2 46 133-178 72-120 (201)
57 3q80_A 2-C-methyl-D-erythritol 87.1 8.9 0.0003 29.6 12.8 90 77-184 34-128 (231)
58 2pa4_A UTP-glucose-1-phosphate 86.6 2.1 7.2E-05 34.9 7.4 54 132-185 106-162 (323)
59 1fxo_A Glucose-1-phosphate thy 85.4 3 0.0001 33.6 7.6 99 71-184 27-128 (293)
60 2dpw_A Hypothetical protein TT 84.0 4 0.00014 31.4 7.6 76 77-179 31-107 (232)
61 1vpa_A 2-C-methyl-D-erythritol 82.5 10 0.00036 28.7 9.4 93 77-185 40-136 (234)
62 1lvw_A Glucose-1-phosphate thy 81.2 6.6 0.00022 31.6 8.0 98 71-184 28-129 (295)
63 3tzt_A Glycosyl transferase fa 78.0 11 0.00038 30.0 8.3 104 67-179 5-122 (276)
64 2xme_A CTP-inositol-1-phosphat 77.9 3.9 0.00013 31.3 5.5 70 104-179 60-130 (232)
65 1w55_A ISPD/ISPF bifunctional 77.8 2.6 9E-05 35.3 4.7 70 103-184 47-117 (371)
66 1yp2_A Glucose-1-phosphate ade 76.2 29 0.001 29.3 11.1 100 72-185 46-163 (451)
67 2x65_A Mannose-1-phosphate gua 75.5 12 0.0004 30.7 8.0 96 71-180 27-124 (336)
68 3brk_X Glucose-1-phosphate ade 74.5 6.8 0.00023 33.0 6.5 100 72-185 38-153 (420)
69 1tzf_A Glucose-1-phosphate cyt 74.4 18 0.00063 27.8 8.7 46 139-185 103-149 (259)
70 2gak_A Beta-1,6-N-acetylglucos 73.9 8.2 0.00028 32.5 6.8 102 65-179 83-197 (391)
71 1mc3_A Glucose-1-phosphate thy 73.3 5.7 0.0002 32.0 5.5 97 71-183 28-128 (296)
72 2px7_A 2-C-methyl-D-erythritol 65.4 13 0.00046 28.4 6.0 52 132-185 83-135 (236)
73 2i5e_A Hypothetical protein MM 59.0 33 0.0011 25.6 7.1 45 132-179 66-111 (211)
74 1g9r_A Glycosyl transferase; a 58.0 9.8 0.00033 30.7 4.0 78 100-179 27-117 (311)
75 4evw_A Nucleoside-diphosphate- 56.2 35 0.0012 26.4 7.0 72 104-176 47-125 (255)
76 1jyk_A LICC protein, CTP:phosp 52.7 23 0.00077 27.5 5.3 65 104-177 72-138 (254)
77 3kcq_A Phosphoribosylglycinami 51.6 78 0.0027 24.1 8.4 68 103-177 35-103 (215)
78 3rht_A (gatase1)-like protein; 49.5 56 0.0019 25.7 7.0 82 104-192 5-87 (259)
79 2ggo_A 401AA long hypothetical 38.2 18 0.00061 30.0 2.7 86 72-179 26-113 (401)
80 1ll2_A Glycogenin-1; protein-s 30.4 1.3E+02 0.0044 24.4 6.6 18 155-172 93-110 (333)
81 1wd5_A Hypothetical protein TT 30.4 1.5E+02 0.0052 21.9 6.6 61 103-168 120-181 (208)
82 3u2u_A Glycogenin-1, GN-1, GN1 30.1 65 0.0022 25.3 4.6 18 155-172 94-111 (263)
83 3mvn_A UDP-N-acetylmuramate:L- 29.0 1.5E+02 0.0053 20.9 6.4 31 108-138 39-71 (163)
84 4grd_A N5-CAIR mutase, phospho 26.6 1.2E+02 0.0041 22.3 5.1 102 63-178 10-113 (173)
85 4ds3_A Phosphoribosylglycinami 26.5 2.1E+02 0.0071 21.6 7.5 93 68-176 8-106 (209)
86 2h4a_A YRAM (HI1655); perplasm 25.3 2E+02 0.0069 23.0 6.9 64 67-141 2-65 (325)
87 4e5v_A Putative THUA-like prot 24.6 1E+02 0.0035 24.4 4.8 38 155-192 57-94 (281)
88 3cgx_A Putative nucleotide-dip 24.5 2.4E+02 0.0081 21.6 10.4 50 133-183 77-130 (242)
89 2j0a_A Beta-1,3-N-acetylglucos 24.2 22 0.00074 28.4 0.7 29 155-183 92-120 (280)
90 4b4t_W RPN10, 26S proteasome r 24.1 1.1E+02 0.0039 24.1 5.0 45 141-185 84-136 (268)
91 3o85_A Ribosomal protein L7AE; 22.9 67 0.0023 22.0 3.0 70 104-182 49-119 (122)
92 4b4k_A N5-carboxyaminoimidazol 22.8 1.3E+02 0.0046 22.2 4.7 63 64-138 21-83 (181)
93 2xzm_U Ribosomal protein L7AE 22.6 1.9E+02 0.0065 19.8 6.8 72 104-180 42-123 (126)
94 3lor_A Thiol-disulfide isomera 21.3 2E+02 0.0067 19.4 11.8 82 101-183 62-155 (160)
95 1s4n_A Glycolipid 2-alpha-mann 20.2 1.1E+02 0.0037 25.2 4.2 67 64-139 25-92 (348)
96 3izc_H 60S ribosomal protein R 20.2 2E+02 0.0068 22.6 5.5 74 104-185 149-222 (256)
No 1
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.93 E-value=3.6e-25 Score=177.50 Aligned_cols=109 Identities=24% Similarity=0.387 Sum_probs=103.2
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk 144 (229)
.|+||||||+||+++.|++||+|+++ |+++++|||||||||+|+|.++++++.++++ ++++++. +|.|+
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~--------q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i~~-~n~G~ 72 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLA--------QTLSDIEIILIDDESPDNCPKICDDYAAQYP--NIKVIHK-KNAGL 72 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHT--------CSSSSEEEEEEECCCSSSHHHHHHHHHHHCS--SEEEEEC-CCCCH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHh--------CcCCCeEEEEEECCCCcCHHHHHHHHHhhCC--CEEEEEC-CCCCh
Confidence 56799999999999999999999998 7788999999999999999999999999988 8999974 69999
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHh
Q 027065 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAV 184 (229)
Q Consensus 145 ~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~ 184 (229)
+.|+|.|++.|+||||+|+|+|+.+.|++|+++++.+++.
T Consensus 73 ~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 73 GMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKY 112 (240)
T ss_dssp HHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999874
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.93 E-value=3e-25 Score=179.64 Aligned_cols=121 Identities=19% Similarity=0.250 Sum_probs=110.8
Q ss_pred ceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC------
Q 027065 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG------ 139 (229)
Q Consensus 66 p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~------ 139 (229)
|+||||||+||+++.|++||+|+.+ |+++++|||||||||+|+|.++++++.. .+ +++++..+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~--------q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~--~i~~i~~~~~~~~~ 69 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILS--------QTFSDFELFIMDDNSNEETLNVIRPFLN-DN--RVRFYQSDISGVKE 69 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHT--------CSCCCEEEEEEECSCCHHHHHHHGGGGG-ST--TEEEEECCCCSHHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHh--------ccCCceEEEEEECCCCchHHHHHHHHhh-cC--CEEEEecccccccc
Confidence 5799999999999999999999998 7888999999999999999999998866 44 89999998
Q ss_pred --CCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeeccceee
Q 027065 140 --RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTV 197 (229)
Q Consensus 140 --~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 197 (229)
+|.|++.|+|.|++.|+||||+|+|+|+.+.|++|+.+++.++++++..++++.....
T Consensus 70 ~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 129 (255)
T 1qg8_A 70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY 129 (255)
T ss_dssp HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE
T ss_pred cccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE
Confidence 8999999999999999999999999999999999999999999988877777765443
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.89 E-value=1.9e-22 Score=177.49 Aligned_cols=119 Identities=26% Similarity=0.279 Sum_probs=107.6
Q ss_pred CCCceEEEEEeecCCC-CChHHHHHHHHHHHHHhhhhcCCCc--eEEEEEECCCCcc-hHHHHHHHHHHcCCCcEEEEEc
Q 027065 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRIILL 138 (229)
Q Consensus 63 ~~~p~vsviip~~ne~-~~l~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~-t~~~~~~~~~~~~~~~i~vi~~ 138 (229)
...|+||||||+||++ +.|.++|+|+++ |++++ +|||||||||+|+ |.++++++.++++ .++++++.
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~--------q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~-~~v~vi~~ 96 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVIN--------RSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK-VPVHVIRM 96 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHH--------SSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS-SCEEEEEC
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHh--------cCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC-CcEEEEEC
Confidence 4678999999999999 999999999999 56655 6999999999995 9999999988765 26999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCccee
Q 027065 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYN 190 (229)
Q Consensus 139 ~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~ 190 (229)
++|.|++.|+|.|++.|+||||+|+|+|+.+.|++|+.+++.+++++..+++
T Consensus 97 ~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~ 148 (472)
T 1xhb_A 97 EQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC 148 (472)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE
T ss_pred CCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999999999999999999999999999999988766543
No 4
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.88 E-value=2.1e-23 Score=179.10 Aligned_cols=125 Identities=23% Similarity=0.321 Sum_probs=103.3
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk 144 (229)
.|+||||||+|||++.|.+||+++.+++. +...++|||||||||+|+|.++++++..+.....++++..+.|.|+
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~-----~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNE-----RAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGK 167 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHH-----HSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHh-----cCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCH
Confidence 46799999999999999999999987554 2345799999999999999999988743211011223345679999
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCC-CChhhHHHHHHHHHHhCCcceeeccc
Q 027065 145 GEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDS 194 (229)
Q Consensus 145 ~~a~n~gl~~a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~~~~~~~~~~ 194 (229)
+.|+|.|++.|+||||+|+|+|+. ++|++|.++++.+.++++..++.|..
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 999999999999999999999999 89999999999998887666666644
No 5
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.88 E-value=2.5e-22 Score=169.17 Aligned_cols=123 Identities=21% Similarity=0.267 Sum_probs=103.0
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCC-ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEE-cCCC
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSF-TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL-LGRN 141 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~-~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~-~~~~ 141 (229)
..|+||||||+||+++.|.++|+|+.+ |.++ .+|||||||||+|+|.++++++..+.. ..++++. .++|
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~--------q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~n 116 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISP--------LVDGLVDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPIR 116 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGG--------GBTTTBSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHH--------hhCCCCcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCCC
Confidence 457899999999999999999999998 5555 599999999999999999988743311 0222332 6789
Q ss_pred CCHHHHHHHHHHhcCCCEEEEEcCCCC-CChhhHHHHHHHHHHhCCcceeeccce
Q 027065 142 HGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDSV 195 (229)
Q Consensus 142 ~gk~~a~n~gl~~a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~ 195 (229)
.|++.|+|.|++.|+||||+|+|+|+. +.|++|+++++.+.++++..+++|...
T Consensus 117 ~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~ 171 (329)
T 3ckj_A 117 PGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYR 171 (329)
T ss_dssp CSHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEE
T ss_pred CCHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEec
Confidence 999999999999999999999999999 899999999999888777777666543
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.88 E-value=5.8e-22 Score=179.92 Aligned_cols=124 Identities=25% Similarity=0.290 Sum_probs=113.2
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~g 143 (229)
..|.||||||+||+++.|.+||+|+++ |+++++|||||||||+|+|.++++++.++++ +++++. ++|.|
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~--------q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~--~i~~~~-~~n~G 441 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALN--------QTITDLEVCICDDGSTDDTLRILQEHYANHP--RVRFIS-QKNKG 441 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHS--------SSCCSEEEEEEEESCSSSHHHHHHHHHTTCT--TEEEEE-ECCCC
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHh--------CcCCCeEEEEEECcCChhHHHHHHHHHhhCC--cEEEEe-CCCCC
Confidence 467899999999999999999999998 7888999999999999999999999988777 899987 56999
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeeccceeec
Q 027065 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVD 198 (229)
Q Consensus 144 k~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 198 (229)
++.|+|.|++.|+||||+|+|+|+.+.|++|+.+++.+.++++.+++++.....+
T Consensus 442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~ 496 (625)
T 2z86_A 442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNID 496 (625)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEEC
Confidence 9999999999999999999999999999999999999998888887777654443
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.88 E-value=1.8e-22 Score=181.60 Aligned_cols=117 Identities=23% Similarity=0.277 Sum_probs=107.0
Q ss_pred CCCceEEEEEeecCCC-CChHHHHHHHHHHHHHhhhhcCCCc--eEEEEEECCCCcch-HHHHHHHHHHcCCCcEEEEEc
Q 027065 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGT-KRVAFDFVRKYTVDNVRIILL 138 (229)
Q Consensus 63 ~~~p~vsviip~~ne~-~~l~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~t-~~~~~~~~~~~~~~~i~vi~~ 138 (229)
...|+||||||+||++ +.|.+||+|+++ |++++ +|||||||||+|+| .++++++.++++ ++++++.
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~--------qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~ 178 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLN--------RSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRT 178 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHH--------HSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEEC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHh--------cCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEEC
Confidence 4568899999999999 999999999999 45545 49999999999999 899999988887 8999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcce
Q 027065 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEY 189 (229)
Q Consensus 139 ~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~ 189 (229)
++|.|++.|+|.|++.|+||||+|+|+|+.+.|++|+.+++.+.++++.++
T Consensus 179 ~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv 229 (570)
T 2d7i_A 179 KKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIV 229 (570)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEE
T ss_pred CCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999999999999999999999998776543
No 8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.87 E-value=2.5e-21 Score=180.15 Aligned_cols=123 Identities=20% Similarity=0.221 Sum_probs=102.6
Q ss_pred CCCCceEEEEEeecCCCCCh-HHHHHHHHHHHHHhhhhcCCCc--eEEEEEECCCCcchH---------------HHHHH
Q 027065 62 DPAEKYISLIIPAFNEEHRL-PGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGTK---------------RVAFD 123 (229)
Q Consensus 62 ~~~~p~vsviip~~ne~~~l-~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~t~---------------~~~~~ 123 (229)
++..|+|||+||+|||++.+ ++||+|+.+ |++++ +||+||||||+|+|. +.+++
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~--------q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~ 207 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKN--------MIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQ 207 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHT--------SSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHh--------ccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHH
Confidence 34568899999999999665 889999988 56655 999999999999993 34555
Q ss_pred HHHHcCCCcEEEEEcCCC-CCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeeccce
Q 027065 124 FVRKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSV 195 (229)
Q Consensus 124 ~~~~~~~~~i~vi~~~~~-~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 195 (229)
+.++++ ++++..+++ .||++|+|.|++.+++|||+++|+|+.++|++++++++.++++++.+.+.+...
T Consensus 208 ~~~~~~---v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~ 277 (802)
T 4hg6_A 208 LCRELG---VVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHF 277 (802)
T ss_dssp HHHHHT---CEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCC
T ss_pred HHHhcC---cEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEE
Confidence 555554 777777665 789999999999999999999999999999999999999988888776655433
No 9
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.85 E-value=2.7e-21 Score=171.39 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=99.2
Q ss_pred CCCceEEEEEeecCCCC-ChHHHHHHHHHHHHHhhhhcCCCc--eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC
Q 027065 63 PAEKYISLIIPAFNEEH-RLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG 139 (229)
Q Consensus 63 ~~~p~vsviip~~ne~~-~l~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~ 139 (229)
...|.||||||+||++. .|.++|+|+++ |++++ +|||||||||+|+|.+. ..++++ ++++++.+
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~--------q~~~~~~~EIIvVDDgS~D~t~~~---~~~~~~--~v~vi~~~ 129 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLK--------KSPPHLIKEIILVDDYSNDPEDGA---LLGKIE--KVRVLRND 129 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHH--------HSCGGGEEEEEEEECSCSCTHHHH---GGGGBT--TEEEEECS
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHh--------hCchhhceeEEEEECCCCchHHHH---HHhcCC--CEEEEECC
Confidence 45789999999999997 99999999999 44444 69999999999999643 235566 89999999
Q ss_pred CCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCc
Q 027065 140 RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRK 187 (229)
Q Consensus 140 ~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~ 187 (229)
+|.|++.|+|.|++.|+||||+|+|+|+.+.|++|+.+++.+.+++..
T Consensus 130 ~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 130 RREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp SCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 999999999999999999999999999999999999999999987764
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.84 E-value=8.8e-23 Score=188.47 Aligned_cols=115 Identities=20% Similarity=0.379 Sum_probs=0.0
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk 144 (229)
+|+||||||+||+++.|++||+|+++ |+++++|||||||||+|+|.++++++.++++ ++++++..++|.|.
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~--------Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~ 71 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQ--------QRTQDFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGH 71 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHh--------CCCCCeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCH
Confidence 46799999999999999999999999 5667899999999999999999999988754 37999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcce
Q 027065 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEY 189 (229)
Q Consensus 145 ~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~ 189 (229)
++|+|.|++.|+||||+|+|+|+.+.|++|+.+++.++ ..+.++
T Consensus 72 ~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~ 115 (729)
T 3l7i_A 72 AHARNIALEEVETPYFMFLDADDELASYAITFYLEKFN-NTDGLI 115 (729)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEE
Confidence 99999999999999999999999999999999999998 444443
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.80 E-value=1.2e-19 Score=165.18 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=102.4
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcc--hHHHHHHHHHHcCCCcEEEEEcCC
Q 027065 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDG--TKRVAFDFVRKYTVDNVRIILLGR 140 (229)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~--t~~~~~~~~~~~~~~~i~vi~~~~ 140 (229)
+..|+||||||+||+++.+.+||+|+.+|.+.. ...+|||||||||+|. +....+......+ +++++.++
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~-----~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--~I~vI~~~- 248 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVD-----QVIGAVIVPDQGERKVRDHPDFPAAAARLGS--RLSIHDQP- 248 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHH-----TTEEEEEEEECSSSCGGGSTTHHHHHHHHGG--GEEEEECC-
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCcccc-----CCCCEEEEEECcCCCccchHHHHHHHHhcCC--CEEEEECC-
Confidence 346789999999999999999999999854310 1467999999999984 2333333333344 89999988
Q ss_pred CCCHHHHHHHHHHhc----CCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeeccceeec
Q 027065 141 NHGKGEAIRKGMLHS----RGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVD 198 (229)
Q Consensus 141 ~~gk~~a~n~gl~~a----~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 198 (229)
|.|.++|+|.|++.| .+|||+|+|+|+.+.|++|+++++.++.+++..++.+.....+
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~ 310 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQ 310 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETT
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCC
Confidence 999999999999998 4689999999999999999999999999887766555444443
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.80 E-value=4.6e-19 Score=160.85 Aligned_cols=118 Identities=19% Similarity=0.246 Sum_probs=101.5
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCC-CceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-C
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKS-FTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-N 141 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~-~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-~ 141 (229)
..|.||||||+||+++.+.++|+++.+ |.+ .++|||||||||+|+|.++++++.+. + +++++..+. +
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~--------q~~~~~~eiivvDd~s~d~t~~~~~~~~~~-~--~i~~i~~~~~~ 159 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCN--------QKTIYDYEVIVADDGSKENIEEIVREFESL-L--NIKYVRQKDYG 159 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHT--------CCCSSCEEEEEEEESCSSCHHHHHHTTTTT-S--CEEEEEECCCS
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHh--------hccCCCeEEEEEeCCCchhHHHHHHHhhhc-C--CeEEEEeCCCC
Confidence 357899999999999999999999988 543 48999999999999999999887443 2 588888764 3
Q ss_pred CCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeec
Q 027065 142 HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHG 192 (229)
Q Consensus 142 ~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~ 192 (229)
.|+++|+|.|++.|+||||+|+|+|+.+.|++|+.+++.+.+++..++..+
T Consensus 160 ~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~ 210 (625)
T 2z86_A 160 YQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGP 210 (625)
T ss_dssp CCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECC
T ss_pred cchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEe
Confidence 469999999999999999999999999999999999999998776655433
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.70 E-value=1.1e-16 Score=137.30 Aligned_cols=113 Identities=15% Similarity=0.047 Sum_probs=84.2
Q ss_pred EEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcC-CCcEEE--EEcC--C--C
Q 027065 69 SLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT-VDNVRI--ILLG--R--N 141 (229)
Q Consensus 69 sviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~~~i~v--i~~~--~--~ 141 (229)
|+||+.+|++ .+..+++++.... ..+.+|||||||||+|+|.++++++..+.+ ..++++ +... . |
T Consensus 2 slVIiP~~eE-~I~~vl~~l~~~~-------~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n 73 (397)
T 2bo4_A 2 SLVVFPFKHE-HPEVLLHNVRVAA-------AHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLR 73 (397)
T ss_dssp CEEEEECCSS-CHHHHHHHHHHHH-------HSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSS
T ss_pred cEEEEeCCcc-CHHHHHHHHHHhc-------cCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCC
Confidence 4455555554 5888888775421 134689999999999999999996655443 112333 2222 3 8
Q ss_pred CCHHHHHHHHH----HhcCCCEEEEEcCCCC-CChhhHHHHHHHHHHhCCcce
Q 027065 142 HGKGEAIRKGM----LHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEY 189 (229)
Q Consensus 142 ~gk~~a~n~gl----~~a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~~~~~ 189 (229)
.||+.|++.|+ +.++||+|+++|+|.. .+|+++.+|++.+.++-+.+.
T Consensus 74 ~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~ 126 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVR 126 (397)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 99999999999 8899999999999996 899999999999976544443
No 14
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.65 E-value=1.3e-15 Score=126.22 Aligned_cols=100 Identities=17% Similarity=0.207 Sum_probs=80.4
Q ss_pred ceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcch---HHHHHHHHHH-cCCCcEEEEEcC--
Q 027065 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT---KRVAFDFVRK-YTVDNVRIILLG-- 139 (229)
Q Consensus 66 p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t---~~~~~~~~~~-~~~~~i~vi~~~-- 139 (229)
.++|||||+||++. .+|+++++ |.+.++|||+|||||+|.+ .++++++++. .. ++.+++..
T Consensus 53 ~klSIVVPvYNEe~---~lLesVl~--------qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~--ri~viHQkn~ 119 (391)
T 2wvl_A 53 EQTAIVVPTRNERL---KLLEGVLS--------GIPHEALILVASNSSPDRFQMERDLLEEFAHLTER--PALIFHQKDP 119 (391)
T ss_dssp TTEEEEEEESSCCH---HHHHHHHH--------TSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTC--CEEEEETTCH
T ss_pred hceEEEEeccCcHH---HHHHHHHh--------cCCCCceEEEEECCCCCChHhHHHHHHHHHhhccc--ceEEEeccCh
Confidence 57999999999995 57999998 6777999999999999999 5788899874 44 78888742
Q ss_pred --------------------CCCCHHHHHHHHHHhc---CCCEEEEEcCCCCCChhhHHHHH
Q 027065 140 --------------------RNHGKGEAIRKGMLHS---RGELLLMLDADGATKVTDLEKLE 178 (229)
Q Consensus 140 --------------------~~~gk~~a~n~gl~~a---~~d~v~~lD~D~~~~~~~l~~l~ 178 (229)
.+.||+.++-.|+..| .++||.|+|+|++++.+..+.+.
T Consensus 120 gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk 181 (391)
T 2wvl_A 120 ALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVR 181 (391)
T ss_dssp HHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHH
T ss_pred HHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHH
Confidence 2356666666788887 79999999999999766655543
No 15
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.60 E-value=8.2e-16 Score=124.35 Aligned_cols=94 Identities=11% Similarity=0.090 Sum_probs=77.7
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~g 143 (229)
..+.+||| |+||+++.+++||+|+.+++.. |.+ +|||||||+|+|. .|
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~----q~~--~EiIVVDn~s~d~-------------------------~g 61 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFT----PDK--AEFLAADNREGNQ-------------------------FH 61 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCC----TTT--EEEEEEECTTSCS-------------------------CC
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccC----CCc--EEEEEEECCCCCc-------------------------cc
Confidence 34679975 6799999999999988765432 233 9999999999872 35
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHh----CCcce
Q 027065 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAV----GRKEY 189 (229)
Q Consensus 144 k~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~----~~~~~ 189 (229)
.+.|+|.|++.|+|||++|+|+|+.+++++|+.+++.++++ ++.++
T Consensus 62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~ 111 (249)
T 2nxv_A 62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLV 111 (249)
T ss_dssp TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeE
Confidence 67899999999999999999999999999999999999873 65443
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.55 E-value=3.8e-14 Score=120.32 Aligned_cols=104 Identities=20% Similarity=0.329 Sum_probs=82.1
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcch------HHHHHHHHHHcCCCcEEEEEcCC
Q 027065 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT------KRVAFDFVRKYTVDNVRIILLGR 140 (229)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t------~~~~~~~~~~~~~~~i~vi~~~~ 140 (229)
++|||||+|||+.. .+..++..+ ...+|||+|||||+|+| .++++++.+..+ ....+++...
T Consensus 52 ~iSVVIP~yNEE~~---lI~~vL~~i--------~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~-~~~~Vl~~~~ 119 (394)
T 2zu9_A 52 KMAVIVPMKNEKLH---LVDGVLKAI--------PHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTH-SKIIMIHQKD 119 (394)
T ss_dssp TEEEEEEESSCCHH---HHHHHHHHS--------CTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHC-CCEEEEETTC
T ss_pred CEEEEEecCcccHH---HHHHHHHcC--------CCCcEEEEEECcCcccccchhhHHHHHHHHhhccc-cceEEEecCC
Confidence 59999999999943 366666532 23689999999998877 788888877655 2566666543
Q ss_pred ----------------------CCCHHHHHHHHHHhc---CCCEEEEEcCCCCCChhhHHHHHHHHHH
Q 027065 141 ----------------------NHGKGEAIRKGMLHS---RGELLLMLDADGATKVTDLEKLESQIHA 183 (229)
Q Consensus 141 ----------------------~~gk~~a~n~gl~~a---~~d~v~~lD~D~~~~~~~l~~l~~~~~~ 183 (229)
+.||+.|+-.|+..| ++|+|+++|+|. ..|..+.++++.+..
T Consensus 120 p~v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~a 186 (394)
T 2zu9_A 120 PGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAA 186 (394)
T ss_dssp HHHHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHH
T ss_pred cchhHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhh
Confidence 249999999999999 999999999999 678888888877765
No 17
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.47 E-value=7.2e-14 Score=115.17 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=67.5
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~g 143 (229)
..|+||||||+||+++.|.++|+|+...+. |.+.++|||||||++++ ..+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~-----q~~~~~EIiVVdds~d~-------------------------~f~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQ-----RQQLDYGIYVINQAGDT-------------------------IFN 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHH-----HTTCEEEEEEEEECSSS-------------------------CCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHH-----HhcCCceEEEEEeCCCC-------------------------ccc
Confidence 357899999999999999999999995333 35678999999994331 236
Q ss_pred HHHHHHHHH----HhcCCCEEEEEcCCCCCChhh
Q 027065 144 KGEAIRKGM----LHSRGELLLMLDADGATKVTD 173 (229)
Q Consensus 144 k~~a~n~gl----~~a~~d~v~~lD~D~~~~~~~ 173 (229)
++.++|.|+ +.|+|||++|+|+|+.+.+++
T Consensus 113 ~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred hhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 788999999 899999999999999999996
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.20 E-value=6.6e-11 Score=99.45 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=83.1
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEE---------
Q 027065 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL--------- 137 (229)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~--------- 137 (229)
.++|+|++||..+ +.++|+++.++- ....+++|||.|||+.+++.++++++.. .+..+.
T Consensus 3 ~~pViI~~yNRp~-l~~~L~sL~~~~------p~~~~~~iivsdDgs~~~~~~vi~~~~~-----~I~~~~~~d~~~~~~ 70 (343)
T 1fo8_A 3 VIPILVIACDRST-VRRCLDKLLHYR------PSAELFPIIVSQDCGHEETAQVIASYGS-----AVTHIRQPDLSNIAV 70 (343)
T ss_dssp CCCEEEEESSCTT-HHHHHHHHHHHC------SCTTTSCEEEEECTTCHHHHHHHHTTGG-----GSEEEECSCCCCCCC
T ss_pred cccEEEEECCcHH-HHHHHHHHHhcC------CCcCCcEEEEEECCCCHHHHHHHHHcCC-----ceEEEEcCCcccccc
Confidence 4789999999998 999999999831 1234689999999999999998887642 233332
Q ss_pred cCCCCCHH----------HHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHH---HHhCCcce
Q 027065 138 LGRNHGKG----------EAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQI---HAVGRKEY 189 (229)
Q Consensus 138 ~~~~~gk~----------~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~---~~~~~~~~ 189 (229)
.++|.|.. .++|.+++.+++++++++|+|+.++|+++..+.+.+ ++.+...+
T Consensus 71 ~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ 135 (343)
T 1fo8_A 71 QPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWC 135 (343)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEE
T ss_pred chhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEE
Confidence 23454532 577777777789999999999999999997666666 44444433
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=96.77 E-value=0.0042 Score=50.12 Aligned_cols=78 Identities=13% Similarity=0.211 Sum_probs=62.8
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk 144 (229)
.-+|+||||.+|.++.|...|..+...+.+|. ..+.|+||+.. | ....++
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~-----l~y~I~VieQ~--~-----------------------~~~FNR 99 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQG-----VAHHIFVLNQV--D-----------------------RFRFNR 99 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT-----CEEEEEEEEEC--S-----------------------SSCCCH
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcC-----CceEEEEEecC--C-----------------------CCccch
Confidence 35799999999999888888888888887753 36888888763 1 135778
Q ss_pred HHHHHHHHHhcC--CCEEEEEcCCCCCChh
Q 027065 145 GEAIRKGMLHSR--GELLLMLDADGATKVT 172 (229)
Q Consensus 145 ~~a~n~gl~~a~--~d~v~~lD~D~~~~~~ 172 (229)
+..+|.|+..|. .|+++|-|.|-.+..+
T Consensus 100 a~LlNvGf~ea~~~~d~~ifHDVDLlP~dd 129 (287)
T 3lw6_A 100 ASLINVGFQFASDVYDYIAMHDVDLLPLND 129 (287)
T ss_dssp HHHHHHHHHHSCTTCCEEEEECTTEEECCT
T ss_pred hheecccHHHHhccCCEEEEecccccccCC
Confidence 899999999885 6999999999887644
No 20
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=96.76 E-value=0.014 Score=46.95 Aligned_cols=101 Identities=13% Similarity=0.094 Sum_probs=64.6
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCC--CcchHHHHHHHHHHcCCCcEEEEEc--
Q 027065 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILL-- 138 (229)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~vi~~-- 138 (229)
...|.|-||.|+|...... .-|..+.+.+.. - +++..|||+|+. ++.+.+++++. ++.+.+.
T Consensus 18 ~~~p~IivVTPTy~R~~Q~-a~LtRLa~TL~~-----V-p~L~WIVVEd~~~~t~~va~lL~rs-------Gl~y~HL~~ 83 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQK-AELVRLSQTLSL-----V-PRLHWLLVEDAEGPTPLVSGLLAAS-------GLLFTHLVV 83 (281)
T ss_dssp ---CEEEEEEEECCSTTHH-HHHHHHHHHHTT-----S-SSEEEEEEESSSSCCHHHHHHHHHH-------CSEEEEEEC
T ss_pred CCCCeEEEEeCCCCCcchh-HHHHHHHHHHhc-----C-CceEEEEEcCCCCCCHHHHHHHHHc-------CCceEEecc
Confidence 4568899999999986433 224444443332 2 389999999974 56677777765 3333332
Q ss_pred C--CCC------------CHHHHHHHHHHhcC-----------------CCEEEEEcCCCCCChhhHHHH
Q 027065 139 G--RNH------------GKGEAIRKGMLHSR-----------------GELLLMLDADGATKVTDLEKL 177 (229)
Q Consensus 139 ~--~~~------------gk~~a~n~gl~~a~-----------------~d~v~~lD~D~~~~~~~l~~l 177 (229)
+ .+. -....+|.|++..+ .-+|.|.|+|..++-+.+++|
T Consensus 84 ~~p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 84 LTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp CCC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred CCCccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 2 111 11467999997655 257899999999998877763
No 21
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=96.71 E-value=0.017 Score=45.80 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=66.6
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCC--CcchHHHHHHHHHHcCCCcEEEEEc--CC
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILL--GR 140 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~vi~~--~~ 140 (229)
.|.|-+|.|+|...... .-|..+.+.+. + -+++..|||+|+. ++.+.+++++. ++.+.+. +.
T Consensus 2 ~p~I~vVTPTy~R~~Q~-a~LtRLa~TL~-----~-Vp~L~WIVVEd~~~~t~~va~lL~~s-------gl~y~HL~~~~ 67 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQK-AELTRMANTLL-----H-VPNLHWLVVEDAPRRTPLTARLLRDT-------GLNYTHLHVET 67 (253)
T ss_dssp CCEEEEEEEECCSTTHH-HHHHHHHHHHT-----T-SSSEEEEEEESSSSCCHHHHHHHHHH-------CCEEEEEECCC
T ss_pred CCEEEEEeCCCCccchh-HHHHHHhhhhc-----c-CCceEEEEEeCCCCCCHHHHHHHHHc-------CCceEEeecCC
Confidence 47799999999986433 23444544442 1 2489999999965 57777777766 3433332 21
Q ss_pred --C------------CCHHHHHHHHHHhcC---------CCEEEEEcCCCCCChhhHHHHH
Q 027065 141 --N------------HGKGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEKLE 178 (229)
Q Consensus 141 --~------------~gk~~a~n~gl~~a~---------~d~v~~lD~D~~~~~~~l~~l~ 178 (229)
+ .-....+|.|++..+ .-+|.|.|+|...+-+.+++|-
T Consensus 68 p~~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 68 PRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp CHHHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred CccccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 0 112467899997642 3688999999999988777743
No 22
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=96.28 E-value=0.033 Score=44.03 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=62.8
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCc--chHHHHHHHHHHcCCCcEEEEEcC--C
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSD--GTKRVAFDFVRKYTVDNVRIILLG--R 140 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d--~t~~~~~~~~~~~~~~~i~vi~~~--~ 140 (229)
.|.|-||.|+|...... .-|.++.+.+.. - +++..|||+|+..- .+.+++++. .- ..+.+..+ +
T Consensus 2 ~p~I~vVTPTy~R~~Q~-a~LtRLa~TL~~-----V-p~l~WIVVEd~~~~~~~v~~lL~~s----gl-~y~HL~~~~~~ 69 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQK-AELTRLANTFRQ-----V-AQLHWILVEDAAARSELVSRFLARA----GL-PSTHLHVPTPR 69 (246)
T ss_dssp CCCEEEEEEECCSTTHH-HHHHHHHHHHTT-----S-TTEEEEEEESSSSCCHHHHHHHHHS----CS-CEEEEECCCCC
T ss_pred CCEEEEEeCCCCccchh-HHHHHHHHHHhc-----C-CceEEEEEcCCCCCCHHHHHHHHHc----CC-ceEEEecCCcc
Confidence 46799999999986433 334455554432 2 35999999997743 244555543 21 12223222 1
Q ss_pred CC------CHHHHHHHHHHhcC---------CCEEEEEcCCCCCChhhHHHH
Q 027065 141 NH------GKGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEKL 177 (229)
Q Consensus 141 ~~------gk~~a~n~gl~~a~---------~d~v~~lD~D~~~~~~~l~~l 177 (229)
+. .....+|.|++..+ .-+|.|.|+|...+-+.+++|
T Consensus 70 ~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 70 RYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp C----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred ccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 11 12478999996531 478999999999998877774
No 23
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=95.95 E-value=0.12 Score=41.32 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=62.3
Q ss_pred ceEEEEEeecCCCCChH----------HHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEE
Q 027065 66 KYISLIIPAFNEEHRLP----------GALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRI 135 (229)
Q Consensus 66 p~vsviip~~ne~~~l~----------~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~v 135 (229)
+++.+||++......+. -.|+..++.+.. .. --+|+|+.| .+.. +++..++. +++
T Consensus 17 M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~-----~~-i~~IvV~t~--~~~i----~~~~~~~g---~~v 81 (264)
T 3k8d_A 17 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARE-----SG-AERIIVATD--HEDV----ARAVEAAG---GEV 81 (264)
T ss_dssp -CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHH-----TT-CSEEEEEES--CHHH----HHHHHHTT---CEE
T ss_pred CceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHh-----CC-CCEEEEECC--HHHH----HHHHHHcC---CEE
Confidence 35778888877666554 133333333332 11 357888764 2323 33334443 555
Q ss_pred EEc-C-CCCCHHHHHHHHHHhc---CCCEEEEEcCCCC-CChhhHHHHHHHHHHhC
Q 027065 136 ILL-G-RNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (229)
Q Consensus 136 i~~-~-~~~gk~~a~n~gl~~a---~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~ 185 (229)
+.. + ...|.+. +..+++.. ..|+++++++|.. ++++.+.++++.+.+..
T Consensus 82 ~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~ 136 (264)
T 3k8d_A 82 CMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ 136 (264)
T ss_dssp EECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSS
T ss_pred EEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 542 2 2345443 55566554 5799999999995 58999999999997643
No 24
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=95.85 E-value=0.33 Score=38.30 Aligned_cols=72 Identities=10% Similarity=0.183 Sum_probs=46.6
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEc--CCCCCHHHHHHHHHHhc---CCCEEEEEcCCC-CCChhhHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILL--GRNHGKGEAIRKGMLHS---RGELLLMLDADG-ATKVTDLEKL 177 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~--~~~~gk~~a~n~gl~~a---~~d~v~~lD~D~-~~~~~~l~~l 177 (229)
-+|+|+.+ .+. ++++..++. ++++.. +...|.++ ...+++.. ..+.++++++|. .++++.+.++
T Consensus 43 ~~ivVv~~--~~~----i~~~~~~~g---~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l 112 (252)
T 3oam_A 43 DRVIIATD--DER----VEQAVQAFG---GVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQV 112 (252)
T ss_dssp SEEEEEES--CHH----HHHHHHHTT---CEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHH
T ss_pred CeEEEECC--HHH----HHHHHHHcC---CEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHH
Confidence 57888774 232 333334433 555543 23455555 44555554 579999999999 4689999999
Q ss_pred HHHHHHhC
Q 027065 178 ESQIHAVG 185 (229)
Q Consensus 178 ~~~~~~~~ 185 (229)
++.+.+..
T Consensus 113 ~~~~~~~~ 120 (252)
T 3oam_A 113 ADNLAACS 120 (252)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhcC
Confidence 99987653
No 25
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=95.40 E-value=0.35 Score=37.41 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=49.5
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-----CCCCHHHHHHHHHHhc-CCCEEEEEcCCCCC-ChhhHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-----RNHGKGEAIRKGMLHS-RGELLLMLDADGAT-KVTDLEK 176 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-----~~~gk~~a~n~gl~~a-~~d~v~~lD~D~~~-~~~~l~~ 176 (229)
-+|+|+-+ .+.. +++..++ ++.++..+ ...|...++..|++.. ..|+++++++|..+ +++.+.+
T Consensus 45 ~~ivv~~~--~~~i----~~~~~~~---g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~ 115 (229)
T 1qwj_A 45 QSVWVSTD--HDEI----ENVAKQF---GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQK 115 (229)
T ss_dssp SEEEEEES--CHHH----HHHHHHT---TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHH
T ss_pred CEEEEECC--hHHH----HHHHHHc---CCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHH
Confidence 47777764 2323 3333333 35666654 2345557788888877 57999999999964 8899999
Q ss_pred HHHHHHHhC
Q 027065 177 LESQIHAVG 185 (229)
Q Consensus 177 l~~~~~~~~ 185 (229)
+++.+.+.+
T Consensus 116 l~~~~~~~~ 124 (229)
T 1qwj_A 116 VAEMIREEG 124 (229)
T ss_dssp HHHHHHSSC
T ss_pred HHHHHHhCC
Confidence 999887654
No 26
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=95.18 E-value=0.019 Score=46.67 Aligned_cols=116 Identities=15% Similarity=0.026 Sum_probs=73.5
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchH-HHHHHHHHHcCCCcEEEEEcCCCCC
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK-RVAFDFVRKYTVDNVRIILLGRNHG 143 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~-~~~~~~~~~~~~~~i~vi~~~~~~g 143 (229)
...+|++|-+|+..+ .|..+++... ....--||+||=++...... +....+. .. ...++++..+.|.
T Consensus 27 ~~~FTvvi~ty~R~~----~L~~lv~~~~-----~~~~v~~IvVvWn~~~~~pp~~~~~~~~-~~-~vpv~v~~~~~ns- 94 (293)
T 1omz_A 27 LDSFTLIMQTYNRTD----LLLRLLNHYQ-----AVPSLHKVIVVWNNVGEKGPEELWNSLG-PH-PIPVIFKPQTANK- 94 (293)
T ss_dssp TTCEEEEEEESSCHH----HHHHHHHHHT-----TSTTEEEEEEEECCTTCCCTHHHHHHTC-CC-SSCEEEEECSSCC-
T ss_pred CCceEEEEEeecccH----HHHHHHHHHh-----cCCCCCeEEEEeCCCCCCCChhhccccC-CC-CccEEEEeCCCCc-
Confidence 446999999999643 3344444332 23346788888777643332 2222211 00 1358887766551
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeecc
Q 027065 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGD 193 (229)
Q Consensus 144 k~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~ 193 (229)
-.++-.-....+.+-|+.+|+|..++.+.|+......++.|+..+++-.
T Consensus 95 -LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVGf~~ 143 (293)
T 1omz_A 95 -MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVP 143 (293)
T ss_dssp -GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCE
T ss_pred -hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceecCch
Confidence 1111112344578999999999999999999999999999987666543
No 27
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.17 E-value=0.77 Score=36.44 Aligned_cols=74 Identities=15% Similarity=0.266 Sum_probs=47.8
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC--CCCCHHHHHHHHHHhc---CCCEEEEEcCCCC-CChhhHHH
Q 027065 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG--RNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEK 176 (229)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~--~~~gk~~a~n~gl~~a---~~d~v~~lD~D~~-~~~~~l~~ 176 (229)
--+|+|+-| ++. ++++..+++ ++++... ...|.+. +..|++.. ..|+++++++|.. ++++.+.+
T Consensus 49 i~~VvVvt~--~~~----i~~~~~~~g---~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~ 118 (256)
T 3tqd_A 49 AEEVVIATD--DKR----IRQVAEDFG---AVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRK 118 (256)
T ss_dssp CSEEEEEES--CHH----HHHHHHHTT---CEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHH
T ss_pred CCEEEEECC--HHH----HHHHHHHcC---CeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHH
Confidence 357887764 233 333333443 5555432 2345444 66677765 5799999999994 68999999
Q ss_pred HHHHHHHhCC
Q 027065 177 LESQIHAVGR 186 (229)
Q Consensus 177 l~~~~~~~~~ 186 (229)
+++.+.+.++
T Consensus 119 li~~~~~~~~ 128 (256)
T 3tqd_A 119 LAEDLDEHDN 128 (256)
T ss_dssp HHHHHHHCC-
T ss_pred HHHHHHhCCC
Confidence 9999987543
No 28
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=94.62 E-value=0.08 Score=39.79 Aligned_cols=85 Identities=11% Similarity=0.150 Sum_probs=54.0
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCCHHHHHHHHHHhc--
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHS-- 155 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~gk~~a~n~gl~~a-- 155 (229)
..++.+++.+.+ . .--+|+|+.+... +.++++...+ .++++..+ ...|...++..|++..
T Consensus 32 pll~~~l~~l~~--------~--~~~~i~vv~~~~~----~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~ 94 (197)
T 2wee_A 32 TVLGATLDVARQ--------A--GFDQLILTLGGAA----SAVRAAMALD---GTDVVVVEDVERGCAASLRVALARVHP 94 (197)
T ss_dssp EHHHHHHHHHHH--------T--TCSEEEEEECTTH----HHHHHHSCCT---TSEEEECC----CCHHHHHHHHTTSCT
T ss_pred cHHHHHHHHHHh--------c--CCCcEEEEeCCCH----HHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHHhcc
Confidence 455555555544 1 1247777764322 2233332222 46666654 2457888999999887
Q ss_pred CCCEEEEEcCCCC-CChhhHHHHHHH
Q 027065 156 RGELLLMLDADGA-TKVTDLEKLESQ 180 (229)
Q Consensus 156 ~~d~v~~lD~D~~-~~~~~l~~l~~~ 180 (229)
..+.++++++|.. ++++.+.++++.
T Consensus 95 ~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 95 RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 4689999999995 689999999987
No 29
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=94.38 E-value=0.28 Score=37.83 Aligned_cols=72 Identities=8% Similarity=0.117 Sum_probs=47.6
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-----CCCHHHHHHHHHHhcC--CCEEEEEcCCCC-CChhhHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-----NHGKGEAIRKGMLHSR--GELLLMLDADGA-TKVTDLE 175 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-----~~gk~~a~n~gl~~a~--~d~v~~lD~D~~-~~~~~l~ 175 (229)
-+|+|+.+. +.. +++.+++. +.++..+. ..|...++..|++... .|.++++++|.. ++++.+.
T Consensus 46 ~~ivvv~~~--~~i----~~~~~~~~---~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~ 116 (228)
T 1ezi_A 46 DRIIVSTDG--GLI----AEEAKNFG---VEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIR 116 (228)
T ss_dssp SEEEEEESC--HHH----HHHHHHTT---CEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHH
T ss_pred CEEEEECCC--HHH----HHHHHHcC---CEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHH
Confidence 478888752 222 33333433 55555432 3456777888888763 589999999986 5889999
Q ss_pred HHHHHHHHh
Q 027065 176 KLESQIHAV 184 (229)
Q Consensus 176 ~l~~~~~~~ 184 (229)
++++.+.+.
T Consensus 117 ~l~~~~~~~ 125 (228)
T 1ezi_A 117 EAFSLFDEK 125 (228)
T ss_dssp HHHTTCCTT
T ss_pred HHHHHHHhc
Confidence 999877543
No 30
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=93.59 E-value=0.15 Score=38.25 Aligned_cols=70 Identities=13% Similarity=0.249 Sum_probs=48.0
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCCHHHHHHHHHHhc--CCCEEEEEcCCCCC-ChhhHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHS--RGELLLMLDADGAT-KVTDLEKLES 179 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~gk~~a~n~gl~~a--~~d~v~~lD~D~~~-~~~~l~~l~~ 179 (229)
-+|+|+.+...+ .++++...+ ++.++..+ ...|...++..|++.. ..++++++++|..+ +++.+.++++
T Consensus 47 ~~i~vv~~~~~~----~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~ 119 (199)
T 2waw_A 47 DQLIVTLGGAAD----EVLEKVELD---GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIA 119 (199)
T ss_dssp SEEEEEECTTHH----HHHHHSCCT---TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CcEEEEeCCCHH----HHHHHhccC---CCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHh
Confidence 477777653222 223332222 35666543 2457778899999887 56999999999985 8899999998
Q ss_pred H
Q 027065 180 Q 180 (229)
Q Consensus 180 ~ 180 (229)
.
T Consensus 120 ~ 120 (199)
T 2waw_A 120 G 120 (199)
T ss_dssp H
T ss_pred h
Confidence 8
No 31
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=93.52 E-value=1.1 Score=34.64 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=47.3
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-C-CCCHHHHHHHHHHhcCCCEEEEEcCCCC-CChhhHHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-R-NHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQ 180 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~-~~gk~~a~n~gl~~a~~d~v~~lD~D~~-~~~~~l~~l~~~ 180 (229)
-+|+|+.+. +. +.++..++ +++++..+ . ..|.+++ -.|++....+.++++++|.. ++++.+.++++.
T Consensus 44 ~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~ 113 (245)
T 1h7e_A 44 AEVWVATDD--PR----VEQAVQAF---GGKAIMTRNDHESGTDRL-VEVMHKVEADIYINLQGDEPMIRPRDVETLLQG 113 (245)
T ss_dssp CEEEEEESC--HH----HHHHHHHT---TCEEEECCSCCSSHHHHH-HHHHHHSCCSEEEECCTTCTTCCHHHHHHHHHH
T ss_pred CeEEEECCc--HH----HHHHHHHc---CCeEEeCCCccCCcHHHH-HHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHH
Confidence 578887752 32 33333333 36677653 2 3445444 45666667799999999996 589999999998
Q ss_pred HHHh
Q 027065 181 IHAV 184 (229)
Q Consensus 181 ~~~~ 184 (229)
+.+.
T Consensus 114 ~~~~ 117 (245)
T 1h7e_A 114 MRDD 117 (245)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8765
No 32
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=93.22 E-value=0.82 Score=35.00 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=50.2
Q ss_pred EEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCCHHHHHHHHHHhcCCCEEEEEcCCCCC-ChhhHHHHHHHHH
Q 027065 105 EVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEKLESQIH 182 (229)
Q Consensus 105 eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~-~~~~l~~l~~~~~ 182 (229)
+|+||-+. + +..+.+...+ +++++..+ ...|...++..|++.+ .+++ ++++|..+ +++.+.++++.+.
T Consensus 40 ~vvvv~~~--~---~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~ 109 (208)
T 3ngw_A 40 QTVFVCRD--E---KQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGE 109 (208)
T ss_dssp EEEEECSS--H---HHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHH
T ss_pred CEEEEECC--H---HHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhh
Confidence 88888642 1 2333443333 35566543 3457889999999988 8999 99999964 9999999999987
Q ss_pred Hh
Q 027065 183 AV 184 (229)
Q Consensus 183 ~~ 184 (229)
+.
T Consensus 110 ~~ 111 (208)
T 3ngw_A 110 KA 111 (208)
T ss_dssp HH
T ss_pred cC
Confidence 53
No 33
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=93.10 E-value=1.3 Score=35.05 Aligned_cols=75 Identities=7% Similarity=0.128 Sum_probs=48.5
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEc-CCCCCHHHHHHHHHHhc---CCCEEEEEcCCCC-CChhhHHHH
Q 027065 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILL-GRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEKL 177 (229)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~-~~~~gk~~a~n~gl~~a---~~d~v~~lD~D~~-~~~~~l~~l 177 (229)
--+|+|+-| ++. +.++..+++ ++++.. +...+...++..|++.. ..|+++++++|.. ++++.+.++
T Consensus 42 ~~~vvVvt~--~~~----i~~~~~~~g---~~v~~~~~~~~~Gt~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~l 112 (253)
T 4fcu_A 42 FDDLCVATD--DER----IAEICRAEG---VDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQV 112 (253)
T ss_dssp CCEEEEEES--CHH----HHHHHHTTT---CCEEECCTTCCCHHHHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHH
T ss_pred CCEEEEECC--HHH----HHHHHHHcC---CeEEEeCCCCCChHHHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHH
Confidence 457888875 222 333344433 445442 33333334667777765 3599999999994 589999999
Q ss_pred HHHHHHhCC
Q 027065 178 ESQIHAVGR 186 (229)
Q Consensus 178 ~~~~~~~~~ 186 (229)
++.+.+.++
T Consensus 113 i~~~~~~~~ 121 (253)
T 4fcu_A 113 AKLLVDKPN 121 (253)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCCC
Confidence 999987643
No 34
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=92.99 E-value=0.15 Score=40.93 Aligned_cols=55 Identities=18% Similarity=0.111 Sum_probs=45.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChh----hHHHHHHHHHHhCC
Q 027065 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVT----DLEKLESQIHAVGR 186 (229)
Q Consensus 132 ~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~----~l~~l~~~~~~~~~ 186 (229)
.+.++..+...|.+.++..|+.....+.++++.+|..+.++ .+.++++...+...
T Consensus 96 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 96 CFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred cEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 45666666678999999999988877889999999988888 79999998876554
No 35
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=92.88 E-value=0.33 Score=41.61 Aligned_cols=88 Identities=17% Similarity=0.211 Sum_probs=58.5
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcC-C
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR-G 157 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~-~ 157 (229)
.-++.+++.+.+. .--+|+|+-....+ .++++.... .++++..+...|...++..|++... .
T Consensus 37 pli~~~l~~l~~~----------~~~~i~vv~~~~~~----~i~~~~~~~---~~~~v~~~~~~g~~~~i~~~~~~~~~~ 99 (459)
T 4fce_A 37 PMVQHVIDAAMKL----------GAQHVHLVYGHGGE----LLKKTLADP---SLNWVLQAEQLGTGHAMQQAAPHFADD 99 (459)
T ss_dssp EHHHHHHHHHHHH----------TCSCEEEEESSCHH----HHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTT
T ss_pred eHHHHHHHHHHhC----------CCCcEEEEeCCCHH----HHHHHhccC---CcEEEeCCCCCCcHHHHHHHHHhcCCC
Confidence 4555666655551 12467777653322 233332222 4667777777899999999999886 4
Q ss_pred CEEEEEcCCC-CCChhhHHHHHHHHHH
Q 027065 158 ELLLMLDADG-ATKVTDLEKLESQIHA 183 (229)
Q Consensus 158 d~v~~lD~D~-~~~~~~l~~l~~~~~~ 183 (229)
+.++++++|. .+.+..+.++++.+.+
T Consensus 100 ~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 100 EDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 8999999999 5789999999988765
No 36
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=92.61 E-value=2.3 Score=33.37 Aligned_cols=87 Identities=10% Similarity=0.265 Sum_probs=53.0
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-C-CCCHHHHHHHHHHhc-
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-R-NHGKGEAIRKGMLHS- 155 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~-~~gk~~a~n~gl~~a- 155 (229)
..++.+++.+.+ . . .-+|+|+.+. +. +.++..++ ++.++..+ . ..|.+ .+..+++..
T Consensus 28 pli~~~l~~l~~--------~-~-~~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~-~~~~~~~~l~ 87 (262)
T 1vic_A 28 PMIQHVFEKALQ--------S-G-ASRVIIATDN--EN----VADVAKSF---GAEVCMTSVNHNSGTE-RLAEVVEKLA 87 (262)
T ss_dssp EHHHHHHHHHHH--------T-T-CSEEEEEESC--HH----HHHHHHHT---TCEEEECCCSSCCHHH-HHHHHHHHTT
T ss_pred EHHHHHHHHHHh--------C-C-CceEEEECCc--HH----HHHHHHhc---CCEEEECCccccCChH-HHHHHHHHhc
Confidence 556666666655 1 1 2578888652 32 23333333 36666653 2 23443 333444433
Q ss_pred --CCCEEEEEcCCCC-CChhhHHHHHHHHHHhC
Q 027065 156 --RGELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (229)
Q Consensus 156 --~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~ 185 (229)
..++++++++|.. +++..+.++++.+.+..
T Consensus 88 ~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~ 120 (262)
T 1vic_A 88 IPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 120 (262)
T ss_dssp CCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcC
Confidence 4699999999995 68899999999887654
No 37
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=92.27 E-value=1 Score=34.50 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=49.6
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhc-------CCCEEEEEcCCCC-CChhhHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS-------RGELLLMLDADGA-TKVTDLE 175 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a-------~~d~v~~lD~D~~-~~~~~l~ 175 (229)
-+|+|+-+...+...+ +.+ +....+.++ .+..|...++..|++.. ..+.++++++|.. ++++.+.
T Consensus 51 ~~ivvv~~~~~~~~~~-~~~----~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~ 123 (231)
T 1vgw_A 51 DLTVVVVSPEDTFADK-VQT----AFPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALA 123 (231)
T ss_dssp CEEEEECCTTCSTHHH-HHH----HCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHH
T ss_pred CeEEEEECccHHHHHH-HHh----cCCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHH
Confidence 4777776533333333 322 211246554 34568888888888765 4699999999985 5888999
Q ss_pred HHHHHHHHhC
Q 027065 176 KLESQIHAVG 185 (229)
Q Consensus 176 ~l~~~~~~~~ 185 (229)
++++.+.+..
T Consensus 124 ~l~~~~~~~~ 133 (231)
T 1vgw_A 124 RLIEQAGNAA 133 (231)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHHHhhcC
Confidence 9999886543
No 38
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=92.27 E-value=2.1 Score=37.17 Aligned_cols=105 Identities=12% Similarity=0.136 Sum_probs=70.4
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHH
Q 027065 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (229)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~ 150 (229)
++|..|.. -|+-.|+.+.+ . ..-+|+||-.--.+...+.+.+....+. ..++++..++..|-++|+..
T Consensus 34 l~pv~gkp-~i~~~l~~~~~----~------g~~~i~vv~~~~~~~i~~~~~~~~~~~~-~~i~~~~q~~~lGTa~Av~~ 101 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAK----L------APQRLIVVLGHDHQRIAPLVGELADTLG-RTIDVALQDRPLGTGHAVLC 101 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHH----H------CCSEEEEEECTTHHHHHHHHHHHHHHHT-SCCEEEECSSCCCHHHHHHH
T ss_pred HeEECChh-HHHHHHHHHHh----C------CCCEEEEEeCCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCCcHHHHHH
Confidence 56677764 45555555544 1 2357888876544555555655555544 36888888888999999999
Q ss_pred HHHhcCC---CEEEEEcCCC-CCChhhHHHHHHHHHHhCCc
Q 027065 151 GMLHSRG---ELLLMLDADG-ATKVTDLEKLESQIHAVGRK 187 (229)
Q Consensus 151 gl~~a~~---d~v~~lD~D~-~~~~~~l~~l~~~~~~~~~~ 187 (229)
++..... +.++++.+|+ .+..+.+..|++........
T Consensus 102 a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~ 142 (501)
T 3st8_A 102 GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAA 142 (501)
T ss_dssp HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHhccccccceeeecCcceeecHHHHHHHHHHHhhcccc
Confidence 9988753 3566666665 56788899998887665543
No 39
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=91.77 E-value=1.4 Score=33.76 Aligned_cols=86 Identities=10% Similarity=0.137 Sum_probs=54.1
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC--CCCHHHHHHHHHHhcC
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR--NHGKGEAIRKGMLHSR 156 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~--~~gk~~a~n~gl~~a~ 156 (229)
.-++.+++++.+. --+|+|+-+. + .+.++..++ +.++..++ ..|.+++. .|++...
T Consensus 28 pli~~~l~~~~~~-----------~~~i~v~~~~--~----~i~~~~~~~----~~~~~~~~~~~~g~~~~~-~~~~~~~ 85 (234)
T 2y6p_A 28 PLIRWVVEGLVKT-----------GERVILATDS--E----RVKEVVEDL----CEVFLTPSDLPSGSDRVL-YVVRDLD 85 (234)
T ss_dssp EHHHHHHHHHHTT-----------TSCEEEEESC--H----HHHHHHTTT----SEEEECCTTCCSHHHHHH-HHHTTCC
T ss_pred EHHHHHHHHHHHh-----------CCEEEEECCh--H----HHHHHHHhc----eEEEECCcccccchHHHH-HHHHhCC
Confidence 4555566655541 2367777643 2 223333322 34444432 34566655 5777777
Q ss_pred CCEEEEEcCCC-CCChhhHHHHHHHHHHhCC
Q 027065 157 GELLLMLDADG-ATKVTDLEKLESQIHAVGR 186 (229)
Q Consensus 157 ~d~v~~lD~D~-~~~~~~l~~l~~~~~~~~~ 186 (229)
.|+++++++|. .+++..+.++++.+.+.++
T Consensus 86 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 86 VDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp CSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred CCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 89999999999 6788999999998876553
No 40
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=91.73 E-value=0.29 Score=37.28 Aligned_cols=42 Identities=12% Similarity=-0.063 Sum_probs=30.8
Q ss_pred HHHHHHHH----hcCCCEEEEEcCC---CCCChhhHHHHHHHHHHhCCccee
Q 027065 146 EAIRKGML----HSRGELLLMLDAD---GATKVTDLEKLESQIHAVGRKEYN 190 (229)
Q Consensus 146 ~a~n~gl~----~a~~d~v~~lD~D---~~~~~~~l~~l~~~~~~~~~~~~~ 190 (229)
.|+|..+. ...+|+++++|+| ...+|+.+.+++ +.+.+.+++
T Consensus 39 raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl---~~g~DVV~G 87 (203)
T 2c0n_A 39 VQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF---NEGYDVVCG 87 (203)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH---HHTCSEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH---hCCCCEEEE
Confidence 34444443 3567999999999 999999999998 445555543
No 41
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=91.55 E-value=2.2 Score=32.51 Aligned_cols=76 Identities=16% Similarity=0.266 Sum_probs=50.0
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcC--CCEEEEEcCCC-CCChhhHHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR--GELLLMLDADG-ATKVTDLEKLESQ 180 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~--~d~v~~lD~D~-~~~~~~l~~l~~~ 180 (229)
-+|+|+-+. ...++.+.+...+. ..+.++. ...|...++..|++... .++++++|+|. .++++.+.++++.
T Consensus 49 ~~ivvv~~~---~~~~~~~~~~~~~~-~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~ 122 (228)
T 2yc3_A 49 KEIVVVCDP---FFRDIFEEYEESID-VDLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKD 122 (228)
T ss_dssp EEEEEECCG---GGHHHHHTTTTTSS-SEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CeEEEEECh---HHHHHHHHHHHhCC-CcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHH
Confidence 467777542 22233333333332 1354443 24688888999998765 48999999997 5689999999998
Q ss_pred HHHhC
Q 027065 181 IHAVG 185 (229)
Q Consensus 181 ~~~~~ 185 (229)
+.+.+
T Consensus 123 ~~~~~ 127 (228)
T 2yc3_A 123 GSAVG 127 (228)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 87654
No 42
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=91.45 E-value=0.55 Score=37.87 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=45.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCC--hhhHHHHHHHHHHhCC
Q 027065 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATK--VTDLEKLESQIHAVGR 186 (229)
Q Consensus 132 ~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~--~~~l~~l~~~~~~~~~ 186 (229)
.+.++..+...|.+.++..|+.....+.++++.+|..+. +..+.++++...+...
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~ 163 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG 163 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence 477777666789999999998887678899999999987 6889999998876543
No 43
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=91.28 E-value=0.75 Score=36.49 Aligned_cols=78 Identities=10% Similarity=0.158 Sum_probs=51.9
Q ss_pred ceEEEEEECCCCcchHHHHHHHHH---HcCCCcEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHH
Q 027065 103 TYEVLIIDDGSSDGTKRVAFDFVR---KYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179 (229)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~---~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~ 179 (229)
--+|+|+-+... ..++ .++.. .+. ..+.++..++..|.+.++..|++....+.++++.+|..+. ..+.++++
T Consensus 70 ~~~iivv~~~~~--~~~~-~~~~~~~~~~~-~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~ 144 (269)
T 4ecm_A 70 ITDIMIITGKEH--MGDV-VSFLGSGQEFG-VSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVE 144 (269)
T ss_dssp CCEEEEEECTTT--HHHH-HHHHTTSGGGT-CEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHH
T ss_pred CCEEEEECChhh--HHHH-HHHHhhccccC-ceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHH
Confidence 357777766332 1222 22222 122 2455555666789999999998887788999999999776 67888888
Q ss_pred HHHHhC
Q 027065 180 QIHAVG 185 (229)
Q Consensus 180 ~~~~~~ 185 (229)
.+.+..
T Consensus 145 ~~~~~~ 150 (269)
T 4ecm_A 145 EFTNQK 150 (269)
T ss_dssp HHHTSS
T ss_pred HHHhcC
Confidence 876543
No 44
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=91.23 E-value=0.7 Score=39.46 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=59.3
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcC-C
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR-G 157 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~-~ 157 (229)
.-|+.+++++.+ . .--+++|+-+... +.++++...+ .++++..+...|...++..|++... .
T Consensus 34 pli~~~l~~l~~--------~--~~~~iivv~~~~~----~~i~~~~~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~~ 96 (456)
T 2v0h_A 34 PMVKHVIDTAHQ--------L--GSENIHLIYGHGG----DLMRTHLANE---QVNWVLQTEQLGTAHAVQQAAPFFKDN 96 (456)
T ss_dssp EHHHHHHHHHHH--------T--TCSCEEEEECTTH----HHHHHHTTTC---CCEEEECSCCCCHHHHHHHHGGGCCTT
T ss_pred cHHHHHHHHHHh--------C--CCCcEEEEeCCCH----HHHHHHhhcC---CcEEEeCCCCCCcHHHHHHHHHhcCCC
Confidence 455556665555 1 1246777765321 2333333322 3667776667899999999998875 7
Q ss_pred CEEEEEcCCCC-CChhhHHHHHHHHHH
Q 027065 158 ELLLMLDADGA-TKVTDLEKLESQIHA 183 (229)
Q Consensus 158 d~v~~lD~D~~-~~~~~l~~l~~~~~~ 183 (229)
++++++++|.. +.+..+.++++...+
T Consensus 97 ~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 97 ENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 99999999995 688899999887654
No 45
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=91.18 E-value=0.14 Score=38.91 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=39.3
Q ss_pred cEEEEEcCC-CCCHHHHHHHHHHhcCC-CEEEEEcCCCC-CChhhHHHHHHHH
Q 027065 132 NVRIILLGR-NHGKGEAIRKGMLHSRG-ELLLMLDADGA-TKVTDLEKLESQI 181 (229)
Q Consensus 132 ~i~vi~~~~-~~gk~~a~n~gl~~a~~-d~v~~lD~D~~-~~~~~l~~l~~~~ 181 (229)
++ ++.++. ..|...++..|++.... +.++++++|.. ++++.+.++++.+
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 45 665543 36888999999998865 89999999995 6899999998876
No 46
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=91.01 E-value=0.63 Score=37.80 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=62.8
Q ss_pred EEeec-CCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCC-cchHHHHHHHHHHcC-CCcEEEEEcC--------
Q 027065 71 IIPAF-NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSS-DGTKRVAFDFVRKYT-VDNVRIILLG-------- 139 (229)
Q Consensus 71 iip~~-ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~-~~~i~vi~~~-------- 139 (229)
++|.- +....|..+|+++.+. .--+|+||-.... +...+.+. ...+ ..++.++..+
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~----------~~~~i~vv~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~ 91 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRA----------GFGRLVFVIRHSFEKEFREKIL---TKYEGRIPVELVFQELDRLPEGF 91 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHH----------TCCEEEEEECGGGHHHHHHHTH---HHHTTTSCEEEEECCTTCCCTTC
T ss_pred EeEcCCCCeeHHHHHHHHHHHC----------CCCeEEEEcCchHHHHHHHHHH---HHhccCCcEEEEecccccccccc
Confidence 34442 3346677777776652 1347777766331 22333332 2222 1246777655
Q ss_pred -------CCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHH
Q 027065 140 -------RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHA 183 (229)
Q Consensus 140 -------~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~ 183 (229)
+..|.++|+..|....+.+ ++++.+|..+.++.+.++++...+
T Consensus 92 ~~~~~~~~~~Gt~~al~~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 92 SCPEGREKPWGTNHAVLMGRDAIREP-FAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCCTTCCSCCCHHHHHHTTTTTCCSC-EEEEESSCBCCHHHHHHHHHHHHT
T ss_pred cccccccccCCcHHHHHHHHHhcCCC-EEEEECCeecCHHHHHHHHHHHHH
Confidence 4689999999888887555 556679999999889999998875
No 47
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=90.96 E-value=3.2 Score=32.30 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=58.8
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcC-CCcEEEEEcCCCCCHHHHHHHHHHhcC-
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT-VDNVRIILLGRNHGKGEAIRKGMLHSR- 156 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~~~i~vi~~~~~~gk~~a~n~gl~~a~- 156 (229)
.-+..+|+++.+ ...--+|+||-+... .+.+++....+. ...+.++.. ..+...++..|++...
T Consensus 33 pll~~~l~~~~~---------~~~~~~ivvv~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sv~~al~~l~~ 98 (246)
T 3f1c_A 33 PIIVHTVEKFIL---------NTRFDKILISSPKEW---MNHAEDNIKKYISDDRIVVIEG--GEDRNETIMNGIRFVEK 98 (246)
T ss_dssp EHHHHHHHHHHT---------CTTCSEEEEEECGGG---HHHHHHHHHHHCCCTTEEEEEC--CSSHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHc---------CCCCCEEEEEeCHHH---HHHHHHHHHHhCCCCCEEEECC--CCchHHHHHHHHHHHhh
Confidence 556666666554 111357777765322 223333333332 124666553 3456677777887653
Q ss_pred ------CCEEEEEcCCC-CCChhhHHHHHHHHHHhCC
Q 027065 157 ------GELLLMLDADG-ATKVTDLEKLESQIHAVGR 186 (229)
Q Consensus 157 ------~d~v~~lD~D~-~~~~~~l~~l~~~~~~~~~ 186 (229)
.++|+++|+|. .++++.+.++++.+.+.+.
T Consensus 99 ~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a 135 (246)
T 3f1c_A 99 TYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA 135 (246)
T ss_dssp HTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred hhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 58999999998 4689999999999987653
No 48
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=90.41 E-value=1.2 Score=33.63 Aligned_cols=49 Identities=18% Similarity=0.178 Sum_probs=40.3
Q ss_pred cEEEEEcCC-C-CCHHHHHHHHHHhcCCCEEEEEcCCC-CCChhhHHHHHHH
Q 027065 132 NVRIILLGR-N-HGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQ 180 (229)
Q Consensus 132 ~i~vi~~~~-~-~gk~~a~n~gl~~a~~d~v~~lD~D~-~~~~~~l~~l~~~ 180 (229)
.+.++..+. . .|...++..|++....++++++++|. .++++.+..+++.
T Consensus 65 ~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 466665542 3 68999999999999889999999999 5689999999876
No 49
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=90.21 E-value=0.89 Score=39.01 Aligned_cols=95 Identities=8% Similarity=-0.008 Sum_probs=62.3
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHH
Q 027065 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKG 151 (229)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~g 151 (229)
+|..+. ..++.+++.+.+ ..--+|+|+-+.. .+.++++... .+.++..+...|.+.++..|
T Consensus 34 ~~i~gk-pli~~~l~~l~~----------~g~~~iivv~~~~----~~~i~~~~~~----~i~~v~~~~~~G~~~sl~~a 94 (468)
T 1hm9_A 34 HKVAGI-SMLEHVFRSVGA----------IQPEKTVTVVGHK----AELVEEVLAG----QTEFVTQSEQLGTGHAVMMT 94 (468)
T ss_dssp SEETTE-EHHHHHHHHHHT----------TCCSEEEEEECTT----HHHHHHSSSS----SSEEEECSSCCCHHHHHHTT
T ss_pred eEECCc-cHHHHHHHHHHh----------cCCCCEEEEECCC----HHHHHHHhCC----CcEEEeCCccCChHHHHHHH
Confidence 344343 555556655544 1234777776432 1222222111 36677766678999999999
Q ss_pred HHhcC--CCEEEEEcCCCC-CChhhHHHHHHHHHHhC
Q 027065 152 MLHSR--GELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (229)
Q Consensus 152 l~~a~--~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~ 185 (229)
++... .+.++++++|.. +.+..+.++++.+.+..
T Consensus 95 ~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~ 131 (468)
T 1hm9_A 95 EPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHK 131 (468)
T ss_dssp HHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcC
Confidence 88775 689999999996 68899999999887654
No 50
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=90.20 E-value=1.8 Score=33.20 Aligned_cols=45 Identities=4% Similarity=0.022 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHhc----C---CCEEEEEcCCC-CCChhhHHHHHHHHHHhC
Q 027065 141 NHGKGEAIRKGMLHS----R---GELLLMLDADG-ATKVTDLEKLESQIHAVG 185 (229)
Q Consensus 141 ~~gk~~a~n~gl~~a----~---~d~v~~lD~D~-~~~~~~l~~l~~~~~~~~ 185 (229)
..|...++..|++.. . .++++++++|. .++++.+.++++.+.+..
T Consensus 83 ~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2vsh_A 83 GADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD 135 (236)
T ss_dssp CSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS
T ss_pred CCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 356778888888776 3 48999999999 568999999999887653
No 51
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=89.88 E-value=3.6 Score=33.24 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=60.6
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHH-cCCCcEEEEEcCCCCCHHHHHHH
Q 027065 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK-YTVDNVRIILLGRNHGKGEAIRK 150 (229)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-~~~~~i~vi~~~~~~gk~~a~n~ 150 (229)
+|..+...-|..+++++.+. --+|+|+-+.. ..+.+++.... +..+.+.++..+...|.+.++..
T Consensus 31 l~i~gg~pli~~~l~~l~~~-----------~~~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~ 96 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL-----------VDETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIAL 96 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT-----------CSEEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHcc-----------CCCEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHHH
Confidence 34433445566666666551 24677665422 22233333333 32114566766667899999999
Q ss_pred HHHhcC-CCEEEEEcCCCCC-ChhhHHHHHHH
Q 027065 151 GMLHSR-GELLLMLDADGAT-KVTDLEKLESQ 180 (229)
Q Consensus 151 gl~~a~-~d~v~~lD~D~~~-~~~~l~~l~~~ 180 (229)
|..... .++++++.+|..+ +++.+.++++.
T Consensus 97 a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 97 SALMSDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHHTSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHHhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 988775 4689999999998 67879998886
No 52
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=89.32 E-value=5.2 Score=30.16 Aligned_cols=87 Identities=14% Similarity=0.065 Sum_probs=55.8
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhc-C
Q 027065 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS-R 156 (229)
Q Consensus 78 ~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a-~ 156 (229)
..-++.+++.+.+. ...-+|+|+.+... .+.++++.. .. .+.++.. ..+...++..|++.. .
T Consensus 30 ~pli~~~l~~l~~~---------~~~~~i~vv~~~~~---~~~~~~~~~-~~--~v~~~~~--~~~~~~~i~~al~~~~~ 92 (223)
T 2xwl_A 30 TPLLEHALSGLRAS---------GVIDRIVIAVPPAL---TDESKLVFG-GE--DSVIVSG--GVDRTESVALALEAAGD 92 (223)
T ss_dssp EEHHHHHHHHHHHH---------SCCSEEEEEECGGG---HHHHHHHTC-BT--TEEEEEC--CSSHHHHHHHHHTTCTT
T ss_pred eEHHHHHHHHHhcC---------CCCCeEEEEEcccH---HHHHHHHhc-cC--CeEEEcC--CCCHHHHHHHHHHhcCC
Confidence 34556666666541 11247777765321 222333321 12 4666553 345778899999888 6
Q ss_pred CCEEEEEcCCCC-CChhhHHHHHHHH
Q 027065 157 GELLLMLDADGA-TKVTDLEKLESQI 181 (229)
Q Consensus 157 ~d~v~~lD~D~~-~~~~~l~~l~~~~ 181 (229)
.++++++++|.. ++++.+.++++.+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 799999999995 6888999999988
No 53
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=89.05 E-value=0.21 Score=37.57 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=52.8
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCC-CcEEEEEcCCCCCHHHHHHHHHHhcCC
Q 027065 79 HRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTV-DNVRIILLGRNHGKGEAIRKGMLHSRG 157 (229)
Q Consensus 79 ~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-~~i~vi~~~~~~gk~~a~n~gl~~a~~ 157 (229)
.-+..+++.+.+ .. --+|+|+-+...+...+.+.+ .++. .++.++.. ...|...++..|++.. .
T Consensus 28 pli~~~l~~l~~---------~~-~~~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~-~~~g~~~si~~al~~~-~ 92 (196)
T 3rsb_A 28 CLIDYVVSPLLK---------SK-VNNIFIATSPNTPKTKEYINS---AYKDYKNIVVIDT-SGKGYIEDLNECIGYF-S 92 (196)
T ss_dssp EHHHHHHHHHHS---------SS-CCCEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-S
T ss_pred EHHHHHHHHHHH---------CC-CCEEEEEeCCChHHHHHHHHh---hccCCCCEEEEEC-CCCCcHHHHHHHHHhC-C
Confidence 455555555544 11 347777765444433344333 2321 14555543 3455556677777777 8
Q ss_pred CEEEEEcCCCC-CChhhHHHHHHHHHH
Q 027065 158 ELLLMLDADGA-TKVTDLEKLESQIHA 183 (229)
Q Consensus 158 d~v~~lD~D~~-~~~~~l~~l~~~~~~ 183 (229)
+.++++++|.. ++++.+.++++.+.+
T Consensus 93 ~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 93 EPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp SCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 99999999995 599999999999976
No 54
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=88.42 E-value=1.5 Score=35.29 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=43.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCC----hh---hHHHHHHHHHHhCC
Q 027065 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATK----VT---DLEKLESQIHAVGR 186 (229)
Q Consensus 132 ~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~----~~---~l~~l~~~~~~~~~ 186 (229)
.+.++..+...|.+.++..|+.....+.++++.+|..+. +. .+.++++...+...
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 456666666789999999999887667899999999986 45 79999998866554
No 55
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=87.83 E-value=1.1 Score=34.67 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=50.8
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcC-CCEEEEEcCCCC-CChhhHHHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR-GELLLMLDADGA-TKVTDLEKLESQI 181 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~-~d~v~~lD~D~~-~~~~~l~~l~~~~ 181 (229)
-+|+|+-+...+...+ +. .++...++++.. ..|...++..|++... .+.++++++|.. ++++.+.++++.+
T Consensus 52 ~~ivvv~~~~~~~~~~-~~----~~~~~~v~~~~~--~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~ 124 (236)
T 1i52_A 52 KRVVIAISPGDSRFAQ-LP----LANHPQITVVDG--GDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALS 124 (236)
T ss_dssp EEEEEEECTTCCSGGG-SG----GGGCTTEEEEEC--CSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGG
T ss_pred CeEEEEeCccHHHHHH-HH----hcCCCCEEEECC--CCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHH
Confidence 4777776644443333 22 222114665542 3588888999999884 799999999986 5888999999877
Q ss_pred HHhC
Q 027065 182 HAVG 185 (229)
Q Consensus 182 ~~~~ 185 (229)
.+.+
T Consensus 125 ~~~~ 128 (236)
T 1i52_A 125 ETSR 128 (236)
T ss_dssp GTCS
T ss_pred HhcC
Confidence 6543
No 56
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=87.53 E-value=4.4 Score=30.39 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=37.9
Q ss_pred EEEEEcC-CCCCHHHHHHHHHHhcCCCEEEEEcCCCCC-ChhhHHH-HH
Q 027065 133 VRIILLG-RNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEK-LE 178 (229)
Q Consensus 133 i~vi~~~-~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~-~~~~l~~-l~ 178 (229)
++++..+ ...|...++..|++....+.++++.+|..+ +++.+.+ ++
T Consensus 72 ~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 72 APVVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred ceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5566644 457999999999999888999999999975 8888888 77
No 57
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=87.09 E-value=8.9 Score=29.62 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=57.5
Q ss_pred CCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcC
Q 027065 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR 156 (229)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~ 156 (229)
....+..+++.+.+ ...--+|+||-+... .+.+++.... .+.++.. ..+...++..|++...
T Consensus 34 Gkpll~~~l~~~~~---------~~~~~~ivVv~~~~~---~~~~~~~~~~----~v~~v~g--g~~r~~sv~~gl~~~~ 95 (231)
T 3q80_A 34 GQTLIERAVDGLLD---------SGVVDTVVVAVPADR---TDEARQILGH----RAMIVAG--GSNRTDTVNLALTVLS 95 (231)
T ss_dssp TEEHHHHHHHHHHH---------TSCCCEEEEEECGGG---HHHHHHHHGG----GCEEEEC--CSSHHHHHHHHHGGGC
T ss_pred CeEHHHHHHHHHHh---------CCCCCeEEEECChHH---HHHHHHHhcC----CeEEEcC--CCchHHHHHHHHHHhh
Confidence 33456666666554 112347777765322 2233333322 3555553 2345678888998775
Q ss_pred ----CCEEEEEcCCCCC-ChhhHHHHHHHHHHh
Q 027065 157 ----GELLLMLDADGAT-KVTDLEKLESQIHAV 184 (229)
Q Consensus 157 ----~d~v~~lD~D~~~-~~~~l~~l~~~~~~~ 184 (229)
.++|+++|+|..+ +++.+.++++.+.++
T Consensus 96 ~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~ 128 (231)
T 3q80_A 96 GTAEPEFVLVHDAARALTPPALVARVVEALRDG 128 (231)
T ss_dssp ---CCSEEEECCTTCTTCCHHHHHHHHHHHHTT
T ss_pred hcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhhc
Confidence 4899999999765 899999999998773
No 58
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=86.60 E-value=2.1 Score=34.90 Aligned_cols=54 Identities=11% Similarity=0.125 Sum_probs=42.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHhcCC--CEEEEEcCCCCCC-hhhHHHHHHHHHHhC
Q 027065 132 NVRIILLGRNHGKGEAIRKGMLHSRG--ELLLMLDADGATK-VTDLEKLESQIHAVG 185 (229)
Q Consensus 132 ~i~vi~~~~~~gk~~a~n~gl~~a~~--d~v~~lD~D~~~~-~~~l~~l~~~~~~~~ 185 (229)
.+.++..+...|.+.++..|+..... ++++++.+|..+. +..+.++++...+..
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 46666666678999999988887643 4588999999996 588999998887654
No 59
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=85.36 E-value=3 Score=33.59 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=61.3
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCCHHHH
Q 027065 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (229)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~~~~~gk~~a 147 (229)
++|.++. .-|...++.+... .--+|+||..+.+. +.++++... +. ..+.++..+...|.+.+
T Consensus 27 llpi~gk-pli~~~l~~l~~~----------gi~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 91 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLA----------GIREILIISTPQDT---PRFQQLLGDGSNWG-LDLQYAVQPSPDGLAQA 91 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHT----------TCCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCGGGH
T ss_pred eCeECCE-eHHHHHHHHHHHC----------CCCEEEEEeccccH---HHHHHHHhcccccC-ceEEEeeCCCCCCHHHH
Confidence 4555664 6777777777661 13478777643322 223333332 22 13556666667788889
Q ss_pred HHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHHh
Q 027065 148 IRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAV 184 (229)
Q Consensus 148 ~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~ 184 (229)
+..|++....+-++++.+|..+.+..+.++++...+.
T Consensus 92 l~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~ 128 (293)
T 1fxo_A 92 FLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQR 128 (293)
T ss_dssp HHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhc
Confidence 9888887765555555599877556788888877543
No 60
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=84.01 E-value=4 Score=31.35 Aligned_cols=76 Identities=9% Similarity=0.070 Sum_probs=53.3
Q ss_pred CCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcC
Q 027065 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR 156 (229)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~ 156 (229)
....++.+++.+.+ . .. +|+|+-+ .+...+.+ .+++ +...|...++..|++...
T Consensus 31 g~pll~~~l~~l~~--------~--~~-~ivvv~~--~~~i~~~~----------~~~~---~~~~g~~~~i~~a~~~~~ 84 (232)
T 2dpw_A 31 GRPMVEWVLEALYA--------A--GL-SPVYVGE--NPGLVPAP----------ALTL---PDRGGLLENLEQALEHVE 84 (232)
T ss_dssp TEETHHHHHHHHHH--------T--TC-EEEEESC--CSSCSSCC----------SEEE---CCCSSHHHHHHHHHHTCC
T ss_pred CEEHHHHHHHHHHh--------c--CC-EEEEEeC--hHHHhhhc----------CeEe---cCCCCHHHHHHHHHHHcC
Confidence 34667777777665 1 13 8888733 23221111 2444 456789999999999887
Q ss_pred CCEEEEEcCCCC-CChhhHHHHHH
Q 027065 157 GELLLMLDADGA-TKVTDLEKLES 179 (229)
Q Consensus 157 ~d~v~~lD~D~~-~~~~~l~~l~~ 179 (229)
+.++++++|.. +.++.+.++++
T Consensus 85 -~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 85 -GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp -SEEEEEETTCTTCCHHHHHHHHH
T ss_pred -CCEEEEeCCcccCCHHHHHHHHh
Confidence 99999999996 68999999998
No 61
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=82.52 E-value=10 Score=28.73 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=55.5
Q ss_pred CCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhc-
Q 027065 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS- 155 (229)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a- 155 (229)
....++.+++.+.. ...--+|+|+-+.. ..+.++++.. +. ..+.... ...+...++..|++.+
T Consensus 40 Gkpli~~~i~~l~~---------~~~~~~ivVv~~~~---~~~~~~~~~~-~~-~~~~~~~--gg~~~~~sv~~al~~~~ 103 (234)
T 1vpa_A 40 GRMLFEYPLSTFLK---------SEAIDGVVIVTRRE---WFEVVEKRVF-HE-KVLGIVE--GGDTRSQSVRSALEFLE 103 (234)
T ss_dssp TEETTHHHHHHHHH---------CTTCSEEEEEECGG---GHHHHHTTCC-CT-TEEEEEE--CCSSHHHHHHHHHHHHG
T ss_pred CeEHHHHHHHHHHc---------CCCCCeEEEEEChH---HHHHHHHHhc-cC-CceEEeC--CCCcHHHHHHHHHHHhh
Confidence 34567777777665 11124788876532 2222222221 11 1232211 1223667777888766
Q ss_pred --CCCEEEEEcCCCC-CChhhHHHHHHHHHHhC
Q 027065 156 --RGELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (229)
Q Consensus 156 --~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~ 185 (229)
..++++++++|.. ++++.+.++++.+.+..
T Consensus 104 ~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~ 136 (234)
T 1vpa_A 104 KFSPSYVLVHDSARPFLRKKHVSEVLRRARETG 136 (234)
T ss_dssp GGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS
T ss_pred hcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 3689999999984 68999999999886643
No 62
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=81.21 E-value=6.6 Score=31.59 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=60.5
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCCHHHH
Q 027065 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (229)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~~~~~gk~~a 147 (229)
++|.++. .-|...++.+... .--+|+||..... .+.++++... +. ..+.++..+...|.+.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~----------gi~~Iivv~~~~~---~~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLA----------GIRDILIISTPRD---LPLYRDLLGDGSQFG-VRFSYRVQEEPRGIADA 92 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHT----------TCCEEEEEECTTT---HHHHHHHHTTSGGGT-SEEEEEECSSCCCGGGH
T ss_pred ecEECCe-eHHHHHHHHHHHC----------CCCeEEEEeccch---HHHHHHHhhhccccC-ceEEEeeCCCCCChHHH
Confidence 4556664 6777777777661 1347877754222 1223333332 22 23556666666788888
Q ss_pred HHHHHHhcC-CCEEEEEcCCCCCChhhHHHHHHHHHHh
Q 027065 148 IRKGMLHSR-GELLLMLDADGATKVTDLEKLESQIHAV 184 (229)
Q Consensus 148 ~n~gl~~a~-~d~v~~lD~D~~~~~~~l~~l~~~~~~~ 184 (229)
+..|++... .+++++. +|..+....+.++++...+.
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~ 129 (295)
T 1lvw_A 93 FIVGKDFIGDSKVALVL-GDNVFYGHRFSEILRRAASL 129 (295)
T ss_dssp HHHTHHHHTTSCEEEEE-TTCCEECTTHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcEEEEE-CCccccCcCHHHHHHHHHHc
Confidence 888888765 4566666 89887556788888877543
No 63
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=78.05 E-value=11 Score=29.95 Aligned_cols=104 Identities=12% Similarity=0.011 Sum_probs=59.7
Q ss_pred eEEEEEeecCC-CCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCC-CCH
Q 027065 67 YISLIIPAFNE-EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN-HGK 144 (229)
Q Consensus 67 ~vsviip~~ne-~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~-~gk 144 (229)
.+-|++.+=+. ...+..++.|++.. .+..++.++|+.++-+++..+.++++...++ -.++++..+.. ...
T Consensus 5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~-------~~~~~~~~~il~~~is~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~ 76 (276)
T 3tzt_A 5 ADALLLTLDENYIPQMKVLMTSIYIN-------NPGRIFDVYLIHSRISEDKLKDLGEDLKKFS-YTLYPIRATDDLFSF 76 (276)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHHHH-------STTCCEEEEEEESCCCHHHHHHHHHHHHTTT-CEEEEEECC------
T ss_pred eEEEEEEeCHhHHHHHHHHHHHHHHh-------CCCCceEEEEEeCCCCHHHHHHHHHHHHHcC-CEEEEEEeCHHHHhc
Confidence 46777555222 24455555555552 1224789999999988888888888877654 25666665432 110
Q ss_pred ---------H-HHHHHHHHhc--CCCEEEEEcCCCCCChhhHHHHHH
Q 027065 145 ---------G-EAIRKGMLHS--RGELLLMLDADGATKVTDLEKLES 179 (229)
Q Consensus 145 ---------~-~a~n~gl~~a--~~d~v~~lD~D~~~~~~~l~~l~~ 179 (229)
. -.+-..-+.. ..+-|+++|+|..+..+ +.++.+
T Consensus 77 ~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d-i~~L~~ 122 (276)
T 3tzt_A 77 AKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP-LDDLLR 122 (276)
T ss_dssp -------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC-SHHHHT
T ss_pred CccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC-HHHHhh
Confidence 0 0111111222 36899999999988653 444444
No 64
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=77.88 E-value=3.9 Score=31.27 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=45.8
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCC-CCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~-~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~ 179 (229)
-+|+|+- ...+ ++.+.+.+++. ..++++..+.. .|...++..|++....+ ++++.+|..++++.+.++++
T Consensus 60 ~~i~vv~-~~~~---~~~~~~~~~~~-~~~~~v~~~~~~~g~~~~i~~a~~~~~~~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 60 SEFIIVA-SRYA---DDIDAFLKDKG-FNYKIVRHDRPEKGNGYSLLVAKNHVEDR-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp EEEEEEE-STTH---HHHHHHHTTSC-CCEEEEECSCGGGCHHHHHHTTGGGCCSS-EEEEETTEEECHHHHHHHTT
T ss_pred CEEEEEe-CChH---HHHHHHHHhcC-CcEEEEECCCCCCCcHHHHHHHHHHCCCC-EEEEcCCcccCHHHHHHHHh
Confidence 4777776 3322 23333333332 25777776543 68889999999887755 55788998888888877765
No 65
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=77.83 E-value=2.6 Score=35.32 Aligned_cols=70 Identities=11% Similarity=0.205 Sum_probs=48.7
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCC-CChhhHHHHHHHH
Q 027065 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQI 181 (229)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~-~~~~~l~~l~~~~ 181 (229)
--+|+|+-+ . .+.++++ .. .+.++. ...|...++..|++....++++++++|.. ++++.+.++++.+
T Consensus 47 ~~~IvVvt~-~----~~~i~~~---~~--~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~ 114 (371)
T 1w55_A 47 FKKIVVTSS-N----ITYMKKF---TK--NYEFIE--GGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENL 114 (371)
T ss_dssp CSCEEEEES-C----HHHHHTT---CS--SSEEEE--CCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTG
T ss_pred CCeEEEEcC-C----HHHHHHH---hC--CCEEEe--CCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHH
Confidence 347888876 2 1222222 11 245553 24577789999999887899999999995 5899999999887
Q ss_pred HHh
Q 027065 182 HAV 184 (229)
Q Consensus 182 ~~~ 184 (229)
.+.
T Consensus 115 ~~~ 117 (371)
T 1w55_A 115 DKA 117 (371)
T ss_dssp GGC
T ss_pred Hhc
Confidence 654
No 66
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=76.20 E-value=29 Score=29.28 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=60.8
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHc--------CCCcEEEEEcC---C
Q 027065 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKY--------TVDNVRIILLG---R 140 (229)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--------~~~~i~vi~~~---~ 140 (229)
+|..+...-++.+|+.+.+. .--+|+|+-....+...+.+.+ .+ ....++++... .
T Consensus 46 lpi~g~~pli~~~l~~l~~~----------g~~~i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~v~i~~~~~~~~ 112 (451)
T 1yp2_A 46 VPLGANYRLIDIPVSNCLNS----------NISKIYVLTQFNSASLNRHLSR---AYASNMGGYKNEGFVEVLAAQQSPE 112 (451)
T ss_dssp CEETTTEETTHHHHHHHHHT----------TCCEEEEEESCCCHHHHHHHHH---HCC--------CCEEEEEESCSSTT
T ss_pred eEECCcceeHHHHHHHHHHC----------CCCEEEEEeccCHHHHHHHHhh---hhhcccccccccCcEEEeccccccc
Confidence 34445435677777777661 2347888776544433333332 22 11124555321 1
Q ss_pred ----CCCHHHHHHHHHHhcC---CCEEEEEcCCCCCChhhHHHHHHHHHHhC
Q 027065 141 ----NHGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHAVG 185 (229)
Q Consensus 141 ----~~gk~~a~n~gl~~a~---~d~v~~lD~D~~~~~~~l~~l~~~~~~~~ 185 (229)
..|.+.++..|+.... .+.++++.+|.... ..+.++++...+..
T Consensus 113 ~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~ 163 (451)
T 1yp2_A 113 NPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRETD 163 (451)
T ss_dssp SCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHHTT
T ss_pred ccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHHcC
Confidence 3688899998888765 58999999999654 45888888776544
No 67
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=75.45 E-value=12 Score=30.75 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=55.1
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHH
Q 027065 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (229)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~ 150 (229)
++|..++..-|..+++++.+. ...-+++|+-+.. -.+.+++.....+ ...++..+...|.+.++..
T Consensus 27 ll~l~g~~pli~~~l~~l~~~---------~~~~~iivvt~~~---~~~~i~~~l~~~~--~~~ii~e~~~~gta~ai~~ 92 (336)
T 2x65_A 27 FLKLFGNKSLMRWTFERVLEE---------MDPKDVIVVTHKD---YVERTKKELPELP--DENIIAEPMKKNTAPACFI 92 (336)
T ss_dssp GCCCBTTBCHHHHHHHHHHTT---------CCGGGEEEEEEGG---GHHHHHHHCTTSC--GGGEEEESSCCCHHHHHHH
T ss_pred EEECCCCCcHHHHHHHHHhcc---------CCCCcEEEEcChH---HHHHHHHHhhccc--cceEEeCCCCCCcHHHHHH
Confidence 345555455666666666541 1123666665421 1233333333322 2345666667888888887
Q ss_pred HHHhcC-CCEEEEEcCCCCCC-hhhHHHHHHH
Q 027065 151 GMLHSR-GELLLMLDADGATK-VTDLEKLESQ 180 (229)
Q Consensus 151 gl~~a~-~d~v~~lD~D~~~~-~~~l~~l~~~ 180 (229)
|..... .++++++.+|..+. ++.+..+++.
T Consensus 93 a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~ 124 (336)
T 2x65_A 93 GTKLADDDEPVLVLPADHRIPDTKKFWKTVKK 124 (336)
T ss_dssp HHTTSCTTCEEEEEETTCBCCCHHHHHHHHHH
T ss_pred HHHhhCCCCEEEEEcCCceeccHHHHHHHHHH
Confidence 776543 57899999999874 4555555444
No 68
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=74.54 E-value=6.8 Score=33.00 Aligned_cols=100 Identities=15% Similarity=0.123 Sum_probs=59.2
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCC------CcEEEEEcCC----C
Q 027065 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTV------DNVRIILLGR----N 141 (229)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~------~~i~vi~~~~----~ 141 (229)
+|..+...-|+.+|+.+.+. .--+|+|+-+...+...+.+.+ .+.. ..+.++.... .
T Consensus 38 lpi~gk~pli~~~l~~l~~~----------gi~~i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~~ 104 (420)
T 3brk_X 38 VYFGGKARIIDFALSNALNS----------GIRRIGVATQYKAHSLIRHLQR---GWDFFRPERNESFDILPASQRVSET 104 (420)
T ss_dssp SEETTTEETHHHHHHHHHHT----------TCCEEEEEECTTCHHHHHHHHH---HSCCCCGGGTCEEEEECCC------
T ss_pred cccCCCCcHHHHHHHHHHhC----------CCCeEEEEeCCChHHHHHHHhh---hhccccccccCCEEEeCccccccCC
Confidence 34444435667777777661 1347888776443333333322 2321 1355553221 2
Q ss_pred ---CCHHHHHHHHHHhcC---CCEEEEEcCCCCCChhhHHHHHHHHHHhC
Q 027065 142 ---HGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHAVG 185 (229)
Q Consensus 142 ---~gk~~a~n~gl~~a~---~d~v~~lD~D~~~~~~~l~~l~~~~~~~~ 185 (229)
.|.+.++..|+.... .+.++++.+|... +..+.++++...+..
T Consensus 105 ~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~ 153 (420)
T 3brk_X 105 QWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDSG 153 (420)
T ss_dssp -CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHTT
T ss_pred ccccCCHHHHHHHHHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHcC
Confidence 688899988887653 4889999999954 455888888776544
No 69
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=74.39 E-value=18 Score=27.76 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=34.6
Q ss_pred CCCCCHHHHHHHHHHhc-CCCEEEEEcCCCCCChhhHHHHHHHHHHhC
Q 027065 139 GRNHGKGEAIRKGMLHS-RGELLLMLDADGATKVTDLEKLESQIHAVG 185 (229)
Q Consensus 139 ~~~~gk~~a~n~gl~~a-~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~ 185 (229)
+...|.++++..|.... ..+.++++.+|.. .+..+.++++...+..
T Consensus 103 ~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~~ 149 (259)
T 1tzf_A 103 GDSSMTGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAHG 149 (259)
T ss_dssp CSSCCHHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHHC
T ss_pred ccccCcHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHhC
Confidence 34578888998888876 3577888889985 4567888888876544
No 70
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=73.92 E-value=8.2 Score=32.50 Aligned_cols=102 Identities=11% Similarity=-0.004 Sum_probs=57.7
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEE-EEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC---
Q 027065 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEV-LIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR--- 140 (229)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~ei-ivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~--- 140 (229)
.+++..+|.+|+.. +.++.+++.++ .+..-+ |-+|-.+++...+.+++....++ ++.++....
T Consensus 83 ~~kiAflil~h~d~----~~l~rll~~ly-------~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~--NV~v~~~~~~v~ 149 (391)
T 2gak_A 83 GFPIAYSIVVHHKI----EMLDRLLRAIY-------MPQNFYCIHVDRKAEESFLAAVQGIASCFD--NVFVASQLESVV 149 (391)
T ss_dssp TSCEEEEEEECSCH----HHHHHHHHHHC-------CTTSEEEEEECTTSCHHHHHHHHHHHHTCT--TEEECSSCCCCC
T ss_pred CCCEEEEEEecCCH----HHHHHHHHHHh-------CCCCeEEEEEeCCCCHHHHHHHHHHHhcCC--CEEEeccCcccc
Confidence 35699999998754 44566666443 223444 44555555555555555555566 888873222
Q ss_pred CCC--HHHH----HHHHHHhc-CCCEEEEEcCCCCC--ChhhHHHHHH
Q 027065 141 NHG--KGEA----IRKGMLHS-RGELLLMLDADGAT--KVTDLEKLES 179 (229)
Q Consensus 141 ~~g--k~~a----~n~gl~~a-~~d~v~~lD~D~~~--~~~~l~~l~~ 179 (229)
+.| ...| +..+++.. ..+|++.+-+.|.+ +.+.+.+.+.
T Consensus 150 WGg~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~ 197 (391)
T 2gak_A 150 YASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLK 197 (391)
T ss_dssp TTSHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHH
Confidence 333 2233 33344333 56899888887776 3444444443
No 71
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=73.25 E-value=5.7 Score=31.96 Aligned_cols=97 Identities=14% Similarity=0.124 Sum_probs=58.5
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCCHHHH
Q 027065 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (229)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~~~~~gk~~a 147 (229)
++|.++. .-|...++.+.. ..--+|+||...... +.++++... +. ..+.++..+...|.+.+
T Consensus 28 llpi~gk-pli~~~l~~l~~----------~gi~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (296)
T 1mc3_A 28 LLPIYDK-PMIYYPLSVLML----------AGIREILIITTPEDK---GYFQRLLGDGSEFG-IQLEYAEQPSPDGLAQA 92 (296)
T ss_dssp GSEETTE-ETTHHHHHHHHH----------TTCCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCSTHH
T ss_pred eeEECCe-eHHHHHHHHHHh----------CCCCcEEEEechhHH---HHHHHHHhcccccC-ceEEEeccCCCCCHHHH
Confidence 3455554 667777777765 113478777542221 223333332 22 13556666666788888
Q ss_pred HHHHHHhcCC-CEEEEEcCCCCCChhhHHHHHHHHHH
Q 027065 148 IRKGMLHSRG-ELLLMLDADGATKVTDLEKLESQIHA 183 (229)
Q Consensus 148 ~n~gl~~a~~-d~v~~lD~D~~~~~~~l~~l~~~~~~ 183 (229)
+..|++.... ++++++ +|..+.+..+.++++...+
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (296)
T 1mc3_A 93 FIIGETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVAA 128 (296)
T ss_dssp HHHTHHHHTTSCEEEEE-TTEEEECSSCHHHHHHHTT
T ss_pred HHHHHHHhCCCCEEEEE-CCccccccCHHHHHHHHHH
Confidence 8888887654 566655 8887655678888877643
No 72
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=65.42 E-value=13 Score=28.41 Aligned_cols=52 Identities=8% Similarity=0.051 Sum_probs=41.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCC-CChhhHHHHHHHHHHhC
Q 027065 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (229)
Q Consensus 132 ~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~ 185 (229)
.+.++.. ..|...++..|++....++++++++|.. ++++.+.++++.+.+.+
T Consensus 83 ~v~~~~~--~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 83 GAVFLEG--GATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp SCEEEEC--CSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred CcEEEeC--CCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 4555542 3467888999999888899999999974 68999999999887653
No 73
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=58.97 E-value=33 Score=25.56 Aligned_cols=45 Identities=20% Similarity=0.284 Sum_probs=37.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCC-ChhhHHHHHH
Q 027065 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEKLES 179 (229)
Q Consensus 132 ~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~-~~~~l~~l~~ 179 (229)
.+.++..+ .|.+.++..|++.. .+.++++-+|... +++.+.++++
T Consensus 66 ~~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 EARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SSEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CCEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 46777765 78899999999877 6889999999986 8888988887
No 74
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=58.03 E-value=9.8 Score=30.73 Aligned_cols=78 Identities=19% Similarity=0.110 Sum_probs=47.8
Q ss_pred CCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCC--------CC---H-HHHHHHHHHh-cCCCEEEEEcCC
Q 027065 100 KSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN--------HG---K-GEAIRKGMLH-SRGELLLMLDAD 166 (229)
Q Consensus 100 ~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~--------~g---k-~~a~n~gl~~-a~~d~v~~lD~D 166 (229)
+..++.++|++|+-+++..+.+++....+. ..++++..+.. .+ . ...+-...+. ...+-|+++|+|
T Consensus 27 ~~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~ll~~~~kvlyLD~D 105 (311)
T 1g9r_A 27 PDTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDID 105 (311)
T ss_dssp TTSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSS
T ss_pred CCCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHHHhhhcCEEEEEcCC
Confidence 345789999999888888888888866654 25666654321 11 0 0111111222 246889999999
Q ss_pred CCCChhhHHHHHH
Q 027065 167 GATKVTDLEKLES 179 (229)
Q Consensus 167 ~~~~~~~l~~l~~ 179 (229)
..+..+ +.++.+
T Consensus 106 ~iv~~d-i~eL~~ 117 (311)
T 1g9r_A 106 VLVRDS-LTPLWD 117 (311)
T ss_dssp EEECSC-CHHHHT
T ss_pred eEeccC-HHHHhc
Confidence 998655 445544
No 75
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=56.21 E-value=35 Score=26.44 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=44.2
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcE-EEEEcCCCCCHHHHHHHHHHhc------CCCEEEEEcCCCCCChhhHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNV-RIILLGRNHGKGEAIRKGMLHS------RGELLLMLDADGATKVTDLEK 176 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i-~vi~~~~~~gk~~a~n~gl~~a------~~d~v~~lD~D~~~~~~~l~~ 176 (229)
-+++||-....+ ..+.+++...++..+.+ .++..+...|.+.|+..|+... ..+-++++.+|..+.+..+..
T Consensus 47 ~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 47 TPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp SCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCG
T ss_pred ceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHH
Confidence 466666544333 55556555444431233 3344456789999999998876 345688899998775444443
No 76
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=52.65 E-value=23 Score=27.49 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=39.1
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC--CCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR--NHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~--~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l 177 (229)
-+|+|+-+...+...+.+ +.+ .++++..++ ..|.+.++..|++... + ++++.+|..+..+.+.++
T Consensus 72 ~~i~vv~~~~~~~i~~~~----~~~---~~~iv~~~~~~~~g~~~al~~a~~~~~-~-~lv~~~D~~~~~~~~~~~ 138 (254)
T 1jyk_A 72 NDIIIIVGYLKEQFDYLK----EKY---GVRLVFNDKYADYNNFYSLYLVKEELA-N-SYVIDADNYLFKNMFRND 138 (254)
T ss_dssp CCEEEEECTTGGGGTHHH----HHH---CCEEEECTTTTTSCTHHHHHTTGGGCT-T-EEEEETTEEESSCCCCSC
T ss_pred CeEEEEeCCcHHHHHHHH----HhC---CcEEEECCCccCCCcHHHHHHHHHHCC-C-EEEEeCCcccCHHHHHHH
Confidence 467777654434333333 333 367777654 3577777777776653 4 567899988766655443
No 77
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=51.57 E-value=78 Score=24.10 Aligned_cols=68 Identities=9% Similarity=0.052 Sum_probs=39.6
Q ss_pred ceEEEEEECCCCc-chHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHH
Q 027065 103 TYEVLIIDDGSSD-GTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177 (229)
Q Consensus 103 ~~eiivvdd~s~d-~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l 177 (229)
+.||+.|--...| ...+.+ .++ ++.++..+...-+..++-..++..+-|++++.-=--.++++.+...
T Consensus 35 ~~~I~~Vis~~~~a~~l~~A----~~~---gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~ 103 (215)
T 3kcq_A 35 SVVISCVISNNAEARGLLIA----QSY---GIPTFVVKRKPLDIEHISTVLREHDVDLVCLAGFMSILPEKFVTDW 103 (215)
T ss_dssp SEEEEEEEESCTTCTHHHHH----HHT---TCCEEECCBTTBCHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHT
T ss_pred CcEEEEEEeCCcchHHHHHH----HHc---CCCEEEeCcccCChHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhc
Confidence 4787655443333 333333 333 4555553322112356777788888899988877777777776653
No 78
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=49.54 E-value=56 Score=25.72 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=49.3
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCC-CCChhhHHHHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQIH 182 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~-~~~~~~l~~l~~~~~ 182 (229)
-++++|++.........+.+..++.+ -.+.++....-.. ..-...++|.|++.|... .+.++.++.+.+..+
T Consensus 5 ~~vLiV~g~~~~~~a~~l~~aL~~~g-~~V~~i~~~~~~~------~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~ 77 (259)
T 3rht_A 5 TRVLYCGDTSLETAAGYLAGLMTSWQ-WEFDYIPSHVGLD------VGELLAKQDLVILSDYPAERMTAQAIDQLVTMVK 77 (259)
T ss_dssp -CEEEEESSCTTTTHHHHHHHHHHTT-CCCEEECTTSCBC------SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHH
T ss_pred ceEEEECCCCchhHHHHHHHHHHhCC-ceEEEeccccccc------ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHH
Confidence 36788865444445555665555544 1355555432111 113456899999988664 578888999999888
Q ss_pred HhCCcceeec
Q 027065 183 AVGRKEYNHG 192 (229)
Q Consensus 183 ~~~~~~~~~~ 192 (229)
++.......|
T Consensus 78 ~GGgLi~~gG 87 (259)
T 3rht_A 78 AGCGLVMLGG 87 (259)
T ss_dssp TTCEEEEECS
T ss_pred hCCeEEEecC
Confidence 7655444333
No 79
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=38.24 E-value=18 Score=29.98 Aligned_cols=86 Identities=13% Similarity=0.144 Sum_probs=49.6
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-CCCHHHHHHH
Q 027065 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-NHGKGEAIRK 150 (229)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-~~gk~~a~n~ 150 (229)
+|..+. .-++.+++.+.+ . .--+|+|+-+.. ..+.+.+ ... .+.++..++ ..|...++..
T Consensus 26 l~i~g~-pli~~~l~~l~~--------~--~~~~i~vv~~~~---i~~~~~~---~~~--~i~~~~~~~~~~g~~~~l~~ 86 (401)
T 2ggo_A 26 VPILSK-PLIEYQIEYLRK--------C--GIRDITVIVSSK---NKEYFEK---KLK--EISIVTQKDDIKGTGAAILS 86 (401)
T ss_dssp CEETTE-EHHHHHHHHHHH--------T--TCCEEEEEECGG---GHHHHHH---HCT--TCEEEECCTTCCBSTTTGGG
T ss_pred eeECCE-eHHHHHHHHHHH--------C--CCCEEEEEeCHH---HHHHhhc---cCC--cEEEEeCCCCCCChHHHHHH
Confidence 344343 566666666655 1 134777776532 3333322 222 477777655 4555544443
Q ss_pred HHHhcCCCEEEEEcCCCCCC-hhhHHHHHH
Q 027065 151 GMLHSRGELLLMLDADGATK-VTDLEKLES 179 (229)
Q Consensus 151 gl~~a~~d~v~~lD~D~~~~-~~~l~~l~~ 179 (229)
+.+ .+.++++.+|..+. +..+.++++
T Consensus 87 ~~~---~~~~lv~~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 87 AKF---NDEALIIYGDLFFSNEKEICNIIT 113 (401)
T ss_dssp CCC---SSEEEEEETTEEESCSHHHHHHTT
T ss_pred hcc---CCCEEEEeCccccccHHHHHHHHH
Confidence 332 68888999999876 677777776
No 80
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=30.40 E-value=1.3e+02 Score=24.43 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=14.5
Q ss_pred cCCCEEEEEcCCCCCChh
Q 027065 155 SRGELLLMLDADGATKVT 172 (229)
Q Consensus 155 a~~d~v~~lD~D~~~~~~ 172 (229)
...|-|+++|+|..+-.+
T Consensus 93 ~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 93 TQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCCCeEEEEeCCEEeccC
Confidence 457999999999987544
No 81
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=30.36 E-value=1.5e+02 Score=21.89 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=35.8
Q ss_pred ceEEEEEECCCCcc-hHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCC
Q 027065 103 TYEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGA 168 (229)
Q Consensus 103 ~~eiivvdd~s~d~-t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~ 168 (229)
.-.|++|||.-+-+ |...+.+..++.....+.+.. -..+..+... +.... +++.+.-.+.+
T Consensus 120 gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~---~v~~~~~~~~-l~~~~-~~v~~~~~~~f 181 (208)
T 1wd5_A 120 GRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAV---PVASPEAVER-LKARA-EVVALSVPQDF 181 (208)
T ss_dssp TSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEE---EEBCHHHHHH-HHTTS-EEEEEECCTTC
T ss_pred CCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEE---EEcCHHHHHH-hcccC-cEEEEecCcch
Confidence 56899999998665 666666665555533455544 1223344433 33444 88877655544
No 82
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=30.09 E-value=65 Score=25.33 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=14.6
Q ss_pred cCCCEEEEEcCCCCCChh
Q 027065 155 SRGELLLMLDADGATKVT 172 (229)
Q Consensus 155 a~~d~v~~lD~D~~~~~~ 172 (229)
...|=|+++|+|..+-.+
T Consensus 94 ~~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 94 TQYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCcceEEEEcCCEeeccC
Confidence 357999999999997554
No 83
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=28.99 E-value=1.5e+02 Score=20.90 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=14.7
Q ss_pred EEECCC--CcchHHHHHHHHHHcCCCcEEEEEc
Q 027065 108 IIDDGS--SDGTKRVAFDFVRKYTVDNVRIILL 138 (229)
Q Consensus 108 vvdd~s--~d~t~~~~~~~~~~~~~~~i~vi~~ 138 (229)
|+||.. .+.....++.+...++..++.++-.
T Consensus 39 vi~DyaHnP~si~a~l~al~~~~~~~riivvf~ 71 (163)
T 3mvn_A 39 VYDDFAHHPTAITATIDALRAKVGQQRILAVLE 71 (163)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHTTSCEEEEEC
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 666653 3333344444443344335555543
No 84
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=26.58 E-value=1.2e+02 Score=22.27 Aligned_cols=102 Identities=14% Similarity=0.201 Sum_probs=52.5
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCC
Q 027065 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNH 142 (229)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~ 142 (229)
.+.|+|.||+-...+.+..+++.+.+-. -..++|+-|+ |--.|.+.+.++.++.....++++..-.
T Consensus 10 ~~~P~V~IimGS~SD~~v~~~a~~~l~~---------~gi~~ev~V~---saHR~p~~l~~~~~~a~~~g~~ViIa~A-- 75 (173)
T 4grd_A 10 HSAPLVGVLMGSSSDWDVMKHAVAILQE---------FGVPYEAKVV---SAHRMPDEMFDYAEKARERGLRAIIAGA-- 75 (173)
T ss_dssp CSSCSEEEEESSGGGHHHHHHHHHHHHH---------TTCCEEEEEC---CTTTSHHHHHHHHHHHTTTTCSEEEEEE--
T ss_pred CCCCeEEEEeCcHhHHHHHHHHHHHHHH---------cCCCEEEEEE---ccccCHHHHHHHHHHHHhcCCeEEEEec--
Confidence 4568899999887776555554433332 2446888887 4455566666665554433454444321
Q ss_pred CHHHHHHHHH-HhcCCCEEEE-EcCCCCCChhhHHHHH
Q 027065 143 GKGEAIRKGM-LHSRGELLLM-LDADGATKVTDLEKLE 178 (229)
Q Consensus 143 gk~~a~n~gl-~~a~~d~v~~-lD~D~~~~~~~l~~l~ 178 (229)
|..+++--.+ ..+.-+.|.+ +.+...-.-|.|..++
T Consensus 76 G~aahLpgvvA~~t~~PVIgVPv~~~~l~G~dsLlSiv 113 (173)
T 4grd_A 76 GGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLHSIV 113 (173)
T ss_dssp ESSCCHHHHHHHHCCSCEEEEEECCTTTTTHHHHHHHH
T ss_pred cccccchhhheecCCCCEEEEEcCCCCCCchhHHHHHH
Confidence 1111221111 2345677766 3444333444444443
No 85
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=26.48 E-value=2.1e+02 Score=21.55 Aligned_cols=93 Identities=10% Similarity=0.103 Sum_probs=48.6
Q ss_pred EEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCc-chHHHHHHHHHHcCCCcEEEEEcC-CCC-CH
Q 027065 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSD-GTKRVAFDFVRKYTVDNVRIILLG-RNH-GK 144 (229)
Q Consensus 68 vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d-~t~~~~~~~~~~~~~~~i~vi~~~-~~~-gk 144 (229)
.-|.|-+-..... ++.++..... ...+.||..|--...+ ...+.+ .++ ++.++..+ ++. .+
T Consensus 8 ~ri~vl~SG~gsn----l~all~~~~~-----~~l~~~I~~Visn~~~a~~l~~A----~~~---gIp~~~~~~~~~~~r 71 (209)
T 4ds3_A 8 NRVVIFISGGGSN----MEALIRAAQA-----PGFPAEIVAVFSDKAEAGGLAKA----EAA---GIATQVFKRKDFASK 71 (209)
T ss_dssp EEEEEEESSCCHH----HHHHHHHHTS-----TTCSEEEEEEEESCTTCTHHHHH----HHT---TCCEEECCGGGSSSH
T ss_pred ccEEEEEECCcHH----HHHHHHHHHc-----CCCCcEEEEEEECCcccHHHHHH----HHc---CCCEEEeCccccCCH
Confidence 3444545555544 4444443321 2235777655433333 333333 333 45555433 222 22
Q ss_pred ---HHHHHHHHHhcCCCEEEEEcCCCCCChhhHHH
Q 027065 145 ---GEAIRKGMLHSRGELLLMLDADGATKVTDLEK 176 (229)
Q Consensus 145 ---~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~ 176 (229)
...+-..++..+-|++++.-=--.++++.+..
T Consensus 72 ~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~ 106 (209)
T 4ds3_A 72 EAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAP 106 (209)
T ss_dssp HHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhh
Confidence 24555667777889988887777777776654
No 86
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=25.32 E-value=2e+02 Score=22.95 Aligned_cols=64 Identities=13% Similarity=0.171 Sum_probs=41.9
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCC
Q 027065 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN 141 (229)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~ 141 (229)
+|-++.|.=.....+...++.-..... ...+.|+++.||++++ +.+..+++.++ ++.++..+-.
T Consensus 2 kIG~llplSG~~a~~G~~~~~G~~lA~------~G~~i~l~~~D~~~~~-a~~~~~~l~~~----~v~~IiGp~~ 65 (325)
T 2h4a_A 2 QIGLLLPLSGDGQILGTTIQSGFNDAK------GNSTIPVQVFDTSMNS-VQDIIAQAKQA----GIKTLVGPLL 65 (325)
T ss_dssp CEEEEECCSSTTHHHHHHHHHHHHHHH------TTCCSCEEEEETTTSC-HHHHHHHHHHT----TCCEEECCCS
T ss_pred cEEEEECCCCccHHHHHHHHHHHHHhc------cCCCceEEEEECCCCh-HHHHHHHHHHC----CCCEEEeeCC
Confidence 377777876666555555555443322 3558999999999965 66777776532 5777776643
No 87
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=24.55 E-value=1e+02 Score=24.43 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=20.4
Q ss_pred cCCCEEEEEcCCCCCChhhHHHHHHHHHHhCCcceeec
Q 027065 155 SRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHG 192 (229)
Q Consensus 155 a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~ 192 (229)
++.|.|++.-....+++.....+.+.++++...+..++
T Consensus 57 ~~~D~vV~~~~~~~l~~~~~~~l~~yV~~Ggglv~~H~ 94 (281)
T 4e5v_A 57 SPYQLVVLDYNGDSWPEETNRRFLEYVQNGGGVVIYHA 94 (281)
T ss_dssp TTCSEEEECCCSSCCCHHHHHHHHHHHHTTCEEEEEGG
T ss_pred hcCCEEEEeCCCCcCCHHHHHHHHHHHHcCCCEEEEec
Confidence 34565553332344566666666666666555544444
No 88
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=24.46 E-value=2.4e+02 Score=21.56 Aligned_cols=50 Identities=10% Similarity=0.145 Sum_probs=38.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHhc---CCCEEEEEcCCCCC-ChhhHHHHHHHHHH
Q 027065 133 VRIILLGRNHGKGEAIRKGMLHS---RGELLLMLDADGAT-KVTDLEKLESQIHA 183 (229)
Q Consensus 133 i~vi~~~~~~gk~~a~n~gl~~a---~~d~v~~lD~D~~~-~~~~l~~l~~~~~~ 183 (229)
+.+... ...|.+..++.|++.+ ..+-++++-+|... .+..|.++++.+.+
T Consensus 77 ~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 77 HMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp SEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred cEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 444333 4568999999999876 45789999999985 88889999887765
No 89
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=24.18 E-value=22 Score=28.35 Aligned_cols=29 Identities=17% Similarity=0.086 Sum_probs=25.0
Q ss_pred cCCCEEEEEcCCCCCChhhHHHHHHHHHH
Q 027065 155 SRGELLLMLDADGATKVTDLEKLESQIHA 183 (229)
Q Consensus 155 a~~d~v~~lD~D~~~~~~~l~~l~~~~~~ 183 (229)
...+|+++.|+|+.+..+-|.+++..+..
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~ 120 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTFPQ 120 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTSCT
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhCCC
Confidence 47899999999999999988888887643
No 90
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.13 E-value=1.1e+02 Score=24.06 Aligned_cols=45 Identities=9% Similarity=0.113 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHhcC--------CCEEEEEcCCCCCChhhHHHHHHHHHHhC
Q 027065 141 NHGKGEAIRKGMLHSR--------GELLLMLDADGATKVTDLEKLESQIHAVG 185 (229)
Q Consensus 141 ~~gk~~a~n~gl~~a~--------~d~v~~lD~D~~~~~~~l~~l~~~~~~~~ 185 (229)
......++..|+...+ ..+|+|+|+|...+++.+.++.+.+.+..
T Consensus 84 ~T~l~~gL~~A~~aLk~~~~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~g 136 (268)
T 4b4t_W 84 KLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNN 136 (268)
T ss_dssp CCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhcccCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcC
Confidence 3446777777776542 25899999999999999999999998866
No 91
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=22.88 E-value=67 Score=21.99 Aligned_cols=70 Identities=11% Similarity=0.025 Sum_probs=38.5
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhc-CCCEEEEEcCCCCCChhhHHHHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS-RGELLLMLDADGATKVTDLEKLESQIH 182 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a-~~d~v~~lD~D~~~~~~~l~~l~~~~~ 182 (229)
--||+..|.+.......+..++.++. +.++....+ ..+-.++-.. .--.+.++|.++ ..+.+.++...++
T Consensus 49 ~lViiA~D~~p~~~~~~l~~lc~~~~---VP~~~v~sk----~eLG~a~Gk~~~vs~vaI~d~~~--~~~~~~~~~~~i~ 119 (122)
T 3o85_A 49 ELVIIAADADPIEIVLHLPLACEDKG---VPYVFIGSK----NALGRACNVSVPTIVASIGKHDA--LGNVVAEIVGKVE 119 (122)
T ss_dssp SEEEEETTCSSGGGGTTHHHHHHTTT---CCEEEESCH----HHHHHHTTCSSCCSEEEECCCTT--THHHHHHHHHHHH
T ss_pred eEEEEeCCCChHHHHHHHHHHHHHhC---CCEEEECCH----HHHHHHhCCCCCEEEEEEEcccc--hHHHHHHHHHHHH
Confidence 34555566655554566666666654 445444321 2233333222 235689999988 4556666665554
No 92
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=22.76 E-value=1.3e+02 Score=22.21 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=39.6
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEc
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILL 138 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~ 138 (229)
..|.|.||+-.-.+.+..+++.+-+ .+ -..++|+-|+ |--.|.+.+.++.++....+++++..
T Consensus 21 mkp~V~IimGS~SD~~v~~~a~~~L----~~-----~gI~~e~~V~---SAHRtp~~l~~~~~~a~~~g~~ViIa 83 (181)
T 4b4k_A 21 MKSLVGVIMGSTSDWETMKYACDIL----DE-----LNIPYEKKVV---SAHRTPDYMFEYAETARERGLKVIIA 83 (181)
T ss_dssp -CCSEEEEESSGGGHHHHHHHHHHH----HH-----TTCCEEEEEC---CTTTSHHHHHHHHHHTTTTTCCEEEE
T ss_pred CCccEEEEECCHhHHHHHHHHHHHH----HH-----cCCCeeEEEE---ccccChHHHHHHHHHHHhcCceEEEE
Confidence 4577999998877765555443333 32 3457898887 44566777777776665445666654
No 93
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=22.61 E-value=1.9e+02 Score=19.79 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=41.2
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHH----------HhcCCCEEEEEcCCCCCChhh
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGM----------LHSRGELLLMLDADGATKVTD 173 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl----------~~a~~d~v~~lD~D~~~~~~~ 173 (229)
.-+|+..|.++..+...+..++..+. +.++..+.+.-.+.+ .|. +....-.+++.|....-+...
T Consensus 42 ~LViiA~D~~p~~~~~~i~~lc~~~~---Ip~~~v~sk~~LG~a--~G~~k~d~~g~~rk~v~~s~vaI~d~g~~~~~~~ 116 (126)
T 2xzm_U 42 LFVCVAEDCDQGNYVKLVKALCAKNE---IKYVSVPKRASLGEY--LGHFTANAKGEIKKVKGCSSLAIRKYAPEITEDE 116 (126)
T ss_dssp SEEEEESSCCSTTHHHHHHHHHHHTT---CCEEEESCSHHHHHH--HTCCCBCTTCCBSCCCCCCEEEESSCCTTCCHHH
T ss_pred eEEEEeCCCChHHHHHHHHHHHHHhC---CCEEEECCHHHHHHH--HCCCccccccCcCceeeEEEEEEEecCcccCHHH
Confidence 34555566667788888888888865 545544433222222 222 111245678888776655556
Q ss_pred HHHHHHH
Q 027065 174 LEKLESQ 180 (229)
Q Consensus 174 l~~l~~~ 180 (229)
+..+++.
T Consensus 117 ~~~l~~~ 123 (126)
T 2xzm_U 117 KKIIEGA 123 (126)
T ss_dssp HHHHTTS
T ss_pred HHHHHHH
Confidence 6666544
No 94
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=21.27 E-value=2e+02 Score=19.43 Aligned_cols=82 Identities=10% Similarity=0.026 Sum_probs=44.3
Q ss_pred CCceEEEEEECC---CCcchHHHHHHHHHHcCCCcEEEEEcCCC-CCHHHHHHHHHHhcCCCEEEEEcCCC--------C
Q 027065 101 SFTYEVLIIDDG---SSDGTKRVAFDFVRKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADG--------A 168 (229)
Q Consensus 101 ~~~~eiivvdd~---s~d~t~~~~~~~~~~~~~~~i~vi~~~~~-~gk~~a~n~gl~~a~~d~v~~lD~D~--------~ 168 (229)
...++++.|+-. .++.+.+.++++.++++.. ..++..... .+....+...+.....+.++++|.|. .
T Consensus 62 ~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~ 140 (160)
T 3lor_A 62 ESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK-FPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQ 140 (160)
T ss_dssp TTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC-SCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESC
T ss_pred cCCcEEEEEeccccccccCCHHHHHHHHHHcCCC-CcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCc
Confidence 345899888732 1235677778887777632 333333222 11111122223333457788888774 3
Q ss_pred CChhhHHHHHHHHHH
Q 027065 169 TKVTDLEKLESQIHA 183 (229)
Q Consensus 169 ~~~~~l~~l~~~~~~ 183 (229)
.+++.+.+.++.+-+
T Consensus 141 ~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 141 VDDFVLGLLLGSLLS 155 (160)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHh
Confidence 456667777666644
No 95
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=20.21 E-value=1.1e+02 Score=25.25 Aligned_cols=67 Identities=19% Similarity=0.286 Sum_probs=39.6
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhhcCCCceEEEEEECCCC-cchHHHHHHHHHHcCCCcEEEEEcC
Q 027065 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSS-DGTKRVAFDFVRKYTVDNVRIILLG 139 (229)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~~~~i~vi~~~ 139 (229)
..+.-++|+-++|++ +...++|+.. +..+.. ...++..++++|..- ++-.+.+..+. . ..+++...+
T Consensus 25 ~r~nAtfV~L~RN~e--l~~~l~Si~~-vE~rFN--~~y~YpwvFlNd~pFteeFk~~~~~~~---s-g~v~Fg~Ip 92 (348)
T 1s4n_A 25 GKPKACYVTLVRNKE--LKGLLSSIKY-VENKIN--KKFPYPWVFLNDEPFTEEFKEAVTKAV---S-SEVKFGILP 92 (348)
T ss_dssp SCCCEEEEEECCGGG--HHHHHHHHHH-HHHHTT--TTSCCCEEEEESSCCCHHHHHHHHHHC---S-SCEEEEECC
T ss_pred CCCceEEEEEeccHH--HHHHHHHHHH-HHHHhh--ccCCCCEEEecCCCCCHHHHHHHHHhc---C-cceEEEEcC
Confidence 456799999999986 4554544433 333221 245788999999874 33444444443 2 256665443
No 96
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=20.19 E-value=2e+02 Score=22.57 Aligned_cols=74 Identities=16% Similarity=0.071 Sum_probs=43.9
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHhcCCCEEEEEcCCCCCChhhHHHHHHHHHH
Q 027065 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHA 183 (229)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~gk~~a~n~gl~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~ 183 (229)
--|||..|.+.-.....+..++.++. +.++....+.- +-.++-.-..-.++++|....- .+.+..+++.+..
T Consensus 149 kLVVIA~DadP~eivk~LpaLC~k~g---VPy~~V~sK~e----LG~A~Gkk~~s~VAItD~g~eD-k~al~kLve~ikt 220 (256)
T 3izc_H 149 KLVLIANDVDPIELVVFLPALCKKMG---VPYAIVKGKAR----LGTLVNQKTSAVAALTEVRAED-EAALAKLVSTIDA 220 (256)
T ss_dssp SEEEEESCCSSGGGTTHHHHHHHHHT---CCEEEESCHHH----HHHHTTCSSCCSEEEESSCCSC-CHHHHHHHHHHHH
T ss_pred eEEEEeCCCChHHHHHHHHHHHHhcC---CCEEEECCHHH----HHHHhCCCCcEEEEeecCChhh-HHHHHHHHHHHHh
Confidence 34555666555555566677777765 55554443211 2222222245668889887643 3779999999986
Q ss_pred hC
Q 027065 184 VG 185 (229)
Q Consensus 184 ~~ 185 (229)
+-
T Consensus 221 ny 222 (256)
T 3izc_H 221 NF 222 (256)
T ss_dssp HC
T ss_pred hh
Confidence 53
Done!