BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027066
MAMSVSIVAVVTALHLIAFVFAVGAERRRSTVLFTHSILYIHKFFENYLSFSGSLIFWVF
LCLKAKVVPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGT
SSTTWAVFFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFGGGDLSCATLRKGVFAAGA
ALTLLSLAGSILYYWAHTRADTGGWEKHRNEGLGMAMQQQQPGNDFEKA

High Scoring Gene Products

Symbol, full name Information P value
AT1G68220 protein from Arabidopsis thaliana 1.1e-64
AT1G13380 protein from Arabidopsis thaliana 3.8e-31
AT1G61065 protein from Arabidopsis thaliana 4.8e-31
AT4G27435 protein from Arabidopsis thaliana 8.6e-30
AT1G52910 protein from Arabidopsis thaliana 2.3e-29
AT3G15480 protein from Arabidopsis thaliana 3.7e-29
AT5G17210 protein from Arabidopsis thaliana 2.7e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027066
        (229 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2199332 - symbol:AT1G68220 "AT1G68220" species...   552  1.1e-64   2
TAIR|locus:2009922 - symbol:AT1G13380 "AT1G13380" species...   291  3.8e-31   2
TAIR|locus:505006194 - symbol:AT1G61065 "AT1G61065" speci...   298  4.8e-31   2
TAIR|locus:505006522 - symbol:AT4G27435 "AT4G27435" speci...   280  8.6e-30   2
TAIR|locus:2011556 - symbol:AT1G52910 "AT1G52910" species...   290  2.3e-29   2
TAIR|locus:2090156 - symbol:AT3G15480 "AT3G15480" species...   287  3.7e-29   2
TAIR|locus:2167200 - symbol:AT5G17210 "AT5G17210" species...   144  2.7e-09   1


>TAIR|locus:2199332 [details] [associations]
            symbol:AT1G68220 "AT1G68220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            EMBL:AC016447 InterPro:IPR009606 Pfam:PF06749 HOGENOM:HOG000241124
            EMBL:AY042901 EMBL:AY072476 EMBL:AY086320 IPI:IPI00524768
            PIR:F96705 RefSeq:NP_564925.1 UniGene:At.18268 IntAct:Q9C9F7
            STRING:Q9C9F7 PaxDb:Q9C9F7 PRIDE:Q9C9F7 EnsemblPlants:AT1G68220.1
            GeneID:843151 KEGG:ath:AT1G68220 TAIR:At1g68220 eggNOG:NOG294680
            InParanoid:Q9C9F7 OMA:DERTYCV PhylomeDB:Q9C9F7
            ProtClustDB:CLSN2689083 Genevestigator:Q9C9F7 Uniprot:Q9C9F7
        Length = 201

 Score = 552 (199.4 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
 Identities = 101/150 (67%), Positives = 115/150 (76%)

Query:    68 VPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSSTTWAV 127
             VPDQYDE T C Y T+ASTVYG+SAFGLLL+SQAVVNGVT+CLCFGKGLVTGTS T WA+
Sbjct:    35 VPDQYDEKTICKYGTEASTVYGMSAFGLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAI 94

Query:   128 FFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFGGGDLSCATLRKGVFXXXXXXXXXXX 187
              FF+VSWVSFLGAEACLL GSARNAYHTK   I+ G +LSCA L  GVF           
Sbjct:    95 VFFVVSWVSFLGAEACLLGGSARNAYHTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSL 154

Query:   188 XXXXXYYWAHTRADTGGWEKHRNEGLGMAM 217
                  YY AH++ADTGGWEKH+N+G+ + M
Sbjct:   155 IATILYYLAHSKADTGGWEKHQNDGINIGM 184

 Score = 125 (49.1 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
 Identities = 26/33 (78%), Positives = 30/33 (90%)

Query:     1 MAMSVSIVAVVTALHLIAFVFAVGAERRRSTVL 33
             MA+SVSI+ VVTALHL+AFVFA GAERRRST +
Sbjct:     1 MAVSVSILTVVTALHLLAFVFAFGAERRRSTAV 33


>TAIR|locus:2009922 [details] [associations]
            symbol:AT1G13380 "AT1G13380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC011810 InterPro:IPR009606
            Pfam:PF06749 HOGENOM:HOG000241124 EMBL:AY088291 EMBL:AY136444
            EMBL:BT000232 IPI:IPI00533349 RefSeq:NP_563929.1 UniGene:At.42034
            PRIDE:Q9FX59 EnsemblPlants:AT1G13380.1 GeneID:837898
            KEGG:ath:AT1G13380 TAIR:At1g13380 eggNOG:NOG302951
            InParanoid:Q9FX59 OMA:RAWSIIY PhylomeDB:Q9FX59
            ProtClustDB:CLSN2687792 ArrayExpress:Q9FX59 Genevestigator:Q9FX59
            Uniprot:Q9FX59
        Length = 188

 Score = 291 (107.5 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 55/135 (40%), Positives = 80/135 (59%)

Query:    66 KVVPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSSTTW 125
             K + D     T+CVY +D +T YG+ AF  LL S++++  VT+C+CFG+ L  G S   W
Sbjct:    36 KSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSESLLMSVTKCMCFGRPLAPG-SDRAW 94

Query:   126 AVFFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFGGGDLSCATLRKGVFXXXXXXXXX 185
             ++ +FI SW++FL AEAC++AG+ +NAYHTKY         SCA+LRKG+F         
Sbjct:    95 SIIYFISSWMTFLVAEACVIAGATKNAYHTKY---LSSQTFSCASLRKGIFIAGAVFIVA 151

Query:   186 XXXXXXXYYWAHTRA 200
                    YY   T++
Sbjct:   152 TMVLNVYYYMYFTKS 166

 Score = 67 (28.6 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query:     4 SVSIVAVVTALHLIAFVFAVGAERRRS 30
             S  +  +V AL L+AF F++ AERRRS
Sbjct:     7 STLVFILVVALSLVAFGFSIAAERRRS 33


>TAIR|locus:505006194 [details] [associations]
            symbol:AT1G61065 "AT1G61065" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 UniGene:At.52296
            InterPro:IPR009606 Pfam:PF06749 EMBL:AF419584 EMBL:AY079109
            IPI:IPI00539358 RefSeq:NP_564769.1 UniGene:At.27389 PRIDE:Q8W576
            EnsemblPlants:AT1G61065.1 GeneID:842398 KEGG:ath:AT1G61065
            TAIR:At1g61065 InParanoid:Q8W576 OMA:ASQLLIM PhylomeDB:Q8W576
            ProtClustDB:CLSN2917340 Genevestigator:Q8W576 Uniprot:Q8W576
        Length = 180

 Score = 298 (110.0 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
 Identities = 61/143 (42%), Positives = 84/143 (58%)

Query:    74 EMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSSTTWAVFFFIVS 133
             +++YCVY  D +T  G+ +F +LL SQ ++   +RCLC G+ L T + S +WA+F FI +
Sbjct:    39 DLSYCVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRAL-TPSGSRSWAIFLFITT 97

Query:   134 WVSFLGAEACLLAGSARNAYHTKYRKIFGGGDLSCATLRKGVFXXXXXXXXXXXXXXXXY 193
             WV F  A+ CLLAGS RNAYHTKYR  FG    SC +LRKGVF                Y
Sbjct:    98 WVFFFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELY 157

Query:   194 YWAHTRADTGGWEKHRNEGLGMA 216
             Y   +RA    ++  R+ G+ M+
Sbjct:   158 YVTLSRAKD--FQPSRDPGIRMS 178

 Score = 59 (25.8 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query:     4 SVSIVAVVTALHLIAFVFAVGAERRRST 31
             SV ++ +V    LIAF  AV AE+RR+T
Sbjct:     3 SVLLLLLVFVFDLIAFGLAVAAEQRRTT 30


>TAIR|locus:505006522 [details] [associations]
            symbol:AT4G27435 "AT4G27435" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0010413 "glucuronoxylan
            metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
            process" evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR
            InterPro:IPR009606 Pfam:PF06749 EMBL:AY054257 EMBL:AF458340
            IPI:IPI00538428 RefSeq:NP_567774.1 UniGene:At.26388 STRING:Q940M6
            EnsemblPlants:AT4G27435.1 GeneID:828852 KEGG:ath:AT4G27435
            TAIR:At4g27435 eggNOG:NOG307800 HOGENOM:HOG000241124
            InParanoid:Q940M6 OMA:ENAYHTK PhylomeDB:Q940M6
            ProtClustDB:CLSN2917620 Genevestigator:Q940M6 Uniprot:Q940M6
        Length = 173

 Score = 280 (103.6 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 61/136 (44%), Positives = 75/136 (55%)

Query:    65 AKVVPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSSTT 124
             A+VV D   +  YCVY +D +T YG+ AF   + SQ ++  V+RC C GK L  G  S  
Sbjct:    31 ARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVASQILIMLVSRCFCCGKPLKPG-GSRA 89

Query:   125 WAVFFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFGGGDLSCATLRKGVFXXXXXXXX 184
              A+  FIVSW+ FL AE CLLAGS  NAYHTKYR +F      C TLRKGVF        
Sbjct:    90 LALILFIVSWMFFLIAEICLLAGSVENAYHTKYRTMFMDNPPDCQTLRKGVFAAGASFVF 149

Query:   185 XXXXXXXXYYWAHTRA 200
                     YY+ +  A
Sbjct:   150 FNAIVSQFYYFFYFSA 165

 Score = 65 (27.9 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 17/30 (56%), Positives = 21/30 (70%)

Query:     3 MSVSIV-AVVTALHLIAFVFAVGAERRRST 31
             M+  IV A+V   +LIAF  AV AE+RRST
Sbjct:     1 MASKIVSAIVFVFNLIAFGLAVAAEQRRST 30


>TAIR|locus:2011556 [details] [associations]
            symbol:AT1G52910 "AT1G52910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC019018 InterPro:IPR009606
            Pfam:PF06749 UniGene:At.37503 UniGene:At.66935 HOGENOM:HOG000241124
            EMBL:BT010633 EMBL:AK175394 EMBL:AK175652 IPI:IPI00544185
            PIR:D96570 RefSeq:NP_564617.1 PRIDE:Q9C930
            EnsemblPlants:AT1G52910.1 GeneID:841724 KEGG:ath:AT1G52910
            TAIR:At1g52910 eggNOG:NOG266780 InParanoid:Q9C930 OMA:VIIMVAS
            PhylomeDB:Q9C930 ProtClustDB:CLSN2688408 ArrayExpress:Q9C930
            Genevestigator:Q9C930 Uniprot:Q9C930
        Length = 175

 Score = 290 (107.1 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 61/144 (42%), Positives = 77/144 (53%)

Query:    66 KVVPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSSTTW 125
             KVVPD   E  +C Y +D +T YG  AF LL ISQ ++   +RC C GK L  G  S   
Sbjct:    32 KVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFISQVIIMVASRCFCCGKALKPG-GSRAC 90

Query:   126 AVFFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFG-GGDLSCATLRKGVFXXXXXXXX 184
              +  F++ WV FL AE CLLAGS RNAYHT YR+++      SC  +RKGVF        
Sbjct:    91 GIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRRMWNIENPPSCEVIRKGVFAAGASFAL 150

Query:   185 XXXXXXXXYYWAHTRADTGGWEKH 208
                     YY +++RA  G    H
Sbjct:   151 FTAIVSQFYYISYSRARDGYQTPH 174

 Score = 51 (23.0 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query:     7 IVAVVTALHLIAFVFAVGAERRRS 30
             ++ +V  L LIA   A+ AE+RRS
Sbjct:     6 VIIIVFILDLIAVGLAIAAEQRRS 29


>TAIR|locus:2090156 [details] [associations]
            symbol:AT3G15480 "AT3G15480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0005886
            GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB022218
            EMBL:AC024081 UniGene:At.20829 InterPro:IPR009606 Pfam:PF06749
            HOGENOM:HOG000241124 eggNOG:NOG266780 ProtClustDB:CLSN2688408
            EMBL:AY057569 EMBL:AY090318 EMBL:AY086195 IPI:IPI00518348
            RefSeq:NP_566516.1 PaxDb:Q9LDK1 PRIDE:Q9LDK1
            EnsemblPlants:AT3G15480.1 GeneID:820787 KEGG:ath:AT3G15480
            TAIR:At3g15480 InParanoid:Q9LDK1 OMA:ARDAYQN PhylomeDB:Q9LDK1
            Genevestigator:Q9LDK1 Uniprot:Q9LDK1
        Length = 175

 Score = 287 (106.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 60/136 (44%), Positives = 76/136 (55%)

Query:    66 KVVPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSSTTW 125
             KV  D+  +  YCVY TD +T YG  AF LL +SQ ++   +RC C GK L  G  S   
Sbjct:    32 KVETDRDKQYDYCVYGTDIATSYGAGAFVLLFVSQVLIMAASRCFCCGKSLNPG-GSRAC 90

Query:   126 AVFFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFGGGDL-SCATLRKGVFXXXXXXXX 184
             A+  F++ WV FL AE CLLA S RNAYHT+YRK++   D  SC  +RKGVF        
Sbjct:    91 AIILFLICWVFFLIAEMCLLAASIRNAYHTQYRKMWKVEDPPSCEVIRKGVFAAGAAFTL 150

Query:   185 XXXXXXXXYYWAHTRA 200
                     YY  ++RA
Sbjct:   151 FTAIVSQFYYVCYSRA 166

 Score = 52 (23.4 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query:     7 IVAVVTALHLIAFVFAVGAERRRS 30
             +V +V  L LIA   A+ AE+RRS
Sbjct:     6 VVIIVFILDLIAVGLAIAAEQRRS 29


>TAIR|locus:2167200 [details] [associations]
            symbol:AT5G17210 "AT5G17210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR009606 Pfam:PF06749
            EMBL:AY035178 EMBL:AY113930 IPI:IPI00516934 RefSeq:NP_568343.1
            UniGene:At.8366 PaxDb:Q94C50 PRIDE:Q94C50 EnsemblPlants:AT5G17210.1
            GeneID:831585 KEGG:ath:AT5G17210 TAIR:At5g17210 eggNOG:NOG255354
            HOGENOM:HOG000239076 InParanoid:Q94C50 OMA:HEDTYMR PhylomeDB:Q94C50
            ProtClustDB:CLSN2689735 ArrayExpress:Q94C50 Genevestigator:Q94C50
            Uniprot:Q94C50
        Length = 209

 Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 41/158 (25%), Positives = 70/158 (44%)

Query:    64 KAKVVPDQYDEMTYCVYSTDASTVYGLSAFGLLLISQAVVNGVTRCLCFGKGLVTGTSST 123
             +++V     D +T C Y    +   G ++   L+++Q +V+  + C C  KG     S+ 
Sbjct:    33 RSQVTVTVSDSITKCTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNW 92

Query:   124 TWAVFFFIVSWVSFLGAEACLLAGSARNAYHTKYRKIFGGGDLSCATLRKGVFXXXXXXX 183
               ++  F+VSW +F+ A   LL+G+A N  HT+  +    G   C  ++ GVF       
Sbjct:    93 IISLICFVVSWFTFVIAFLVLLSGAALNDEHTE--ESMNAGTYFCYIVKPGVFSTGAVLS 150

Query:   184 XXXXXXXXXYYWAHTRADTGGWEKHRNEGLGMAMQQQQ 221
                      YY   T ++         +G G+AM Q Q
Sbjct:   151 LVTIALGIVYYLCLT-SNKQIVAATTTQGTGIAMGQPQ 187


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.137   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      229       213   0.00084  112 3  11 22  0.41    32
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  186 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.57u 0.10s 16.67t   Elapsed:  00:00:00
  Total cpu time:  16.57u 0.10s 16.67t   Elapsed:  00:00:00
  Start:  Mon May 20 20:34:56 2013   End:  Mon May 20 20:34:56 2013

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