BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027071
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 165/227 (72%), Positives = 201/227 (88%), Gaps = 2/227 (0%)
Query: 1 MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
+E LVAPI E+HK+ALDGK T +++K+ P GGCR+EGYVRVKKVPGNL+ISA S
Sbjct: 258 VEGLVAPIH-PETHKVALDGKSNDTVKHLKK-GPVTGGCRVEGYVRVKKVPGNLVISAHS 315
Query: 61 GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
GAHSFD+S+MNMSHV+SH SFGR +SP++++D++RL+PYLG SHDRL+G++FIN E GA
Sbjct: 316 GAHSFDSSQMNMSHVVSHFSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGA 375
Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
NVTIEHYLQ VKTEVITRR +EHSL+EEYEYTAHSS+ Q+ Y+P AKFHFELSPMQ++I
Sbjct: 376 NVTIEHYLQTVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQILI 435
Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
TE+PKSFSHFITN+CAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct: 436 TENPKSFSHFITNLCAIIGGVFTVAGILDSIFHNTVRLVKKVELGKN 482
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 322 bits (825), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 189/225 (84%), Gaps = 5/225 (2%)
Query: 4 LVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAH 63
LV PI LE H LAL+ K ++ +K+ AP GGCR+EGY+RVKKVPGNL++SARSG+H
Sbjct: 261 LVEPIHLEP-HNLALEDKSDNSSRTLKK-APSTGGCRVEGYMRVKKVPGNLMVSARSGSH 318
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
SFD+S+MNMSHV++HLSFGR++ P+ S+ +RL PYLG SHDRL+GRSFIN R++G NVT
Sbjct: 319 SFDSSQMNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVT 378
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITED 183
IEHYLQIVKTEV+ S +L+E YEYTAHSS+ S Y+P AKFHFELSPMQV+ITE+
Sbjct: 379 IEHYLQIVKTEVVK---SNGQALVEAYEYTAHSSVAHSYYLPVAKFHFELSPMQVLITEN 435
Query: 184 PKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
KSFSHFITNVCAIIGGVFTVAGILD+ILH++M LMKK+E+GKNF
Sbjct: 436 SKSFSHFITNVCAIIGGVFTVAGILDSILHHSMTLMKKIELGKNF 480
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 317 bits (812), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/228 (66%), Positives = 189/228 (82%), Gaps = 2/228 (0%)
Query: 1 MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
ME VA IP +++H LAL+ K T + KRPAP GCRIEG+VRVKKVPG+++ISARS
Sbjct: 258 METYVANIP-KDAHVLALEDKSNKTVDPAKRPAPLTSGCRIEGFVRVKKVPGSVVISARS 316
Query: 61 GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFI-NHREVG 119
G+HSFD S++N+SH ++ SFG++LS K+ ++++RL PY+GG HDRL G+S+I H +V
Sbjct: 317 GSHSFDPSQINVSHYVTQFSFGKRLSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVN 376
Query: 120 ANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVV 179
ANVTIEHYLQIVKTE++T R S+E L+EEYEYTAHSSLV S Y+P KFHFE SPMQV+
Sbjct: 377 ANVTIEHYLQIVKTELVTLRSSKELKLVEEYEYTAHSSLVHSFYVPVVKFHFEPSPMQVL 436
Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
+TE PKSFSHFITNVCAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct: 437 VTELPKSFSHFITNVCAIIGGVFTVAGILDSIFHNTLRLVKKVELGKN 484
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 24/213 (11%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P GCR EG + KVPGN +S S + +M+H+I
Sbjct: 94 GRHEVGHIENSMKVPLNNGHGCRFEGEFSINKVPGNFHVSTHSA--TAQPQSPDMTHIIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
L+FG KL + VQ LGG+ DRL + +H ++ L+IV T E
Sbjct: 152 KLAFGAKLQ---VQHVQGAFNALGGA-DRLQSNALASH---------DYILKIVPTVYEE 198
Query: 136 I--TRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
+ +R+S ++++ + EY A+S + IPA F ++LSP+ V TE + F FIT
Sbjct: 199 LGGKQRFSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRRPFYRFITT 255
Query: 194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
+CAIIGG FTVAGI+D+ + KK++IGK
Sbjct: 256 ICAIIGGTFTVAGIIDSCIFTASEAWKKIQIGK 288
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 24/213 (11%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P GCR EG + KVPGN +S S +M+HVI
Sbjct: 94 GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQ--PQNPDMTHVIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT---- 133
LSFG L + ++ LGG+ DRL +H ++ L+IV T
Sbjct: 152 KLSFGDTLQ---VQNIHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198
Query: 134 EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
+ +RYS ++++ + EY A+S + IPA F ++LSP+ V TE + FIT
Sbjct: 199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255
Query: 194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
+CAIIGG FTVAGILD+ + KK+++GK
Sbjct: 256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P GCR EG + KVPGN +S S +M+H I
Sbjct: 94 GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQ--PQNPDMTHTIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT---- 133
LSFG L + +V LGG+ DRL +H ++ L+IV T
Sbjct: 152 KLSFGDTLQ---VQNVHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198
Query: 134 EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
+ +RYS ++++ + EY A+S + IPA F ++LSP+ V TE + FIT
Sbjct: 199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255
Query: 194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
+CAIIGG FTVAGILD+ + KK+++GK
Sbjct: 256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 112/214 (52%), Gaps = 26/214 (12%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P A GCR EG + KVPGN +S S + +M H+I
Sbjct: 94 GRHEVGHIDNSMKIPINNAYGCRFEGLFSINKVPGNFHVSTHSAIAQ--PANPDMRHIIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
LSFG L + ++ LGG+ D+L ++ +H ++ L+IV T E
Sbjct: 152 KLSFGNTLQ---VDNIHGAFNALGGA-DKLASKALESH---------DYVLKIVPTVYED 198
Query: 136 IT--RRYSREHSLLEE-YEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFIT 192
+ +++S ++++ + Y +H+ V +PA F ++LSP+ V TE + FIT
Sbjct: 199 LNGKQQFSYQYTVANKAYVAYSHTGRV----VPAIWFRYDLSPITVKYTERRQPMYRFIT 254
Query: 193 NVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
VCAIIGG FTVAGILD+ + KK+++GK
Sbjct: 255 TVCAIIGGTFTVAGILDSFIFTASEAWKKIQLGK 288
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 35/212 (16%)
Query: 30 KRPAPKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHL 79
K K GC++ G++ V KV GN + +S H SF +NM+H I HL
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHL 250
Query: 80 SFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRR 139
SFGR D L+ L GS + + +++ +++++IV T + +
Sbjct: 251 SFGR--------DYPGLVNPLDGS----------SVAAMQSSMMFQYFVKIVPTVYV--K 290
Query: 140 YSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVVITEDPKSFSHFITNVC 195
E ++ T H + + +P +ELSPM V +TE +SF+HF+T VC
Sbjct: 291 VDGEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVC 350
Query: 196 AIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
AIIGGVFTVAG++D++++ + R + KK+E+GK
Sbjct: 351 AIIGGVFTVAGLIDSLVYYSTRAIQKKIELGK 382
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 21 KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
K T E KR K GC++ G++ V KV GN + +S H
Sbjct: 174 KTPDTIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKV--MSDVQRLIPYLGGSHDRLNGRSFINHREVGAN 121
SF +NM+H I HLSFG+ V + D P A+
Sbjct: 234 SFGLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQ--------------------AS 273
Query: 122 VTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQ 177
+ +++++IV T I + E ++ T H + + +P +ELSPM
Sbjct: 274 MMYQYFVKIVPT--IYVKGDGEVVKTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMM 331
Query: 178 VVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
V TE +SF+HF+T VCAIIGGVFTVAG++D++++++ R + KK+E+GK
Sbjct: 332 VKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAIQKKIELGK 381
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 40/217 (18%)
Query: 30 KRPAPKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----------SFDTSEMNMSH 74
K K GC++ G++ V KV GN + +S H SF +NM+H
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSFGLDNINMTH 250
Query: 75 VISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTE 134
I HLSFG+ G + L+G S + + +++ +++++IV T
Sbjct: 251 EIKHLSFGKDYP---------------GLVNPLDGTSIVAMQ---SSMMFQYFVKIVPTV 292
Query: 135 VITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVVITEDPKSFSHF 190
+ + E ++ T H + + +P +ELSPM V TE +SF+HF
Sbjct: 293 YV--KVDGEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHF 350
Query: 191 ITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
+T VCAIIGGVFTVAG++D++++ + R + KK+E+GK
Sbjct: 351 LTGVCAIIGGVFTVAGLIDSLIYYSTRAIQKKIELGK 387
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 42/228 (18%)
Query: 21 KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
K+ T E +R K GC++ G++ V KV GN + +S H
Sbjct: 173 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 232
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
SF +NM+H I HLSFG P + +N N A++
Sbjct: 233 SFGLDNINMTHYIQHLSFGEDY-PGI-----------------VNPLDHTNVTAPQASMM 274
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVV 179
++++++V T + + E ++ T H + + +P +ELSPM V
Sbjct: 275 FQYFVKVVPT--VYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 332
Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
+TE +SF+HF+T VCAIIGG+FTVAG++D++++++ R + KK+++GK
Sbjct: 333 LTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 380
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 42/228 (18%)
Query: 21 KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
K+ T E +R K GC++ G++ V KV GN + +S H
Sbjct: 174 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
SF +NM+H I HLSFG P + +N N A++
Sbjct: 234 SFGLDNINMTHYIQHLSFGEDY-PGI-----------------VNPLDHTNVTAPQASMM 275
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVV 179
++++++V T + + E ++ T H + + +P +ELSPM V
Sbjct: 276 FQYFVKVVPT--VYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 333
Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
+TE +SF+HF+T VCAIIGG+FTVAG++D++++++ R + KK+++GK
Sbjct: 334 LTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 42/228 (18%)
Query: 21 KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
K+ T E +R K GC++ G++ V KV GN + +S H
Sbjct: 174 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
SF +NM+H I HLSFG P + +N N A++
Sbjct: 234 SFGLDNINMTHYIQHLSFGEDY-PGI-----------------VNPLDHTNVTAPQASMM 275
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVV 179
++++++V T + + E ++ T H + + +P +ELSPM V
Sbjct: 276 FQYFVKVVPT--VYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 333
Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
+TE +SF+HF+T VCAIIGG+FTVAG++D++++++ R + KK+++GK
Sbjct: 334 LTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 35 KAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHLSFGRK 84
K GC++ G++ V KV GN + +S H SF +NM+H I HLSFG
Sbjct: 195 KNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGED 254
Query: 85 LSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREH 144
P + +N N A++ ++++++V T + + E
Sbjct: 255 Y-PGI-----------------VNPLDHTNVTAPQASMMFQYFVKVVPT--VYMKVDGEV 294
Query: 145 SLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGG 200
++ T H + + +P +ELSPM V +TE +SF+HF+T VCAIIGG
Sbjct: 295 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGG 354
Query: 201 VFTVAGILDAILHNTMR-LMKKVEIGK 226
+FTVAG++D++++++ R + KK+++GK
Sbjct: 355 MFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 42/228 (18%)
Query: 21 KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
K+ T E +R K GC++ G++ V KV GN + +S H
Sbjct: 174 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
SF +NM+H I HLSFG P + +N N A++
Sbjct: 234 SFGLDNINMTHYIRHLSFGEDY-PGI-----------------VNPLDHTNVTAPQASMM 275
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVV 179
++++++V T + + E ++ T H + + +P +ELSPM V
Sbjct: 276 FQYFVKVVPT--VYMKVDGEVLRTNQFSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVK 333
Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
+TE +SF+HF+T VCAIIGG+FTVAG++D++++++ R + KK+++GK
Sbjct: 334 LTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 40/209 (19%)
Query: 38 GCRIEGYVRVKKVPGNLIISARSGAHS----------FDTSEMNMSHVISHLSFGRKLSP 87
GC++ G++ V KV GN + F N+SH I+ LSFG P
Sbjct: 197 GCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGSFNVSHTINRLSFGNDF-P 255
Query: 88 KV---MSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EVIT--RRY 140
+ + DV + VG + ++++++V T E + R
Sbjct: 256 GIKNPLDDVTKT-------------------EMVGVGM-FQYFVKVVPTIYEGLNGNRIA 295
Query: 141 SREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGG 200
+ ++S+ E Y A S +P F ++LSP+ + ++E KSF+ F+TNVCAIIGG
Sbjct: 296 TNQYSVTEHYRLLAKKGEEPS-GLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGG 354
Query: 201 VFTVAGILDA-ILHNTMRLMKKVEIGKNF 228
VFTV GI D+ I ++T L KK+++GK F
Sbjct: 355 VFTVFGIFDSFIYYSTKNLQKKIDLGKTF 383
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 38 GCRIEGYVRVKKVPGNLIISA-------RSGAHS---FDTSEMNMSHVISHLSFGRKLSP 87
CRI G++ V KV GN I+ R AH + N SH I HLSFG
Sbjct: 169 ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSYNFSHRIDHLSFGE---- 224
Query: 88 KVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLL 147
L+P G + L+G I V N ++++ +V T++ T + S +
Sbjct: 225 --------LVP---GIINPLDGTEKI---AVDHNQMFQYFITVVPTKLHTYKISADTHQF 270
Query: 148 EEYE------YTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGV 201
E + A S V I++ ++LS + V +TE+ F F +C IIGG+
Sbjct: 271 SVTERERIINHAAGSHGVSGIFMK-----YDLSSLMVTVTEEHMPFWQFFVRLCGIIGGI 325
Query: 202 FTVAGILDAI 211
F+ G+L I
Sbjct: 326 FSTTGMLHGI 335
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 41/201 (20%)
Query: 27 ENVKRPAPKAGGCRIEGYVRVKKVPGNLIISA-------RSGAHS---FDTSEMNMSHVI 76
E+ +P A CRI G++ V KV GN I+ R AH + N SH I
Sbjct: 160 EDDSSQSPDA--CRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESYNFSHRI 217
Query: 77 SHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVI 136
HLSFG +L P ++ + L+G I + N ++++ +V T++
Sbjct: 218 DHLSFG-ELVPAII--------------NPLDGTEKI---AIDHNQMFQYFITVVPTKLH 259
Query: 137 TRRYSREHSLLEEYE------YTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHF 190
T + S + E + A S V I++ ++LS + V +TE+ F F
Sbjct: 260 TYKISADTHQFSVTERERIINHAAGSHGVSGIFMK-----YDLSSLMVTVTEEHMPFWQF 314
Query: 191 ITNVCAIIGGVFTVAGILDAI 211
+C I+GG+F+ G+L I
Sbjct: 315 FVRLCGIVGGIFSTTGMLHGI 335
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 41/201 (20%)
Query: 27 ENVKRPAPKAGGCRIEGYVRVKKVPGNLIISA-------RSGAHS---FDTSEMNMSHVI 76
E+ +P A CRI G++ V KV GN I+ R AH + N SH I
Sbjct: 160 EDDSSQSPNA--CRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESYNFSHRI 217
Query: 77 SHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVI 136
HLSFG +L P ++ + L+G I + N ++++ +V T++
Sbjct: 218 DHLSFG-ELVPAII--------------NPLDGTEKI---AIDHNQMFQYFITVVPTKLH 259
Query: 137 TRRYSREHSLLEEYE------YTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHF 190
T + S + E + A S V I++ ++LS + V +TE+ F F
Sbjct: 260 TYKISADTHQFSVTERERIINHAAGSHGVSGIFMK-----YDLSSLMVTVTEEHMPFWQF 314
Query: 191 ITNVCAIIGGVFTVAGILDAI 211
+C I+GG+F+ G+L I
Sbjct: 315 FVRLCGIVGGIFSTTGMLHGI 335
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 48/226 (21%)
Query: 10 LEESHKLALDGKHKTTAENVKRPAPK--------AGGCRIEGYVRVKKVPGNLIISA--- 58
L+E H L D K+T ++ P CRI G++ V KV GN I+
Sbjct: 134 LQEEHSLQ-DVIFKSTFKSASTALPPREDDSSQPPDACRIHGHLYVNKVAGNFHITVGKA 192
Query: 59 ----RSGAHS---FDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRS 111
R AH + N SH I HLSFG L+P G + L+G
Sbjct: 193 IPHPRGHAHLAALVNHDSYNFSHRIDHLSFGE------------LVP---GIINPLDGTE 237
Query: 112 FINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYE------YTAHSSLVQSIYIP 165
I + N ++++ +V T++ T + S + E + A S V I++
Sbjct: 238 KI---ALDHNQMFQYFITVVPTKLHTYKISADTHQFSVTERERVINHAAGSHGVSGIFMK 294
Query: 166 AAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAI 211
++LS + V +TE+ F F +C I+GG+F+ G+L I
Sbjct: 295 -----YDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGMLHGI 335
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 41/212 (19%)
Query: 38 GCRIEGYVRVKKVPGNLIIS-----ARSGAHSFDTS------EMNMSHVISHLSFGRKLS 86
GCRI+G ++ ++ GNL + + H DTS +N +H+I+HLSFG+ +
Sbjct: 205 GCRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTSLYDKTSNLNFNHIINHLSFGKPIQ 264
Query: 87 --PKVMSDVQRLIPYLGG---SHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYS 141
K++ + +R GG + L+GR R T H V TR
Sbjct: 265 SHSKLLGNDKR----HGGAVVATSPLDGRQVFPDRN-----THFHQFSYFAKIVPTRYEY 315
Query: 142 REHSLLEEYEYTA--HS-------------SLVQSIYIPAAKFHFELSPMQVVITED-PK 185
++ ++E +++A HS +L IP FE+SP++V+ E +
Sbjct: 316 LDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGMFVFFEMSPLKVINKEQHGQ 375
Query: 186 SFSHFITNVCAIIGGVFTVAGILDAILHNTMR 217
++S FI N IGGV V ++D + + R
Sbjct: 376 TWSGFILNCITSIGGVLAVGTVMDKLFYKAQR 407
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 43/195 (22%)
Query: 32 PAPKAGGCRIEGYVRVKKVPGNLIISA-------RSGAH-----SFDTSEMNMSHVISHL 79
P CRI G++ V KV GN I+ R AH S +T N SH I HL
Sbjct: 162 PNQPLNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVSHET--YNFSHRIDHL 219
Query: 80 SFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRR 139
SFG + IP G + L+G ++ N ++++ IV T++ T +
Sbjct: 220 SFGEE------------IP---GILNPLDGTEKVS---ADHNQMFQYFITIVPTKLQTYK 261
Query: 140 -YSREHSL-LEEYE----YTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
Y+ H + E E + A S V I++ +++S + V +TE F F+
Sbjct: 262 VYADTHQYSVTERERVINHAAGSHGVSGIFM-----KYDISSLMVKVTEQHMPFWQFLVR 316
Query: 194 VCAIIGGVFTVAGIL 208
+C IIGG+F+ G+L
Sbjct: 317 LCGIIGGIFSTTGML 331
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 43/232 (18%)
Query: 18 LDGKHKTTAENVKR--PAPKAGGCRIEGYVRVKKVPGNLII----SARSG-AHSFDTSEM 70
+D + EN K A K GC + G + V ++ GN I S ++G H DT +
Sbjct: 174 VDAFKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDY 233
Query: 71 -------NMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
+MSH I HLSFG P + + V P L G+ +++ A+
Sbjct: 234 INELDLHDMSHSIHHLSFG----PPLDASVHYSNP-LDGTVKKVST----------ADYR 278
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY-------------IPAAKFH 170
E++++ V + + S +Y T H ++ IP F
Sbjct: 279 YEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQ 338
Query: 171 FELSPMQVVITE-DPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKK 221
F++SPM+V+ + +F F++NV A++GG T+A +D + +L K
Sbjct: 339 FDISPMRVIERQVRGNTFGGFLSNVLALLGGCVTLASFVDRGYYEVQKLKKN 390
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 34/217 (15%)
Query: 8 IPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS----GAH 63
IP E KL + N K P+ GC + G + V +V G L I+A+S +
Sbjct: 132 IPAEFREKLDTRSFFDESDPN-KAHLPEFNGCHVFGSIPVNRVSGELQITAKSLGYVASR 190
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
E+ +HVI+ SFG PY+ D N F N E T
Sbjct: 191 KAPLEELKFNHVINEFSFG------------DFYPYIDNPLD--NTAQF-NQDE--PLTT 233
Query: 124 IEHYLQIVKT-------EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPM 176
+Y +V T EV T +YS + +Y Y + +P F + P+
Sbjct: 234 YVYYTSVVPTLFKKLGAEVDTNQYS-----VNDYRYLYKDVAAKGDKMPGIFFKYNFEPL 288
Query: 177 QVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILH 213
+V+++ SF F+ + AI + A + +L
Sbjct: 289 SIVVSDVRLSFIQFLVRLVAICSFLVYCASWIFTLLD 325
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 34 PKAG-GCRIEGYVRVKKVPGNLIISARS---GAHSFDTSEMNMSHVISHLSFGRKLSPKV 89
P +G CRI G + V +V G L I+A G + +N +H I LSFG
Sbjct: 146 PGSGTACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPFHSLNFTHYIEELSFGEYYPA-- 203
Query: 90 MSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEE 149
L+ L G + N F ++YL ++ T + S E + +
Sbjct: 204 ------LVNALDGHYGHANDHPF----------AFQYYLSVLPTSYKSSFRSFETN---Q 244
Query: 150 YEYTAHSSLVQSIY--IPAAKF-HFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAG 206
Y T +S + Q + +P F ++L P+ V + + + + + + AI GG+ TVA
Sbjct: 245 YSLTENSVVRQLGFGSLPPGIFIDYDLEPLAVRVVDKHPNVASTLLRILAISGGLITVAS 304
Query: 207 ILDAI 211
++ +
Sbjct: 305 WIERV 309
>sp|Q2PDF6|RTPR_EUGGR Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase
OS=Euglena gracilis GN=rnr PE=1 SV=1
Length = 729
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 106 RLNGR-SFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYI 164
R+NG+ + + R +G N +E L+ ++ + + +H LE+++ T +S+L+ + +
Sbjct: 409 RMNGKPDYRDQRVLGGNPCLEQSLESMELCCLVETFPDKHETLEDFKRTLYSALLYAKTV 468
Query: 165 PAAKFHFELS 174
H+ S
Sbjct: 469 TLLPLHWRES 478
>sp|O33774|HIS6_SULSO Imidazole glycerol phosphate synthase subunit HisF OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=hisF PE=3 SV=1
Length = 251
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 40/84 (47%)
Query: 13 SHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNM 72
+ K++++ +++ VK+ A + G + + VKKV GN I+ +SG ++ +
Sbjct: 97 ADKVSINTAAVESSQIVKKSAEEFGSQAVVVAIDVKKVSGNWIVFTKSGTYNTRLDAIKW 156
Query: 73 SHVISHLSFGRKLSPKVMSDVQRL 96
+ + L G L + D RL
Sbjct: 157 AKKVEELGAGEILLTSIDRDGTRL 180
>sp|Q566N0|ENPP4_DANRE Ectonucleotide pyrophosphatase/phosphodiesterase family member 4
OS=Danio rerio GN=enpp4 PE=2 SV=1
Length = 459
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 96 LIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAH 155
L+ + G D LN SF N + ++ + H L V T T+ + +SL+ +H
Sbjct: 36 LVSFDGFRADYLNKYSFPNLEKFFSDGVLVHELTNVFT---TKTFPNHYSLVTGLYAESH 92
Query: 156 SSLVQSIYIPAAKFHFEL 173
L +Y P AK HF +
Sbjct: 93 GMLASIMYDPVAKKHFSI 110
>sp|Q02256|PVH1_YEAST Tyrosine-protein phosphatase YVH1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YVH1 PE=1 SV=1
Length = 364
Score = 31.2 bits (69), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Query: 99 YLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVI 136
YLGG R I+HR +GA I H L ++K +VI
Sbjct: 20 YLGGI------RPIIDHRPLGAEFNITHILSVIKFQVI 51
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,064,326
Number of Sequences: 539616
Number of extensions: 3274422
Number of successful extensions: 7415
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7344
Number of HSP's gapped (non-prelim): 30
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)