Query 027071
Match_columns 228
No_of_seqs 103 out of 522
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 04:33:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027071.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027071hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2667 COPII vesicle protein 100.0 4.5E-56 9.7E-61 406.5 19.1 178 29-228 187-379 (379)
2 PF07970 COPIIcoated_ERV: Endo 100.0 1.3E-52 2.9E-57 362.8 14.9 161 29-209 46-222 (222)
3 PF10399 UCR_Fe-S_N: Ubiquitin 51.2 5.1 0.00011 25.8 0.0 31 181-211 8-38 (41)
4 COG3765 WzzB Chain length dete 49.2 13 0.00027 34.7 2.3 48 167-219 297-344 (347)
5 PF12421 DUF3672: Fibronectin 43.5 18 0.00039 29.1 2.1 26 33-58 28-53 (136)
6 PF05365 UCR_UQCRX_QCR9: Ubiqu 42.8 29 0.00063 23.7 2.7 30 192-221 14-43 (55)
7 PF10661 EssA: WXG100 protein 37.0 16 0.00035 29.8 0.9 14 193-206 128-141 (145)
8 KOG4085 Uncharacterized conser 29.5 35 0.00075 28.2 1.7 25 186-210 26-50 (175)
9 PF11118 DUF2627: Protein of u 26.0 36 0.00077 25.0 1.0 22 187-208 40-61 (77)
10 PF07413 Herpes_UL37_2: Betahe 23.8 83 0.0018 28.5 3.2 42 178-219 228-272 (276)
11 PF11888 DUF3408: Protein of u 22.5 97 0.0021 24.6 3.1 33 184-216 86-119 (136)
12 PF04971 Lysis_S: Lysis protei 21.9 65 0.0014 23.1 1.7 25 195-219 36-61 (68)
13 KOG2014 SMT3/SUMO-activating c 21.4 29 0.00063 32.0 -0.2 11 193-203 286-296 (331)
14 PF13496 DUF4120: Domain of un 20.4 62 0.0013 24.3 1.4 32 166-203 42-73 (95)
No 1
>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-56 Score=406.50 Aligned_cols=178 Identities=42% Similarity=0.662 Sum_probs=155.4
Q ss_pred ccCCCCCCCCceEEEEEEEeeeceEEEEEeC-----CCCCCCCCC---CCcccEEEeEeeecCCCCccchhhhhhcccCC
Q 027071 29 VKRPAPKAGGCRIEGYVRVKKVPGNLIISAR-----SGAHSFDTS---EMNMSHVISHLSFGRKLSPKVMSDVQRLIPYL 100 (228)
Q Consensus 29 ~~~~~~~~eGCrI~G~~~VnkV~GnfhIs~~-----~~~h~~~~~---~~N~SH~I~~LsFG~~~~~~~~~~~~~~~~~~ 100 (228)
.+.+.+.+|||||+|++.||||||||||+|+ +..|.++.. .+||||+|||||||+.+|
T Consensus 187 ~~~~~~~geGCRi~G~l~VNKVaGnfHia~g~~~~~~~~h~hd~~~~~~~n~SH~InhLSFG~~~p-------------- 252 (379)
T KOG2667|consen 187 NKAAEQKGEGCRIYGQLEVNKVAGNFHIAPGKSSQHSNAHVHDLSLLDNLNFSHRINHLSFGEYIP-------------- 252 (379)
T ss_pred cccCCCCCCceEEEEEEEEeeecceEEEccCCCccccccccchhhhcccCCceEEEeeeccCCCCc--------------
Confidence 3456788999999999999999999999985 234666653 799999999999999875
Q ss_pred CCCcCCCCCceeeeecccCCceeeeEEEEEEEEEEEecccccccceeeeeEE--Eeeeecc----cCCCCCeEEEEEecc
Q 027071 101 GGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEY--TAHSSLV----QSIYIPAAKFHFELS 174 (228)
Q Consensus 101 ~~~~~PLdg~~~~~~~~~~~~~~~~YylkvVPT~y~~~~~~~~~~~~~tyQY--T~~~~~~----~~~~~PgIfF~Yd~S 174 (228)
+..|||||+.+ ...++..+|+||+|||||.|.+..+.. +.|||| |+++... ...++|||||.||+|
T Consensus 253 -~~~nPLdG~~~---~~~~~~~~~~Yf~KvVPT~y~~~~~~~----~~T~QysVt~~~~~~~~~~~~~~~PGifF~YelS 324 (379)
T KOG2667|consen 253 -GIVNPLDGTNF---IANEHLTTFQYFLKVVPTVYKYKSGRV----IDTNQYSVTEYEYVLHSHRAKSGIPGIFFKYELS 324 (379)
T ss_pred -ccccCCCCccc---cccCCccceeeEEEEcceEEEeecCce----ecceeeeeeeeEEeccccccccCCCeEEEEEecC
Confidence 78899999877 445668999999999999999777654 799999 5555432 234899999999999
Q ss_pred ceEEEEEeecchhHHHHHhHhhhhcceeehhHHHHHHHHHHHHHhh-hhhcCCCC
Q 027071 175 PMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMK-KVEIGKNF 228 (228)
Q Consensus 175 Pi~V~~~e~r~sf~~Flt~lcAIIGGvftv~gliD~~i~~~~~~~k-k~~~gk~~ 228 (228)
||+|+++|+|+||+||||++||||||+||||||||++++++++++| |.++||++
T Consensus 325 Pl~V~v~E~r~sf~~Flt~lCAIiGGvftvagiid~~~~~~~~~i~~k~~~gk~~ 379 (379)
T KOG2667|consen 325 PLMVKVTEERQSFSHFLTRLCAIIGGVFTVAGILDSLLYHILELIKGKIALGKYT 379 (379)
T ss_pred ceEEEEEeccccHHHHHHHHHHHhcceeehHHHHHHHHHHHHHHHhcchhhhccC
Confidence 9999999999999999999999999999999999999999999997 89999974
No 2
>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins. One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].
Probab=100.00 E-value=1.3e-52 Score=362.78 Aligned_cols=161 Identities=42% Similarity=0.713 Sum_probs=135.7
Q ss_pred ccCCCCCCCCceEEEEEEEeeeceEEEEEeCC-----CCCCCC-----CC-CCcccEEEeEeeecCCCCccchhhhhhcc
Q 027071 29 VKRPAPKAGGCRIEGYVRVKKVPGNLIISARS-----GAHSFD-----TS-EMNMSHVISHLSFGRKLSPKVMSDVQRLI 97 (228)
Q Consensus 29 ~~~~~~~~eGCrI~G~~~VnkV~GnfhIs~~~-----~~h~~~-----~~-~~N~SH~I~~LsFG~~~~~~~~~~~~~~~ 97 (228)
++.....+|||||+|++.||||+|||||+++. ..|.++ .. .+||||+|||||||++++
T Consensus 46 ~~~~~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~~~~~~~~~N~SH~I~~lsFG~~~~----------- 114 (222)
T PF07970_consen 46 IKEQVNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLSPFDDEPKFNFSHTINHLSFGEEIP----------- 114 (222)
T ss_pred hhhhccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceeehhhhccccCCCCCeEEEEEEeccccc-----------
Confidence 34456678999999999999999999999975 234322 22 799999999999999876
Q ss_pred cCCCCCcCCCCCceeeeecccCCceeeeEEEEEEEEEEEecccccccceeeeeEEE--eeeeccc---CCCCCeEEEEEe
Q 027071 98 PYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYT--AHSSLVQ---SIYIPAAKFHFE 172 (228)
Q Consensus 98 ~~~~~~~~PLdg~~~~~~~~~~~~~~~~YylkvVPT~y~~~~~~~~~~~~~tyQYT--~~~~~~~---~~~~PgIfF~Yd 172 (228)
+..|||||+.++. ..+....+|+||||||||+|.+.++.. ++||||+ ++.+... ..++|||||+||
T Consensus 115 ----~~~~PLdg~~~~~-~~~~~~~~~~YflkvVPT~y~~~~~~~----~~t~qYsvt~~~~~~~~~~~~~~PGI~F~Yd 185 (222)
T PF07970_consen 115 ----GIVNPLDGTQKIV-QTDNGNYMYQYFLKVVPTTYEDLDGFS----IETYQYSVTEHSRPLNGGSSGGLPGIFFKYD 185 (222)
T ss_pred ----cccccccCccccc-cCCCCceeEEEEEEEeeeeeEeccccc----cccccccceeeeeeccCCCCCCCceEEEEEe
Confidence 4568999998842 234568999999999999999987653 5899995 4444432 268999999999
Q ss_pred ccceEEEEEeecchhHHHHHhHhhhhcceeehhHHHH
Q 027071 173 LSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILD 209 (228)
Q Consensus 173 ~SPi~V~~~e~r~sf~~Flt~lcAIIGGvftv~gliD 209 (228)
||||+|+++++|+||+||||+|||||||||||+||||
T Consensus 186 ~SPi~v~~~~~r~s~~~flt~lcaIiGGvftv~gliD 222 (222)
T PF07970_consen 186 FSPIMVVITEDRKSFLHFLTRLCAIIGGVFTVAGLID 222 (222)
T ss_pred ceeEEEEEEEecCCHHHHHHHHHHHhchHheEEEecC
Confidence 9999999999999999999999999999999999998
No 3
>PF10399 UCR_Fe-S_N: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; InterPro: IPR019470 This entry represents the TAT-signal region found in the iron-sulphur subunit of Ubiquinol-cytochrome C reductase (also known as the cytochrome bc1 complex). This enzymex is an oligomeric membrane protein complex that is a component of respiratory and photosynthetic electron transfer chains. It couples the transfer of electrons from ubiquinol to cytochrome c with the generation of a protein gradient across the membrane []. This entry is associated with IPR017941 from INTERPRO, IPR004192 from INTERPRO and IPR015248 from INTERPRO. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0055114 oxidation-reduction process; PDB: 1ZRT_R 2QJY_R 2FYN_L 2QJK_O 2QJP_I 2YIU_F.
Probab=51.15 E-value=5.1 Score=25.79 Aligned_cols=31 Identities=10% Similarity=0.219 Sum_probs=25.1
Q ss_pred EeecchhHHHHHhHhhhhcceeehhHHHHHH
Q 027071 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAI 211 (228)
Q Consensus 181 ~e~r~sf~~Flt~lcAIIGGvftv~gliD~~ 211 (228)
..+|+.|+...+...|.+|++.++.-+|+++
T Consensus 8 ~~~RRdFL~~at~~~gavG~~~~a~Pfv~s~ 38 (41)
T PF10399_consen 8 DPTRRDFLTIATSAVGAVGAAAAAWPFVSSM 38 (41)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4568889999999999999999888888764
No 4
>COG3765 WzzB Chain length determinant protein [Cell envelope biogenesis, outer membrane]
Probab=49.25 E-value=13 Score=34.70 Aligned_cols=48 Identities=21% Similarity=0.350 Sum_probs=33.9
Q ss_pred EEEEEeccceEEEEEeecchhHHHHHhHhhhhcceeehhHHHHHHHHHHHHHh
Q 027071 167 AKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLM 219 (228)
Q Consensus 167 IfF~Yd~SPi~V~~~e~r~sf~~Flt~lcAIIGGvftv~gliD~~i~~~~~~~ 219 (228)
--|+|+-+|..=+-. ..|=--+++-+.|+|||++.+...+ +.++++..
T Consensus 297 ~~yRYl~~P~~Pvkr--d~PrrA~ilil~~LiGgm~g~g~vL---~R~~lk~~ 344 (347)
T COG3765 297 STYRYLQKPTLPVKR--DSPRRAIILILGALIGGMLGAGVVL---LRNALKKY 344 (347)
T ss_pred eEEEecCCCCCCCcC--CCcchHHHHHHHHHHHHHHHHHHHH---HHHHHHHh
Confidence 457788877654433 2555688999999999999988776 55555444
No 5
>PF12421 DUF3672: Fibronectin type III protein ; InterPro: IPR021034 This entry represents a region of bacterial and viral proteins that are typically between 126 and 146 amino acids in length. The signature is found at the C terminus in association with PF09327 from PFAM and PF00041 from PFAM. There are two completely conserved G residues that may be functionally important. Many of the proteins in this entry are annotated as fibronectin type III however there is little accompanying literature to confirm this. It is also found in Host specificity protein J from Enterobacteria phage lambda (Bacteriophage lambda).
Probab=43.53 E-value=18 Score=29.08 Aligned_cols=26 Identities=23% Similarity=0.462 Sum_probs=22.3
Q ss_pred CCCCCCceEEEEEEEeeeceEEEEEe
Q 027071 33 APKAGGCRIEGYVRVKKVPGNLIISA 58 (228)
Q Consensus 33 ~~~~eGCrI~G~~~VnkV~GnfhIs~ 58 (228)
....|-|.|.|++..+++-|++--+.
T Consensus 28 ~~~~~~~~~~Gtv~A~~i~GDiv~~~ 53 (136)
T PF12421_consen 28 VTIAESCTFKGTVYANKIIGDIVKAY 53 (136)
T ss_pred eEEcccceEEeEEEehhEecceeEEE
Confidence 34589999999999999999987753
No 6
>PF05365 UCR_UQCRX_QCR9: Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; InterPro: IPR008027 The UQCRX/QCR9 protein is the 9/10 subunit of complex III, and is a protein of about 7 kDa. Deletion of QCR9 results in the inability of Saccharomyces cerevisiae to grow on a fermentable carbon source []. The protein is part of the mitchondrial respiratory chain. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0006122 mitochondrial electron transport, ubiquinol to cytochrome c, 0005740 mitochondrial envelope; PDB: 3CX5_T 2IBZ_I 1KYO_I 3CXH_T 1EZV_I 1P84_I 1KB9_I 3H1L_W 3L71_W 3L73_W ....
Probab=42.83 E-value=29 Score=23.73 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=23.2
Q ss_pred HhHhhhhcceeehhHHHHHHHHHHHHHhhh
Q 027071 192 TNVCAIIGGVFTVAGILDAILHNTMRLMKK 221 (228)
Q Consensus 192 t~lcAIIGGvftv~gliD~~i~~~~~~~kk 221 (228)
+=+.+|++|.|+.-..+|......-..++|
T Consensus 14 ~y~~~i~~gaf~fe~~fd~~~d~~w~~~Nk 43 (55)
T PF05365_consen 14 TYVLTIFAGAFFFERAFDSATDKIWDSINK 43 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence 346788999999888888888777666655
No 7
>PF10661 EssA: WXG100 protein secretion system (Wss), protein EssA; InterPro: IPR018920 The Wss (WXG100 protein secretion system) in Staphylococcus aureus seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) []. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus in conjunction with YukC and YukAB. Proteins homologous to EssA, YukC, EsaA and YukD were absent from mycobacteria []. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This highly divergent protein family consists largely of a central region of highly polar low-complexity sequence containing occasional LF motifs in weak repeats about 17 residues in length, flanked by hydrophobic N- and C-terminal regions.
Probab=37.01 E-value=16 Score=29.81 Aligned_cols=14 Identities=36% Similarity=0.605 Sum_probs=7.4
Q ss_pred hHhhhhcceeehhH
Q 027071 193 NVCAIIGGVFTVAG 206 (228)
Q Consensus 193 ~lcAIIGGvftv~g 206 (228)
.||+|+||+|++++
T Consensus 128 ~ll~i~~giy~~~r 141 (145)
T PF10661_consen 128 ILLAICGGIYVVLR 141 (145)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555555544
No 8
>KOG4085 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.55 E-value=35 Score=28.20 Aligned_cols=25 Identities=8% Similarity=0.067 Sum_probs=19.2
Q ss_pred hhHHHHHhHhhhhcceeehhHHHHH
Q 027071 186 SFSHFITNVCAIIGGVFTVAGILDA 210 (228)
Q Consensus 186 sf~~Flt~lcAIIGGvftv~gliD~ 210 (228)
=|+.|+.++.||+|+++.+..-+-.
T Consensus 26 Ww~r~l~rl~gilgaf~~~~fGvf~ 50 (175)
T KOG4085|consen 26 WWYRWLCRLSGILGAFSCAIFGVFN 50 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3589999999999998876544333
No 9
>PF11118 DUF2627: Protein of unknown function (DUF2627); InterPro: IPR020138 This entry represents uncharacterised membrane proteins with no known function.
Probab=26.04 E-value=36 Score=24.97 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=21.0
Q ss_pred hHHHHHhHhhhhcceeehhHHH
Q 027071 187 FSHFITNVCAIIGGVFTVAGIL 208 (228)
Q Consensus 187 f~~Flt~lcAIIGGvftv~gli 208 (228)
|.+|+..+...++|+..++|+|
T Consensus 40 wlqfl~G~~lf~~G~~Fi~GfI 61 (77)
T PF11118_consen 40 WLQFLAGLLLFAIGVGFIAGFI 61 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHhHh
Confidence 8999999999999999999997
No 10
>PF07413 Herpes_UL37_2: Betaherpesvirus immediate-early glycoprotein UL37; InterPro: IPR010880 This family consists of several Betaherpesvirus immediate-early glycoprotein UL37 sequences. The human cytomegalovirus (HCMV) UL37 immediate-early regulatory protein is a type I integral membrane N-glycoprotein which traffics through the ER and the Golgi network [].
Probab=23.83 E-value=83 Score=28.49 Aligned_cols=42 Identities=12% Similarity=0.299 Sum_probs=30.0
Q ss_pred EEEEeecchhHHH---HHhHhhhhcceeehhHHHHHHHHHHHHHh
Q 027071 178 VVITEDPKSFSHF---ITNVCAIIGGVFTVAGILDAILHNTMRLM 219 (228)
Q Consensus 178 V~~~e~r~sf~~F---lt~lcAIIGGvftv~gliD~~i~~~~~~~ 219 (228)
..+..+...+.+. ++++|+++||.|++.+|+=-++-+..+-+
T Consensus 228 ~~~~~~~~~l~~~~~~~~g~~~v~~G~~~lL~LFc~l~~~~Rr~i 272 (276)
T PF07413_consen 228 FILRVDYRALGHWLAALIGMFFVASGAFMLLSLFCCLSIWRRRDI 272 (276)
T ss_pred EEEecCCcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444555666665 88999999999999999866665554433
No 11
>PF11888 DUF3408: Protein of unknown function (DUF3408); InterPro: IPR021823 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length.
Probab=22.51 E-value=97 Score=24.61 Aligned_cols=33 Identities=18% Similarity=0.495 Sum_probs=27.5
Q ss_pred cchhHHHHHhHhhhhc-ceeehhHHHHHHHHHHH
Q 027071 184 PKSFSHFITNVCAIIG-GVFTVAGILDAILHNTM 216 (228)
Q Consensus 184 r~sf~~Flt~lcAIIG-Gvftv~gliD~~i~~~~ 216 (228)
+..+..=|.++..+|| +=++|+|+||.+|.+=+
T Consensus 86 ~~e~h~~l~~Iv~~ig~~~~si~~yidNIL~~Hl 119 (136)
T PF11888_consen 86 SRETHERLSRIVRVIGERKMSISGYIDNILRHHL 119 (136)
T ss_pred CHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHH
Confidence 4667888999999999 66999999999986433
No 12
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=21.91 E-value=65 Score=23.08 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=17.6
Q ss_pred hhhhccee-ehhHHHHHHHHHHHHHh
Q 027071 195 CAIIGGVF-TVAGILDAILHNTMRLM 219 (228)
Q Consensus 195 cAIIGGvf-tv~gliD~~i~~~~~~~ 219 (228)
.+||||++ ++++++-.+.|+..+--
T Consensus 36 IGvi~gi~~~~lt~ltN~YFK~k~dr 61 (68)
T PF04971_consen 36 IGVIGGIFFGLLTYLTNLYFKIKEDR 61 (68)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhhHhh
Confidence 37888776 78888877777665433
No 13
>KOG2014 consensus SMT3/SUMO-activating complex, AOS1/RAD31 component [Posttranslational modification, protein turnover, chaperones]
Probab=21.41 E-value=29 Score=31.98 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=9.1
Q ss_pred hHhhhhcceee
Q 027071 193 NVCAIIGGVFT 203 (228)
Q Consensus 193 ~lcAIIGGvft 203 (228)
=+|||||||.+
T Consensus 286 Pv~AvVGGiva 296 (331)
T KOG2014|consen 286 PVCAVVGGILA 296 (331)
T ss_pred chhhhhhhHhH
Confidence 47999999875
No 14
>PF13496 DUF4120: Domain of unknown function (DUF4120)
Probab=20.42 E-value=62 Score=24.30 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=24.6
Q ss_pred eEEEEEeccceEEEEEeecchhHHHHHhHhhhhcceee
Q 027071 166 AAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFT 203 (228)
Q Consensus 166 gIfF~Yd~SPi~V~~~e~r~sf~~Flt~lcAIIGGvft 203 (228)
-|-..||++|.+.-..|.... .--+|+||++.
T Consensus 42 eIELY~DfApySFgF~e~ypd------G~~givGGlly 73 (95)
T PF13496_consen 42 EIELYYDFAPYSFGFAERYPD------GRRGIVGGLLY 73 (95)
T ss_pred EEEEEeccCccccceeEEccC------CCcceEEeEEe
Confidence 499999999999998886533 22488998764
Done!