BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027073
(228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate
Bound
Length = 462
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 209 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 268
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 269 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 323
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 324 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 378
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 379 VTEDSKFA 386
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
S108a Mutant From P. Aeruginosa
Length = 463
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate
pdb|2H5A|X Chain X, Complex Of The Enzyme PmmPGM WITH XYLOSE 1-Phosphate
Length = 463
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM
Length = 463
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS
AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound
Length = 462
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 209 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 268
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 269 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 323
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 324 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 378
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 379 VTEDSKFA 386
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1P5G|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCJ|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCM|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
Length = 463
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH
ITS SUBSTRATE
pdb|3C04|A Chain A, Structure Of The P368g Mutant Of PmmPGM FROM P. AERUGINOSA
Length = 463
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFGSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
From P.aeruginosa
Length = 463
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLXLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG ++ G+ + K E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVXWKTGHSLIKKK---XKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EXSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|3UW2|A Chain A, X-Ray Crystal Structure Of
PhosphoglucomutasePHOSPHOMANNOMUTASE Family Protein
(Bth_i1489)from Burkholderia Thailandensis
Length = 485
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A + +A++G FD D DR GVV G I D+ + L +
Sbjct: 232 FPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAE 291
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
VL +PG I+ D + + L +++ ++GG +++ G+ V K L E G L
Sbjct: 292 EVLSRNPGAQIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAK---LRETG--APLAG 346
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRM 152
E SGH K+ ++ DDG Y +++ + R+
Sbjct: 347 EMSGHVFFKDRWYGFDDGLYTGARLLEILARV 378
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|C Chain C, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|D Chain D, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
Length = 455
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 2 FPNHIPNPED---KTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIAL 58
FP P P + K M + +A AD GV D D DR+ +D G I GDK AL
Sbjct: 212 FPARNPEPNEENLKEFMEIVKAL----GADFGVAQDGDADRAVFIDENGRFIQGDKTFAL 267
Query: 59 MSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETH 118
++ VLKE G +VT TS L G +VG ++ + ++ N I
Sbjct: 268 VADAVLKEKGGGLLVTTVATSNLLDDIAKKHGAKVMRTKVG-DLIVARALYENNGTIGG- 325
Query: 119 LMMETSGHGALKENYFLDDGAYMVVKII 146
E +G E+ DGA V K++
Sbjct: 326 ---EENGGVIFPEHVLGRDGAMTVAKVV 350
>pdb|3PDK|A Chain A, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
pdb|3PDK|B Chain B, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
Length = 469
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 22 VLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH---PGTTIVTDART 78
V E AD+G+ FD D DR VD KGN ++GD+ I + A +KE T+V+ +
Sbjct: 249 VKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQ-IMFICAKYMKETGQLKHNTVVSTVMS 307
Query: 79 SMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDG 138
++ K + G VG R V+++ + G +L E SGH L + DG
Sbjct: 308 NLGFYKALEANGITSDKTAVGDRYVMEE---MKRGGY--NLGGEQSGHIILLDYITTGDG 362
Query: 139 AYMVVKI--IIQMVRMKL 154
+++ I++M + L
Sbjct: 363 MLSALQLVNIMKMTKKPL 380
>pdb|3I3W|A Chain A, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
pdb|3I3W|B Chain B, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
Length = 443
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 13 TAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
T ++ + AV E ADLG+ D D DR +VD G I+GD ++ +++
Sbjct: 218 TCVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILA 265
>pdb|2F7L|A Chain A, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
pdb|2F7L|B Chain B, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
Length = 455
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
+F P P + + T V DLGV D D DR+ +D++G GD+ L+S
Sbjct: 209 LFSARQPEPTFDS-LKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLS 267
Query: 61 AIVLKEHPGT--TIVTDARTSMALTKFIT 87
++P IVT +S + ++++
Sbjct: 268 YWASVKNPKAIKKIVTAVSSSSLVEEYLS 296
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|B Chain B, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|C Chain C, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|D Chain D, Catalase A From Saccharomyces Cerevisiae
Length = 488
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 72 IVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKE 131
+VT++ + F+T R G H + N+ID H N + I HG+
Sbjct: 7 VVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIP---QRNPHAHGSGAF 63
Query: 132 NYF--LDD-----GAYMVVKIIIQ---MVRMKLEGSDEGIGSLIKD 167
YF DD G+ M KI + + R G D+G ++D
Sbjct: 64 GYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRD 109
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
pdb|2Z0F|B Chain B, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
Length = 524
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 22 VLENNADLGVVFDTDVDRSGVVDNKG--NPINGDKLIALMSAIVLKEHPGTTIVTDARTS 79
L++ DL + D D DR G+V +G NP N AL + PG + A TS
Sbjct: 274 ALKDRFDLAIGNDPDADRHGIVTPRGLMNP-NHYLAAALHHLYTTRSWPGAKVGKTAVTS 332
Query: 80 MALTKFITDRGGNHCLYRVGYRNVI 104
L + G VG+++ +
Sbjct: 333 ALLDRVAQALGREVYETPVGFKHFV 357
>pdb|2LPN|A Chain A, Solution Structure Of N-terminal Domain Of Human Conserved
Dopamine Neurotrophic Factor (cdnf)
Length = 105
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 100 YRNVIDKGVHLNEDGIETHLM---METSGHGALKEN---YFLDDGAYMVVKIIIQMVR 151
Y+++ID+GV+ + D IE L+ ++T G KEN Y+L KI+ ++ R
Sbjct: 22 YKSLIDRGVNFSLDTIEKELISFCLDTKG----KENRLCYYLGATKDAATKILSEVTR 75
>pdb|2W50|A Chain A, N-Terminal Domain Of Human Conserved Dopamine Neurotrophic
Factor (Cdnf)
pdb|2W50|B Chain B, N-Terminal Domain Of Human Conserved Dopamine Neurotrophic
Factor (Cdnf)
Length = 102
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 100 YRNVIDKGVHLNEDGIETHLM---METSGHGALKEN---YFLDDGAYMVVKIIIQMVR 151
Y+++ID+GV+ + D IE L+ ++T G KEN Y+L KI+ ++ R
Sbjct: 17 YKSLIDRGVNFSLDTIEKELISFCLDTKG----KENRLCYYLGATKDAATKILSEVTR 70
>pdb|1JDY|A Chain A, Rabbit Muscle Phosphoglucomutase
pdb|1JDY|B Chain B, Rabbit Muscle Phosphoglucomutase
pdb|1VKL|A Chain A, Rabbit Muscle Phosphoglucomutase
pdb|1VKL|B Chain B, Rabbit Muscle Phosphoglucomutase
pdb|3PMG|A Chain A, Structure Of Rabbit Muscle Phosphoglucomutase At 2.4
Angstroms Resolution. Use Of Freezing Point Depressant
And Reduced Temperature To Enhance Diffractivity
pdb|3PMG|B Chain B, Structure Of Rabbit Muscle Phosphoglucomutase At 2.4
Angstroms Resolution. Use Of Freezing Point Depressant
And Reduced Temperature To Enhance Diffractivity
Length = 561
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
F H P+P A L + D G FD D DR+ ++ G +N +A+++A
Sbjct: 256 FGGHHPDPNLTYAADLVET-MKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAA 314
Query: 62 IVL 64
+
Sbjct: 315 NIF 317
>pdb|1LXT|A Chain A, Structure Of Phosphotransferase Phosphoglucomutase From
Rabbit
pdb|1LXT|B Chain B, Structure Of Phosphotransferase Phosphoglucomutase From
Rabbit
pdb|1C47|A Chain A, Binding Driven Structural Changes In Crystaline
Phosphoglucomutase Associated With Chemical Reaction
pdb|1C47|B Chain B, Binding Driven Structural Changes In Crystaline
Phosphoglucomutase Associated With Chemical Reaction
pdb|1C4G|A Chain A, Phosphoglucomutase Vanadate Based Transition State Analog
Complex
pdb|1C4G|B Chain B, Phosphoglucomutase Vanadate Based Transition State Analog
Complex
Length = 561
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
F H P+P A L + D G FD D DR+ ++ G +N +A+++A
Sbjct: 256 FGGHHPDPNLTYAADLVET-MKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAA 314
Query: 62 IVL 64
+
Sbjct: 315 NIF 317
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,806,435
Number of Sequences: 62578
Number of extensions: 279654
Number of successful extensions: 721
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 708
Number of HSP's gapped (non-prelim): 26
length of query: 228
length of database: 14,973,337
effective HSP length: 95
effective length of query: 133
effective length of database: 9,028,427
effective search space: 1200780791
effective search space used: 1200780791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)