Query 027073
Match_columns 228
No_of_seqs 159 out of 1477
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:03:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027073.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027073hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uw2_A Phosphoglucomutase/phos 100.0 1.4E-49 4.7E-54 367.2 19.6 212 1-226 231-455 (485)
2 2f7l_A 455AA long hypothetical 100.0 5.3E-48 1.8E-52 354.5 22.0 206 1-226 209-433 (455)
3 1p5d_X PMM, phosphomannomutase 100.0 1.4E-47 4.9E-52 352.3 24.0 207 1-226 209-433 (463)
4 1wqa_A Phospho-sugar mutase; a 100.0 2.7E-47 9.1E-52 349.8 20.4 210 1-226 211-431 (455)
5 3pdk_A Phosphoglucosamine muta 100.0 5.2E-46 1.8E-50 342.2 23.0 207 1-226 231-443 (469)
6 1tuo_A Putative phosphomannomu 100.0 2.8E-46 9.6E-51 343.7 17.5 212 1-226 216-443 (464)
7 3i3w_A Phosphoglucosamine muta 100.0 3.5E-46 1.2E-50 341.3 16.7 209 1-226 209-419 (443)
8 3na5_A Phosphoglucomutase; iso 100.0 9.7E-45 3.3E-49 340.5 17.1 208 1-226 289-543 (570)
9 4hjh_A Phosphomannomutase; str 100.0 1.7E-43 5.8E-48 326.6 17.6 204 1-226 213-452 (481)
10 2z0f_A Putative phosphoglucomu 100.0 1.7E-43 5.8E-48 329.6 14.0 202 7-226 261-499 (524)
11 3pmg_A Alpha-D-glucose-1,6-bis 100.0 9.7E-43 3.3E-47 326.5 15.8 210 1-225 255-516 (561)
12 1kfi_A Phosphoglucomutase 1; p 100.0 2.1E-41 7.1E-46 318.4 20.3 210 1-226 269-530 (572)
13 2dka_A Phosphoacetylglucosamin 100.0 3.2E-39 1.1E-43 301.9 11.4 211 2-226 258-524 (544)
14 1wjw_A Phosphoacetylglucosamin 98.7 2.4E-09 8.4E-14 79.7 0.6 60 163-226 5-74 (112)
15 3brc_A Conserved protein of un 77.2 3 0.0001 31.6 4.4 52 2-53 69-125 (156)
16 3dtg_A Branched-chain amino ac 52.0 47 0.0016 28.8 7.7 78 18-110 219-308 (372)
17 2jvf_A De novo protein M7; tet 50.7 31 0.0011 22.8 4.8 66 158-226 28-96 (96)
18 2hc5_A ORF 99, hypothetical pr 47.3 40 0.0014 24.4 5.5 50 13-62 42-97 (117)
19 2gk4_A Conserved hypothetical 42.4 68 0.0023 26.0 6.8 52 13-64 170-228 (232)
20 3he8_A Ribose-5-phosphate isom 37.7 45 0.0015 25.2 4.6 36 2-37 32-68 (149)
21 1vlj_A NADH-dependent butanol 36.6 30 0.001 30.2 4.0 33 2-35 78-110 (407)
22 1oj7_A Hypothetical oxidoreduc 35.6 29 0.001 30.3 3.8 33 2-35 83-115 (408)
23 3iv7_A Alcohol dehydrogenase I 34.5 36 0.0012 29.4 4.1 32 2-34 65-96 (364)
24 3ph3_A Ribose-5-phosphate isom 32.4 60 0.0021 25.1 4.6 36 2-37 52-88 (169)
25 3k7p_A Ribose 5-phosphate isom 32.2 58 0.002 25.4 4.5 36 2-37 56-92 (179)
26 3bfj_A 1,3-propanediol oxidore 31.4 42 0.0014 29.0 4.0 33 2-35 69-101 (387)
27 3hl0_A Maleylacetate reductase 30.9 45 0.0015 28.6 4.1 33 2-35 64-96 (353)
28 3dth_A Branched-chain amino ac 30.9 1.6E+02 0.0053 25.5 7.6 79 18-111 219-309 (372)
29 3eyt_A Uncharacterized protein 30.6 40 0.0014 24.1 3.3 36 14-49 79-130 (158)
30 3jzd_A Iron-containing alcohol 30.0 43 0.0015 28.8 3.8 32 2-34 66-97 (358)
31 3nol_A Glutamine cyclotransfer 29.9 34 0.0012 28.3 3.0 19 29-47 228-246 (262)
32 1p9o_A Phosphopantothenoylcyst 29.6 84 0.0029 26.6 5.5 34 14-47 241-276 (313)
33 1rrm_A Lactaldehyde reductase; 29.3 40 0.0014 29.1 3.5 33 2-35 65-97 (386)
34 1u7z_A Coenzyme A biosynthesis 28.9 1.1E+02 0.0037 24.6 5.8 51 14-64 154-217 (226)
35 3g12_A Putative lactoylglutath 28.6 65 0.0022 22.4 4.1 38 14-51 76-116 (128)
36 3mbr_X Glutamine cyclotransfer 26.1 44 0.0015 27.3 3.0 19 29-47 207-225 (243)
37 2vvr_A Ribose-5-phosphate isom 26.1 92 0.0032 23.5 4.6 26 12-37 44-69 (149)
38 3lor_A Thiol-disulfide isomera 25.8 65 0.0022 22.9 3.7 37 14-50 81-134 (160)
39 3qqz_A Putative uncharacterize 24.9 38 0.0013 27.7 2.5 22 29-50 30-52 (255)
40 3kol_A Oxidoreductase, glyoxal 24.8 1.3E+02 0.0044 20.9 5.2 38 13-50 107-146 (156)
41 4gxt_A A conserved functionall 24.5 53 0.0018 28.5 3.4 48 12-60 15-62 (385)
42 1xzo_A BSSCO, hypothetical pro 24.3 42 0.0014 24.4 2.4 23 13-35 54-79 (174)
43 4fak_A Ribosomal RNA large sub 24.3 56 0.0019 25.0 3.1 31 35-65 72-102 (163)
44 2a4x_A Mitomycin-binding prote 24.1 1.5E+02 0.005 20.4 5.4 39 12-50 82-123 (138)
45 1p0z_A Sensor kinase CITA; tra 24.0 93 0.0032 22.0 4.3 32 13-44 35-67 (131)
46 2pa8_L DNA-directed RNA polyme 23.8 44 0.0015 23.0 2.2 16 212-227 45-60 (92)
47 2iwa_A Glutamine cyclotransfer 22.9 55 0.0019 26.9 3.1 19 29-47 209-227 (266)
48 2obi_A PHGPX, GPX-4, phospholi 22.9 63 0.0022 24.0 3.2 15 18-32 102-116 (183)
49 1o1x_A Ribose-5-phosphate isom 22.8 1.1E+02 0.0039 23.1 4.6 26 12-37 55-80 (155)
50 3hcz_A Possible thiol-disulfid 22.7 1E+02 0.0034 21.3 4.2 6 42-47 117-122 (148)
51 3e5d_A Putative glyoxalase I; 22.3 1.8E+02 0.006 19.3 5.9 39 12-50 82-123 (127)
52 1nki_A Probable fosfomycin res 21.4 1.4E+02 0.0048 20.5 4.8 36 13-48 72-107 (135)
53 3rf7_A Iron-containing alcohol 21.0 66 0.0022 27.9 3.3 33 2-35 83-118 (375)
54 3sgw_A Ribose 5-phosphate isom 20.9 1.3E+02 0.0045 23.5 4.6 26 12-37 75-100 (184)
55 3ox4_A Alcohol dehydrogenase 2 20.9 45 0.0016 28.8 2.2 32 2-34 65-96 (383)
56 1vm6_A DHPR, dihydrodipicolina 20.3 3.4E+02 0.012 21.8 8.4 58 19-102 29-89 (228)
No 1
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=1.4e-49 Score=367.15 Aligned_cols=212 Identities=25% Similarity=0.407 Sum_probs=185.1
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCH
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~ 80 (228)
+||+++|||+++++++.+.+.|++.+||+||++||||||++++|++|++++||++++|+++|++++.++..||+|++||.
T Consensus 231 ~Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~~~alla~~ll~~~~~~~vv~~v~ss~ 310 (485)
T 3uw2_A 231 NFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTR 310 (485)
T ss_dssp TCCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSSCEEEECTTSCBCCHHHHHHHHHHHHHHHSTTCEEEEETTSCT
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCCeEEEEeCCCceECHHHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence 59999999999999999999999999999999999999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCc-CCCHHHHHHHHHHHHHHHhhcCCCC
Q 027073 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDE 159 (228)
Q Consensus 81 ~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~-~~Dgi~a~~~ll~e~~a~~~~~~~~ 159 (228)
.++++++++|+++++|+||||||+++|++.+. +||||+|||++|+++++ ++||++++++++ |+++. ++
T Consensus 311 ~l~~~~~~~g~~~~~t~vG~k~i~~~m~~~~~-----~~ggE~SG~~~f~~~~~~~~Dgi~aal~ll-e~la~----~~- 379 (485)
T 3uw2_A 311 NLARWVREKGGEPLMWKTGHSLVKAKLRETGA-----PLAGEMSGHVFFKDRWYGFDDGLYTGARLL-EILAR----VA- 379 (485)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSCEEETTTTCSSBCHHHHHHHHH-HHHTT----SS-
T ss_pred HHHHHHHHcCCEEEEEcCChHHHHHHHHhhcc-----cceecccCcEeeccccCCCCcHHHHHHHHH-HHHHh----cC-
Confidence 99999999999999999999999999999876 89999999999998764 799999999877 99987 77
Q ss_pred CHHHHHHhccccccCceeEEEeccCccch-HHHHH-----------HHHHHHhhcccccceeeecCCCCCCceeEEEee
Q 027073 160 GIGSLIKDLEEPLESIELRMNIISEPRYA-KAKGS-----------EAIEEFRKYIEVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 160 ~L~~ll~~lp~~~~~~~~~i~~~~~~~~~-~~~~~-----------~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
+|+++++++|++|.+.+.+++|+++.+.. -++.. +.+||+|..+++||+|| |||||||+|||..
T Consensus 380 ~lsel~~~lp~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DGvrv~~~~gwvlv---RpSgTEP~lrv~~ 455 (485)
T 3uw2_A 380 DPSALLNGLPNAVSTPELQLKLEEGENVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLA---RSSNTTPVVVLRF 455 (485)
T ss_dssp CHHHHHHTSCCCEECCCEEC------CTHHHHHHHHSCCCTTCSEEECSSSEEEEETTEEEEE---EECSSSSSEEEEE
T ss_pred CHHHHHHHhhHhhCCceEEEeCCchhHHHHHHHHHhhhcccccccccccceEEEEeCCcEEEE---EecCCCCeEEEEE
Confidence 99999999999987667899998754321 11111 13466777778899999 9999999999974
No 2
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.3e-48 Score=354.47 Aligned_cols=206 Identities=17% Similarity=0.202 Sum_probs=182.8
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhC--CCCeEEEcccC
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH--PGTTIVTDART 78 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~--~~~~vv~~v~s 78 (228)
+||++.|||+ +++++.+.+.|++.+||+|+++||||||++++|++|++++||++++|+++|+++.+ ++..||.|++|
T Consensus 209 ~F~~~~p~p~-~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~g~~l~gd~i~~lla~~l~~~~~~~~~~vv~tv~s 287 (455)
T 2f7l_A 209 LFSARQPEPT-FDSLKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVKNPKAIKKIVTAVSS 287 (455)
T ss_dssp TCTTSCSSCC-TTTSHHHHHHHHHTTCSEEEECCTTSCCCEEEETTSCBCCHHHHHHHHHHHHHHTCTTSCSEEEEETTS
T ss_pred CCCCCCcCcc-hHHHHHHHHHHHHcCCCEEEEECCCCCeEEEEcCCCeEEChHHHHHHHHHHHHHhCccCCCeEEEEecc
Confidence 5999889998 58999999999999999999999999999999999999999999999999999976 45689999999
Q ss_pred CHHHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHHHhhcCCC
Q 027073 79 SMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSD 158 (228)
Q Consensus 79 s~~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a~~~~~~~ 158 (228)
|.+++++++++|+++++|+||||||+++|.+.+. +||||+|||++|+++++++||++++++++ |+++. +|
T Consensus 288 s~~l~~~a~~~g~~~~~t~~G~k~i~~~m~~~~~-----~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~l-e~~a~----~g 357 (455)
T 2f7l_A 288 SSLVEEYLSKYNIQVDWTKVGSVDIAHKVADENA-----LAGFEENGGFMYPPHQYVRDGAMSFALML-ELLAN----EN 357 (455)
T ss_dssp CTHHHHHHHTTTCEEEEECSCHHHHHHHHHHTTC-----SEEEETTEEEEBTTTBSSCCHHHHHHHHH-HHHHH----HT
T ss_pred cHHHHHHHHHcCCEEEEEcCcHHHHHHHHHhcCc-----EEEEcCcCcEEECCcCCCCCHHHHHHHHH-HHHHh----hC
Confidence 9999999999999999999999999999998765 89999999999999999999999999887 99987 89
Q ss_pred CCHHHHHHhccccccCceeEEEeccCccchHHHHHHHHHH-----------------HhhcccccceeeecCCCCCCcee
Q 027073 159 EGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEE-----------------FRKYIEVLGLQKTNSHSANETIC 221 (228)
Q Consensus 159 ~~L~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~li~~-----------------~r~~~~~gw~lv~~~~ps~~ep~ 221 (228)
+||+|+++++|.++.. ..++.|+++.+. .++|+. +|..+++||++| |||||||+
T Consensus 358 ~~L~ell~~~~~~~~~-~~~v~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~DGlr~~~~~gw~lv---RpSgTEP~ 428 (455)
T 2f7l_A 358 VSSAELFDRLPKYYLV-KTKVDLKPGLMV-----EEIYKKILEVYSTSSVKAITIDGVKIIGKDFWFLV---RKSGTEPI 428 (455)
T ss_dssp CCHHHHHHTSCCCEEE-EEEEECCTTCCH-----HHHHHHHHHHHCCTTSEEECSSSEEEEETTEEEEE---EECSSSSE
T ss_pred CCHHHHHHhCCCCeee-eEeEEcCcHHHH-----HHHHHHHHHhchhcccccccCceEEEEeCCcEEEE---eeCCCCcE
Confidence 9999999999977654 677888764331 123444 444445889999 99999999
Q ss_pred EEEee
Q 027073 222 LIIQT 226 (228)
Q Consensus 222 ~~~~~ 226 (228)
||+..
T Consensus 429 irvy~ 433 (455)
T 2f7l_A 429 IRIMA 433 (455)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 3
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=1.4e-47 Score=352.31 Aligned_cols=207 Identities=28% Similarity=0.438 Sum_probs=186.3
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCH
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~ 80 (228)
+||++.|||+.+++++.+.+.|++.+||+|+++||||||++++|++|++++||++++|++++++++.++..||.|++||.
T Consensus 209 ~f~~~~p~p~~~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~L~a~~l~~~~~~~~vv~~v~ss~ 288 (463)
T 1p5d_X 209 NFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTR 288 (463)
T ss_dssp TCCSSCSCTTSGGGGHHHHHHHHHTTCSEEEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHHHSTTCEEEEETTSCT
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHhCCCEEEEECCCCCeEEEEeCCCcEeCHHHHHHHHHHHHHHhCCCCeEEEEecCcH
Confidence 59999999998899999999999999999999999999999999999999999999999999999888878999999999
Q ss_pred HHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCc-CCCHHHHHHHHHHHHHHHhhcCCCC
Q 027073 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDE 159 (228)
Q Consensus 81 ~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~-~~Dgi~a~~~ll~e~~a~~~~~~~~ 159 (228)
.++++++++|+++++|+||||||.++|++.+. .||||+|||++|++++. ++||++++++++ |+++. +|+
T Consensus 289 ~l~~~~~~~g~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~sG~~~~~~~~~~~~Dgi~aal~~l-e~~a~----~g~ 358 (463)
T 1p5d_X 289 RLIALISGYGGRPVMWKTGHSLIKKKMKETGA-----LLAGEMSGHVFFKERWFGFDDGIYSAARLL-EILSQ----DQR 358 (463)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSBEEETTTTCSSBCHHHHHHHHH-HHHHT----CSS
T ss_pred HHHHHHHHcCCEEEEeCCcHHHHHHHHHhcCC-----ceeecCCCcEEeccccCCCCcHHHHHHHHH-HHHHH----hCC
Confidence 99999999999999999999999999998775 79999999999999554 689999999887 99988 899
Q ss_pred CHHHHHHhccccccCceeEEEeccCccchHHHHHHHHH-----------------HHhhcccccceeeecCCCCCCceeE
Q 027073 160 GIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIE-----------------EFRKYIEVLGLQKTNSHSANETICL 222 (228)
Q Consensus 160 ~L~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~li~-----------------~~r~~~~~gw~lv~~~~ps~~ep~~ 222 (228)
+|+|++++||++|.+.+.++.|+++.+ .++|+ |+|..+++||++| |||||||+|
T Consensus 359 ~Ls~ll~~l~~~~~~~~~~v~~~~~~~------~~~~~~l~~~~~~~~~~~~~~DGlr~~~~~gw~lv---RpSgTEP~~ 429 (463)
T 1p5d_X 359 DSEHVFSAFPSDISTPEINITVTEDSK------FAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLV---RASNTTPVL 429 (463)
T ss_dssp CHHHHHHTSCCCEECCCEEEECCTTTH------HHHHHHHHHHCCCCSSEEECSSSEEEEETTEEEEE---EECSSSSEE
T ss_pred CHHHHHHHhhHhhCceeEEEEcCchhH------HHHHHHHHhccccCCCcccccceEEEEecCcEEEE---EecCCCceE
Confidence 999999999998876578888876432 12333 4445567899999 999999999
Q ss_pred EEee
Q 027073 223 IIQT 226 (228)
Q Consensus 223 ~~~~ 226 (228)
||..
T Consensus 430 rvy~ 433 (463)
T 1p5d_X 430 VLRF 433 (463)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 4
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.7e-47 Score=349.80 Aligned_cols=210 Identities=25% Similarity=0.292 Sum_probs=183.5
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCH
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~ 80 (228)
+||++.|+|. +++++.+.+.+++.+||+|+++||||||++++|++|++++||++++|+++++++..++..||.|++||.
T Consensus 211 ~f~~~~~~p~-~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~~~~~vv~tv~ss~ 289 (455)
T 1wqa_A 211 YFPARNPEPN-EENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKGGGLLVTTVATSN 289 (455)
T ss_dssp TCSSSCSCCC-TTTTHHHHHHHHHHTCSEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHHHTSCEEEEETTSCT
T ss_pred CCCCCCCCCc-hhHHHHHHHHHHHcCCCEEEEECCCCCeEEEEeCCCCEEChhHHHHHHHHHHHHhCCCCeEEEeecCcH
Confidence 5999999996 799999999999999999999999999999999999999999999999999998876678999999999
Q ss_pred HHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHHHhhcCCCCC
Q 027073 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEG 160 (228)
Q Consensus 81 ~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a~~~~~~~~~ 160 (228)
+++++++++|+++++|+||||||.++|.+.+. +||||+|||++|+++++++||++++++++ |+++. +|+|
T Consensus 290 ~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~sgg~~~~~~~~~~Dgi~a~l~~l-e~l~~----~g~~ 359 (455)
T 1wqa_A 290 LLDDIAKKHGAKVMRTKVGDLIVARALYENNG-----TIGGEENGGVIFPEHVLGRDGAMTVAKVV-EIFAK----SGKK 359 (455)
T ss_dssp HHHHHHHHTTCEEEEECSSTTHHHHHHHHTTC-----SEEEETTEEEECTTTCSSCCHHHHHHHHH-HHHHH----HCSC
T ss_pred HHHHHHHHCCCEEEEEcCcHHHHHHHHHhCCc-----eEEEcCcCcEEECCcCcCccHHHHHHHHH-HHHHh----cCCC
Confidence 99999999999999999999999999998765 89999999999999999999999999887 99987 7999
Q ss_pred HHHHHHhccccccCceeEEEeccCccch-HHHH----------HHHHHHHhhcccccceeeecCCCCCCceeEEEee
Q 027073 161 IGSLIKDLEEPLESIELRMNIISEPRYA-KAKG----------SEAIEEFRKYIEVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 161 L~~ll~~lp~~~~~~~~~i~~~~~~~~~-~~~~----------~~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
|+|+++++|+++.. ..++.|+++ +.. -.+. +..+||+|..+++||++| |||||||+||+..
T Consensus 360 L~~~~~~l~~~~~~-~~~v~~~~~-~~~~~~~l~~~~~~~~~~~~~~DGlr~~~~~gw~lv---RpSgTEP~irvy~ 431 (455)
T 1wqa_A 360 FSELIDELPKYYQI-KTKRHVEGD-RHAIVNKVAEMARERGYTVDTTDGAKIIFEDGWVLV---RASGTEPIIRIFS 431 (455)
T ss_dssp HHHHHHTSCCCEEE-EECCBCCSS-HHHHHHHHHHHHHHTTCEEECTTSEEEECSSCEEEE---CCCSSSSBCCEEE
T ss_pred HHHHHHhcccccEe-eEeeEcCcH-HHHHHHHHHHhhHhhccccccCceEEEEecCcEEEE---EeCCCCceEEEEE
Confidence 99999999986543 577777754 310 0000 012445555566899999 9999999999864
No 5
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=5.2e-46 Score=342.20 Aligned_cols=207 Identities=20% Similarity=0.242 Sum_probs=176.8
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhC--CCCeEEEcccC
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH--PGTTIVTDART 78 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~--~~~~vv~~v~s 78 (228)
+||++.|+|.+ ++.+.+.|++.+||+||++||||||++++|++|++++||++++|+++++++.. ++..||.|++|
T Consensus 231 ~f~n~~~~~~~---~~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~Lla~~l~~~~~l~~~~vv~tv~s 307 (469)
T 3pdk_A 231 MNINDGVGSTH---PEVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLKHNTVVSTVMS 307 (469)
T ss_dssp SCTTSSCSTTS---THHHHHHHHHHTCSEEEEECTTSSBEEEEETTSCEECHHHHHHHHHHHHHHTTCSGGGEEEEETTS
T ss_pred CCCCCCCCCCC---HHHHHHHHHhcCCcEEEEECCCCCeEEEECCCCcEEChhHHHHHHHHHHHHhCCCCCCeEEEeecC
Confidence 47766666654 45567889999999999999999999999999999999999999999999875 35679999999
Q ss_pred CHHHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHHHhhcCCC
Q 027073 79 SMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSD 158 (228)
Q Consensus 79 s~~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a~~~~~~~ 158 (228)
|..++++++++|+++++|+||||||+++|.+.+. +||||+|||++|+++.+++||++++++++ ++++. +|
T Consensus 308 s~~l~~~~~~~G~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~SG~~~~~~~~~~~Dgi~aal~~l-e~l~~----~g 377 (469)
T 3pdk_A 308 NLGFYKALEANGITSDKTAVGDRYVMEEMKRGGY-----NLGGEQSGHIILLDYITTGDGMLSALQLV-NIMKM----TK 377 (469)
T ss_dssp CHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHTC-----CEEECTTSBEEETTTCSSCCHHHHHHHHH-HHHHH----HT
T ss_pred cHHHHHHHHHcCCEEEEEcCchHHHHHHHhhcCC-----eEEEcccCCEecCCCCCCCCHHHHHHHHH-HHHHH----cC
Confidence 9999999999999999999999999999998875 89999999999999999999999999887 88887 79
Q ss_pred CCHHHHHHhccccccCceeEEEeccCccch---HHHHHHHHHHHhhcc-cccceeeecCCCCCCceeEEEee
Q 027073 159 EGIGSLIKDLEEPLESIELRMNIISEPRYA---KAKGSEAIEEFRKYI-EVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 159 ~~L~~ll~~lp~~~~~~~~~i~~~~~~~~~---~~~~~~li~~~r~~~-~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
++|+++++++|+++ ...++|+++.+.. .....+.+++++..+ ++||+|| |||||||+|||..
T Consensus 378 ~~Lsel~~~l~~~~---~~~~~v~~~~k~~~~~~~~~~~~i~~~~~~~~~~gw~lv---RpSgTEP~lRv~~ 443 (469)
T 3pdk_A 378 KPLSELAGEMTKFP---QLLVNVRVTDKKLALENEKIKEIIRVVEEEMNGDGRILV---RPSGTEPLIRVMA 443 (469)
T ss_dssp CCHHHHHTTSCCCC---EEEEEECCSCHHHHTTCHHHHHHHHHHHHHCCSSCEEEE---ECCSSSCCEEEEE
T ss_pred CCHHHHHHHHhhcC---ceEEEEecCchhhhhccHHHHHHHHHHheEeCCCcEEEE---EeCCCCCEEEEEE
Confidence 99999999999863 3455666544321 112345677776554 6899999 9999999999974
No 6
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=2.8e-46 Score=343.75 Aligned_cols=212 Identities=17% Similarity=0.178 Sum_probs=172.0
Q ss_pred CCCCCCCCCCChhHHHHHHHHHH-hcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCC
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVL-ENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTS 79 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~-~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss 79 (228)
+||+++|||+ ++++..+.+.++ +.+||+|+++||||||++++|++|++++||++++|++++++++.++..||.|++||
T Consensus 216 ~Fp~~~p~p~-~~~~~~l~~~v~~~~~adlgia~DgDaDR~~vvd~~G~~l~gd~i~~Lla~~l~~~~~~~~vv~tv~ss 294 (464)
T 1tuo_A 216 LFHGVNPEPI-PKNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKGHRGRAVKNFAVT 294 (464)
T ss_dssp TGGGSCSCCS-GGGCHHHHHHHTTCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHTTCCSEEEEETTSC
T ss_pred CCCCCCcCCC-chhHHHHHHHHHhccCCCEEEEECCCCCeEEEEeCCCEEECHHHHHHHHHHHHHhhCCCCeEEEeecch
Confidence 5999999998 688999999999 99999999999999999999999999999999999999999865667899999999
Q ss_pred HHHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHHHhhcCCCC
Q 027073 80 MALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDE 159 (228)
Q Consensus 80 ~~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a~~~~~~~~ 159 (228)
.+++++++++|+++++|+||||||.++|++.+. +||||+|||++|+++.+++||++++++++ |+++. +|+
T Consensus 295 ~~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~l-e~~a~----~g~ 364 (464)
T 1tuo_A 295 WLLDRLGERLGFGVTTTPVGFKWIKEEFLKGDC-----FIGGEESGGVGYPEHLPERDGILTSLLLL-ESVAA----TGK 364 (464)
T ss_dssp THHHHHHHHHTCCEEEECSSHHHHHHHHTTTCE-----EEEECTTSBEEETTTEEEECHHHHHHHHH-HHHHH----HSC
T ss_pred HHHHHHHHHcCCeEEEecCcHHHHHHHHHhcCc-----EEEEccceeEEECCcCcCCCHHHHHHHHH-HHHHh----hCC
Confidence 999999999999999999999999999998654 99999999999999999999999999877 99987 799
Q ss_pred CHHHHHHhcccccc----CceeEEEeccCcc--chHH---------HHHHHHHHHhhcccccceeeecCCCCCCceeEEE
Q 027073 160 GIGSLIKDLEEPLE----SIELRMNIISEPR--YAKA---------KGSEAIEEFRKYIEVLGLQKTNSHSANETICLII 224 (228)
Q Consensus 160 ~L~~ll~~lp~~~~----~~~~~i~~~~~~~--~~~~---------~~~~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~ 224 (228)
||+|+++++|+.|. +...++.|+++.. .-.+ ..+..+||+|..+++||++| |||||||+||+
T Consensus 365 ~L~ell~~l~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~~~DGl~~~~~~~w~lv---RpSgTEP~lrv 441 (464)
T 1tuo_A 365 DLAEQFKEVEALTGLTHAYDRLDLPLKAPLDLTPFREPRPLAGLTPKGVDTLDGVKWLYEEAWVLF---RASGTEPVVRI 441 (464)
T ss_dssp CHHHHHHHHHHHHTCCCEEEEEC---------------CCCTTCCEEEEECSSSEEEEETTEEEEE---ECC-----CEE
T ss_pred CHHHHHHHHHHHcCccccceEEeEEeCCHHHHHhhhhhHhhCCCceeEEEcCCeEEEEECCEEEEE---EcCCCccEEEE
Confidence 99999977665553 2344555553210 0000 00123455677777899999 99999999998
Q ss_pred ee
Q 027073 225 QT 226 (228)
Q Consensus 225 ~~ 226 (228)
..
T Consensus 442 y~ 443 (464)
T 1tuo_A 442 YV 443 (464)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 7
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=3.5e-46 Score=341.32 Aligned_cols=209 Identities=18% Similarity=0.189 Sum_probs=177.7
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCH
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~ 80 (228)
+||++.|+|.. ++.+.+.|++.+||+||++||||||++++|++|++++||++++|+++++++..+...||.|++||.
T Consensus 209 ~f~n~~~~~~~---~~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~~~~~vv~tv~ss~ 285 (443)
T 3i3w_A 209 LNINVGCGATC---VSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICGGTNGIVGTQMTNM 285 (443)
T ss_dssp SCTTTTCSTTC---HHHHHHHHHHHTCSEEEEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTTTCCSCEEEETTSCH
T ss_pred CCCCCCCCCCC---HHHHHHHHHhcCCcEEEEECCCCceEEEECCCCcEeChhHHHHHHHHHHHHhCCCCeEEEeecCch
Confidence 47777777765 455678899999999999999999999999999999999999999999998766567999999999
Q ss_pred HHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHHHhhcCCCCC
Q 027073 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEG 160 (228)
Q Consensus 81 ~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a~~~~~~~~~ 160 (228)
.++++++++|+++++|+||||||+++|.+.+. +||||+|||++|+++++++||++++++++ ++++. +|++
T Consensus 286 ~l~~~~~~~G~~~~~t~~G~k~i~~~m~~~~~-----~~ggE~SG~~~~~~~~~~~Dgi~a~l~~l-e~l~~----~g~~ 355 (443)
T 3i3w_A 286 SYENHYRANKIPFIRSKVGDRYVLEDLVKYGY-----KIGGESSGHVINLNFGTTGDGLFTAIQLL-AIFSQ----ADKP 355 (443)
T ss_dssp HHHHHHHHTTCCEEEESSSTTHHHHHHHHHTC-----CEEECTTSBEEETTTCSSCCHHHHHHHHH-HHTTT----CSSC
T ss_pred HHHHHHHHCCCeEEEEeChHHHHHHHHhhcCc-----EEEEEeeCcEEEcCcCcCCCHHHHHHHHH-HHHHH----cCCC
Confidence 99999999999999999999999999998875 89999999999999999999999999887 88876 8999
Q ss_pred HHHHHHhccccccCceeEEEeccCccc-hHHHHHHHHHHHhhcc-cccceeeecCCCCCCceeEEEee
Q 027073 161 IGSLIKDLEEPLESIELRMNIISEPRY-AKAKGSEAIEEFRKYI-EVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 161 L~~ll~~lp~~~~~~~~~i~~~~~~~~-~~~~~~~li~~~r~~~-~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
|+++++++|+++.. ..++.|+...+- ......+.++.....+ ++||+|| |||||||+|||..
T Consensus 356 Lsel~~~~~~~p~~-~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~gw~lv---R~SgTEP~~rv~~ 419 (443)
T 3i3w_A 356 VSEFKLQGELMQQT-LINVPLTKKVAREDLQKVASDVNDVEKRLGNRGRVLL---RPSGTEPVLRVMV 419 (443)
T ss_dssp GGGTSCSSCCCEEE-EEEEECSSCCCHHHHHTTHHHHHHHHHHHGGGEEEEE---EEETTEEEEEEEE
T ss_pred HHHHHHhhhhhcce-EEEEEcCcccchhhHHHHHHHHHHHHHhcCCCcEEEE---ecCCCCceEEEEE
Confidence 99999999987543 678888633211 1222334555544433 5789999 9999999999974
No 8
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=9.7e-45 Score=340.52 Aligned_cols=208 Identities=15% Similarity=0.138 Sum_probs=174.6
Q ss_pred CCCCCCC--------CCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCC---
Q 027073 1 MFPNHIP--------NPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPG--- 69 (228)
Q Consensus 1 ~Fp~~~P--------nPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~--- 69 (228)
+||+++| ||+.+++++.+.+. +.+||||||+||||||++++|+ |++++||++++|+++|+++++++
T Consensus 289 ~F~~~~p~~~G~i~~~~~~~~al~~l~~~--~~~aDlgia~DgDaDR~~ivd~-g~~l~gd~~lal~a~~ll~~~~~~~~ 365 (570)
T 3na5_A 289 TFRFMHLDKDGAIRMDCSSECAMAGLLAL--RDKFDLAFANDPDYDRHGIVTP-AGLMNPNHYLAVAINYLFQHRPLWGK 365 (570)
T ss_dssp TCTTSBCCTTSSCCCCTTCTTTTHHHHTT--GGGCSEEEEECTTSCBEEEEET-TEECCHHHHHHHHHHHHTTSCTTSCT
T ss_pred CCCCCCCCcccccCCCCCChHHHHHHHHh--ccCCCEEEEECCCCCeEEEEEC-CEEECHhHHHHHHHHHHHHhCCCCCC
Confidence 4787655 67778888888765 8899999999999999999999 99999999999999999987653
Q ss_pred -CeEEEcccCCHHHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccC-----CCcCCCHHHHHH
Q 027073 70 -TTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKE-----NYFLDDGAYMVV 143 (228)
Q Consensus 70 -~~vv~~v~ss~~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~-----~~~~~Dgi~a~~ 143 (228)
..|+.|++||.+++++|+++|+++++|+||||||+++|.+.+. +||||||||++|.. +.+++||+++++
T Consensus 366 ~~~v~~t~vSs~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~~-----~~ggEeSgg~~f~~~~g~~~~~dkDGi~aal 440 (570)
T 3na5_A 366 DVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSF-----GFGGEESAGASFLRFDGTPWSTDKDGIIMCL 440 (570)
T ss_dssp TCEEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSE-----EEEEETTTEEEECCTTSCCSCSSCCHHHHHH
T ss_pred CceEEEeeCchHHHHHHHHHCCCceEEecccHHHHHHHHHhcCC-----eEEEeccCCcccccccccceeecCcHHHHHH
Confidence 4588899999999999999999999999999999999998664 89999999999986 677899999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHhccccccC-ceeEEEeccCccchHHHHH-----------------------------
Q 027073 144 KIIIQMVRMKLEGSDEGIGSLIKDLEEPLES-IELRMNIISEPRYAKAKGS----------------------------- 193 (228)
Q Consensus 144 ~ll~e~~a~~~~~~~~~L~~ll~~lp~~~~~-~~~~i~~~~~~~~~~~~~~----------------------------- 193 (228)
+++ ||++. +|++|++++++||++|.. .+.+++++ +.+..++..
T Consensus 441 ~~l-e~~a~----~g~~lsell~~l~~~yg~~~~~r~~~~--~~~~~k~~m~~l~~~~~~~~~~~g~~i~~~~~~~~~~~ 513 (570)
T 3na5_A 441 LAA-EITAV----TGKNPQEHYNELAARFGAPSYNRLQAS--ATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNG 513 (570)
T ss_dssp HHH-HHHHH----HSSCHHHHHHHHHHHHCCCEEEEEEEE--CCHHHHHHHHTCCGGGCCCSEETTEECCEEEEECTTTC
T ss_pred HHH-HHHHH----hCCCHHHHHHHHHHHhCCceeEEecCC--CCHHHHHHHHHhhhccCcchhhcCcceEEEeecccCCc
Confidence 777 99998 799999999999998843 34566665 221111111
Q ss_pred HHHHHHhhcccccceeeecCCCCCCceeEEEee
Q 027073 194 EAIEEFRKYIEVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 194 ~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
..+||+|..+++||++| |||||||+||+..
T Consensus 514 ~~iDGlkv~~~dgW~lv---RpSgTEP~lriy~ 543 (570)
T 3na5_A 514 ASIGGLKVMTDNGWFAA---RPSGTEDAYKIYC 543 (570)
T ss_dssp CEEEEEEEECSSEEEEE---EECSSSSEEEEEE
T ss_pred CCCCeEEEEecCcEEEE---EECCCCCeEEEEE
Confidence 11456677778899999 9999999999974
No 9
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=1.7e-43 Score=326.57 Aligned_cols=204 Identities=17% Similarity=0.128 Sum_probs=170.5
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCH
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~ 80 (228)
+||+++|+|..+++++.+.+.|++.+||+|||+||||||++++|++|++++||++++|+++++. ...|+.|++||.
T Consensus 213 ~f~~~~~~p~~~e~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~l~~L~a~~l~----~~~vv~~v~ss~ 288 (481)
T 4hjh_A 213 IFVPVDTEALRPEDIALLAQWGKSDRLDAIVSTDGDADRPLIADEHGQFVRGDLAGAITATWVG----ADTLVTPVTSNT 288 (481)
T ss_dssp SCCCCCTTSCCHHHHHHHHHHHTSTTCSEEEEECTTSSSEEEECTTSCEECHHHHHHHHHHHTT----CSEEEEETTSCT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCceEEEcCCCCEEChHHHHHHHHHHhh----cCcEEEEEcChH
Confidence 4888889998899999999999999999999999999999999999999999999999999873 236889999999
Q ss_pred HHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCC----------CcCCCHHHHHHHHHHHHH
Q 027073 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKEN----------YFLDDGAYMVVKIIIQMV 150 (228)
Q Consensus 81 ~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~----------~~~~Dgi~a~~~ll~e~~ 150 (228)
+++++ +| ++++|+|||+||.++|++....|..++||||||||++|+++ .+++||++++++++ |++
T Consensus 289 ~l~~~---~~-~~~~t~vG~~~i~~~m~~~~~~g~~~~~GgEeSgg~~~~~~~~~d~~~~~~~~~~Dgi~a~l~~l-e~~ 363 (481)
T 4hjh_A 289 ALESR---FP-KVLRTRVGSPYVIASMAQVSTGNSGPVIGFEANGGVLLGSTVERNGRSLTALPTRDALLPILACL-ATV 363 (481)
T ss_dssp THHHH---CS-CEEEECSSHHHHHHHHHHCC----CCEEEECTTCCEEECSCEEETTEEECCEEEEESHHHHHHHH-HHH
T ss_pred HHHHh---cC-ceEEeccchHHHHHHHHHhhccCCCeEEEEeCCCCEEECchhcccccccccCCCccHHHHHHHHH-HHH
Confidence 99887 55 99999999999999999865433346999999999999875 35899999999887 898
Q ss_pred HHhhcCCCCCHHHHHHhccccccCceeEEEeccCccchHHHHHHHHH-------------------------HHhhcccc
Q 027073 151 RMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIE-------------------------EFRKYIEV 205 (228)
Q Consensus 151 a~~~~~~~~~L~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~li~-------------------------~~r~~~~~ 205 (228)
+. +|++|++++++||++|.+.+..++|+++.+ .++|+ |+|..+++
T Consensus 364 a~----~g~~Lsell~~l~~~~~~~~~~~~~~~~~~------~~~m~~l~~~~~~~~~~~~~g~~~~v~~~DGlri~~~d 433 (481)
T 4hjh_A 364 HE----KKTPLSTIARSYGFRVALSDRLQNIPQEAS------TAFLALLEDADKRASLFPAGDAIVRVETIDGVKLFFQS 433 (481)
T ss_dssp HH----HTCCHHHHHHTTCCCEEEEEEEESCCHHHH------HHHHHHTTSHHHHHHHSCTTSCEEEEECSSSEEEEETT
T ss_pred HH----cCCCHHHHHHHHHHHhCCceeecCCCHHHH------HHHHHHHHhcCChHHHHhhcCccccccCCCeEEEEecC
Confidence 87 799999999999998865444445664322 23444 44445678
Q ss_pred c-ceeeecCCCCCCceeEEEee
Q 027073 206 L-GLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 206 g-w~lv~~~~ps~~ep~~~~~~ 226 (228)
| |++| |||||||+||+..
T Consensus 434 g~wvlv---RpSgTEP~lrvy~ 452 (481)
T 4hjh_A 434 GNAVHY---RASGNAPELRCYV 452 (481)
T ss_dssp SCEEEE---EECSSSSEEEEEE
T ss_pred CcEEEE---ecCCCCceEEEEE
Confidence 8 8999 9999999999974
No 10
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-43 Score=329.61 Aligned_cols=202 Identities=17% Similarity=0.134 Sum_probs=160.1
Q ss_pred CCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhC--CCCeEEEcccCCHHHHH
Q 027073 7 PNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH--PGTTIVTDARTSMALTK 84 (228)
Q Consensus 7 PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~--~~~~vv~~v~ss~~l~~ 84 (228)
|||+.+.+++.+.+ ++.+||+|||+||||||++++|++ ++++||++++|+++|+++.. ++..|+.+++||.++++
T Consensus 261 p~p~~~~~l~~~~~--~~~~aDlgia~DgDaDR~~vvd~~-~~l~gd~i~alla~~l~~~~~~~~~~vv~t~vss~~l~~ 337 (524)
T 2z0f_A 261 MDCSSPYAMAGLLA--LKDRFDLAIGNDPDADRHGIVTPR-GLMNPNHYLAAALHHLYTTRSWPGAKVGKTAVTSALLDR 337 (524)
T ss_dssp -----------CCC--CCCCSSEEEEECTTSCSEEEEETT-EECCHHHHHHHHHHHHHTTCCCTTCEEEEETTSCTHHHH
T ss_pred CCCCChhHHHHHHH--hhcCCCEEEEeCCccccceEEecC-ceechhHHHHHHHHHHHHhcCCCCCeEEEecccHHHHHH
Confidence 67766665544432 588999999999999999999999 89999999999999999876 45678999999999999
Q ss_pred HHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCC-----CcCCCHHHHHHHHHHHHHHHhhcCCCC
Q 027073 85 FITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKEN-----YFLDDGAYMVVKIIIQMVRMKLEGSDE 159 (228)
Q Consensus 85 ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~-----~~~~Dgi~a~~~ll~e~~a~~~~~~~~ 159 (228)
+++++|+++++|+||||||.++|.+.+. +||||||||++|+++ .+++||++++++++ |+++. +|+
T Consensus 338 ia~~~G~~~~~t~tG~k~i~~~m~~~~~-----~~ggEeSgg~~~~~~~~~~~~~~~Dgi~aal~~l-e~~a~----~g~ 407 (524)
T 2z0f_A 338 VAQALGREVYETPVGFKHFVAGLLEGWL-----GFAGEESAGASFLRFDGRPFSTDKDGILMGLLAA-ELMAK----RGQ 407 (524)
T ss_dssp HHHHTTCCEEEECSSTHHHHHHHHHSSE-----EEEEETTTEEEECCTTSCCSCSSCCHHHHHHHHH-HHHHH----HSS
T ss_pred HHHHhCceEEEcCCcHHHHHHHHhhCCc-----EEEEEccCcEEECCCCcccccccchHHHHHHHHH-HHHHH----hCC
Confidence 9999999999999999999999997654 899999999999987 88999999999877 99988 799
Q ss_pred CHHHHHHhccccccCc-eeEEEeccCccchHHHHHH-----------------------------HHHHHhhccccccee
Q 027073 160 GIGSLIKDLEEPLESI-ELRMNIISEPRYAKAKGSE-----------------------------AIEEFRKYIEVLGLQ 209 (228)
Q Consensus 160 ~L~~ll~~lp~~~~~~-~~~i~~~~~~~~~~~~~~~-----------------------------li~~~r~~~~~gw~l 209 (228)
||+|+++++|+.|.+. +.+++++ +.+..+...+ .++|+|..+++||++
T Consensus 408 ~L~ell~~l~~~~g~~~~~~~~~~--~~~~~k~~~~~l~~~~~~~~~~~~~~i~~~~~~~~g~~~~~dGlr~~~~~gwvl 485 (524)
T 2z0f_A 408 APDALYEALAEKLGRPYYARKDLP--VSPEAKARLARLSAKEVHPSTLAGEPVLQVLDRATGNGEPLGGIKVVAANAWFA 485 (524)
T ss_dssp CHHHHHHHHHHHHCCCEEEEEEEE--CCHHHHHHHTTCCTTTSCCSEETTEECCEEEEECTTTCCEEEEEEEECSSEEEE
T ss_pred CHHHHHHHHHHHhCcceeeeeccc--chHHHHHHHHHHhhcCCChHHhCCceeEEEEeccCCCCCCCCeEEEEECCeEEE
Confidence 9999999999988542 3444433 2111111110 155666666789999
Q ss_pred eecCCCCCCceeEEEee
Q 027073 210 KTNSHSANETICLIIQT 226 (228)
Q Consensus 210 v~~~~ps~~ep~~~~~~ 226 (228)
| |||||||+||+..
T Consensus 486 v---RpSgTEP~irvy~ 499 (524)
T 2z0f_A 486 V---RPSGTEDVAKVYA 499 (524)
T ss_dssp E---EECSSSSEEEEEE
T ss_pred E---EcCCCCCEEEEEE
Confidence 9 9999999999864
No 11
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=9.7e-43 Score=326.53 Aligned_cols=210 Identities=16% Similarity=0.127 Sum_probs=174.9
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHH-----hhCCCCeEEEc
Q 027073 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVL-----KEHPGTTIVTD 75 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll-----~~~~~~~vv~~ 75 (228)
+||+++|||+ ++++..+.+.|++.+||||+|+||||||++++|++|+++++|++++|++.+++ +..+...||.|
T Consensus 255 ~F~~~~P~P~-~~~~~~L~~~v~~~~aDlgia~DgDaDR~~ivd~~G~~v~~~~~lalla~~l~~~~~~~~~~~~~vv~t 333 (561)
T 3pmg_A 255 DFGGHHPDPN-LTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARS 333 (561)
T ss_dssp TGGGSCCCCS-TTTTHHHHHHHHTSCCSEEEEECTTSSCEEEEEGGGCBCCHHHHHHHHHHTGGGSHHHHHHCCCCEEEE
T ss_pred CCCCCCCCCC-hHHHHHHHHHHHhcCCCEEEEEcCCCCeEEEEeCCCcEECccHHHHHHHHHHHhhhhhHhcCCCeEEEE
Confidence 5899999997 67788899999999999999999999999999999999999999999999974 33333469999
Q ss_pred ccCCHHHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHHHhhc
Q 027073 76 ARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLE 155 (228)
Q Consensus 76 v~ss~~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a~~~~ 155 (228)
++||.+++++|+++|+++++|+||||||+++|.+.+. +||||||||+ +++|.+++||++++++++ ++++.
T Consensus 334 v~Ss~~ld~va~~~G~~v~~t~vG~k~i~~~m~~~~~-----~~gGEeS~G~-~~~~~~~kDGi~aal~~l-e~la~--- 403 (561)
T 3pmg_A 334 MPTSGALDRVANATKIALYETPTGWKFFGNLMDASKL-----SLCGEESFGT-GSDHIREKDGLWAVLAWL-SILAT--- 403 (561)
T ss_dssp TTSCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTCC-----SEEEETTTEE-EETTSSSCCHHHHHHHHH-HHHHH---
T ss_pred echHHHHHHHHHHcCCCEEEEeccHHHHHHHhccCCe-----EEEEEecCCc-CCCeeecCCHHHHHHHHH-HHHHH---
Confidence 9999999999999999999999999999999998664 8999999885 689999999999999887 99987
Q ss_pred CCCCCHHHHHHhcccccc-CceeEEE---eccCccch-HHHH--------------------------------------
Q 027073 156 GSDEGIGSLIKDLEEPLE-SIELRMN---IISEPRYA-KAKG-------------------------------------- 192 (228)
Q Consensus 156 ~~~~~L~~ll~~lp~~~~-~~~~~i~---~~~~~~~~-~~~~-------------------------------------- 192 (228)
+|++|+|+++++|+.|. +++.+.+ |+|+.++. ..+.
T Consensus 404 -~g~~lsell~~l~~~yG~~~~~r~d~~~~~~~~~~~vm~~L~~~~~~~~~~g~~~~~~~~~~~v~~~~~f~~~dpvd~~ 482 (561)
T 3pmg_A 404 -RKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGS 482 (561)
T ss_dssp -HCSCHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCC
T ss_pred -hCCCHHHHHHHHHHHhCcccccccccccCCHHHHHHHHHHHHhcCCcccccccccccccccceeeecccccccCcccCc
Confidence 79999999999999883 3345544 55433210 0000
Q ss_pred HHHHHHHhhccccc-ceeeecCCCCCCc---eeEEEe
Q 027073 193 SEAIEEFRKYIEVL-GLQKTNSHSANET---ICLIIQ 225 (228)
Q Consensus 193 ~~li~~~r~~~~~g-w~lv~~~~ps~~e---p~~~~~ 225 (228)
++..||+|..++|| |+++ |||||| |.||+-
T Consensus 483 v~~~dGvri~~~dgswvlv---RpSGte~~~P~lRvY 516 (561)
T 3pmg_A 483 VSKNQGLRLIFADGSRIIF---RLSGTGSAGATIRLY 516 (561)
T ss_dssp EECCCCEEEEETTSCEEEE---EEEECSSSCEEEEEE
T ss_pred cccCceEEEEeCCCCEEEE---ecCCCCCCCceEEEE
Confidence 01134566666776 9999 999999 999985
No 12
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=2.1e-41 Score=318.45 Aligned_cols=210 Identities=14% Similarity=0.067 Sum_probs=171.1
Q ss_pred CCCCCCCCCCChhHHHHHHHHH-------HhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhC-CCC-e
Q 027073 1 MFPNHIPNPEDKTAMALTRAAV-------LENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH-PGT-T 71 (228)
Q Consensus 1 ~Fp~~~PnPe~~~~l~~l~~~v-------~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~-~~~-~ 71 (228)
+||+++|||+ ++++..+.+.+ ++.+||+|||+||||||++++| +|++++++++++|++.+++..+ ++. .
T Consensus 269 ~Fp~~~p~P~-~~~~~~L~~~v~~~~~~a~~~~aDlgiA~DgDaDR~~vvd-~G~~v~~~~~l~ll~~~~l~~~~~g~~~ 346 (572)
T 1kfi_A 269 DFGGGHPDPN-LTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILG-RQFFVTPSDSLAVIAANANLIFKNGLLG 346 (572)
T ss_dssp TGGGSCCCCS-TTTTHHHHHHTTTTCCSCGGGSCSEEEEECTTSCBEEEEE-TTEEECHHHHHHHHHHTHHHHSTTCCCC
T ss_pred CCCCCCCCCC-chhHHHHHHHHhhhhccccccCCCeEEeeCCCCceeEEee-CCeEecccHhHHHHHHHHHHHhcCCCcE
Confidence 5999999997 67899999999 8999999999999999999999 8999999999999999998854 233 5
Q ss_pred EEEcccCCHHHHHHHHHcCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccceeccCCCcCCCHHHHHHHHHHHHHH
Q 027073 72 IVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVR 151 (228)
Q Consensus 72 vv~~v~ss~~l~~ia~~~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~~~ll~e~~a 151 (228)
||.|++||.+++++|+++|+++++|+||||||.+.|++.+. +||||||||+ ++++.+++||++++++++ |+++
T Consensus 347 Vv~~~~ss~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~~-----~~ggEeSgg~-~~~~~~~kDgi~a~l~~l-e~la 419 (572)
T 1kfi_A 347 AARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLI-----NLCGEESFGT-GSNHIREKDGIWAVLAWL-TILA 419 (572)
T ss_dssp EEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSC-----SEEEETTTEE-EETTSSSCCHHHHHHHHH-HHHH
T ss_pred EEEEeCchHHHHHHHHHcCCeEEEeCCcHHHHHHHHhcCCc-----EEEEeccCCc-cccccCCCccHHHHHHHH-HHHH
Confidence 99999999999999999999999999999999999987654 8999999996 789999999999999887 9998
Q ss_pred HhhcCCC---CCHHHHHHhcccccc-CceeEEEeccCccchHHHHHHHHHHHhh--------------------------
Q 027073 152 MKLEGSD---EGIGSLIKDLEEPLE-SIELRMNIISEPRYAKAKGSEAIEEFRK-------------------------- 201 (228)
Q Consensus 152 ~~~~~~~---~~L~~ll~~lp~~~~-~~~~~i~~~~~~~~~~~~~~~li~~~r~-------------------------- 201 (228)
. .+++| +||+|+++++++.|. +.+.+..+. +.+. ++..++|+.+|.
T Consensus 420 ~-~~~~g~~~~tL~ell~~l~~~yp~~~~~~~~~~--~~~~-~~~~~im~~l~~~~~~~g~~~~v~~~~d~~~~~~~~~~ 495 (572)
T 1kfi_A 420 H-KNKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYE--QVDS-AGANKMMEHLKTKFQYFEQLKQGNKADIYDYVDPVDQS 495 (572)
T ss_dssp H-HTSSCSSCCCHHHHHHHHHHHHCEEEEEEEEEE--EECH-HHHHHHHHHHHTTHHHHHTTSTTCEEEECCEECTTTCC
T ss_pred H-hccccCCCCCHHHHHHHHHHHcCceeEEeeeee--cCCH-HHHHHHHHHHHhhhhhhCCceeEEEeecccccCcccCC
Confidence 7 23322 299999999866552 223333322 1111 112345555544
Q ss_pred ---------ccccc-ceeeecCCCCCCce---eEEEee
Q 027073 202 ---------YIEVL-GLQKTNSHSANETI---CLIIQT 226 (228)
Q Consensus 202 ---------~~~~g-w~lv~~~~ps~~ep---~~~~~~ 226 (228)
.+++| |++| ||||||| +||+..
T Consensus 496 i~~~dglr~~~~dg~wvlv---RpSGTEP~~~~irvy~ 530 (572)
T 1kfi_A 496 VSKNQGVRFVFGDGSRIIF---RLSGTGSVGATIRIYF 530 (572)
T ss_dssp EECCCCEEEECTTSCEEEE---EECSSCSSSEEEEEEE
T ss_pred CCCCCeEEEEECCCeEEEE---ECCCCCCCCceEEEEE
Confidence 45677 9999 9999999 999863
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=3.2e-39 Score=301.94 Aligned_cols=211 Identities=13% Similarity=0.113 Sum_probs=165.8
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecCCCCeEEEE--eCCC--ccccchhHHHHHHHHHHhhCC---------
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVV--DNKG--NPINGDKLIALMSAIVLKEHP--------- 68 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~DgDR~~vv--d~~G--~~l~~d~~~~Ll~~~ll~~~~--------- 68 (228)
||++.|+|+.++.+..+.+.+....+|+|+|+||||||++++ |++| ++++||++++|+++|+++..+
T Consensus 258 ~~n~~~~~~~~~~~~~~~~~~~~~~aDlGiA~DgDaDR~~iv~~D~~G~~~~l~gd~i~aLla~~l~~~~~~~~~~~~~~ 337 (544)
T 2dka_A 258 LLNFDCGADYVKTNQKLPKNVKPVNNKLYASFDGDADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISL 337 (544)
T ss_dssp GTTSSCSHHHHHHHCSCCTTCCCCBTCCEEEECTTSCCEEEEEECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCC
T ss_pred cCCCCCCccchhhhhhhhhhhhcccccEEEEECCCCCceEEEEEcCCCCeEEeCHHHHHHHHHHHHHHhcccCCCccccc
Confidence 677777776555554444444557789999999999999999 9999 689999999999999998633
Q ss_pred CCeEEEcccCCHHHHHHHHH-cCCeEEEEecchHHHHHHHhhcCcCCcceeEEeecccc--eeccCCC------------
Q 027073 69 GTTIVTDARTSMALTKFITD-RGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGH--GALKENY------------ 133 (228)
Q Consensus 69 ~~~vv~~v~ss~~l~~ia~~-~g~~v~~t~vG~k~i~~~~~~~~~~~~~~~~g~E~sg~--~~~~~~~------------ 133 (228)
...||.|+++|..+.+.+++ +|+++++|+|||||+.++|.+.+. .||||+||| ++|++++
T Consensus 338 ~~~vv~tv~sn~~~~~~i~~~~G~~v~~t~vG~k~v~~~m~~~~~-----~~ggE~sGhg~~if~~~~~~~~~~~~~~~~ 412 (544)
T 2dka_A 338 NIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGVKHLHHEAENFDI-----GVYFEANGHGTVIFNPEAEKKIFDYKPNND 412 (544)
T ss_dssp CEEEEECTTSCHHHHHHHHHTSCCCEEECCSSHHHHHHHHTTSSE-----EEEECTTSCEEEEECHHHHHHHHHCCCSSH
T ss_pred CCcEEEEeccccHHHHHHHHHcCCceEEEeCcHHHHHHHHHhcCC-----cEEEcccCCeeEEECchhhhhhcccccCCh
Confidence 23699998988888777776 999999999999999999998775 899999999 8999873
Q ss_pred ------------------cCCCHHHHHHHHHHHHHHHhhcCCCCCHHHHHHhccccccCceeEEEeccCccc--------
Q 027073 134 ------------------FLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRY-------- 187 (228)
Q Consensus 134 ------------------~~~Dgi~a~~~ll~e~~a~~~~~~~~~L~~ll~~lp~~~~~~~~~i~~~~~~~~-------- 187 (228)
.++||+.++++++ ++++. .|++++++...+|.++.. ..++.|++..+.
T Consensus 413 ~~kd~~~~~~~~~~l~a~~tgd~l~~~l~vl-~~~~~----~g~~lsel~~~~~~~p~~-~~~v~v~~~~~~~~~~~~~~ 486 (544)
T 2dka_A 413 NEAKAIKVLQNFSQLINQTVGDAISDLLAVL-IVVHY----LKLSPSDWDNEYTDLPNK-LVKVIVPDRSIFKTTNAERT 486 (544)
T ss_dssp HHHHHHHHHHHHHHHSCSSSCCHHHHHHHHH-HHHHH----TTCCHHHHHTTSCCCCEE-EEEC-------CCCCTTTC-
T ss_pred hHHHHHHHHHHHHHHhhcccCCCHHHHHHHH-HHHHH----hCCCHHHHHhhhhccCch-hhccccchhhhhhHHHhhhh
Confidence 5699999998877 88887 899999999999876543 567777654320
Q ss_pred --hHHHHHHHHHHHhhcccccceeeecCCCCCCceeEEEee
Q 027073 188 --AKAKGSEAIEEFRKYIEVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 188 --~~~~~~~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
........+||+|..+++||++| |||||||+|||..
T Consensus 487 ~~~~~~~~~~iDGv~~~~~~gw~lv---RpSGTEP~lRvy~ 524 (544)
T 2dka_A 487 LVEPKGMQDEIDKLVAQYPNGRSFV---RASGTEDAVRVYA 524 (544)
T ss_dssp CC-CTTHHHHHHHHHTTSTTCEEEE---EEC----CEEEEE
T ss_pred hcCchhhhcccceEEEEcCCEEEEE---EcCCCCCEEEEEE
Confidence 11234678999999999999999 9999999999964
No 14
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=98.69 E-value=2.4e-09 Score=79.73 Aligned_cols=60 Identities=10% Similarity=-0.003 Sum_probs=44.7
Q ss_pred HHHHhccccccCceeEEEeccCcc---------c-hHHHHHHHHHHHhhcccccceeeecCCCCCCceeEEEee
Q 027073 163 SLIKDLEEPLESIELRMNIISEPR---------Y-AKAKGSEAIEEFRKYIEVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 163 ~ll~~lp~~~~~~~~~i~~~~~~~---------~-~~~~~~~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
++++.+|.|+.. ..++.|++..+ - .....++.+|++|..+.+||++| |||||||+|||..
T Consensus 5 ~l~~~~~~yp~~-~~nv~v~~k~~v~~~~~e~~~~~~~~~~~~idgl~~~~~~gwvlv---RpSGTEP~irvy~ 74 (112)
T 1wjw_A 5 SSGAIYVDLPNR-QLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVKKYTLARAFV---RPSGTEDIVRVYA 74 (112)
T ss_dssp CCCSCCCCCCEE-EEEECCCCSSSSTTSCCCCSSSSSTTHHHHHHHHHHHSSSEEEEE---ECSSSSSSEEEEE
T ss_pred HHHHhhhhhcEe-eeEEEcCChhHHHHHHHHHhhccchhhhhhhhcEEEEcCCcEEEE---EeCCCccEEEEEE
Confidence 345567776544 67888876432 0 12334689999999998889999 9999999999864
No 15
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=77.16 E-value=3 Score=31.58 Aligned_cols=52 Identities=15% Similarity=0.158 Sum_probs=37.8
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEE-----ecCCCCeEEEEeCCCccccch
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVV-----FDTDVDRSGVVDNKGNPINGD 53 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia-----~D~DgDR~~vvd~~G~~l~~d 53 (228)
+||..++=....++....-.+...+||+.|| .-|.|.=+.+.|++|+++++.
T Consensus 69 i~Tn~aDlTRmPA~~K~LmAvD~~dADlvIARGRLGvPGSGSmLvimD~kGRiLtas 125 (156)
T 3brc_A 69 FNTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSLLVIMDSRGRLLSAA 125 (156)
T ss_dssp SCCGGGGGSSSHHHHHHHHHHHHHCCSEEEEEEECSSTTSCEEEEEEETTSCEEEEE
T ss_pred ccCcchhcccCcHHHHHHHheeccCCcEEEEcccccCCCCccEEEEEcCCCcEEeec
Confidence 4554444444445666666778889999998 467788788889999998763
No 16
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=51.99 E-value=47 Score=28.76 Aligned_cols=78 Identities=17% Similarity=0.026 Sum_probs=50.6
Q ss_pred HHHHHHhcCCcEEEEecCCCCe---------EEEEe---CCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCHHHHHH
Q 027073 18 TRAAVLENNADLGVVFDTDVDR---------SGVVD---NKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKF 85 (228)
Q Consensus 18 l~~~v~~~~adlgia~D~DgDR---------~~vvd---~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~~l~~i 85 (228)
.+..+++.++|=++.+|++.+. +++|. .+|.+++|.- ...+ .+=.|-+.|-++
T Consensus 219 a~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl--------------~~~i-L~GITR~sVi~L 283 (372)
T 3dtg_A 219 AQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPEL--------------SGSL-LPGITRDSLLQL 283 (372)
T ss_dssp HHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCC--------------CSSS-CCCHHHHHHHHH
T ss_pred HHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCc--------------cccc-cccHHHHHHHHH
Confidence 3556678899999999987664 34442 2345555520 1112 222334456689
Q ss_pred HHHcCCeEEEEecchHHHHHHHhhc
Q 027073 86 ITDRGGNHCLYRVGYRNVIDKGVHL 110 (228)
Q Consensus 86 a~~~g~~v~~t~vG~k~i~~~~~~~ 110 (228)
|++.|.+|.+.++....+.++....
T Consensus 284 A~~~Gi~V~Er~it~~El~~A~~~~ 308 (372)
T 3dtg_A 284 ATDAGFAVEERKIDVDEWQKKAGAG 308 (372)
T ss_dssp HHHHTCEEEECCCBHHHHHHHHHHT
T ss_pred HHHCCceEEEEeCCHHHHHHHhhcC
Confidence 9999999999999888777665443
No 17
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=50.73 E-value=31 Score=22.83 Aligned_cols=66 Identities=11% Similarity=0.175 Sum_probs=35.4
Q ss_pred CCCHHHHHHhccccc---cCceeEEEeccCccchHHHHHHHHHHHhhcccccceeeecCCCCCCceeEEEee
Q 027073 158 DEGIGSLIKDLEEPL---ESIELRMNIISEPRYAKAKGSEAIEEFRKYIEVLGLQKTNSHSANETICLIIQT 226 (228)
Q Consensus 158 ~~~L~~ll~~lp~~~---~~~~~~i~~~~~~~~~~~~~~~li~~~r~~~~~gw~lv~~~~ps~~ep~~~~~~ 226 (228)
|+.|...+.++.+.. ......+.++.+..+..+...+++.++-..+.---+-+ |-.|||-.+-+|.
T Consensus 28 gkeleralqelekalaragarnvqitisaendeqakelleliarllqklgykdinv---rvngtevkievrv 96 (96)
T 2jvf_A 28 GKELERALQELEKALARAGARNVQITISAENDEQAKELLELIARLLQKLGYKDINV---RVNGTEVKIEVRV 96 (96)
T ss_dssp SSHHHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHHHHHTCSEEEE---EEETTEEEEEEEC
T ss_pred cHHHHHHHHHHHHHHHhccccceEEEEEecChHHHHHHHHHHHHHHHHhCCCceEE---EEcCEEEEEEEeC
Confidence 444444444443322 22234444554454455555677766655443233444 8889998887763
No 18
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=47.27 E-value=40 Score=24.37 Aligned_cols=50 Identities=8% Similarity=0.173 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHhcCCcEEEEecCCCCeEEE--EeCC-C---ccccchhHHHHHHHH
Q 027073 13 TAMALTRAAVLENNADLGVVFDTDVDRSGV--VDNK-G---NPINGDKLIALMSAI 62 (228)
Q Consensus 13 ~~l~~l~~~v~~~~adlgia~D~DgDR~~v--vd~~-G---~~l~~d~~~~Ll~~~ 62 (228)
++++.+.+.+...+.+|=|..|.+.+|+.| +|.+ | +-+.+++++.|.+..
T Consensus 42 ~av~~lN~~~~~~n~~L~F~vdee~~~~vVkVvD~~TgEVIRqIPpEe~L~l~~~l 97 (117)
T 2hc5_A 42 EMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAM 97 (117)
T ss_dssp HHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCChHHHHHHHHHH
Confidence 456666777777889999999999999554 4754 7 567889988887654
No 19
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=42.42 E-value=68 Score=25.96 Aligned_cols=52 Identities=17% Similarity=0.260 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHhcCCcEEEEecCC-----CCeEEEEeCCCcc--ccchhHHHHHHHHHH
Q 027073 13 TAMALTRAAVLENNADLGVVFDTD-----VDRSGVVDNKGNP--INGDKLIALMSAIVL 64 (228)
Q Consensus 13 ~~l~~l~~~v~~~~adlgia~D~D-----gDR~~vvd~~G~~--l~~d~~~~Ll~~~ll 64 (228)
..++..++...+.++|+.++.|-. -.++.+++.+|.. .+-.++...+.+.+.
T Consensus 170 ~l~~~A~~kL~~k~~D~IvaN~v~~f~~~~n~v~li~~~~~~~~~sK~eiA~~I~~~i~ 228 (232)
T 2gk4_A 170 HLVDIARKSLIKNQADLIIANDLTQISADQHRAIFVEKNQLQTVQTKEEIAELLLEKIQ 228 (232)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEGGGBCSSCBCEEEECSSCEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEecccccCcCceEEEEEECCCcccCCCHHHHHHHHHHHHH
Confidence 467778888889999999999864 4558888888722 233455555555554
No 20
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=37.70 E-value=45 Score=25.23 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=23.3
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHhcCCcEEEEecCCC
Q 027073 2 FPNHIPNPED-KTAMALTRAAVLENNADLGVVFDTDV 37 (228)
Q Consensus 2 Fp~~~PnPe~-~~~l~~l~~~v~~~~adlgia~D~Dg 37 (228)
|++..+++.+ |..-..+.+.|.+.++|+||.+.|-|
T Consensus 32 ~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 68 (149)
T 3he8_A 32 FGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 68 (149)
T ss_dssp CCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 4444445444 55666777888888888887776543
No 21
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=36.60 E-value=30 Score=30.20 Aligned_cols=33 Identities=9% Similarity=0.067 Sum_probs=28.4
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecC
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDT 35 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~ 35 (228)
|++..|||. .+.+..+.+.+++.++|+.|++=|
T Consensus 78 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavGG 110 (407)
T 1vlj_A 78 VSGVKPNPV-LSKVHEAVEVAKKEKVEAVLGVGG 110 (407)
T ss_dssp ECCCCSSCB-HHHHHHHHHHHHHTTCSEEEEEES
T ss_pred ecCccCCCC-HHHHHHHHHHHHhcCCCEEEEeCC
Confidence 677889995 788999999999999999998844
No 22
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=35.60 E-value=29 Score=30.28 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=28.4
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecC
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDT 35 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~ 35 (228)
|++..|||. .+.+..+.+.+++.++|+.|++=|
T Consensus 83 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavGG 115 (408)
T 1oj7_A 83 FGGIEPNPA-YETLMNAVKLVREQKVTFLLAVGG 115 (408)
T ss_dssp ECCCCSSCB-HHHHHHHHHHHHHHTCCEEEEEES
T ss_pred eCCcCCCcC-HHHHHHHHHHHHHcCCCEEEEeCC
Confidence 777889995 788899999999999999998844
No 23
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=34.45 E-value=36 Score=29.40 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=27.1
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEec
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D 34 (228)
|++..|||. .+.++.+.+.+++.++|+.|++=
T Consensus 65 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 96 (364)
T 3iv7_A 65 HDEVVMHVP-IEVAERARAVATDNEIDLLVCVG 96 (364)
T ss_dssp ECCCCTTCB-HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EcceecCCC-HHHHHHHHHHHHhcCCCEEEEeC
Confidence 677889995 78899999999999999888764
No 24
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=32.45 E-value=60 Score=25.09 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=22.9
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHhcCCcEEEEecCCC
Q 027073 2 FPNHIPNPED-KTAMALTRAAVLENNADLGVVFDTDV 37 (228)
Q Consensus 2 Fp~~~PnPe~-~~~l~~l~~~v~~~~adlgia~D~Dg 37 (228)
|++..+++.+ |..-..+.+.|.+.++|+||.+.|-|
T Consensus 52 ~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 88 (169)
T 3ph3_A 52 FGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 88 (169)
T ss_dssp CCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 4444444444 55666677788887888887776543
No 25
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=32.20 E-value=58 Score=25.43 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=23.1
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHhcCCcEEEEecCCC
Q 027073 2 FPNHIPNPED-KTAMALTRAAVLENNADLGVVFDTDV 37 (228)
Q Consensus 2 Fp~~~PnPe~-~~~l~~l~~~v~~~~adlgia~D~Dg 37 (228)
|++..+++.+ |..-..+.+.|.+.++|+||.+.|-|
T Consensus 56 ~G~~s~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTG 92 (179)
T 3k7p_A 56 CGPKTAESVDYPDFASRVAEMVARKEVEFGVLAAGSG 92 (179)
T ss_dssp CSCSSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEccCc
Confidence 4444455544 55666677788887888887776543
No 26
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=31.44 E-value=42 Score=28.98 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=27.8
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecC
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDT 35 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~ 35 (228)
|++..|||. .+.+..+.+.+++.++|+.|++=|
T Consensus 69 ~~~~~~~p~-~~~v~~~~~~~~~~~~d~IIavGG 101 (387)
T 3bfj_A 69 FDGVEPNPK-DTNVRDGLAVFRREQCDIIVTVGG 101 (387)
T ss_dssp ECCCCSSCB-HHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ECCccCCCC-HHHHHHHHHHHHhcCCCEEEEeCC
Confidence 667789995 788999999999999998888743
No 27
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=30.91 E-value=45 Score=28.61 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=27.3
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecC
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDT 35 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~ 35 (228)
|++..|||. .+.++.+.+.+++.++|+.|++=|
T Consensus 64 ~~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavGG 96 (353)
T 3hl0_A 64 FSEAAMHTP-VEVTKTAVEAYRAAGADCVVSLGG 96 (353)
T ss_dssp ECCCCTTCB-HHHHHHHHHHHHHTTCSEEEEEES
T ss_pred ecCcCCCCc-HHHHHHHHHHHhccCCCEEEEeCC
Confidence 667789995 788899999999999998888743
No 28
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=30.89 E-value=1.6e+02 Score=25.52 Aligned_cols=79 Identities=15% Similarity=0.036 Sum_probs=48.5
Q ss_pred HHHHHHhcCCcEEEEecC--CCC-------eEEEEeCC--C-ccccchhHHHHHHHHHHhhCCCCeEEEcccCCHHHHHH
Q 027073 18 TRAAVLENNADLGVVFDT--DVD-------RSGVVDNK--G-NPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKF 85 (228)
Q Consensus 18 l~~~v~~~~adlgia~D~--DgD-------R~~vvd~~--G-~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~~l~~i 85 (228)
..+.+++.++|=++.+|+ +|- -++++.++ | .+++|.. ...++-.+ +-..+-++
T Consensus 219 a~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~~~g~~l~TP~l--------------~~~iL~GI-TR~~vl~l 283 (372)
T 3dth_A 219 AQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPEL--------------SGSLLPGI-TRDSLLQL 283 (372)
T ss_dssp HHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCC--------------CSSSCCCH-HHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEECCCCceEEEECCC--------------CCCcCHHH-HHHHHHHH
Confidence 355667889999999998 542 23334322 2 4444420 11122222 23344568
Q ss_pred HHHcCCeEEEEecchHHHHHHHhhcC
Q 027073 86 ITDRGGNHCLYRVGYRNVIDKGVHLN 111 (228)
Q Consensus 86 a~~~g~~v~~t~vG~k~i~~~~~~~~ 111 (228)
|++.|.+|.+.++....+.+..++..
T Consensus 284 a~~~G~~v~Er~i~~~eL~~a~~~g~ 309 (372)
T 3dth_A 284 ATDAGFAVEERKIDVDEWQKKAGAGE 309 (372)
T ss_dssp HHHHTCEEEECCCBHHHHHHHHHHTS
T ss_pred HHHCCCeEEEEECCHHHHHhhhhcCC
Confidence 88899999999999888877765543
No 29
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=30.58 E-value=40 Score=24.11 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCC----------------eEEEEeCCCcc
Q 027073 14 AMALTRAAVLENNADLGVVFDTDVD----------------RSGVVDNKGNP 49 (228)
Q Consensus 14 ~l~~l~~~v~~~~adlgia~D~DgD----------------R~~vvd~~G~~ 49 (228)
..+.+.+.+.+.+.++-+..|+++. ...++|.+|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i 130 (158)
T 3eyt_A 79 TPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDL 130 (158)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEE
T ss_pred CHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCE
Confidence 4555667777777777777787774 26677777754
No 30
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=29.97 E-value=43 Score=28.80 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=26.8
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEec
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D 34 (228)
|++..|||. .+.++.+.+.+++.++|+.|++=
T Consensus 66 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 97 (358)
T 3jzd_A 66 YAGAVMHVP-IESARDATARAREAGADCAVAVG 97 (358)
T ss_dssp ECCCCTTCB-HHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ecCCcCCCC-HHHHHHHHHHhhccCCCEEEEeC
Confidence 667789995 77888899999999999888864
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=29.85 E-value=34 Score=28.32 Aligned_cols=19 Identities=21% Similarity=0.211 Sum_probs=17.1
Q ss_pred EEEEecCCCCeEEEEeCCC
Q 027073 29 LGVVFDTDVDRSGVVDNKG 47 (228)
Q Consensus 29 lgia~D~DgDR~~vvd~~G 47 (228)
=|||+||+.+|+.+....+
T Consensus 228 NGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EEEEEETTTTEEEEEETTC
T ss_pred EEEEEcCCCCEEEEECCCC
Confidence 6999999999999887776
No 32
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=29.55 E-value=84 Score=26.65 Aligned_cols=34 Identities=12% Similarity=-0.044 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhcCCcEEEEecC--CCCeEEEEeCCC
Q 027073 14 AMALTRAAVLENNADLGVVFDT--DVDRSGVVDNKG 47 (228)
Q Consensus 14 ~l~~l~~~v~~~~adlgia~D~--DgDR~~vvd~~G 47 (228)
.++...+...+.++|+.++.|- |-.++.+++.+|
T Consensus 241 l~~~A~~kL~~k~~DlIVaN~l~~~~n~v~li~~~~ 276 (313)
T 1p9o_A 241 VINRARKALEIYQHQVVVANILESRQSFVLIVTKDS 276 (313)
T ss_dssp HHHHHHHHHHHHCCSEEEEEC------CEEEEETTE
T ss_pred HHHHHHHHHHHcCCCEEEEecCcCCccEEEEEECCC
Confidence 5677788888999999999996 445588888887
No 33
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=29.26 E-value=40 Score=29.08 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=27.8
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEecC
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDT 35 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D~ 35 (228)
|++..|||. .+.+..+.+.+++.++|+.|++=|
T Consensus 65 ~~~~~~~p~-~~~v~~~~~~~~~~~~d~IIavGG 97 (386)
T 1rrm_A 65 YDGVVPNPT-ITVVKEGLGVFQNSGADYLIAIGG 97 (386)
T ss_dssp ECBCCSSCB-HHHHHHHHHHHHHHTCSEEEEEES
T ss_pred ECCccCCCC-HHHHHHHHHHHHhcCcCEEEEeCC
Confidence 566789995 788999999999999999888743
No 34
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=28.89 E-value=1.1e+02 Score=24.60 Aligned_cols=51 Identities=18% Similarity=0.155 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCCcEEEEecCC-------CCe--EEEEeCCCcc----ccchhHHHHHHHHHH
Q 027073 14 AMALTRAAVLENNADLGVVFDTD-------VDR--SGVVDNKGNP----INGDKLIALMSAIVL 64 (228)
Q Consensus 14 ~l~~l~~~v~~~~adlgia~D~D-------gDR--~~vvd~~G~~----l~~d~~~~Ll~~~ll 64 (228)
.++.+.+...+.++|+.++.|-. +|. +.+++.+|.. .+..++..-+.+.+.
T Consensus 154 l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK~~vA~~I~~~i~ 217 (226)
T 1u7z_A 154 VEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIV 217 (226)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCHHHHHHHHHHHHH
Confidence 56777888889999999999987 555 8888887732 234555555555443
No 35
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=28.60 E-value=65 Score=22.42 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCc-E--EEEecCCCCeEEEEeCCCcccc
Q 027073 14 AMALTRAAVLENNAD-L--GVVFDTDVDRSGVVDNKGNPIN 51 (228)
Q Consensus 14 ~l~~l~~~v~~~~ad-l--gia~D~DgDR~~vvd~~G~~l~ 51 (228)
.++.+.+.+++.++. + .....+.|.|+.+.|++|+.+.
T Consensus 76 dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~ie 116 (128)
T 3g12_A 76 DLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIE 116 (128)
T ss_dssp CHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEE
T ss_pred CHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEE
Confidence 477888888899988 4 2344567888777799997653
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=26.08 E-value=44 Score=27.25 Aligned_cols=19 Identities=32% Similarity=0.438 Sum_probs=17.0
Q ss_pred EEEEecCCCCeEEEEeCCC
Q 027073 29 LGVVFDTDVDRSGVVDNKG 47 (228)
Q Consensus 29 lgia~D~DgDR~~vvd~~G 47 (228)
=|||+|++++|+.+-...+
T Consensus 207 NGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 207 NGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp EEEEEETTTTEEEEEETTC
T ss_pred EEEEEcCCCCEEEEECCCC
Confidence 6999999999999887776
No 37
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=26.08 E-value=92 Score=23.46 Aligned_cols=26 Identities=15% Similarity=0.058 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHHhcCCcEEEEecCCC
Q 027073 12 KTAMALTRAAVLENNADLGVVFDTDV 37 (228)
Q Consensus 12 ~~~l~~l~~~v~~~~adlgia~D~Dg 37 (228)
|..-..+.+.|.+..+|+||.+.|-|
T Consensus 44 pd~a~~va~~V~~g~~d~GIliCGTG 69 (149)
T 2vvr_A 44 PHYASQVALAVAGGEVDGGILICGTG 69 (149)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred HHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 55556677777777778777766543
No 38
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=25.79 E-value=65 Score=22.91 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCC-----------------eEEEEeCCCccc
Q 027073 14 AMALTRAAVLENNADLGVVFDTDVD-----------------RSGVVDNKGNPI 50 (228)
Q Consensus 14 ~l~~l~~~v~~~~adlgia~D~DgD-----------------R~~vvd~~G~~l 50 (228)
..+.+.+.+.+.+.++-+..|.+++ ...++|.+|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~ 134 (160)
T 3lor_A 81 TPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIR 134 (160)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEE
T ss_pred CHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEE
Confidence 4555667777777777777888776 256667777543
No 39
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=24.86 E-value=38 Score=27.67 Aligned_cols=22 Identities=0% Similarity=0.025 Sum_probs=16.5
Q ss_pred EEEEecCCCCeEEEE-eCCCccc
Q 027073 29 LGVVFDTDVDRSGVV-DNKGNPI 50 (228)
Q Consensus 29 lgia~D~DgDR~~vv-d~~G~~l 50 (228)
-|+++|||++++.++ |+.++++
T Consensus 30 SGla~~~~~~~L~aV~d~~~~I~ 52 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINKPAAIV 52 (255)
T ss_dssp EEEEEETTTTEEEEEEETTEEEE
T ss_pred ceeEEeCCCCEEEEEECCCCeEE
Confidence 589999999998886 4544433
No 40
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=24.79 E-value=1.3e+02 Score=20.90 Aligned_cols=38 Identities=16% Similarity=0.040 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhcCCcEE--EEecCCCCeEEEEeCCCccc
Q 027073 13 TAMALTRAAVLENNADLG--VVFDTDVDRSGVVDNKGNPI 50 (228)
Q Consensus 13 ~~l~~l~~~v~~~~adlg--ia~D~DgDR~~vvd~~G~~l 50 (228)
+.++.+.+.+++.++.+. ...-+.|..+.+.|++|+.+
T Consensus 107 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~i 146 (156)
T 3kol_A 107 QLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMI 146 (156)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEE
T ss_pred HHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEE
Confidence 478888888999888863 23334454455557777543
No 41
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=24.52 E-value=53 Score=28.54 Aligned_cols=48 Identities=19% Similarity=0.219 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHH
Q 027073 12 KTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60 (228)
Q Consensus 12 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~ 60 (228)
+.+.+.|.+++.+.+.+ .=.++|..+|++|+|-+|..+.+|---+++.
T Consensus 15 ~~~~~~l~~~I~~~~~~-s~~~~~~~~~~AVFD~DgTl~~~D~~e~~~~ 62 (385)
T 4gxt_A 15 ESIYLAINKLIAKHGKD-NEAYNPDNKPFAVFDWDNTSIIGDVEEALLY 62 (385)
T ss_dssp HHHHHHHHHHHHHHSTT-STTCCTTSEEEEEECCTTTTEESCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-CCCCCCCCCCEEEEcCCCCeecccccccHHH
Confidence 34556666666665433 2345899999999999999887664444444
No 42
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=24.32 E-value=42 Score=24.45 Aligned_cols=23 Identities=13% Similarity=0.169 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHhcC--Cc-EEEEecC
Q 027073 13 TAMALTRAAVLENN--AD-LGVVFDT 35 (228)
Q Consensus 13 ~~l~~l~~~v~~~~--ad-lgia~D~ 35 (228)
..+..+.+...+.+ .. ++|..|+
T Consensus 54 ~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 54 AHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred HHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 34555555444443 43 3344454
No 43
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=24.29 E-value=56 Score=25.04 Aligned_cols=31 Identities=6% Similarity=0.106 Sum_probs=26.3
Q ss_pred CCCCeEEEEeCCCccccchhHHHHHHHHHHh
Q 027073 35 TDVDRSGVVDNKGNPINGDKLIALMSAIVLK 65 (228)
Q Consensus 35 ~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~ 65 (228)
++++++.+.|++|+.++-.++...+..+...
T Consensus 72 ~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~ 102 (163)
T 4fak_A 72 KPQSTVITLEIQGKMLSSEGLAQELNQRMTQ 102 (163)
T ss_dssp CTTSEEEEEEEEEEECCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc
Confidence 5678888899999999999998888887655
No 44
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=24.11 E-value=1.5e+02 Score=20.44 Aligned_cols=39 Identities=15% Similarity=0.057 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHhcCCcEE--EEecCCCCe-EEEEeCCCccc
Q 027073 12 KTAMALTRAAVLENNADLG--VVFDTDVDR-SGVVDNKGNPI 50 (228)
Q Consensus 12 ~~~l~~l~~~v~~~~adlg--ia~D~DgDR-~~vvd~~G~~l 50 (228)
.+.++.+.+.+++.++.+. ...-+.|.| +.+.|++|+.+
T Consensus 82 ~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~i 123 (138)
T 2a4x_A 82 TASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 123 (138)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEE
T ss_pred HHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEE
Confidence 3478888888888887753 333345555 44458888544
No 45
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=24.05 E-value=93 Score=21.95 Aligned_cols=32 Identities=16% Similarity=-0.060 Sum_probs=22.5
Q ss_pred hHHHHHHHH-HHhcCCcEEEEecCCCCeEEEEe
Q 027073 13 TAMALTRAA-VLENNADLGVVFDTDVDRSGVVD 44 (228)
Q Consensus 13 ~~l~~l~~~-v~~~~adlgia~D~DgDR~~vvd 44 (228)
..++.+.+. ....++++...+|.||-|+.--+
T Consensus 35 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~~a~~~ 67 (131)
T 1p0z_A 35 ARIKALIDPMRSFSDATYITVGDASGQRLYHVN 67 (131)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEEETTSBEEECSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCCcEEEecC
Confidence 345554444 44679999999999998876443
No 46
>2pa8_L DNA-directed RNA polymerase subunit L; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_L 3hkz_L 2waq_L 2wb1_L 2y0s_L
Probab=23.81 E-value=44 Score=22.96 Aligned_cols=16 Identities=25% Similarity=0.272 Sum_probs=14.0
Q ss_pred cCCCCCCceeEEEeec
Q 027073 212 NSHSANETICLIIQTF 227 (228)
Q Consensus 212 ~~~ps~~ep~~~~~~~ 227 (228)
..+|+-++|.|||||-
T Consensus 45 vpHPl~~~~~lrIqT~ 60 (92)
T 2pa8_L 45 QPHPLSDKIIVKILTD 60 (92)
T ss_dssp CSSTTSCCEEEEEEEC
T ss_pred cCCCCCCceEEEEEEC
Confidence 3499999999999995
No 47
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=22.89 E-value=55 Score=26.91 Aligned_cols=19 Identities=21% Similarity=0.212 Sum_probs=16.5
Q ss_pred EEEEecCCCCeEEEEeCCC
Q 027073 29 LGVVFDTDVDRSGVVDNKG 47 (228)
Q Consensus 29 lgia~D~DgDR~~vvd~~G 47 (228)
-|||+|+|++|+.+....+
T Consensus 209 nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 209 NGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp EEEEEETTTTEEEEEETTC
T ss_pred EEEEEcCCCCEEEEECCCC
Confidence 6999999999999887655
No 48
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=22.85 E-value=63 Score=23.99 Aligned_cols=15 Identities=7% Similarity=0.107 Sum_probs=7.1
Q ss_pred HHHHHHhcCCcEEEE
Q 027073 18 TRAAVLENNADLGVV 32 (228)
Q Consensus 18 l~~~v~~~~adlgia 32 (228)
+.+.+++.+.++-+.
T Consensus 102 ~~~~~~~~~~~~p~~ 116 (183)
T 2obi_A 102 IKEFAAGYNVKFDMF 116 (183)
T ss_dssp HHHHHHTTTCCSEEB
T ss_pred HHHHHHHcCCCceEE
Confidence 344445555554444
No 49
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=22.81 E-value=1.1e+02 Score=23.12 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHhcCCcEEEEecCCC
Q 027073 12 KTAMALTRAAVLENNADLGVVFDTDV 37 (228)
Q Consensus 12 ~~~l~~l~~~v~~~~adlgia~D~Dg 37 (228)
|..-..+.+.|.+.++|+||.+.|-|
T Consensus 55 pd~a~~va~~V~~g~~d~GIliCGTG 80 (155)
T 1o1x_A 55 PDYAKKVVQSILSNEADFGILLCGTG 80 (155)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHHHHHcCCCceEEEEcCCc
Confidence 55566677788888888887776543
No 50
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=22.72 E-value=1e+02 Score=21.32 Aligned_cols=6 Identities=33% Similarity=0.578 Sum_probs=2.3
Q ss_pred EEeCCC
Q 027073 42 VVDNKG 47 (228)
Q Consensus 42 vvd~~G 47 (228)
++|.+|
T Consensus 117 lid~~G 122 (148)
T 3hcz_A 117 VLDKNK 122 (148)
T ss_dssp EECTTC
T ss_pred EECCCC
Confidence 334444
No 51
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=22.34 E-value=1.8e+02 Score=19.29 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHhcCCcEEE--EecCCCCe-EEEEeCCCccc
Q 027073 12 KTAMALTRAAVLENNADLGV--VFDTDVDR-SGVVDNKGNPI 50 (228)
Q Consensus 12 ~~~l~~l~~~v~~~~adlgi--a~D~DgDR-~~vvd~~G~~l 50 (228)
.+.++.+.+.+++.++.+.- ...++|.| +.+.|++|+.+
T Consensus 82 ~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~i 123 (127)
T 3e5d_A 82 KEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRI 123 (127)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred HHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEE
Confidence 34477888888888887643 34566766 55569999764
No 52
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=21.42 E-value=1.4e+02 Score=20.46 Aligned_cols=36 Identities=14% Similarity=0.018 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHhcCCcEEEEecCCCCeEEEEeCCCc
Q 027073 13 TAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGN 48 (228)
Q Consensus 13 ~~l~~l~~~v~~~~adlgia~D~DgDR~~vvd~~G~ 48 (228)
+.++.+.+.+++.++.+.-.....+..+.+.|++|+
T Consensus 72 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~ 107 (135)
T 1nki_A 72 ADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGH 107 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCC
T ss_pred HHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCC
Confidence 467888888888887764322222333555566663
No 53
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=20.99 E-value=66 Score=27.89 Aligned_cols=33 Identities=18% Similarity=0.035 Sum_probs=27.2
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcC---CcEEEEecC
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENN---ADLGVVFDT 35 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~---adlgia~D~ 35 (228)
|++..|||. .+.++.+.+.+++.+ +|+.|++=|
T Consensus 83 f~~v~~~pt-~~~v~~~~~~~~~~~~~~~D~IIavGG 118 (375)
T 3rf7_A 83 YVNVDDEPT-TVQVDELTAQVKAFNTKLPVSVVGLGG 118 (375)
T ss_dssp EECCSSCCB-HHHHHHHHHHHHHHCSSCCSEEEEEES
T ss_pred EeCCCCCCC-HHHHHHHHHHHHHhCCCCCCEEEEeCC
Confidence 566779996 788899999999988 999888743
No 54
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=20.90 E-value=1.3e+02 Score=23.51 Aligned_cols=26 Identities=4% Similarity=-0.004 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHhcCCcEEEEecCCC
Q 027073 12 KTAMALTRAAVLENNADLGVVFDTDV 37 (228)
Q Consensus 12 ~~~l~~l~~~v~~~~adlgia~D~Dg 37 (228)
|..-..+.+.|.+.++|+||.+.|-|
T Consensus 75 Pd~a~~vA~~V~~ge~d~GIliCGTG 100 (184)
T 3sgw_A 75 PHVAIQAAQLIKDGKVDRALMICGTG 100 (184)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 55566677788887777777766543
No 55
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=20.88 E-value=45 Score=28.84 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=26.0
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCcEEEEec
Q 027073 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (228)
Q Consensus 2 Fp~~~PnPe~~~~l~~l~~~v~~~~adlgia~D 34 (228)
|++..|||. .+.++.+.+.+++.++|+.|++=
T Consensus 65 ~~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 96 (383)
T 3ox4_A 65 YDGVMPNPT-VTAVLEGLKILKDNNSDFVISLG 96 (383)
T ss_dssp EEEECSSCB-HHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ECCccCCCC-HHHHHHHHHHHHhcCcCEEEEeC
Confidence 455679995 78899999999999999888764
No 56
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=20.30 E-value=3.4e+02 Score=21.79 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=41.4
Q ss_pred HHHHHhcCCcEEEEecCCCCeEEEEeCCCccccchhHHHHHHHHHHhhCCCCeEEEcccCCHHHHH---HHHHcCCeEEE
Q 027073 19 RAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTK---FITDRGGNHCL 95 (228)
Q Consensus 19 ~~~v~~~~adlgia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~ll~~~~~~~vv~~v~ss~~l~~---ia~~~g~~v~~ 95 (228)
.+++...+..+.-++|..++ +.+ ....|+++.+++..+.. .|.++|..++-
T Consensus 29 ~~~~~~~~~elv~~id~~~~--------------~~l------------~~~DVvIDFT~P~a~~~~~~~~~~~g~~~Vi 82 (228)
T 1vm6_A 29 QKVFSEKGHELVLKVDVNGV--------------EEL------------DSPDVVIDFSSPEALPKTVDLCKKYRAGLVL 82 (228)
T ss_dssp HHHHHHTTCEEEEEEETTEE--------------EEC------------SCCSEEEECSCGGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHhCCCCEEEEEEcCCCc--------------ccc------------cCCCEEEECCCHHHHHHHHHHHHHcCCCEEE
Confidence 34455667788888876542 111 13469999999988864 77889999999
Q ss_pred EecchHH
Q 027073 96 YRVGYRN 102 (228)
Q Consensus 96 t~vG~k~ 102 (228)
..|||..
T Consensus 83 GTTG~~~ 89 (228)
T 1vm6_A 83 GTTALKE 89 (228)
T ss_dssp CCCSCCH
T ss_pred eCCCCCH
Confidence 9999865
Done!