BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027076
(228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1JK9|B Chain B, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|D Chain D, Heterodimer Between H48f-Ysod1 And Yccs
Length = 249
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 2 VDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
+ M CE CV+ +K L+ V G+ ++ D+ Q++ + S T+ L G+ A + G
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG 72
Query: 62 QGVPEDFLVS-------AAVAEFKGPDVFGVVRLAQVNMELARIEANFSGL-SPGKHGWS 113
G P V+ + + K V G+ R+ QV + +G+ G + S
Sbjct: 73 AGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHAS 132
Query: 114 INEFGDLTKGAVSTGRVYNPKIEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIG 173
I+E GD++KG STG+V++ E DLG + G+ F S L LIG
Sbjct: 133 IHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYS--GKTFLSA---PLPTWQLIG 187
Query: 174 RSIVVYGTEDKSDSGVTAA-------VIARSAGVGENYKKICACDGTIIWE 217
RS V+ + + ++ ++ VIARSAGV EN K++CAC G +WE
Sbjct: 188 RSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWE 238
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 74/151 (49%), Gaps = 20/151 (13%)
Query: 70 VSAAVAEFKGPD-VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTG 128
+ AAVA GP V GVVR Q+ E IE GL PG HG ++++GDLT S G
Sbjct: 3 LGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCG 62
Query: 129 RVYNPK--IEGSAKEP---LGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGTED 183
+NP G ++ GDLG V AD G A F E L+V D+IGRS+++ ED
Sbjct: 63 NHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVIGRSLIIDEGED 122
Query: 184 KSDSG--------------VTAAVIARSAGV 200
G + +IARSAG+
Sbjct: 123 DLGRGGHPLSKITGNSGERLACGIIARSAGL 153
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 82 VFGVVRLAQ-VNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP-KIEGSA 139
V GVV+ Q + + A FSGL GKHG+ ++EFGD T G S G +NP K E A
Sbjct: 16 VKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGA 75
Query: 140 KE----PLGDLGTVVADEKGEAFFSGVKEMLRV---ADLIGRSIVVYGTED 183
E +GDLG VVA G A ++ +++ + +IGRS+V++ ED
Sbjct: 76 PEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENED 126
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 73 AVAEFKG-PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AVA KG +V GVV L Q + + SGL+PGKHG+ ++EFGD T G +STG +
Sbjct: 5 AVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHF 64
Query: 132 NP--KIEGSAKEPL---GDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
NP K G+ ++ + GDLG +VA+ G A + V + + ++GR++VV+ ED
Sbjct: 65 NPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELED 124
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 82 VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEG-- 137
V GVV Q + ++ A F GL PGKHG+ ++EFGD T+G S G +NP K G
Sbjct: 13 VKGVVHFTQAG-DAVKVHAEFEGLKPGKHGFHVHEFGDTTQGCTSAGAHFNPHGKNHGAP 71
Query: 138 -SAKEPLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+A+ +GDLG V A G+A +M+ + +IGRS+V++
Sbjct: 72 DAAERHVGDLGNVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIH 117
>pdb|1QUP|A Chain A, Crystal Structure Of The Copper Chaperone For Superoxide
Dismutase
pdb|1QUP|B Chain B, Crystal Structure Of The Copper Chaperone For Superoxide
Dismutase
Length = 222
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 2 VDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
+ CE CV+ +K L+ V G+ ++ D+ Q+ + S T+ L G+ A + G
Sbjct: 12 IPXHCENCVNDIKACLKNVPGINSLNFDIEQQIXSVESSVAPSTIINTLRNCGKDAIIRG 71
Query: 62 QGVPEDFLVS-------AAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLS-PGKHGWS 113
G P V+ + + K V G+ R+ QV + +G+ G + S
Sbjct: 72 AGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHAS 131
Query: 114 INEFGDLTKGAVSTGRVYNPKIEGSAKEPL-----GDLGTVVADEKGEAFFSGVKEMLRV 168
I+E GD++KG STG+V++ EP+ DLG + G+ F S L
Sbjct: 132 IHEKGDVSKGVESTGKVWH-----KFDEPIECFNESDLGKNLY--SGKTFLSA---PLPT 181
Query: 169 ADLIGRSIVVYGTEDKSDSGVTA-------AVIARSAGVGE 202
LIGRS V+ + + ++ ++ VIARSAGV E
Sbjct: 182 WQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE 222
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 73 AVAEFKG-PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AVA KG +V GVV L+Q + + +GL+PG HG+ ++E+GD T G +STG +
Sbjct: 5 AVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHF 64
Query: 132 NPK--IEGSAKEPL---GDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
NP G+ + + GDLG +VA+ G A + V + + ++GR++VV+ ED
Sbjct: 65 NPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELED 124
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 73 AVAEFKGPD-VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV KG V G + L + ++ + +GL+PGKHG+ ++EFGD T G S G +
Sbjct: 4 AVCVLKGDSPVTGTIHLKE-EGDMVTVTGEITGLTPGKHGFHVHEFGDNTNGCTSAGGHF 62
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
NP K G+ ++ GDLG VVA E G+A + +++++ +IGR++VV+ ED
Sbjct: 63 NPHGKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHVDED 122
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 82 VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSA 139
V G + Q + N SGL PG HG+ ++ GD T G +STG +NP K GS
Sbjct: 14 VAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGSP 73
Query: 140 KEPL---GDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTEDKSDSGVTAAV 193
++ GDLG + + G A F+ V + + + +IGR++VV+ D D G
Sbjct: 74 EDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVH--ADPDDLGKGGHE 131
Query: 194 IARSAG 199
+++S G
Sbjct: 132 LSKSTG 137
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 71 SAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRV 130
S A+A + G + QV ++ +GL PG++G+ ++E GDL+ G +STG
Sbjct: 9 SRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 68
Query: 131 YNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVV---- 178
+NP K G + +GDLG VV DE + V + + ++ +IGR++V+
Sbjct: 69 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 128
Query: 179 --YGTEDKSDSGVTAAVIARSA 198
YG D DS T R A
Sbjct: 129 DDYGKSDHPDSRKTGNAGGRVA 150
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 73 AVAEFKGPDVFGVVRLAQVN-MELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AVA +G V G + + Q + + A IE GL+PG HG+ ++++GD T G +S G +
Sbjct: 4 AVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHF 63
Query: 132 NP--KIEGSAKEPL---GDLGTVVADEKGEAFFSGVKEMLRV---ADLIGRSIVVYGTED 183
NP K G K + GDLG V A G A ++ + ++GRS+VV+ +D
Sbjct: 64 NPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQD 123
Query: 184 KSDSGV 189
GV
Sbjct: 124 DLGEGV 129
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 71 SAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRV 130
S A+A + G + QV ++ +GL PG++G+ ++E GDL+ G +STG
Sbjct: 8 SRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 67
Query: 131 YNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVV---- 178
+NP K G + +GDLG VV DE + V + + ++ +IGR++V+
Sbjct: 68 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 127
Query: 179 --YGTEDKSDSGVTAAVIARSA 198
YG D DS T R A
Sbjct: 128 DDYGKSDHPDSRKTGNAGGRVA 149
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 30 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVGDLGNVTAD 89
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+ G A V ++ ++ +IGR++VV+
Sbjct: 90 KNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 30 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAD 89
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+ G A V ++ ++ +IGR++VV+
Sbjct: 90 KNGVAIVDIVDPLISLSGEXSIIGRTMVVH 119
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 29 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVGDLGNVTAD 88
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+ G A V ++ ++ +IGR++VV+
Sbjct: 89 KNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 29 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVGDLGNVTAD 88
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+ G A V ++ ++ +IGR++VV+
Sbjct: 89 KNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 30 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAD 89
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
+ G A V ++ ++ +IGR++VV+ D
Sbjct: 90 KNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPD 123
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 29 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAD 88
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
+ G A V ++ ++ +IGR++VV+ D
Sbjct: 89 KNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPD 122
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 71 SAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRV 130
+ AV + GP V G + + + + + +GL+ G HG+ +++FGD T+G S G
Sbjct: 5 AVAVLKGDGP-VQGTIHF-EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 62
Query: 131 YNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+NP K G K+ +GDLG V AD+ G A V ++ ++ +IGR++VV+
Sbjct: 63 FNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 29 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAD 88
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G A V ++ ++ +IGR++VV+
Sbjct: 89 SNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G K+ +GDLG V AD
Sbjct: 30 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAD 89
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G A V ++ ++ +IGR++VV+
Sbjct: 90 SNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I+EFGD T G VS G
Sbjct: 4 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVSAGP 63
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+G V DE G A F + +++ ++GRS+V++
Sbjct: 64 HFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 123
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 124 QDDLGKGDT 132
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I+EFGD T G VS G
Sbjct: 4 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGP 63
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+G V DE G A F + +++ ++GRS+V++
Sbjct: 64 HFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 123
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 124 QDDLGKGDT 132
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I+EFGD T G VS G
Sbjct: 3 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGP 62
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+G V DE G A F + +++ ++GRS+V++
Sbjct: 63 HFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 122
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 123 QDDLGKGDT 131
>pdb|2CRL|A Chain A, The Apo Form Of Hma Domain Of Copper Chaperone For
Superoxide Dismutase
Length = 98
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 2 VDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
V M C+ CVDAV++ LQ V GV++VEV L +Q+V + + P + + LE TGR+A L G
Sbjct: 25 VQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKG 84
Query: 62 QG 63
G
Sbjct: 85 MG 86
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIE---- 136
DV GVV Q + +E GL+ G HG+ I+ FGD T G +S G +NP+ +
Sbjct: 12 DVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGA 71
Query: 137 -GSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G +GDLG V A E G A F ++ + +IGR+ VV+
Sbjct: 72 PGDTDRHVGDLGNVTA-EGGVAQFKITDSLISLKGPNSIIGRTAVVH 117
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I EFGD T G VS G
Sbjct: 4 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVSAGP 63
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+G V DE G A F + +++ ++GRS+V++
Sbjct: 64 HFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 123
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 124 QDDLGKGDT 132
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP---KIEGSAKE--PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G + E +GDLG V AD
Sbjct: 29 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPSDEERHVGDLGNVTAD 88
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G A V ++ ++ +IGR++VV+
Sbjct: 89 SNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 98 IEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVAD 152
+ + +GL+ G HG+ +++FGD T+G S G +NP K G + +GDLG V AD
Sbjct: 29 VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPSDDERHVGDLGNVTAD 88
Query: 153 EKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
+ G A V ++ ++ +IGR++VV+
Sbjct: 89 KNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQ-VNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP---K 134
GP V G + Q + E + +GL+ G+HG+ ++++GD T+G S G +NP K
Sbjct: 12 GP-VQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKK 70
Query: 135 IEGSAKE--PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G A E +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPADEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I EFGD T G VS G
Sbjct: 3 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVSAGP 62
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+G V DE G A F + +++ ++GRS+V++
Sbjct: 63 HFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 122
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 123 QDDLGKGDT 131
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I EFGD T G VS G
Sbjct: 3 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVSAGP 62
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+G V DE G A F + +++ ++GRS+V++
Sbjct: 63 HFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 122
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 123 QDDLGKGDT 131
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++EFGD T GA S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 69 LVSAAVAEFKGP-DVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVS 126
+ + AVA KG V G++ Q ++ + GL+ G HG+ ++EFGD T G S
Sbjct: 1 MATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 127 TGRVYNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVV 178
G +NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 120
Query: 179 Y 179
+
Sbjct: 121 H 121
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 79 GPDVFGVVRLAQ-VNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP---K 134
GP V G + Q + E + +GL+ G+HG+ ++++GD T+G S G +NP K
Sbjct: 12 GP-VQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKK 70
Query: 135 IEGSAKE--PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
G A E +GDLG V A + G A S ++ ++ +IGR++VV+ +D
Sbjct: 71 HGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQD 124
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 19/141 (13%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY---- 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKAD 124
Query: 180 -----GTEDKSDSGVTAAVIA 195
G E+ +++G + +A
Sbjct: 125 DLGKGGNEESTETGNAGSRLA 145
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 73 AVAEFKG-PDVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGR 129
AVA KG V GVV+ Q + E + +G SP + G+ I+EFGD T G VS G
Sbjct: 4 AVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGP 63
Query: 130 VYNP--KIEGSAKE---PLGDLGTVVADEKGEA---FFSGVKEMLRVADLIGRSIVVYGT 181
+NP K G+ + +GD+ V DE G A F + +++ ++GRS+V++
Sbjct: 64 HFNPFKKTHGAPTDEVRHVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAG 123
Query: 182 EDKSDSGVT 190
+D G T
Sbjct: 124 QDDLGKGDT 132
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +
Sbjct: 7 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 65
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 66 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 121
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +
Sbjct: 7 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 65
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 66 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 121
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 69 LVSAAVAEFKGP-DVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVS 126
+ + AV KG V G++ Q ++ + GL+ G HG+ ++EFGD T G S
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 127 TGRVYNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVV 178
G +NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 179 Y 179
+
Sbjct: 121 H 121
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 97 RIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVA 151
++ + GL+ G HG+ ++EFGD T G S G +NP + G K+ +GDLG V A
Sbjct: 30 KVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTA 89
Query: 152 DEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
D+ G A S ++ ++ +IGR++VV+
Sbjct: 90 DKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTEDK 184
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+ D
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADH 125
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKEP---LGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKEP---LGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 121
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 69 LVSAAVAEFKGP-DVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVS 126
+ + AVA KG V G++ Q ++ + GL+ G HG+ ++EFGD T G S
Sbjct: 1 MATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 127 TGRVYNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVV 178
G +NP + G K+ +G LG V AD+ G A S ++ ++ +IGR++VV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 120
Query: 179 Y 179
+
Sbjct: 121 H 121
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ + GR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSTEDSVISLSGDHCITGRTLVVH 120
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ + EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ + EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 69 LVSAAVAEFKGPDVFGVVRLAQVNMELARI-EANFSGLSPGKHGWSINEFGDLTKGAVST 127
+ + AV +G DV G V Q + + + GL+ GKHG+ ++EFGD T G S
Sbjct: 1 MPAKAVCVLRG-DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
Query: 128 GRVYNPKIE-----GSAKEPLGDLGTVVADEKGEAFFSGVKE----MLRVADLIGRSIVV 178
G +NP+ + SA +GDLG + A E +++ + +IGR++VV
Sbjct: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVV 119
Query: 179 YGTEDKSDSGVTAAVIARSAG 199
+ D D G+ ++++ G
Sbjct: 120 H--ADPDDLGLGGHELSKTTG 138
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + G++ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 65 PEDFLVSAAVAEFKGP-DVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTK 122
P + + AV KG V G++ Q ++ + GL+ G HG+ ++EFGD T
Sbjct: 2 PLGSMATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTA 61
Query: 123 GAVSTGRVYNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGR 174
G S G +NP + G K+ +GDLG V AD+ A S ++ ++ +IGR
Sbjct: 62 GCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGR 121
Query: 175 SIVVY 179
++VV+
Sbjct: 122 TLVVH 126
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + G++ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 97 RIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVA 151
++ + GL+ G HG+ ++EFGD T G S G +NP + G K+ +GDLG V A
Sbjct: 30 KVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTA 89
Query: 152 DEKGEAFFSGVKEMLRVA---DLIGRSIVVYGTED 183
+ G A S ++ ++ +IGR++VV+ +D
Sbjct: 90 GKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQD 124
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 69 LVSAAVAEFKGPDVFGVVRLAQVNMELARI-EANFSGLSPGKHGWSINEFGDLTKGAVST 127
+ + AV +G DV G V Q + + + GL+ GKHG+ ++EFGD T G S
Sbjct: 1 MPAKAVCVLRG-DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
Query: 128 GRVYNPKIE-----GSAKEPLGDLGTVVADEKGEAFFSGVKE----MLRVADLIGRSIVV 178
G +NP+ + SA +GDLG + A E +++ + +IGR++VV
Sbjct: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVV 119
Query: 179 YGTEDKSDSGVTAAVIARSAG 199
+ D D G+ ++++ G
Sbjct: 120 H--ADPDDLGLGGNELSKTTG 138
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ + GR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVH 120
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G G+ ++EFGD T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVH 121
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 65 PEDFLVSAAVAEFKGP-DVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTK 122
P + + AV KG V G++ Q ++ + GL+ G HG+ ++EFGD T
Sbjct: 2 PLGSMATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTA 61
Query: 123 GAVSTGRVYNP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGR 174
G S G +NP + G K+ +GDL V AD+ G A S ++ ++ +IGR
Sbjct: 62 GCTSAGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGR 121
Query: 175 SIVVY 179
++VV+
Sbjct: 122 TLVVH 126
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDLG V AD+ A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHXIIGRTLVVH 121
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 105 LSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSAKE---PLGDLGTVVADEKGEAFF 159
L+ G HG+ ++EFGD T G S G +NP + G K+ +GDLG V AD+ G A
Sbjct: 38 LTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADV 97
Query: 160 SGVKEMLRVAD---LIGRSIVVY 179
S ++ ++ +IGR++VV+
Sbjct: 98 SIEDSVISLSGDHCIIGRTLVVH 120
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDL V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
G K+ +GDL V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 13 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDL V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 72 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 121
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 79 GPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KI 135
GP V G++ Q ++ + GL+ G HG+ ++EFGD T G S G +NP +
Sbjct: 12 GP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 136 EGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
G K+ +GDL V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 71 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVA---DLIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+S++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVV 178
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVV 119
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G HG+ ++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPSF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
NP + G K+ +G LG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKSGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 113 SINEFGDLTKGAVSTGRVYNPKIEGSAKEPLGDLGT-VVADEKGEAFFSGVKEMLR-VAD 170
+++FGDL++G STG YNP + P GD G V D + +G+ L
Sbjct: 96 HVHQFGDLSQGCESTGPHYNPLAVPHPQHP-GDFGNFAVRDGSLWRYRAGLAASLAGPHS 154
Query: 171 LIGRSIVVYGTEDKSDSGVTAAVIARSAGVGENYKKICAC----DGTIIWESSSNDFVAS 226
++GR++VV+ ED G A + G +++ C G +WE + +
Sbjct: 155 IVGRAVVVHAGEDDLGRGGNQASVEN----GNAGRRLACCVVGVCGPGLWERQAREHSER 210
Query: 227 K 227
K
Sbjct: 211 K 211
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 73 AVAEFKGPD-VFGVVRLAQ--------VNMELARIEANFSGLSPGKHGWSINEFGDLTKG 123
A+A KG V GV+ Q V+ E+ ++AN + G+ +++FGD + G
Sbjct: 7 AIAVLKGDSPVQGVITFTQESSGGPVTVSGEIKNMDAN------AQRGFHVHQFGDNSNG 60
Query: 124 AVSTGRVYNPKIEGSAKEP-----LGDLGTVVADEKGEAFFSGVKEMLRV---ADLIGRS 175
S G +NP +GDLG V D G A L + +IGR+
Sbjct: 61 CTSAGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRT 120
Query: 176 IVVYGTED 183
IV++ ED
Sbjct: 121 IVIHAGED 128
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 73 AVAEFKGPDVFGVVRLAQVNME-LARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 131
AV + GP V G++ Q ++ + GL+ G G+ ++E D T G S G +
Sbjct: 6 AVLKGDGP-VQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSAGPHF 64
Query: 132 NP--KIEGSAKE---PLGDLGTVVADEKGEAFFSGVKEMLRVAD---LIGRSIVVY 179
NP + G K+ +GDLG V AD+ G A S ++ ++ +IGR++VV+
Sbjct: 65 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
>pdb|3CJK|A Chain A, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1
Length = 68
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 VDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
VDM C GC +AV + L + GVK ++DL N+ V I + T+ L++TG+ +G
Sbjct: 7 VDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG 65
>pdb|1FE4|A Chain A, Crystal Structure Of Mercury-Hah1
pdb|1FE4|B Chain B, Crystal Structure Of Mercury-Hah1
pdb|1FEE|A Chain A, Crystal Structure Of Copper-Hah1
pdb|1FEE|B Chain B, Crystal Structure Of Copper-Hah1
pdb|1FE0|A Chain A, Crystal Structure Of Cadmium-Hah1
pdb|1FE0|B Chain B, Crystal Structure Of Cadmium-Hah1
pdb|1TL4|A Chain A, Solution Structure Of Cu(i) Hah1
pdb|1TL5|A Chain A, Solution Structure Of Apohah1
pdb|2K1R|B Chain B, The Solution Nmr Structure Of The Complex Between Mnk1
And Hah1 Mediated By Cu(I)
pdb|3IWL|A Chain A, Crystal Structure Of Cisplatin Bound To A Human Copper
Chaperone (Monomer)
pdb|3IWX|A Chain A, Crystal Structure Of Cisplatin Bound To A Human Copper
Chaperone (Dimer)
pdb|3IWX|B Chain B, Crystal Structure Of Cisplatin Bound To A Human Copper
Chaperone (Dimer)
Length = 68
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 VDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
VDM C GC +AV + L + GVK ++DL N+ V I + T+ L++TG+ +G
Sbjct: 8 VDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG 66
>pdb|2ROE|A Chain A, Solution Structure Of Thermus Thermophilus Hb8 Ttha1718
Protein In Vitro
pdb|2ROG|A Chain A, Solution Structure Of Thermus Thermophilus Hb8 Ttha1718
Protein In Living E. Coli Cells
Length = 66
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
M C CV AV + L+ V GV+ VEV L + G++ K + +A+E+ G KA ++
Sbjct: 9 MTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVLA 66
>pdb|2GCF|A Chain A, Solution Structure Of The N-Terminal Domain Of The
Coppper(I) Atpase Pacs In Its Apo Form
Length = 73
Score = 37.7 bits (86), Expect = 0.006, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVD--LSNQVVRILGSSPLKTMTEALEQTGRKARLVG 61
M+C C ++++ + V GV++ +V+ L VV G + + +T+A+E+ G AR++
Sbjct: 12 MRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVLK 71
Query: 62 Q 62
Q
Sbjct: 72 Q 72
>pdb|2XMW|A Chain A, Pacs, N-Terminal Domain, From Synechocystis Pcc6803
Length = 71
Score = 35.8 bits (81), Expect = 0.018, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVD--LSNQVVRILGSSPLKTMTEALEQTGRKARLV 60
M+C C ++++ + V GV++ +V+ L VV G + + +T+A+E+ G AR++
Sbjct: 12 MRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70
>pdb|1EJ8|A Chain A, Crystal Structure Of Domain 2 Of The Yeast Copper
Chaperone For Superoxide Dismutase (Lys7) At 1.55 A
Resolution
Length = 140
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 82 VFGVVRLAQVNMELARIEANFSGLS-PGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSAK 140
V G+ R+ QV + +G+ G + SI+E GD++KG STG+V++
Sbjct: 23 VRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-----KFD 77
Query: 141 EPL-----GDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVV 178
EP+ DLG + G+ F S L LIGRS V+
Sbjct: 78 EPIECFNESDLGKNLYS--GKTFLSA---PLPTWQLIGRSFVI 115
>pdb|4A48|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A48|B Chain B, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A4J|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
Length = 69
Score = 34.7 bits (78), Expect = 0.047, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVD--LSNQVVRILGSSPLKTMTEALEQTGRKARLV 60
M C C ++++ + V GV++ +V+ L VV G + + +T+A+E+ G AR++
Sbjct: 11 MDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69
>pdb|1KVI|A Chain A, Solution Structure Of The Reduced Form Of The First
Heavy Metal Binding Motif Of The Menkes Protein
pdb|1KVJ|A Chain A, Solution Structure Of The Cu(I) Bound Form Of The First
Heavy Metal Binding Motif Of The Menkes Protein
Length = 79
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPL---KTMTEALEQTGRKA 57
M C CV ++Q++ V GV +++V L + I+ L KT+ EA++ G A
Sbjct: 17 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 73
>pdb|2K1R|A Chain A, The Solution Nmr Structure Of The Complex Between Mnk1
And Hah1 Mediated By Cu(I)
Length = 73
Score = 32.3 bits (72), Expect = 0.24, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPL---KTMTEALEQTGRKA 57
M C CV ++Q++ V GV +++V L + I+ L KT+ EA++ G A
Sbjct: 13 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 69
>pdb|3CJK|B Chain B, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1
Length = 75
Score = 32.3 bits (72), Expect = 0.24, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPL---KTMTEALEQTGRKA 57
M C CV ++Q++ V GV +++V L + I+ L KT+ EA++ G A
Sbjct: 11 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 67
>pdb|3G03|A Chain A, Structure Of Human Mdm2 In Complex With High Affinity
Peptide
pdb|3G03|C Chain C, Structure Of Human Mdm2 In Complex With High Affinity
Peptide
Length = 109
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL V + FS VKE ++ +I R++VV
Sbjct: 45 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPS-------FS-VKEHRKIYTMIYRNLVVVNQ 96
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 97 QESSDSGTSVS 107
>pdb|2LZG|A Chain A, Nmr Structure Of Mdm2 (6-125) With Pip-1
Length = 125
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL G FS VKE ++ +I R++VV
Sbjct: 61 IMTKRLYDEKQQHIVYCSNDLLGDLF-------GVPSFS-VKEHRKIYTMIYRNLVVVNQ 112
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 113 QESSDSGTSVS 123
>pdb|3TU1|A Chain A, Exhaustive Fluorine Scanning Towards Potent P53-Mdm2
Antagonist
Length = 108
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL V + FS VKE ++ +I R++VV
Sbjct: 44 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPS-------FS-VKEHRKIYTMIYRNLVVVNQ 95
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 96 QESSDSGTSVS 106
>pdb|2AXI|A Chain A, Hdm2 In Complex With A Beta-hairpin
Length = 115
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL V + FS VKE ++ +I R++VV
Sbjct: 45 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPS-------FS-VKEHRKIYTMIYRNLVVVNQ 96
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 97 QESSDSGTSVS 107
>pdb|1YCR|A Chain A, Mdm2 Bound To The Transactivation Domain Of P53
Length = 109
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL V + FS VKE ++ +I R++VV
Sbjct: 45 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPS-------FS-VKEHRKIYTMIYRNLVVVNQ 96
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 97 QESSDSGTSVS 107
>pdb|1T4F|M Chain M, Structure Of Human Mdm2 In Complex With An Optimized P53
Peptide
pdb|2GV2|A Chain A, Mdm2 In Complex With An 8-Mer P53 Peptide Analogue
pdb|3JZR|A Chain A, Human Mdm2 Liganded With A 12mer Peptide Inhibitor (Pdi6w)
Length = 110
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL V + FS VKE ++ +I R++VV
Sbjct: 46 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPS-------FS-VKEHRKIYTMIYRNLVVVNQ 97
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 98 QESSDSGTSVS 108
>pdb|2XMV|A Chain A, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|B Chain B, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|C Chain C, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|D Chain D, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|E Chain E, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|F Chain F, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMM|A Chain A, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: H61y Atx1 Side-To-Side
pdb|2XMM|B Chain B, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: H61y Atx1 Side-To-Side
Length = 64
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRI---LGSSPLKT 45
+ CE C +AV + +Q V+VDL+++ V I LG L+T
Sbjct: 10 IACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRT 54
>pdb|4A46|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A46|B Chain B, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A46|C Chain C, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A46|D Chain D, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
Length = 63
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRI---LGSSPLKT 45
+ CE C +AV + +Q V+VDL+++ V I LG L+T
Sbjct: 9 IACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRT 53
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 84 GVVRLAQVNMELARIEANFSGLSPGKHGWSINEF---------GDLTKGAVSTGRVYNPK 134
G V + + N L + GLS G HG+ I+E G+LT G + G ++PK
Sbjct: 29 GTVTITESNYGLV-FTPDLQGLSEGLHGFHIHENPSCEPKEEEGELTAG-LGAGGHWDPK 86
Query: 135 IEGSAKEP------LGDLGTVVADEKGEAFFSGVKEMLR-VADLIGRSIVVY-GTEDKSD 186
P LGDL + G A + L+ + D+ G SI+++ G ++ SD
Sbjct: 87 GAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNHSD 146
Query: 187 S 187
Sbjct: 147 H 147
>pdb|2KT2|A Chain A, Structure Of Nmera, The N-Terminal Hma Domain Of Tn501
Mercuric Reductase
pdb|2KT3|A Chain A, Structure Of Hg-Nmera, Hg(Ii) Complex Of The N-Terminal
Domain Of Tn501 Mercuric Reductase
Length = 69
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDL---SNQVVRILGSSPLKTMTEALEQTGRKARL 59
M C+ C VK+ L+ V GV++ V + Q+ + G+SP +T A+ G KA L
Sbjct: 9 MTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSP-DALTAAVAGLGYKATL 66
>pdb|1SB6|A Chain A, Solution Structure Of A Cyanobacterial Copper
Metallochaperone, Scatx1
pdb|2XMT|A Chain A, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1
Form)
pdb|2XMT|B Chain B, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1
Form)
pdb|2XMU|A Chain A, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu2
Form)
pdb|2XMU|B Chain B, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu2
Form)
pdb|2XMJ|A Chain A, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites:atx1 Side-To-Side (Aerobic)
pdb|2XMJ|B Chain B, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites:atx1 Side-To-Side (Aerobic)
pdb|2XMK|A Chain A, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: Atx1 Side-To-Side (Anaerobic)
pdb|2XMK|B Chain B, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: Atx1 Side-To-Side (Anaerobic)
Length = 64
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRI---LGSSPLKT 45
+ CE C +AV + +Q V+VDL+++ V I LG L+T
Sbjct: 10 IACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRT 54
>pdb|4HBM|A Chain A, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|B Chain B, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|C Chain C, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|D Chain D, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|E Chain E, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|F Chain F, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|G Chain G, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
pdb|4HBM|H Chain H, Ordering Of The N Terminus Of Human Mdm2 By Small Molecule
Inhibitors
Length = 120
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 125 VSTGRVYNPK---IEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGT 181
+ T R+Y+ K I + + LGDL G FS VKE ++ +I R++VV
Sbjct: 56 IMTKRLYDEKQQHIVYCSNDLLGDLF-------GVPSFS-VKEHRKIYTMIYRNLVVVNQ 107
Query: 182 EDKSDSGVTAA 192
++ SDSG + +
Sbjct: 108 QESSDSGTSVS 118
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 97 RIEANFSGLSPGKHGWSINEFGDLTKG--------AVSTGRVYNPKIEGSAKEP-----L 143
+ N L+PG HG+ ++E G A++ G Y+P P +
Sbjct: 32 HFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHM 91
Query: 144 GDLGTVVADEKGEAFFSGVKEML-RVADLIGRSIVVY-GTEDKSD 186
GDL + A+ G+ + V L ++A++ RS++V+ G ++ SD
Sbjct: 92 GDLPRLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSD 136
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 19/121 (15%)
Query: 84 GVVRLAQVNMELARIEANFSGLSPGKHGWSINEF---------GDLTKGAVSTGRVYNPK 134
G V + + N L + GLS G HG+ I+E G LT G + G ++PK
Sbjct: 29 GTVTITESNYGLV-FTPDLQGLSEGLHGFHIHENPSCEPKEQEGQLTAG-LGAGGHWDPK 86
Query: 135 IEGSAKEP------LGDLGTVVADEKGEAFFSGVKEMLR-VADLIGRSIVVY-GTEDKSD 186
P LGDL + G A + L+ + D+ G SI+++ G ++ SD
Sbjct: 87 GAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNHSD 146
Query: 187 S 187
Sbjct: 147 H 147
>pdb|1S6O|A Chain A, Solution Structure And Backbone Dynamics Of The Apo-Form
Of The Second Metal-Binding Domain Of The Menkes
Protein Atp7a
pdb|1S6U|A Chain A, Solution Structure And Backbone Dynamics Of The Cu(I)
Form Of The Second Metal-Binding Domain Of The Menkes
Protein Atp7a
Length = 76
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQ 52
M C C ++ K+ + GV+ ++V L NQ I+ L ++ E +Q
Sbjct: 12 MTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQ 60
>pdb|1Q8L|A Chain A, Second Metal Binding Domain Of The Menkes Atpase
Length = 84
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQ 52
M C C ++ K+ + GV+ ++V L NQ I+ L ++ E +Q
Sbjct: 18 MTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQ 66
>pdb|4A47|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A47|B Chain B, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A47|C Chain C, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A47|D Chain D, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
Length = 63
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRI---LGSSPLKT 45
M C C +AV + +Q V+VDL+++ V I LG L+T
Sbjct: 9 MDCTSCAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRT 53
>pdb|2ROP|A Chain A, Solution Structure Of Domains 3 And 4 Of Human Atp7b
Length = 202
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRI 37
M C+ CV +++ + + GV++++V L N+ ++
Sbjct: 29 MHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQV 62
>pdb|3LN6|A Chain A, Crystal Structure Of A Bifunctional Glutathione Synthetase
From Streptococcus Agalactiae
Length = 750
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 129 RVYNPKIEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSI 176
R Y+P I+ EP +L T +A + EA ++ + ++D+ GRSI
Sbjct: 49 RNYHPYIQTDYSEPQLELITPIAKDSQEA----IRFLKAISDVAGRSI 92
>pdb|3E2V|A Chain A, Crystal Structure Of An Uncharacterized Amidohydrolase
From Saccharomyces Cerevisiae
pdb|3E2V|B Chain B, Crystal Structure Of An Uncharacterized Amidohydrolase
From Saccharomyces Cerevisiae
Length = 401
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 108 GKHGWSINEFGDLTKGAVSTGRVYNPKIEGSAKEPL 143
G H +NEF D ++G ++ + NP ++ + E L
Sbjct: 88 GVHPCCVNEFADASQGDKASASIDNPSMDEAYNESL 123
>pdb|2L3M|A Chain A, Solution Structure Of The Putative Copper-Ion-Binding
Protein From Bacillus Anthracis Str. Ames
Length = 71
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTM 46
M C CV+A++ ++ + GV+ V+V L+ V + S + T+
Sbjct: 14 MSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTL 56
>pdb|1AW0|A Chain A, Fourth Metal-Binding Domain Of The Menkes Copper-
Transporting Atpase, Nmr, 20 Structures
pdb|2AW0|A Chain A, Fourth Metal-Binding Domain Of The Menkes Copper-
Transporting Atpase, Nmr, 20 Structures
Length = 72
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 4 MKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRI----LGSSPLKTMTEALEQTGRKARL 59
M C CV +++ + GVK++ V L+N + L +SP +T+ A+E G A L
Sbjct: 12 MTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP-ETLRGAIEDMGFDATL 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,510,664
Number of Sequences: 62578
Number of extensions: 261916
Number of successful extensions: 647
Number of sequences better than 100.0: 125
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 477
Number of HSP's gapped (non-prelim): 126
length of query: 228
length of database: 14,973,337
effective HSP length: 95
effective length of query: 133
effective length of database: 9,028,427
effective search space: 1200780791
effective search space used: 1200780791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.9 bits)