BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027081
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU64|SODF2_ARATH Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana
GN=FSD2 PE=1 SV=1
Length = 305
Score = 298 bits (764), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/199 (70%), Positives = 170/199 (85%), Gaps = 13/199 (6%)
Query: 34 NKKMEQRKTGGR-----------ISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAY 82
N++M+ ++ G R I+A F+LKPPPYPL+ALEPHMS++TL++HWGKHH+ Y
Sbjct: 26 NRRMQWKRNGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTY 85
Query: 83 VDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKP 142
V+NLNKQI+GT+L D SLE+VV+ SYNKG++LPAFNNAAQAWNH+FFWES++PGGGGKP
Sbjct: 86 VENLNKQILGTDL-DALSLEEVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKP 144
Query: 143 SGELLGLIERDFGSFEKFLEEFKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDK 202
+GELL LIERDFGSFE+FLE FK+AAA+ FGSGW WL YKA NR DVANAVNPLP E+DK
Sbjct: 145 TGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKA-NRLDVANAVNPLPKEEDK 203
Query: 203 SLLVVKTPNAVNPLVWDYS 221
L++VKTPNAVNPLVWDYS
Sbjct: 204 KLVIVKTPNAVNPLVWDYS 222
>sp|P28759|SODF_SOYBN Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB
PE=2 SV=1
Length = 248
Score = 253 bits (646), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 152/178 (85%), Gaps = 2/178 (1%)
Query: 41 KTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKS 100
K G +++AKF+LKPPPYPLN LEP MS+ TLEFHWGKHH+ YV+NL KQ+VGTEL DGKS
Sbjct: 18 KEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTEL-DGKS 76
Query: 101 LEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKF 160
LE++++ SYNKGD+LPAFNNAAQ WNHDFFWE MKPGGGGKPSGELL LIERDFGSF KF
Sbjct: 77 LEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKF 136
Query: 161 LEEFKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVW 218
L+EFKAAAATQFGSGWAWL Y+A + D N NP ++D L+V+K+PNAVNPLVW
Sbjct: 137 LDEFKAAAATQFGSGWAWLAYRA-RKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVW 193
>sp|P22302|SODF_NICPL Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana
plumbaginifolia GN=SODB PE=2 SV=1
Length = 202
Score = 244 bits (623), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 137/173 (79%), Gaps = 17/173 (9%)
Query: 49 KFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
KF+L+PPPYP++ALEPHMS T EFHWGKHHRAYVDNLNKQI GTEL DGK+LED+++ +
Sbjct: 1 KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTEL-DGKTLEDIILVT 59
Query: 109 YNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAA 168
YNKG LPAFNNAAQAWNH FFWESMKP GGG+PSGELL LI RDFGS++ F++EFKAAA
Sbjct: 60 YNKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAA 119
Query: 169 ATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYS 221
ATQFGSGWAWL YK ++K L +VKTPNA NPLV Y+
Sbjct: 120 ATQFGSGWAWLAYKP----------------EEKKLALVKTPNAENPLVLGYT 156
>sp|P21276|SODF1_ARATH Superoxide dismutase [Fe] 1, chloroplastic OS=Arabidopsis thaliana
GN=FSD1 PE=1 SV=4
Length = 212
Score = 221 bits (562), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 136/172 (79%), Gaps = 19/172 (11%)
Query: 46 ISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV 105
++A + LKPPP+ L+ALEPHMSK TLEFHWGKHHRAYVDNL KQ++GTEL +GK LE ++
Sbjct: 7 VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTEL-EGKPLEHII 65
Query: 106 IASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFK 165
++YN GDLLPAFNNAAQAWNH+FFWESMKPGGGGKPSGELL L+ERDF S+EKF EEF
Sbjct: 66 HSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFN 125
Query: 166 AAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
AAAATQFG+GWAWL Y ++ L VVKTPNAVNPLV
Sbjct: 126 AAAATQFGAGWAWLAYS------------------NEKLKVVKTPNAVNPLV 159
>sp|Q9FMX0|SODF3_ARATH Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana
GN=FSD3 PE=1 SV=1
Length = 263
Score = 201 bits (511), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 16/175 (9%)
Query: 45 RISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV 104
++ A + LK PPYPL+ALEP+MS+ TLE HWGKHHR YVDNLNKQ+ + G ++E++
Sbjct: 45 KVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEEL 104
Query: 105 VIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEF 164
+ A+YN G+ LP FNNAAQ +NHDFFWESM+PGGG P +L I++DFGSF F E+F
Sbjct: 105 IKATYNNGNPLPEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKF 164
Query: 165 KAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWD 219
AA TQFGSGW WLV K +++ L VVKT NA+NPLVWD
Sbjct: 165 TNAALTQFGSGWVWLVLK----------------REERRLEVVKTSNAINPLVWD 203
>sp|Q5VRL3|SODF1_ORYSJ Superoxide dismutase [Fe] 1, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os06g0115400 PE=2 SV=1
Length = 391
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
+ +P PYP +ALEP++SK+T+E HWG H +V+ LN I G+E +G SL ++++S+
Sbjct: 124 IEQQPLPYPSDALEPYISKETVEQHWGVHQNIHVERLNGMIGGSEW-EGMSLGQMMLSSF 182
Query: 110 NKGDLLP--AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
N+G P F +AAQ WNHDF+W SM+PGGGGKP LL I RDFGS++ + +F A
Sbjct: 183 NEGREAPHPPFFHAAQIWNHDFYWRSMQPGGGGKPPERLLKFINRDFGSYDGMIRQFMDA 242
Query: 168 AATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYS 221
A+TQFGSGW WL YK + V + +P+PS+ L++ K+PNA+NPLVW +S
Sbjct: 243 ASTQFGSGWVWLCYKTSKLPHV-KSRSPIPSDNYGRLVISKSPNAINPLVWGHS 295
>sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os06g0143000 PE=2 SV=1
Length = 255
Score = 170 bits (430), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 116/189 (61%), Gaps = 22/189 (11%)
Query: 33 RNKKMEQR-----KTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLN 87
R + EQR + ++ A + L PPY L+ALEP++SK T+E HWGKH + YVD+LN
Sbjct: 21 RLRSREQRQGCRSRRYSKVVAYYALTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLN 80
Query: 88 KQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELL 147
KQ+ T + G +LE+++ +YN G+ LP +NNAAQ WNH FFWESM+P GGG P +L
Sbjct: 81 KQL-ATSMFYGYTLEELIKEAYNNGNPLPEYNNAAQVWNHHFFWESMQPEGGGSPGRGVL 139
Query: 148 GLIERDFGSFEKFLEEFKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVV 207
IE+DFGSF F EEF +A + GSGW WLV K K++ VV
Sbjct: 140 QQIEKDFGSFTNFREEFIRSALSLLGSGWVWLVLK----------------RKERKFSVV 183
Query: 208 KTPNAVNPL 216
T NA++PL
Sbjct: 184 HTQNAISPL 192
>sp|Q8YSZ1|SODF_NOSS1 Superoxide dismutase [Fe] OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=sodB PE=3 SV=3
Length = 200
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 105/168 (62%), Gaps = 20/168 (11%)
Query: 50 FDLKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
F +P PY NALE + M +T E+H+GKHH+AYVDNLNK GTEL D KSLE+V+ +
Sbjct: 3 FVQEPLPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELAD-KSLEEVIQIA 61
Query: 109 YNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAA 168
+ FNNAAQ WNH FFW S+KP GGG P+GE I +DFGSF+K EEF AA
Sbjct: 62 FKDASKAGIFNNAAQVWNHTFFWNSLKPAGGGAPTGEFAAKINQDFGSFDKLKEEFSNAA 121
Query: 169 ATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPL 216
ATQFGSGWAWL+ + +L V KTPNA NPL
Sbjct: 122 ATQFGSGWAWLI------------------DDGGTLKVTKTPNAENPL 151
>sp|P77968|SODF_SYNY3 Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sodB PE=1 SV=3
Length = 199
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 98/162 (60%), Gaps = 19/162 (11%)
Query: 56 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL 115
PY ALEP +SK TLEFH KHH AYV+N N + GT+L D +S+EDV+ A
Sbjct: 9 PYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTDL-DNQSIEDVIKAVAGDASKA 67
Query: 116 PAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSG 175
FNNAAQAWNH F+W MKPGGGG+PSG L I DFGSF+ F+E FK A ATQFGSG
Sbjct: 68 GIFNNAAQAWNHSFYWNCMKPGGGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSG 127
Query: 176 WAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
WAWLV + +L V KT NA NP+
Sbjct: 128 WAWLVL------------------DNGTLKVTKTGNAENPMT 151
>sp|P50061|SODF_PLEBO Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1
Length = 199
Score = 157 bits (396), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 104/169 (61%), Gaps = 20/169 (11%)
Query: 50 FDLKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
F P P+P +ALEP+ M +T ++H+GKHH AYV NLNK + GT + + SLEDV+ S
Sbjct: 3 FTQPPLPFPKDALEPYGMKAETFDYHYGKHHAAYVTNLNKLVEGTPM-ESLSLEDVIKQS 61
Query: 109 YNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAA 168
+ + FNNAAQ WNH FFW +K GGGG P+GEL I+ FGS +KF EEF AA
Sbjct: 62 FGDSSKVGVFNNAAQVWNHTFFWNCLKAGGGGAPTGELAAKIDAAFGSLDKFKEEFSNAA 121
Query: 169 ATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
ATQFGSGWAWLV + +L V KTPNA NPLV
Sbjct: 122 ATQFGSGWAWLV------------------DDGGTLKVTKTPNAENPLV 152
>sp|Q1RH88|SODF_RICBR Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C)
GN=sodB PE=3 SV=1
Length = 209
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 97/158 (61%), Gaps = 2/158 (1%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + S F L PY + +PH + +T E+H GKHH AYV NLN + E
Sbjct: 1 MTYCDKSNQTSYPFVLPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDKEEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K+LE+++ S ++ + FNNAAQ WNH FFW S+KP GGGKPSG++L I DFGS
Sbjct: 61 QKKNLEEIIDWS-SQNQNIAIFNNAAQVWNHTFFWHSIKPNGGGKPSGKILKQINEDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLVYKANNRADVANAVN 194
FE+F E+FKA A QFGSGWAWLVY NNR + N
Sbjct: 120 FEEFCEQFKAEATGQFGSGWAWLVYH-NNRLQIVKTAN 156
>sp|P31108|SODF_LEGPH Superoxide dismutase [Fe] OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=sodB PE=3 SV=1
Length = 192
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 107/179 (59%), Gaps = 25/179 (13%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F L PY L+AL PH+SK+TLE+H+GKHH YV NLNK I GTE + +LE++++ +
Sbjct: 3 FTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEF-ESMTLEEIIMKA- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
KG + FNNAAQ WNH F+W SM P GGG+P G L I + FGSF F E+F AA
Sbjct: 61 -KGGI---FNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAA 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSLTC 228
T FGSGWAWLV ++ +L ++ T NA P+ +++ LTC
Sbjct: 117 TTFGSGWAWLV-----------------QDQSGALKIINTSNAGTPMT--EGLNALLTC 156
>sp|P19685|SODF_COXBU Superoxide dismutase [Fe] OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=sodB PE=1 SV=1
Length = 193
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 10/161 (6%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY LNALEPH+S++TLE+H GKHHRAYV+ LNK I GT + + LE+++ S
Sbjct: 3 FELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPF-EKEPLEEIIRKS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W M P GGG PSGEL I++ FGS EKF F +A
Sbjct: 61 -DGGI---FNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSAN 116
Query: 170 TQFGSGWAWLVYKANNRADV---ANAVNPLPSEKDKSLLVV 207
FGSGWAWLV N + +V NA NP+ +E K L+
Sbjct: 117 NHFGSGWAWLVKDNNGKLEVLSTVNARNPM-TEGKKPLMTC 156
>sp|P53641|SODF_PSEAE Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=sodB PE=3
SV=3
Length = 193
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 101/161 (62%), Gaps = 10/161 (6%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P PY NALEPH+S +TLE+H KHH YV NLN I GTE +GKSLE++V +S
Sbjct: 3 FELPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGTEF-EGKSLEEIVKSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W + P GGG+P+G L I FGSF+KF EEF +
Sbjct: 61 -SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSV 116
Query: 170 TQFGSGWAWLVYKANNRADVANAV---NPLPSEKDKSLLVV 207
FGSGW WLV KA+ +A+ + NPL S D LL
Sbjct: 117 GTFGSGWGWLVKKADGSLALASTIGAGNPLTS-GDTPLLTC 156
>sp|P18655|SODF_SYNE7 Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC
7942) GN=sodB PE=3 SV=1
Length = 201
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
++L P+ AL P+++K+TLEFH KHH AYV+N N + T+L DG+ +E V+ A
Sbjct: 3 YELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDL-DGQPIEAVIKAIA 61
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
FNNAAQAWNH F+W S+KP GGG P+G L I DFGSFE F+ EFK AAA
Sbjct: 62 GDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAA 121
Query: 170 TQFGSGWAWLV 180
TQFGSGWAWLV
Sbjct: 122 TQFGSGWAWLV 132
>sp|P37369|SODF_BORPE Superoxide dismutase [Fe] OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=sodB PE=3 SV=2
Length = 192
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 100/159 (62%), Gaps = 10/159 (6%)
Query: 52 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNK 111
L P PY L+AL P +SK+TLEFH+GKHH+ YV NLN I GTE + SLE++V S
Sbjct: 5 LPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGTEF-ENLSLEEIVKKSSGG 63
Query: 112 GDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQ 171
FNNAAQ WNH F+W S+ P GGG+PSG L I+ +GS + F E F +AA
Sbjct: 64 -----VFNNAAQVWNHTFYWNSLSPNGGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGN 118
Query: 172 FGSGWAWLVYKANNRADV---ANAVNPLPSEKDKSLLVV 207
FGSGW WLV KA+ D+ +NA PL + DK+LL
Sbjct: 119 FGSGWTWLVKKADGTLDIVNTSNAATPL-TTADKALLTC 156
>sp|Q4ULI1|SODF_RICFE Superoxide dismutase [Mn/Fe] OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=sodB PE=3 SV=2
Length = 209
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 98/180 (54%), Gaps = 19/180 (10%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + S F L PY + +PH + +T ++H GKHH AYV NLN + E
Sbjct: 1 MTYCNKSNQTSYPFILPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDKEEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K LE+++ S + FNNAAQ WNH FFW S+KP GGGKPSG++L I +DFGS
Sbjct: 61 QKKDLEEIIEWSSQNSNA-AIFNNAAQIWNHSFFWHSIKPQGGGKPSGKILEQINKDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPL 216
FE F E+FK A QFGSGWAWLVY D L ++KT NA P+
Sbjct: 120 FEGFCEQFKQEAVGQFGSGWAWLVY------------------HDNRLQIIKTANAGTPI 161
>sp|Q92HJ3|SODF_RICCN Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sodB PE=3 SV=1
Length = 209
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 98/180 (54%), Gaps = 19/180 (10%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + S F L PY + +PH + +T ++H GKHH YV NLN + E
Sbjct: 1 MTYCNKSNQTSYPFILPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDKEEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K LE+++ S + FNNAAQ WNH FFW S+KP GGGKPSG++L I +DFGS
Sbjct: 61 QKKDLEEIIEWSSQNSNA-AIFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPL 216
FE+F E+FK A QFGSGWAWL+Y D L ++KT NA P+
Sbjct: 120 FEEFCEQFKQEAVGQFGSGWAWLIY------------------HDNRLQIIKTANAGTPI 161
>sp|Q68WK0|SODF_RICTY Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=sodB PE=3 SV=1
Length = 209
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 100/181 (55%), Gaps = 19/181 (10%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + + S F L PY + +PH + +T ++H GKHH +YV NLN + E
Sbjct: 1 MTYCRKANQTSYPFILPDLPYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K LE ++ S +K + FNNA+Q WNH FFW S+KP GGGKPSG++ I +DFGS
Sbjct: 61 QKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPL 216
FE+F E+FK A QFGSGW W+VY N L ++KT NA P+
Sbjct: 120 FEQFCEQFKQEALGQFGSGWVWVVYNNN------------------KLQIIKTSNADTPI 161
Query: 217 V 217
V
Sbjct: 162 V 162
>sp|P09213|SODF_PHOLE Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1
SV=1
Length = 193
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 97/161 (60%), Gaps = 9/161 (5%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P+ +NALEPH+S++TLE+H+GKHH YV LN + GTEL + KSLE+++
Sbjct: 2 FELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAE-KSLEEII---- 56
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
K FNNAAQ WNH F+W + P GG+P+GE+ IE+ FGSF +F +F +A
Sbjct: 57 -KTSTGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAI 115
Query: 170 TQFGSGWAWLVYKANNRADVANAVN---PLPSEKDKSLLVV 207
FGS W WLV AN + N N P+ E LL V
Sbjct: 116 NNFGSSWTWLVKNANGSLAIVNTSNAGCPITEEGVTPLLTV 156
>sp|Q88PD5|SODF_PSEPK Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440)
GN=sodB PE=3 SV=3
Length = 198
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 101/161 (62%), Gaps = 10/161 (6%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P PY +AL+PH+SK+TLE+H KHH YV NLN + GTE +GK+LE++V +S
Sbjct: 3 FELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W + P GGG+P+G L I FGSF+KF EEF +
Sbjct: 61 -SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSV 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVN---PLPSEKDKSLLVV 207
FGSGW WLV KA+ +A+ + PL S D LL
Sbjct: 117 GTFGSGWGWLVKKADGSLALASTIGAGCPLTS-GDTPLLTC 156
>sp|P09223|SODF_PSEPU Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3
Length = 198
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 99/161 (61%), Gaps = 10/161 (6%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P PY +AL+PH+SK+TLEFH KHH YV NLN + GTE +GK+LE++V S
Sbjct: 3 FELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKTS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W + P GG+P+G L I FGSF+KF EEF +
Sbjct: 61 -SGGI---FNNAAQVWNHTFYWNCLAPNAGGQPTGALADAINAAFGSFDKFKEEFTKTSV 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVN---PLPSEKDKSLLVV 207
FGSGW WLV KA+ +A+ + PL S D LL
Sbjct: 117 GTFGSGWGWLVKKADGSLALASTIGAGCPLTS-GDTPLLTC 156
>sp|Q9ZD15|SODF_RICPR Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii (strain
Madrid E) GN=sodB PE=3 SV=1
Length = 209
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 96/171 (56%), Gaps = 19/171 (11%)
Query: 47 SAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVI 106
S F L PY + +PH +++T ++H GKHH +YV NLN I E K LE+++
Sbjct: 11 SYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIE 70
Query: 107 ASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKA 166
S ++ NNA+Q WNH FFW S+KP GGGKPSG++ I +DFGSFE+F +FK
Sbjct: 71 WSSQNAEV-AILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQ 129
Query: 167 AAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
A QFGSGW W+VY D L ++KT NA P+V
Sbjct: 130 EAVGQFGSGWTWVVY------------------HDNKLQIIKTSNAGTPIV 162
>sp|P0A2F4|SODF_SALTY Superoxide dismutase [Fe] OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=sodB PE=3 SV=2
Length = 193
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 99/160 (61%), Gaps = 9/160 (5%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S
Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G+L I FGSF +F +F AA
Sbjct: 61 -EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAI 116
Query: 170 TQFGSGWAWLVYKANNRADV---ANAVNPLPSEKDKSLLV 206
FGSGW WLV A+ + + +NA PL ++ L V
Sbjct: 117 KNFGSGWTWLVKSADGKLAIVSTSNAGTPLTTDATPLLTV 156
>sp|P0A2F5|SODF_SALTI Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2
Length = 193
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 99/160 (61%), Gaps = 9/160 (5%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S
Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G+L I FGSF +F +F AA
Sbjct: 61 -EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAI 116
Query: 170 TQFGSGWAWLVYKANNRADV---ANAVNPLPSEKDKSLLV 206
FGSGW WLV A+ + + +NA PL ++ L V
Sbjct: 117 KNFGSGWTWLVKSADGKLAIVSTSNAGTPLTTDATPLLTV 156
>sp|P0AGD6|SODF_SHIFL Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2
Length = 193
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 23/170 (13%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWD 219
FGSGW WLV D L +V T NA PL D
Sbjct: 117 KNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTD 149
>sp|P0AGD3|SODF_ECOLI Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB
PE=1 SV=2
Length = 193
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 23/170 (13%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWD 219
FGSGW WLV D L +V T NA PL D
Sbjct: 117 KNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTD 149
>sp|P0AGD4|SODF_ECOL6 Superoxide dismutase [Fe] OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=sodB PE=3 SV=2
Length = 193
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 23/170 (13%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWD 219
FGSGW WLV D L +V T NA PL D
Sbjct: 117 KNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTD 149
>sp|P0AGD5|SODF_ECO57 Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3
SV=2
Length = 193
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 23/170 (13%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWD 219
FGSGW WLV D L +V T NA PL D
Sbjct: 117 KNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTD 149
>sp|P84612|SODF_PSEHT Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=sodB PE=1 SV=1
Length = 192
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 9/161 (5%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY ++ALEPH+SK+TLEFH GKHH YV LN I GT+ + KSLE++V +S
Sbjct: 2 FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKF-ENKSLEEIVCSS- 59
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+ G FNNAAQ WNH F+W S+ P GGG P+G + I +GSF+ F E A
Sbjct: 60 DGG----VFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAV 115
Query: 170 TQFGSGWAWLVYKANNRADV---ANAVNPLPSEKDKSLLVV 207
FGS W WLV A+ D+ +NA PL + +L V
Sbjct: 116 NNFGSSWTWLVKLADGSLDIVNTSNAATPLTDDGVTPILTV 156
>sp|O30970|SODF_RHOCA Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1
SV=1
Length = 200
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 102/182 (56%), Gaps = 23/182 (12%)
Query: 50 FDLKPPPYPLNALEP-HMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
F+L PY +AL MSK+TLE+H HH+AYVDN NK I GTE +GKS+E++V +
Sbjct: 3 FELPALPYAHDALASLGMSKETLEYHHDLHHKAYVDNGNKLIAGTEW-EGKSVEEIVKGT 61
Query: 109 YNKGDLLPA--FNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKA 166
Y G + + FNNA+Q WNH FWE M PG K G L + FGS KF E+F A
Sbjct: 62 YCAGAVAQSGIFNNASQHWNHAQFWEMMGPGEDKKMPGALEKALVESFGSVAKFKEDFAA 121
Query: 167 AAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSL 226
A A QFGSGWAWLV + D +L + KT N VNPL + ++ L
Sbjct: 122 AGAGQFGSGWAWLV-----------------KDSDGALKITKTENGVNPLC--FGQTALL 162
Query: 227 TC 228
C
Sbjct: 163 GC 164
>sp|O15905|SODF_BABBO Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1
Length = 199
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F L PY + L PH+S++TL FH+GKHH YV+ LN I GT L + ++E++++
Sbjct: 3 FKLPALPYGMRELIPHISEETLSFHYGKHHAGYVNKLNSLIKGTPL-ESCTIEELIL--- 58
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G FNNAAQ WNH F+W SM P GG+P+G + IE FGSF F +F A
Sbjct: 59 --GQTGAVFNNAAQIWNHTFYWNSMGPNCGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLA 116
Query: 170 TQFGSGWAWLVYKANNRADVA---NAVNPLPSEKDKSLLVV 207
FGSGW WLV K + AD+ +A +PL + LL
Sbjct: 117 GHFGSGWGWLVLKDDGTADIVQTHDAGSPLKENLGRPLLCC 157
>sp|P19665|SODF_PORGI Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis (strain
ATCC BAA-308 / W83) GN=sodB PE=1 SV=2
Length = 191
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 92/149 (61%), Gaps = 9/149 (6%)
Query: 51 DLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYN 110
+L PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S
Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS-- 60
Query: 111 KGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAAT 170
+G + FNNA Q NH+ ++ +PG GG P G+L I++ FGSFEKF EEF A T
Sbjct: 61 EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTT 117
Query: 171 QFGSGWAWLVYKANNRADVA---NAVNPL 196
FGSGW WL AN + + NA NP+
Sbjct: 118 LFGSGWVWLASDANGKLSIEKEPNAGNPV 146
>sp|Q9Y1A9|SODF_PLAVI Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1
Length = 198
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 94/172 (54%), Gaps = 24/172 (13%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSLTC 228
WL NN+ L++++T +A NP+ D + LTC
Sbjct: 124 GWLALNNNNK-----------------LVILQTHDAGNPIK-DNTGIPILTC 157
>sp|Q9TW89|SODF_PLAFA Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3
SV=1
Length = 198
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 94/172 (54%), Gaps = 24/172 (13%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSLTC 228
WL NN+ L++++T +A NP+ D + LTC
Sbjct: 124 GWLALNNNNK-----------------LVILQTHDAGNPIK-DNTGIPILTC 157
>sp|Q8IAY6|SODF_PLAF7 Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7)
GN=SODB PE=1 SV=1
Length = 198
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 94/172 (54%), Gaps = 24/172 (13%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSLTC 228
WL NN+ L++++T +A NP+ D + LTC
Sbjct: 124 GWLALNNNNK-----------------LVILQTHDAGNPIK-DNTGIPILTC 157
>sp|Q27740|SODF_PLAFX Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3)
GN=SODB PE=1 SV=1
Length = 198
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 94/172 (54%), Gaps = 24/172 (13%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSLTC 228
WL NN+ L++++T +A NP+ D + LTC
Sbjct: 124 GWLALNNNNK-----------------LVILQTHDAGNPIK-DNTGIPILTC 157
>sp|Q9XD74|SODF_RHIME Superoxide dismutase [Mn] OS=Rhizobium meliloti (strain 1021)
GN=sodB PE=1 SV=3
Length = 200
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 95/169 (56%), Gaps = 22/169 (13%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL P+MS++TLE+H KHH AYV N NK L D SLED+V SY
Sbjct: 3 FELPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEEAGLSD-LSLEDIVKKSY 61
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKP-SGELLGLIERDFGSFEKFLEEFKAAA 168
G P FNNA Q +NH FW+ MK GGGG G+L I+ D G ++KF +F AA
Sbjct: 62 --GTNQPLFNNAGQHYNHVHFWKWMKKGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAG 119
Query: 169 ATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
A QFGSGWAWL S K+ L + KTPN NPLV
Sbjct: 120 AGQFGSGWAWL------------------SVKNGKLEISKTPNGENPLV 150
>sp|Q9Y1B0|SODF_PLAMA Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1
Length = 198
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 93/172 (54%), Gaps = 24/172 (13%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P G + I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYSVSSSLTC 228
WL NN+ L++++T +A NP+ D + LTC
Sbjct: 124 GWLALNNNNK-----------------LVILQTHDAGNPIK-DNTGIPILTC 157
>sp|P34107|SODF_ENTHI Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2
SV=1
Length = 190
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 24/168 (14%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F L PY NALEPH+SK+TLEFH KHH YV+ LN + GTE + K+LE+++
Sbjct: 3 FQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTE-QEHKTLEELI---- 57
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+ +NNAAQAWNH F+W+ M G G KPS +L+ + FG E+F ++F A
Sbjct: 58 KQKPTQAIYNNAAQAWNHAFYWKCM-CGCGVKPSEQLIAKLTAAFGGLEEFKKKFTEKAV 116
Query: 170 TQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
FGSGW WLV E D L ++ T +AVNP+
Sbjct: 117 GHFGSGWCWLV------------------EHDGKLEIIDTHDAVNPMT 146
>sp|Q81LW0|SODM1_BACAN Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1
SV=1
Length = 203
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
Query: 48 AKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVV- 105
AK +L PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V
Sbjct: 2 AKHELPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVA 60
Query: 106 -IASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEF 164
+ + NN NH FFW + P GGG+P GEL IE FGSF+ F EEF
Sbjct: 61 NLNEVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEF 120
Query: 165 KAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYS 221
A AT+FGSGWAWLV N +V + N +D L KTP + VW+++
Sbjct: 121 AKAGATRFGSGWAWLVVN-NGELEVTSTPN-----QDSPLTEGKTP-VIGLDVWEHA 170
>sp|P00449|SODM_GEOSE Superoxide dismutase [Mn] OS=Geobacillus stearothermophilus GN=sodA
PE=1 SV=2
Length = 204
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
F+L PYP +ALEPH+ K+T+ H KHH YV NLN + G KSLE+++ +
Sbjct: 3 FELPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLE 62
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
+ + NN NH FW + P GGG+P+GEL I + FGSF F +EF A
Sbjct: 63 ALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELADAINKKFGSFTAFKDEFSKA 122
Query: 168 AATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTP 210
AA +FGSGWAWLV N ++ + N +D ++ KTP
Sbjct: 123 AAGRFGSGWAWLVVN-NGELEITSTPN-----QDSPIMEGKTP 159
>sp|P22799|SODM_RAOPL Superoxide dismutase [Fe] (Fragment) OS=Raoultella planticola
GN=sodA PE=1 SV=3
Length = 170
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 89/167 (53%), Gaps = 17/167 (10%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
++L PY +ALEPH+ T E H KHH YV NLN + GTE D K + D++
Sbjct: 3 YELPQLPYAYDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFAD-KDINDLIAML- 60
Query: 110 NKGDLLPA------FNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEE 163
D LPA NN NH FWE + PGG P GE+ I+ FGSF+ F EE
Sbjct: 61 ---DALPADKQTAVRNNGGGHANHTLFWEVIAPGGSNTPVGEVAKAIDAKFGSFDAFKEE 117
Query: 164 FKAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTP 210
F AA T+FGSGWAWL+ ++ AV P++ D ++ KTP
Sbjct: 118 FAKAATTRFGSGWAWLIVDGDSV-----AVTSTPNQ-DSPVMEGKTP 158
>sp|P28760|SODM_BACCA Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2
Length = 204
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
F+L PYP +ALEPH+ K+T+ H KHH YV NLN + G KSLE+++ +
Sbjct: 3 FELPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLE 62
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
+ + NN NH FW + P GGG+P+GEL I + FGSF F +EF A
Sbjct: 63 ALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELAEAINKKFGSFTAFKDEFSKA 122
Query: 168 AATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTP 210
AA +FGSGWAWLV N ++ + N +D ++ KTP
Sbjct: 123 AAGRFGSGWAWLVVN-NGELEITSTPN-----QDSPIMEGKTP 159
>sp|Q59094|SODM_ACIAD Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1)
GN=sodA PE=3 SV=1
Length = 228
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 24/173 (13%)
Query: 48 AKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV--V 105
A+F P PY NAL+P + + T+E H+GKHH+AYVDNLN QI D L +
Sbjct: 23 AEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQ 82
Query: 106 IASYNKGDLLPAFNNAAQAWNHDFFWESM-KPGGGGKPSGELLGLIERDFGSFEKFLEEF 164
I+ YN NN +NH FFWES+ G+PS L+ I +DFGS + F ++F
Sbjct: 83 ISKYNTA----VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKF 138
Query: 165 KAAAATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
AA+ +FGSGWAWL+ N + L V TPN NPL+
Sbjct: 139 NEAASGRFGSGWAWLIVTPNGK-----------------LAVTSTPNQDNPLM 174
>sp|Q9KD10|SODM_BACHD Superoxide dismutase [Mn] OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=sodA PE=3 SV=1
Length = 202
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
F+L PYP NALEPH+ + T+ H GKHH YV LN + G KS+E +V +
Sbjct: 3 FELPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLD 62
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
+ + NN NH FW+ + P GGG P+GEL I +FGSF++F E+F A
Sbjct: 63 AVPENIRTAVRNNGGGHANHTLFWQILSPNGGGAPTGELADAINAEFGSFDQFKEKFADA 122
Query: 168 AATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLV 217
AA +FGSGWAWLV D L + TPN PL+
Sbjct: 123 AANRFGSGWAWLVV------------------NDGKLEITSTPNQDTPLM 154
>sp|Q818I1|SODM1_BACCR Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=sodA1 PE=3 SV=1
Length = 218
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 56 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVV--IASYNKG 112
PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V + +
Sbjct: 25 PYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVANLNEVPEA 83
Query: 113 DLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQF 172
NN NH FFW + P GGG+P GEL IE FGSF+ F EEF A AT+F
Sbjct: 84 IRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRF 143
Query: 173 GSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPLVWDYS 221
GSGWAWLV N +V + N +D L KTP + VW+++
Sbjct: 144 GSGWAWLVVN-NGELEVTSTPN-----QDSPLTEGKTP-VIGLDVWEHA 185
>sp|Q9RUV2|SODM_DEIRA Superoxide dismutase [Mn] OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=sodA PE=1 SV=3
Length = 211
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 92/163 (56%), Gaps = 19/163 (11%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
+ L PY +ALEPH+ T+E H KHH+ YVDN NK + GTE D +E ++
Sbjct: 3 YTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFAD-LPVEQLI---- 57
Query: 110 NKGDLLPA------FNNAAQAWNHDFFWESMKPG----GGGKPSGELLGLIERDFGSFEK 159
+ D +PA NNA NH FW+ M G G +PSGELL I FGSF+
Sbjct: 58 QQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDA 117
Query: 160 FLEEFKAAAATQFGSGWAWLVYKANNRADV---ANAVNPLPSE 199
F ++F+ AA T+FGSGWAWLV K + + DV AN NPL E
Sbjct: 118 FKQKFEDAAKTRFGSGWAWLVVK-DGKLDVVSTANQDNPLMGE 159
>sp|P0C0F8|SODM_XANCP Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=sodA PE=3
SV=1
Length = 203
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 91/169 (53%), Gaps = 20/169 (11%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
+ L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V +
Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLK 61
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
S + P NN NH FW M P GGG+P GE+ I++D G FEKF E F A
Sbjct: 62 SLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKA 121
Query: 168 AATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPL 216
A ++FGSGWAWL +V P DK ++V T N +PL
Sbjct: 122 ALSRFGSGWAWL------------SVTP-----DKKVVVESTANQDSPL 153
>sp|P0C0F9|SODM_XANC8 Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=sodA PE=3 SV=1
Length = 203
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 91/169 (53%), Gaps = 20/169 (11%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
+ L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V +
Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLK 61
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
S + P NN NH FW M P GGG+P GE+ I++D G FEKF E F A
Sbjct: 62 SLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKA 121
Query: 168 AATQFGSGWAWLVYKANNRADVANAVNPLPSEKDKSLLVVKTPNAVNPL 216
A ++FGSGWAWL +V P DK ++V T N +PL
Sbjct: 122 ALSRFGSGWAWL------------SVTP-----DKKVVVESTANQDSPL 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,278,496
Number of Sequences: 539616
Number of extensions: 4350233
Number of successful extensions: 9925
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9325
Number of HSP's gapped (non-prelim): 245
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)