Query 027085
Match_columns 228
No_of_seqs 206 out of 1547
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 07:20:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r0j_A Ubiquitin carrier prote 100.0 3.9E-40 1.3E-44 265.8 12.2 139 3-154 8-148 (149)
2 4gpr_A Ubiquitin-conjugating e 100.0 5.6E-40 1.9E-44 265.5 12.3 138 3-153 11-150 (151)
3 2c2v_B Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44 267.8 10.8 139 3-154 12-152 (154)
4 2ayv_A Ubiquitin-conjugating e 100.0 9E-40 3.1E-44 268.2 12.5 137 3-152 28-166 (166)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.1E-39 3.7E-44 268.5 12.8 142 3-157 11-154 (169)
6 1zdn_A Ubiquitin-conjugating e 100.0 5.3E-40 1.8E-44 267.5 10.5 137 3-152 20-158 (158)
7 1yh2_A HSPC150 protein similar 100.0 1.1E-39 3.9E-44 268.3 12.4 143 3-155 11-156 (169)
8 1z2u_A Ubiquitin-conjugating e 100.0 1.1E-39 3.7E-44 263.4 11.6 138 3-153 11-150 (150)
9 1jat_A Ubiquitin-conjugating e 100.0 1.1E-39 3.6E-44 264.9 10.9 140 3-155 12-153 (155)
10 2aak_A UBC1, ubiquitin conjuga 100.0 1.9E-39 6.6E-44 262.5 12.0 139 3-154 11-151 (152)
11 2c4o_A Ubiquitin-conjugating e 100.0 1.8E-39 6.1E-44 266.2 12.0 138 3-153 26-165 (165)
12 2f4w_A Ubiquitin-conjugating e 100.0 2.9E-39 9.9E-44 269.9 12.7 160 3-162 21-180 (187)
13 2e2c_A Ubiquitin conjugating e 100.0 4.2E-39 1.4E-43 261.7 13.0 138 3-154 16-155 (156)
14 1fxt_A Ubiquitin-conjugating e 100.0 9.1E-40 3.1E-44 263.6 8.7 138 3-153 8-149 (149)
15 3h8k_A Ubiquitin-conjugating e 100.0 9.1E-39 3.1E-43 261.5 13.5 141 3-153 10-163 (164)
16 2ucz_A UBC7, ubiquitin conjuga 100.0 9.3E-39 3.2E-43 261.7 12.3 141 3-153 11-164 (165)
17 3bzh_A Ubiquitin-conjugating e 100.0 1.2E-38 4.2E-43 267.5 12.6 138 3-153 55-194 (194)
18 3rcz_B SUMO-conjugating enzyme 100.0 9.1E-39 3.1E-43 261.6 11.0 140 3-153 17-163 (163)
19 2pwq_A Ubiquitin conjugating e 100.0 4.2E-39 1.4E-43 274.3 8.9 164 3-179 30-198 (216)
20 2bep_A Ubiquitin-conjugating e 100.0 2.3E-38 7.8E-43 258.0 11.6 137 4-153 16-158 (159)
21 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.8E-38 6.2E-43 266.2 11.2 137 4-153 40-192 (193)
22 2gjd_A Ubiquitin-conjugating e 100.0 2.5E-38 8.7E-43 257.3 10.7 140 3-153 11-157 (157)
23 1i7k_A Ubiquitin-conjugating e 100.0 2E-38 6.7E-43 263.2 10.1 138 4-155 38-177 (179)
24 1wzv_A Ubiquitin-conjugating e 100.0 4.2E-38 1.4E-42 255.4 10.4 140 3-155 11-153 (155)
25 2grr_A Ubiquitin-conjugating e 100.0 6.1E-38 2.1E-42 256.1 9.9 140 3-153 14-160 (161)
26 3k9o_A Ubiquitin-conjugating e 100.0 1.4E-37 4.7E-42 262.3 12.3 163 5-180 14-185 (201)
27 3fn1_B NEDD8-conjugating enzym 100.0 1.7E-37 5.9E-42 254.6 11.8 140 3-153 21-167 (167)
28 3rz3_A Ubiquitin-conjugating e 100.0 1.3E-36 4.6E-41 252.9 13.3 144 3-156 14-176 (183)
29 1tte_A Ubiquitin-conjugating e 100.0 1.1E-37 3.8E-42 265.4 6.7 139 3-154 9-151 (215)
30 1yrv_A Ubiquitin-conjugating l 100.0 3.5E-37 1.2E-41 253.5 8.9 136 3-150 30-168 (169)
31 1c4z_D UBCH7, ubiquitin conjug 100.0 3.9E-37 1.3E-41 249.5 8.8 140 3-155 9-151 (154)
32 3e46_A Ubiquitin-conjugating e 100.0 1.3E-36 4.3E-41 264.4 12.3 139 4-155 65-209 (253)
33 2onu_A Ubiquitin-conjugating e 100.0 2.9E-37 1E-41 249.9 6.8 129 14-155 17-149 (152)
34 2awf_A Ubiquitin-conjugating e 100.0 1.6E-36 5.6E-41 250.2 10.1 135 3-147 24-172 (172)
35 2y9m_A Ubiquitin-conjugating e 100.0 8.4E-36 2.9E-40 245.9 13.1 127 15-153 36-168 (172)
36 1y8x_A Ubiquitin-conjugating e 100.0 8.4E-36 2.9E-40 243.2 11.7 126 11-150 19-147 (160)
37 2z5d_A Ubiquitin-conjugating e 100.0 1.6E-36 5.4E-41 251.6 5.8 130 14-157 40-173 (179)
38 4ddg_A Ubiquitin-conjugating e 100.0 1.3E-35 4.6E-40 273.2 12.2 141 3-156 10-152 (399)
39 1yf9_A Ubiquitin carrier prote 100.0 6E-36 2.1E-40 246.6 8.3 140 4-160 20-163 (171)
40 2nvu_C NEDD8-conjugating enzym 100.0 1.7E-35 5.8E-40 245.7 10.9 127 11-151 39-168 (180)
41 3o2u_A NEDD8-conjugating enzym 100.0 5.4E-34 1.8E-38 238.5 11.1 126 12-151 43-177 (190)
42 2fo3_A Ubiquitin-conjugating e 100.0 6.7E-33 2.3E-37 217.4 9.6 108 3-113 13-123 (125)
43 2h2y_A Ubiquitin-conjugating e 100.0 3.4E-32 1.1E-36 216.4 9.9 106 3-111 27-135 (136)
44 4ds2_A Ubiquitin-conjugating e 100.0 1E-32 3.6E-37 226.3 7.0 120 13-145 37-163 (167)
45 3ceg_A Baculoviral IAP repeat- 100.0 8.9E-32 3E-36 240.5 10.0 143 4-154 84-244 (323)
46 2q0v_A Ubiquitin-conjugating e 100.0 8.8E-32 3E-36 218.7 7.0 115 3-122 28-151 (156)
47 2a7l_A Hypothetical ubiquitin- 100.0 2.2E-31 7.5E-36 211.8 7.8 102 3-107 29-136 (136)
48 2a4d_A Ubiquitin-conjugating e 100.0 3.7E-31 1.3E-35 215.8 7.5 117 3-121 32-156 (160)
49 1jat_B Ubiquitin-conjugating e 100.0 3.6E-31 1.2E-35 210.8 3.5 113 4-121 14-135 (138)
50 2hlw_A Ubiquitin-conjugating e 100.0 8E-31 2.7E-35 215.7 4.1 117 3-121 42-166 (170)
51 1zuo_A Hypothetical protein LO 100.0 2E-30 6.8E-35 216.2 2.7 129 4-152 35-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.8 1E-20 3.4E-25 153.5 -0.0 81 18-100 48-144 (172)
53 3r3q_A Suppressor protein STP2 99.6 2.9E-16 9.9E-21 127.7 7.1 91 19-113 54-161 (162)
54 3kpa_A Probable ubiquitin fold 99.4 9.8E-14 3.3E-18 110.4 2.2 65 24-94 56-133 (168)
55 3obq_A Tumor susceptibility ge 99.3 1.8E-12 6.3E-17 103.6 5.0 79 22-109 50-139 (146)
56 2ebm_A RWD domain-containing p 92.0 0.24 8.3E-06 37.3 5.3 41 26-66 38-78 (128)
57 2day_A Ring finger protein 25; 89.8 0.59 2E-05 35.0 5.7 42 25-66 39-82 (128)
58 2yz0_A Serine/threonine-protei 89.8 0.7 2.4E-05 35.1 6.1 41 25-66 45-85 (138)
59 2ebk_A RWD domain-containing p 89.0 0.97 3.3E-05 33.9 6.3 41 25-66 39-79 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 84.4 0.56 1.9E-05 35.6 2.7 23 43-65 63-85 (137)
61 2daw_A RWD domain containing p 83.7 1.1 3.9E-05 35.0 4.3 23 44-66 76-98 (154)
62 2dax_A Protein C21ORF6; RWD do 81.5 0.89 3.1E-05 35.3 2.8 24 44-67 74-97 (152)
63 3zqs_A E3 ubiquitin-protein li 81.5 7.5 0.00026 31.6 8.4 66 22-107 22-87 (186)
64 3rls_A YAF9, protein AF-9 homo 33.7 51 0.0017 26.4 4.5 44 22-67 29-72 (175)
65 2bum_A Protocatechuate 3,4-dio 30.7 35 0.0012 28.0 3.2 26 40-65 108-138 (209)
66 1cn3_F Fragment of coat protei 26.9 13 0.00044 20.4 -0.1 14 204-217 15-28 (29)
67 2cwb_A Chimera of immunoglobul 23.6 17 0.00058 26.9 0.0 24 131-154 33-56 (108)
68 3qrl_A Transcription initiatio 20.2 1.8E+02 0.006 22.3 5.2 41 25-67 32-75 (140)
No 1
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=3.9e-40 Score=265.83 Aligned_cols=139 Identities=19% Similarity=0.512 Sum_probs=129.9
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|+||++
T Consensus 8 kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 87 (149)
T 2r0j_A 8 KETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLD 87 (149)
T ss_dssp HHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEech
Confidence 45567788999999999999999999999999999999999999999999999999999999997 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 154 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~ 154 (228)
+|+ ++|+|+++|.+||.+|++||.+|+++++ ++.++|+ +|++|++.|.++||+|+++||..
T Consensus 88 iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 88 ILK---DKWSPALQIRTVLLSIQALLSSPEPDDP-LDSKVAE---------HFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp GGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSC-SSCHHHH---------HHHHCHHHHHHHHHHHHHHHSCC
T ss_pred hcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHHccC
Confidence 998 8999999999999999999999999998 7777765 89999999999999999999863
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=5.6e-40 Score=265.45 Aligned_cols=138 Identities=22% Similarity=0.566 Sum_probs=129.5
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|+||++
T Consensus 11 kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~ 90 (151)
T 4gpr_A 11 KELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLD 90 (151)
T ss_dssp HHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcc
Confidence 45567888999999999999999999999999999999999999999999999999999999997 6779999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
+|+ ++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.
T Consensus 91 iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 91 ILK---DQWSPALTLSRVLLSISSLLTDPNPSDP-LDPEVAN---------VLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHHCCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccc---CCCCCCCcHHHHHHHHHHHhcCCCCCCc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhcC
Confidence 998 8999999999999999999999999998 7777665 8999999999999999999985
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-40 Score=267.81 Aligned_cols=139 Identities=19% Similarity=0.442 Sum_probs=128.3
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|.||++
T Consensus 12 kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 91 (154)
T 2c2v_B 12 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLD 91 (154)
T ss_dssp HHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCH
T ss_pred HHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEch
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 154 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~ 154 (228)
+|+ ++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+||++||..
T Consensus 92 iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p-~n~~aa~---------~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 92 ILK---DKWSPALQIRTVLLSIQALLSAPNPDDP-LANDVAE---------QWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp HHH---TSCCTTCCHHHHHHHHHHHTTSCCCCCC---CHHHH---------HHHHHHHHHHHHHHHHHHHHSSC
T ss_pred hcc---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcCC
Confidence 997 8999999999999999999999999998 7777775 89999999999999999999864
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=9e-40 Score=268.24 Aligned_cols=137 Identities=23% Similarity=0.582 Sum_probs=128.1
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|.||++
T Consensus 28 kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~ 107 (166)
T 2ayv_A 28 KELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLD 107 (166)
T ss_dssp HHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcc
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 152 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a 152 (228)
+|+ ++|+|+++|.+||.+|++||.+|+++++ ++.++|+ +|++|++.|.++||+|+++||
T Consensus 108 iL~---~~WsP~~ti~~vL~sI~sll~~pn~~~P-ln~~aa~---------l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 108 ILK---DQWSPALTISKVLLSISSLLTDPNPDDP-LVPEIAH---------LYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHC
T ss_pred ccc---ccCCCCCcHHHHHHHHHHHHhCCCCCch-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhC
Confidence 998 8999999999999999999999999998 6776665 899999999999999999996
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=268.50 Aligned_cols=142 Identities=25% Similarity=0.518 Sum_probs=130.9
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|.||++
T Consensus 11 kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~ 90 (169)
T 1ayz_A 11 RDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLD 90 (169)
T ss_dssp HHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCG
T ss_pred HHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeeh
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLA 157 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~~ 157 (228)
+|+ +.|+|+++|.+||.+|++||.+|++++| ++.++|+ +|++|++.|.++||+||++|+.....
T Consensus 91 iL~---~~WsP~~~i~~vL~si~~ll~~Pn~~~P-~n~~aa~---------~~~~d~~~y~~~~r~~~~~~a~~~~~ 154 (169)
T 1ayz_A 91 ILQ---NRWTPTYDVASILTSIQSLFNDPNPASP-ANVEAAT---------LFKDHKSQYVKRVKETVEKSWEDDMD 154 (169)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHTCCCCSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhc---cCCCCcCcHHHHHHHHHHHHhCCCCCcH-HHHHHHH---------HHHHCHHHHHHHHHHHHHHHcCCCcc
Confidence 997 8999999999999999999999999998 6666654 89999999999999999999986543
No 6
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-40 Score=267.48 Aligned_cols=137 Identities=16% Similarity=0.369 Sum_probs=128.1
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|+||++
T Consensus 20 kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 99 (158)
T 1zdn_A 20 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVN 99 (158)
T ss_dssp HHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHH
T ss_pred HHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehh
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 152 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a 152 (228)
+|+ ++|+|+++|.+||.+|+++|.+|+|+++ +|.++|+ +|.+|++.|.++||+||++||
T Consensus 100 iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p-~n~~aa~---------~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 100 VLK---RDWTAELGIRHVLLTIKCLLIHPNPESA-LNEEAGR---------LLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp HHT---TTCCTTCCHHHHHHHHHHHHHSCCGGGC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHC
T ss_pred hcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhC
Confidence 997 8999999999999999999999999998 6766665 899999999999999999996
No 7
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=268.28 Aligned_cols=143 Identities=22% Similarity=0.488 Sum_probs=131.7
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|.||++
T Consensus 11 kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~ 90 (169)
T 1yh2_A 11 RELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLD 90 (169)
T ss_dssp HHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecc
Confidence 45556788999999999999999999999999999999999999999999999999999999997 6778999999999
Q ss_pred CCCCCC-CCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 81 MSDFHP-ESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 81 ~L~~~~-~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
+|++++ ++|+|+++|.+||.+|++||.+|+++++ ++.++|+ +|.+|++.|.++||+|+++||...
T Consensus 91 iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~r~~~~~~a~~~ 156 (169)
T 1yh2_A 91 VLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDP-LMADISS---------EFKYNKPAFLKNARQWTEKHARQK 156 (169)
T ss_dssp GGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHSCCC
T ss_pred cccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcch-HhHHHHH---------HHHhhHHHHHHHHHHHHHHHcccc
Confidence 998654 7999999999999999999999999998 6766665 899999999999999999999743
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.1e-39 Score=263.42 Aligned_cols=138 Identities=22% Similarity=0.569 Sum_probs=128.7
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||++
T Consensus 11 kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 90 (150)
T 1z2u_A 11 KELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 90 (150)
T ss_dssp HHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeec
Confidence 44556788999999999999999999999999999999999999999999999999999999997 7889999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
+|+ ++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.
T Consensus 91 iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 91 ILR---SQWSPALTISKVLLSICSLLCDPNPDDP-LVPEIAR---------IYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccc---CCCCCCCCHHHHHHHHHHHhhCCCCCCc-cCHHHHH---------HHHHHHHHHHHHHHHHHHHHhC
Confidence 998 8999999999999999999999999998 6666664 8999999999999999999973
No 9
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.1e-39 Score=264.91 Aligned_cols=140 Identities=16% Similarity=0.440 Sum_probs=130.2
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|.||++
T Consensus 12 kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 91 (155)
T 1jat_A 12 KETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLD 91 (155)
T ss_dssp HHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCG
T ss_pred HHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEch
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778899999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
+|+ ++|+|+++|.+||.+|++||.+|+++++ ++.++|+ +|++|++.|.++||+|+++||...
T Consensus 92 iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~~r~~~~~~a~~~ 153 (155)
T 1jat_A 92 VLK---TNWSPALQIRTVLLSIQALLASPNPNDP-LANDVAE---------DWIKNEQGAKAKAREWTKLYAKKK 153 (155)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHHSCCTTST-TCCTTHH---------HHHHCHHHHHHHHHHHHHHHSEEC
T ss_pred hhc---cCCCCCCCHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcccC
Confidence 997 8999999999999999999999999998 7777775 899999999999999999999643
No 10
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.9e-39 Score=262.49 Aligned_cols=139 Identities=23% Similarity=0.548 Sum_probs=128.3
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
.+.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|.||++
T Consensus 11 ~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 90 (152)
T 2aak_A 11 RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLD 90 (152)
T ss_dssp HHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCG
T ss_pred HHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEech
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 154 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~ 154 (228)
+|+ ++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+||++|+.+
T Consensus 91 iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 91 ILQ---NQWSPIYDVAAILTSIQSLLCDPNPNSP-ANSEAAR---------MYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp GGT---TSCCTTCCHHHHHHHHHHHHTSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHCC-
T ss_pred hhc---CCCCCCCcHHHHHHHHHHHHhCCCCCcc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHHccc
Confidence 997 8999999999999999999999999998 6666654 89999999999999999999864
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.8e-39 Score=266.22 Aligned_cols=138 Identities=22% Similarity=0.590 Sum_probs=128.6
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|.||++
T Consensus 26 kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~ 105 (165)
T 2c4o_A 26 KELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 105 (165)
T ss_dssp HHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeeh
Confidence 34556788999999999999999999999999999999999999999999999999999999997 7789999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
+|+ ++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|.+|++.|.++||+|+++||.
T Consensus 106 iL~---~~W~P~~ti~~vL~si~~ll~~pn~~~P-~n~~aa~---------~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 106 ILR---SQWSPALTISKVLLSICSLLCDPNPDDP-LVPEIAR---------IYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHTTC
T ss_pred hhc---CCCCCcCcHHHHHHHHHHHHhCCCCCcc-ccHHHHH---------HHHHHHHHHHHHHHHHHHHHhC
Confidence 998 8999999999999999999999999998 6666665 8999999999999999999973
No 12
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-39 Score=269.89 Aligned_cols=160 Identities=53% Similarity=1.009 Sum_probs=133.7
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCCCceecCCCeEeccCC
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQKKLCLSMS 82 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tPn~~v~~~G~iCl~~L 82 (228)
.+.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|||++++.+|+||+++|
T Consensus 21 kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~~~~~~~~G~ICL~iL 100 (187)
T 2f4w_A 21 QDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSIT 100 (187)
T ss_dssp HHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSBCTTSCBC----
T ss_pred HHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCCCceeccCCeEeeecc
Confidence 45566788999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhhhhhhhc
Q 027085 83 DFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLAEQRVS 162 (228)
Q Consensus 83 ~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~~~~~~~ 162 (228)
++++++|+|+++|.+||.+|++||.+|+|+.++......+++++|..+..|++....|.+.+++++++|..+.....+.+
T Consensus 101 ~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~~~~f~~~fp~~~~~~~~~~~~~~~~~ 180 (187)
T 2f4w_A 101 DFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQDELS 180 (187)
T ss_dssp ------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHHHCHHHHHHHC----------
T ss_pred ccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhcCchHHHhhHHHHHHHHHHHHHhhccc
Confidence 76679999999999999999999999999999888888899999999999999999999999999999988765544433
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-39 Score=261.65 Aligned_cols=138 Identities=21% Similarity=0.468 Sum_probs=127.5
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|.||++
T Consensus 16 kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~ 95 (156)
T 2e2c_A 16 QELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLD 95 (156)
T ss_dssp HHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECc
Confidence 34556778899999999999999999999999999999999999999999999999999999997 6779999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 154 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~ 154 (228)
+|+ ++|+|+++|.+||.+|++||.+|+++++ +|.++|+ +| +|++.|.++||+||++|+..
T Consensus 96 iL~---~~W~p~~~i~~vL~si~~ll~~pn~~~p-~n~~aa~---------~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 96 ILK---ENWTASYDVRTILLSLQSLLGEPNNASP-LNAQAAD---------MW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHTTSCCCSSC-SCHHHHH---------HT-TCHHHHHHHHHHHHHHHHHC
T ss_pred ccc---ccCCCCCcHHHHHHHHHHHHhCCCCCCH-HHHHHHH---------Hh-cCHHHHHHHHHHHHHHhccC
Confidence 997 8999999999999999999999999998 6766665 88 89999999999999999863
No 14
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=9.1e-40 Score=263.61 Aligned_cols=138 Identities=22% Similarity=0.454 Sum_probs=127.3
Q ss_pred ccchhhhhCCCCCEEEeeCCC-CceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecC-CCeEe
Q 027085 3 NGCFYHVQEPVSHVVARPSPN-DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT-QKKLC 78 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~-dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~-~G~iC 78 (228)
++.-.+++++++||++.+.++ |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+. +|.||
T Consensus 8 ~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iC 87 (149)
T 1fxt_A 8 KEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAIC 87 (149)
T ss_dssp HHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBC
T ss_pred HHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEe
Confidence 455567889999999999887 99999999999999999999999999999999999999999995 666887 99999
Q ss_pred ccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 79 LSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 79 l~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
+++|+ ++|+|+++|.+||.+|++||.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.
T Consensus 88 l~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 88 LDILK---NAWSPVITLKSALISLQALLQSPEPNDP-QDAEVAQ---------HYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp CHHHH---TSCCTTCCHHHHHHHHHHHHHSCCSSSC-SSHHHHH---------HHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCcCC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcC
Confidence 99997 8999999999999999999999999998 6766665 8999999999999999999973
No 15
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=9.1e-39 Score=261.46 Aligned_cols=141 Identities=23% Similarity=0.457 Sum_probs=128.6
Q ss_pred ccchhhhhCCCCCEEEeeCCC-CceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSPN-DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~-dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
++.-.+++++++||++.+.++ |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|+||+
T Consensus 10 kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl 89 (164)
T 3h8k_A 10 AEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCI 89 (164)
T ss_dssp HHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCC
T ss_pred HHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEee
Confidence 455578889999999998765 99999999999999999999999999999999999999999996 777899999999
Q ss_pred cCCCC----------CCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Q 027085 80 SMSDF----------HPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVE 149 (228)
Q Consensus 80 ~~L~~----------~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~ 149 (228)
++|+. +.++|+|+++|.+||.+|+++|.+|+++++ +|.++|+ +|++|++.|.++||+|++
T Consensus 90 ~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~ 159 (164)
T 3h8k_A 90 SILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESG-ANVDASK---------MWRDDREQFYKIAKQIVQ 159 (164)
T ss_dssp GGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHH
T ss_pred ecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHH
Confidence 99962 237999999999999999999999999998 6777665 899999999999999999
Q ss_pred HHHh
Q 027085 150 KYNE 153 (228)
Q Consensus 150 k~a~ 153 (228)
+++.
T Consensus 160 ~s~~ 163 (164)
T 3h8k_A 160 KSLG 163 (164)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 9874
No 16
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.3e-39 Score=261.71 Aligned_cols=141 Identities=23% Similarity=0.507 Sum_probs=127.4
Q ss_pred ccchhhhhCCCCCEEEeeCC-CCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSP-NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~-~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
++.-.+++++++||++.+.+ +|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|+||+
T Consensus 11 kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl 90 (165)
T 2ucz_A 11 KELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCI 90 (165)
T ss_dssp HHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCC
T ss_pred HHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEee
Confidence 34456788999999999975 799999999999999999999999999999999999999999996 677899999999
Q ss_pred cCCCC----------CCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Q 027085 80 SMSDF----------HPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVE 149 (228)
Q Consensus 80 ~~L~~----------~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~ 149 (228)
++|+. +.+.|+|+++|.+||.+|++||.+|+++++ +|.++|+ +|++|++.|.++||+||+
T Consensus 91 ~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p-~n~~aa~---------~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 91 SILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESG-ANIDACI---------LWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp GGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGC-CCHHHHH---------HHHTTHHHHHHHHHHHHH
T ss_pred hhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCc-hhHHHHH---------HHHHCHHHHHHHHHHHHH
Confidence 99931 148999999999999999999999999998 6666665 899999999999999999
Q ss_pred HHHh
Q 027085 150 KYNE 153 (228)
Q Consensus 150 k~a~ 153 (228)
+|++
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9875
No 17
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.2e-38 Score=267.48 Aligned_cols=138 Identities=22% Similarity=0.553 Sum_probs=128.3
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|.||++
T Consensus 55 kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~ 134 (194)
T 3bzh_A 55 KELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLD 134 (194)
T ss_dssp HHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceech
Confidence 34556788999999999999999999999999999999999999999999999999999999996 6778999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
+|+ ++|+|+++|.+||.+|++||.+|+|+++ ++.++|+ +|.+|++.|.++||+|+++||.
T Consensus 135 iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~P-ln~~aa~---------l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 135 ILK---DNWSPALTISKVLLSICSLLTDCNPADP-LVGSIAT---------QYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp GGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHCC
T ss_pred hhh---ccCCCcCcHHHHHHHHHHHHhCCCCccc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhhC
Confidence 997 8999999999999999999999999998 6666665 8999999999999999999973
No 18
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=9.1e-39 Score=261.56 Aligned_cols=140 Identities=21% Similarity=0.437 Sum_probs=127.5
Q ss_pred ccchhhhhCCCCCEEEeeCCC-----CceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCC
Q 027085 3 NGCFYHVQEPVSHVVARPSPN-----DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQK 75 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~-----dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G 75 (228)
.+.-.+++++++||++.|.++ |+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+.+|
T Consensus 17 kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G 96 (163)
T 3rcz_B 17 EERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSG 96 (163)
T ss_dssp HHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTS
T ss_pred HHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCC
Confidence 355678899999999999766 99999999999999999999999999999999999999999996 67789999
Q ss_pred eEeccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 76 KLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 76 ~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
.||+++|+ ..+.|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.
T Consensus 97 ~iCl~iL~-~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p-~n~~aa~---------~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 97 TVCLSILN-EEEGWKPAITIKQILLGIQDLLDDPNIASP-AQTEAYT---------MFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp BBCCGGGC-TTTTCCTTCCHHHHHHHHHHHHTSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHTCC
T ss_pred cEeccccC-CCCCcCCcCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHHHhCc
Confidence 99999997 224699999999999999999999999998 6766665 8999999999999999999973
No 19
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=4.2e-39 Score=274.30 Aligned_cols=164 Identities=19% Similarity=0.439 Sum_probs=129.3
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G~iCl 79 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+ .+|.||+
T Consensus 30 kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL 109 (216)
T 2pwq_A 30 KELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICL 109 (216)
T ss_dssp HHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCC
T ss_pred HHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEc
Confidence 34556788999999999999999999999999999999999999999999999999999999996 56687 5899999
Q ss_pred cCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhhhh-
Q 027085 80 SMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLAE- 158 (228)
Q Consensus 80 ~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~~~- 158 (228)
++|+ +.|+|+++|.+||++|++||.+|+|++| ++.++|. +|++|++.|.++||+|+++||......
T Consensus 110 ~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~dP-ln~eaa~---------~~~~d~~~f~~~ar~~t~~ya~~~~~~~ 176 (216)
T 2pwq_A 110 DVLK---NEWSPALTIRTALLSIQALLSDPQPDDP-QDAEVAK---------MYKENHALFVKTASVWTKTFATGPKEEP 176 (216)
T ss_dssp HHHH---HHCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHSCCC----
T ss_pred hhhc---ccCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcCCCcccc
Confidence 9997 8899999999999999999999999998 6666664 899999999999999999999865432
Q ss_pred -hhhcccCCCCCCCCCCCCccc
Q 027085 159 -QRVSEQLSPESPNEENSRPKV 179 (228)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~ 179 (228)
++.-.+-..++..+.+....+
T Consensus 177 ~~~~v~~~~~mgf~~~~~~~al 198 (216)
T 2pwq_A 177 REVIIKKITEMGFSEDQAKNAL 198 (216)
T ss_dssp ----------------------
T ss_pred hhhHHHHHHHcCCCHHHHHHHH
Confidence 334444444554444444433
No 20
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.3e-38 Score=258.03 Aligned_cols=137 Identities=18% Similarity=0.404 Sum_probs=124.8
Q ss_pred cchhhhhC---CCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCCeE
Q 027085 4 GCFYHVQE---PVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQKKL 77 (228)
Q Consensus 4 ~~~~l~~~---p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G~i 77 (228)
+.-.++++ +++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ |+||+ .+|.|
T Consensus 16 El~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~i 95 (159)
T 2bep_A 16 EFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 95 (159)
T ss_dssp HHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBB
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEE
Confidence 33445553 68899999999999999999999999999999999999999999999999999996 67788 48999
Q ss_pred eccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 78 CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 78 Cl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
|+++|+ ++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.
T Consensus 96 Cl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 96 CLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDP-QDAVVAN---------QYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp CCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHSC
T ss_pred eChhhh---ccCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhhc
Confidence 999998 8999999999999999999999999998 6666665 8999999999999999999985
No 21
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-38 Score=266.19 Aligned_cols=137 Identities=23% Similarity=0.476 Sum_probs=123.4
Q ss_pred cchhhhhCCC-------------CCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--C
Q 027085 4 GCFYHVQEPV-------------SHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--N 68 (228)
Q Consensus 4 ~~~~l~~~p~-------------~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n 68 (228)
+.-.++++++ +||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |
T Consensus 40 El~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 119 (193)
T 2f4z_A 40 ELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWH 119 (193)
T ss_dssp HHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCcc
Confidence 4445677776 799999999999999999999999999999999999999999999999999995 5
Q ss_pred ceec-CCCeEeccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHH
Q 027085 69 GRFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEY 147 (228)
Q Consensus 69 ~~v~-~~G~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~ 147 (228)
+||+ .+|.||+++|+ ++|+|+++|.+||++|++||.+|+|+++ ++.++|+ +|++|++.|.++||+|
T Consensus 120 PNI~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pnp~~P-~n~~aa~---------l~~~d~~~f~~~ar~~ 186 (193)
T 2f4z_A 120 PNISSQTGAICLDILK---HEWSPALTIRTALLSIQAMLADPVPTDP-QDAEVAK---------MMIENHPLFVQTAKLW 186 (193)
T ss_dssp TTBCTTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHH
T ss_pred CCCcCCCCEEECcccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHH
Confidence 6677 58999999998 8999999999999999999999999998 6766665 8999999999999999
Q ss_pred HHHHHh
Q 027085 148 VEKYNE 153 (228)
Q Consensus 148 v~k~a~ 153 (228)
+++||.
T Consensus 187 t~~ya~ 192 (193)
T 2f4z_A 187 TETFAK 192 (193)
T ss_dssp HHHHCC
T ss_pred HHHHcc
Confidence 999985
No 22
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.5e-38 Score=257.32 Aligned_cols=140 Identities=21% Similarity=0.432 Sum_probs=126.0
Q ss_pred ccchhhhhCCCCCEEEeeCC-----CCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCC
Q 027085 3 NGCFYHVQEPVSHVVARPSP-----NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQK 75 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~-----~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G 75 (228)
++.-.+++++++||++.|.+ +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+.+|
T Consensus 11 kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 90 (157)
T 2gjd_A 11 EERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSG 90 (157)
T ss_dssp HHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTS
T ss_pred HHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCC
Confidence 34556788999999999864 489999999999999999999999999999999999999999996 67788999
Q ss_pred eEeccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 76 KLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 76 ~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
.||+++|+. .++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.
T Consensus 91 ~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 91 TICLSILNE-DQDWRPAITLKQIVLGVQDLLDSPNPNSP-AQEPAWR---------SFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp BBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCCTTCC-CCHHHHH---------HHHHCHHHHHHHHHHHHHHTBC
T ss_pred cEeeecccC-CCCCCCCCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHHHhcC
Confidence 999999972 13899999999999999999999999998 6666664 8999999999999999999973
No 23
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-38 Score=263.17 Aligned_cols=138 Identities=24% Similarity=0.453 Sum_probs=126.8
Q ss_pred cchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEeccC
Q 027085 4 GCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLSM 81 (228)
Q Consensus 4 ~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~~ 81 (228)
+.-.+++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|+||+++
T Consensus 38 El~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~i 117 (179)
T 1i7k_A 38 ELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDI 117 (179)
T ss_dssp HHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGG
T ss_pred HHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEccc
Confidence 4456778899999999999999999999999999999999999999999999999999999997 67789999999999
Q ss_pred CCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 82 SDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 82 L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
|+ +.|+|+++|.+||.+|++||.+|+++++ ++.++|+ +| +|++.|.++|++++++++..+
T Consensus 118 L~---~~WsP~~ti~~vL~sI~sll~~Pn~~~P-ln~~aa~---------l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 118 LK---EKWSALYDVRTILLSIQSLLGEPNIDSP-LNTHAAE---------LW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp GT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HT-TSHHHHHHHHHHHHHTTCC--
T ss_pred Cc---CcCCCCCCHHHHHHHHHHHHhCCCCcch-hhHHHHH---------Hh-hCHHHHHHHHHHHHHHHhccc
Confidence 97 8999999999999999999999999998 6776665 89 999999999999999988654
No 24
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.2e-38 Score=255.43 Aligned_cols=140 Identities=21% Similarity=0.408 Sum_probs=128.0
Q ss_pred ccchhhhhCCCCCEEE-eeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVA-RPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v-~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
++.-.+++++++||++ .++++|+++|+++|. |+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||+
T Consensus 11 kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl 89 (155)
T 1wzv_A 11 KELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICL 89 (155)
T ss_dssp HHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCC
T ss_pred HHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEee
Confidence 3455678899999999 889999999999999 999999999999999999999999999999996 677899999999
Q ss_pred cCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 80 SMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 80 ~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
++|+ .++|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.+.
T Consensus 90 ~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 90 PIIS--SENWKPCTKTCQVLEALNVLVNRPNIREP-LRMDLAD---------LLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp GGGC--TTTCCTTCCHHHHHHHHHHHHHSCCSSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred cCCC--ccCCCCCCcHHHHHHHHHHHHhCCCCCch-HHHHHHH---------HHHHHHHHHHHHHHHHHHHhcccC
Confidence 9993 28999999999999999999999999998 6666654 899999999999999999999743
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=6.1e-38 Score=256.05 Aligned_cols=140 Identities=19% Similarity=0.423 Sum_probs=126.5
Q ss_pred ccchhhhhCCCCCEEEeeCC-----CCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCC
Q 027085 3 NGCFYHVQEPVSHVVARPSP-----NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQK 75 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~-----~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G 75 (228)
++.-.+++++++||++.|.. +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+.+|
T Consensus 14 kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 93 (161)
T 2grr_A 14 QERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSG 93 (161)
T ss_dssp HHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTS
T ss_pred HHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCC
Confidence 34556788999999998863 689999999999999999999999999999999999999999996 67789999
Q ss_pred eEeccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 76 KLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 76 ~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
.||+++|+. .++|+|+++|.+||.+|+++|.+|+++++ ++.++|. +|++|++.|.++||+||++||.
T Consensus 94 ~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 94 TVCLSILEE-DKDWRPAITIKQILLGIQELLNEPNIQSP-AQAEAYT---------IYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp BBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHTCC
T ss_pred eEeehhcCC-CCCcCCCCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHHHHhc
Confidence 999999972 24899999999999999999999999998 6666664 8999999999999999999985
No 26
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.4e-37 Score=262.34 Aligned_cols=163 Identities=16% Similarity=0.345 Sum_probs=137.1
Q ss_pred chhhhhC---CCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCCeEe
Q 027085 5 CFYHVQE---PVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQKKLC 78 (228)
Q Consensus 5 ~~~l~~~---p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G~iC 78 (228)
.-.++++ ++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+ .+|.||
T Consensus 14 l~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iC 93 (201)
T 3k9o_A 14 FKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAIC 93 (201)
T ss_dssp HHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBC
T ss_pred HHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeee
Confidence 3445555 47899999999999999999999999999999999999999999999999999996 67788 489999
Q ss_pred ccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhhh-
Q 027085 79 LSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLA- 157 (228)
Q Consensus 79 l~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~~- 157 (228)
+++|+ ++|+|+++|.+||.+|+++|.+|+|++| ++.++|+ +|++|++.|.++||+|+++||.....
T Consensus 94 l~iL~---~~W~p~~~i~~vL~~i~~ll~~p~p~~p-~n~~aa~---------~~~~~~~~f~~~a~~~~~~~a~~~~~~ 160 (201)
T 3k9o_A 94 LDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDP-QDAVVAN---------QYKQNPEMFKQTARLWAHVYAGAPVSS 160 (201)
T ss_dssp CGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHHCCCCCC
T ss_pred Ccccc---cCCCCCCCHHHHHHHHHHHhcCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhccccccc
Confidence 99997 8999999999999999999999999998 7777765 89999999999999999999976432
Q ss_pred --hhhhcccCCCCCCCCCCCCcccc
Q 027085 158 --EQRVSEQLSPESPNEENSRPKVE 180 (228)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~ 180 (228)
-+..-++...++..+.+.+..+.
T Consensus 161 ~~~eekV~~l~~MGf~~~~a~~AL~ 185 (201)
T 3k9o_A 161 PEYTKKIENLCAMGFDRNAVIVALS 185 (201)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred chhHHHHHHHHHcCCCHHHHHHHHH
Confidence 13333444445555554444433
No 27
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.7e-37 Score=254.63 Aligned_cols=140 Identities=18% Similarity=0.335 Sum_probs=126.2
Q ss_pred ccchhhhhCCCCCEEEee-CCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARP-SPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p-~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
++.-.+++++++||++.+ +++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||+
T Consensus 21 kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl 99 (167)
T 3fn1_B 21 KEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICL 99 (167)
T ss_dssp HHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCC
T ss_pred HHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEec
Confidence 455678889999999985 568899999999 8999999999999999999999999999999996 777899999999
Q ss_pred cCCCCC---CCCCCCCcchHHHHHhhhccccC-CCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHh
Q 027085 80 SMSDFH---PESWNPMWSVSSILTGLLSFMMD-TSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 80 ~~L~~~---~~~W~p~~~i~~vL~~i~~ll~~-p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~ 153 (228)
++|+.+ +++|+|+++|.+||.+|+++|.+ |+++++ +|.++|+ +|++|++.|.++||+||++||+
T Consensus 100 ~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p-~n~eaa~---------~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 100 SLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDP-LNIEAAE---------HHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp GGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHCC
T ss_pred hhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhcC
Confidence 999732 35899999999999999999999 699998 7777665 8999999999999999999974
No 28
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.3e-36 Score=252.95 Aligned_cols=144 Identities=22% Similarity=0.452 Sum_probs=127.0
Q ss_pred ccchhhhhCCCCCEEEe-eCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVAR-PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~-p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
.+.-.+++++++||++. ++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|+||+
T Consensus 14 kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl 93 (183)
T 3rz3_A 14 LELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCI 93 (183)
T ss_dssp HHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCC
T ss_pred HHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEeh
Confidence 34556789999999999 688899999999999999999999999999999999999999999996 677899999999
Q ss_pred cCCCC----------CCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhcc------ChHHHHHH
Q 027085 80 SMSDF----------HPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNC------KNPAFRKL 143 (228)
Q Consensus 80 ~~L~~----------~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~------~~~~f~~~ 143 (228)
++|+. ..+.|+|+++|++||++|++||.+||++++ +|.+++. +|++ |+++|.++
T Consensus 94 siL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p-~n~~aa~---------~~~~~~~~~~~~~~y~~~ 163 (183)
T 3rz3_A 94 SILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSP-ANVDASV---------MYRKWKESKGKDREYTDI 163 (183)
T ss_dssp TTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSC-SSHHHHH---------HHHHHHHTTTCCCHHHHH
T ss_pred hhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHhcccccccHHHHHHH
Confidence 99952 127899999999999999999999999998 6666664 5655 78999999
Q ss_pred HHHHHHHHHhhhh
Q 027085 144 FPEYVEKYNEQQL 156 (228)
Q Consensus 144 ar~~v~k~a~~~~ 156 (228)
+|++|++++....
T Consensus 164 v~~~v~~s~~~~~ 176 (183)
T 3rz3_A 164 IRKQVLGTKVDAE 176 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988653
No 29
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.1e-37 Score=265.35 Aligned_cols=139 Identities=22% Similarity=0.453 Sum_probs=127.0
Q ss_pred ccchhhhhCCCCCEEEeeCCC-CceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecC-CCeEe
Q 027085 3 NGCFYHVQEPVSHVVARPSPN-DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT-QKKLC 78 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~-dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~-~G~iC 78 (228)
++.-.+++++++||++.+.++ ++++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+. +|.||
T Consensus 9 kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~IC 88 (215)
T 1tte_A 9 KEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAIC 88 (215)
T ss_dssp HHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCC
T ss_pred HHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEE
Confidence 345567889999999999776 56799999999999999999999999999999999999999996 677888 99999
Q ss_pred ccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhh
Q 027085 79 LSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 154 (228)
Q Consensus 79 l~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~ 154 (228)
+++|+ +.|+|+++|.+||.+|++||.+|+|++| .+.++|. +|++|++.|.++||+|+++||..
T Consensus 89 L~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~~P-ln~eaa~---------~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 89 LDILR---NAWSPVITLKSALISLQALLQSPEPNDP-QDAEVAQ---------HYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSTTT---CCSCTTCCHHHHHHHHHHHHTSCCCSSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CccCC---CCCCCcCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHHHhccC
Confidence 99998 8999999999999999999999999997 6666654 89999999999999999999974
No 30
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-37 Score=253.54 Aligned_cols=136 Identities=23% Similarity=0.439 Sum_probs=122.9
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Ccee-cCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRF-MTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v-~~~G~iCl 79 (228)
++.-.+++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+|| +.+|.||+
T Consensus 30 kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL 109 (169)
T 1yrv_A 30 RDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCI 109 (169)
T ss_dssp HHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCC
T ss_pred HHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEee
Confidence 34556788899999999999999999999999999999999999999999999999999999996 5667 89999999
Q ss_pred cCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Q 027085 80 SMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEK 150 (228)
Q Consensus 80 ~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k 150 (228)
++|+ ++++|+|+++|.+||.+|++||.+|+++++ +|.++|+ +|++|++.|.++ +++|++
T Consensus 110 ~iL~-~~~~WsP~~ti~~vL~sI~sll~~Pn~~~P-ln~eaa~---------l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 110 DFLD-NPEKWNTNYTLSSILLALQVMLSNPVLENP-VNLEAAR---------ILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp HHHH-CGGGCCTTCCHHHHHHHHHHHHTSCCTTSC-SCHHHHH---------HHHSCHHHHHHH-HHHHC-
T ss_pred hhhc-CCcCCCCcCCHHHHHHHHHHHHhCCCCCCc-hhHHHHH---------HHHHCHHHHHHH-HHHhhC
Confidence 9996 347999999999999999999999999998 6766665 899999999998 888864
No 31
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=3.9e-37 Score=249.45 Aligned_cols=140 Identities=21% Similarity=0.466 Sum_probs=123.5
Q ss_pred ccchhhhhCCCCCEEEee-CCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARP-SPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p-~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
++.-.+++++++|+++.+ +++|+++|+++|. |+||||+||+|+|+|.||++||++||+|+|.|| |+||+.+|.||+
T Consensus 9 kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl 87 (154)
T 1c4z_D 9 KELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCL 87 (154)
T ss_dssp HHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCC
T ss_pred HHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEEC
Confidence 344567888999998654 7889999999998 999999999999999999999999999999997 677899999999
Q ss_pred cCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 80 SMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 80 ~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
++|+ +++|+|+++|.+||.+|++||.+|+++++ ++.++|+ +|++|++.|.++||+|+++||...
T Consensus 88 ~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 88 PVIS--AENWKPATKTDQVIQSLIALVNDPQPEHP-LRADLAE---------EYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp TTTS--SSSCCTTCCHHHHHHHHHHHHHSCCCSSC-SCHHHHH---------HHHTCSSTTHHHHHHHHTTC----
T ss_pred CCCC--CCCCCCCCcHHHHHHHHHHHHcCCCCCch-hhHHHHH---------HHHHhHHHHHHHHHHHHHHhcccC
Confidence 9995 37999999999999999999999999997 6666664 899999999999999999999754
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.3e-36 Score=264.42 Aligned_cols=139 Identities=17% Similarity=0.397 Sum_probs=126.7
Q ss_pred cchhhhhC---CCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCCeE
Q 027085 4 GCFYHVQE---PVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQKKL 77 (228)
Q Consensus 4 ~~~~l~~~---p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G~i 77 (228)
+.-.++++ ++.||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+ .+|.|
T Consensus 65 El~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~I 144 (253)
T 3e46_A 65 EFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 144 (253)
T ss_dssp HHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBB
T ss_pred HHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCee
Confidence 33445555 47899999999999999999999999999999999999999999999999999996 66688 48999
Q ss_pred eccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 78 CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 78 Cl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
|+++|+ ++|+|+++|.+||.+|+++|.+|+|++| +|.++|+ +|++|++.|.++||+|+++||...
T Consensus 145 CL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~P-ln~eaa~---------l~~~d~~~f~~~ar~~t~~yA~~~ 209 (253)
T 3e46_A 145 CLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDP-QDAVVAN---------QYKQNPEMFKQTARLWAHVYAGAP 209 (253)
T ss_dssp CCGGGT---TCCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHHCCS
T ss_pred eccccc---CCCCCCCCHHHHHHHHHHHhcCCCCCCh-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhcccc
Confidence 999997 9999999999999999999999999998 7777665 899999999999999999999764
No 33
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.9e-37 Score=249.90 Aligned_cols=129 Identities=18% Similarity=0.473 Sum_probs=119.2
Q ss_pred CCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCCeEeccCCCCCCCCCC
Q 027085 14 SHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQKKLCLSMSDFHPESWN 90 (228)
Q Consensus 14 ~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G~iCl~~L~~~~~~W~ 90 (228)
.|+++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+ .+|.||+++|+ ++|+
T Consensus 17 ~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~---~~W~ 93 (152)
T 2onu_A 17 AGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVIN---QTWT 93 (152)
T ss_dssp HTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHH---HHCC
T ss_pred CCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEeccccc---ccCC
Confidence 378899999999999999999999999999999999999999999999999996 66788 48999999997 8999
Q ss_pred CCcchHHHHHh-hhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhh
Q 027085 91 PMWSVSSILTG-LLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQ 155 (228)
Q Consensus 91 p~~~i~~vL~~-i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~ 155 (228)
|+++|.+||.+ |++||.+|+++++ ++.++|+ +|.+|++.|.++||+|+++||...
T Consensus 94 p~~~i~~vl~~ii~~Ll~~Pn~~~P-~n~~aa~---------~~~~d~~~y~~~v~~~~~~~a~~~ 149 (152)
T 2onu_A 94 PLYSLVNVFEVFLPQLLTYPNPSDP-LNSDAAS---------LLMKDKNIYEEKVKEYVKLYASKD 149 (152)
T ss_dssp TTCCHHHHHHTHHHHHHHSCCCSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHSCGG
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhccCc
Confidence 99999999999 6899999999998 6666664 899999999999999999999754
No 34
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.6e-36 Score=250.16 Aligned_cols=135 Identities=21% Similarity=0.472 Sum_probs=97.9
Q ss_pred ccchhhhhCCCCCEEEeeCC-CCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSP-NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~-~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl 79 (228)
++.-.+++++++||++.+.+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|| |+||+.+|+||+
T Consensus 24 kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~ICl 103 (172)
T 2awf_A 24 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCI 103 (172)
T ss_dssp HHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCC
T ss_pred HHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEeh
Confidence 34556788999999999865 799999999999999999999999999999999999999999996 677899999999
Q ss_pred cCCCC----------CCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChH-HHHHHHHHH
Q 027085 80 SMSDF----------HPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNP-AFRKLFPEY 147 (228)
Q Consensus 80 ~~L~~----------~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~-~f~~~ar~~ 147 (228)
++|+. ..+.|+|+++|.+||++|++||.+|+++++ +|.++|+ +|++|++ .|.++||+|
T Consensus 104 siL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p-~n~~aa~---------~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 104 SILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSP-ANVDAAK---------EWREDRNGEFKRKVARC 172 (172)
T ss_dssp GGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC---------------------------------------
T ss_pred hhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCc-cCHHHHH---------HHHHCcHHHHHHHHHhC
Confidence 99962 236899999999999999999999999998 6777765 8999999 999999875
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=8.4e-36 Score=245.87 Aligned_cols=127 Identities=17% Similarity=0.511 Sum_probs=117.0
Q ss_pred CEEEee-CCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecC-C--Cceec-CCCeEeccCCCCCCCCC
Q 027085 15 HVVARP-SPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT-P--NGRFM-TQKKLCLSMSDFHPESW 89 (228)
Q Consensus 15 gi~v~p-~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~t-P--n~~v~-~~G~iCl~~L~~~~~~W 89 (228)
++.+.+ +++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.| + |+||+ .+|.||+++|+ +++|
T Consensus 36 ~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~--~~~W 113 (172)
T 2y9m_A 36 IESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILK--PEEW 113 (172)
T ss_dssp EEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGS--TTTC
T ss_pred eEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccC--CCCC
Confidence 577888 8899999999999999999999999999999999999999999999 5 56674 78999999995 4799
Q ss_pred CCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHHh
Q 027085 90 NPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNC-KNPAFRKLFPEYVEKYNE 153 (228)
Q Consensus 90 ~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~-~~~~f~~~ar~~v~k~a~ 153 (228)
+|+++|.+||.+|++||.+|+++++ ++.++|+ +|++ |++.|.++||+|+++|+.
T Consensus 114 ~p~~~i~~vL~si~~ll~~p~~~~p-~n~~aa~---------~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 114 TPVWDLLHCVHAVWRLLREPVCDSP-LDVDIGN---------IIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp CTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHTTTCHHHHHHHHHHHHHHHHC
T ss_pred CCcCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998 7777665 8999 999999999999999875
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.4e-36 Score=243.23 Aligned_cols=126 Identities=19% Similarity=0.401 Sum_probs=117.4
Q ss_pred CCCCCEEEe-eCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEeccCCCCCCC
Q 027085 11 EPVSHVVAR-PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLSMSDFHPE 87 (228)
Q Consensus 11 ~p~~gi~v~-p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~~L~~~~~ 87 (228)
++++||++. ++++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||+++|+ +
T Consensus 19 ~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~---~ 94 (160)
T 1y8x_A 19 NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR---E 94 (160)
T ss_dssp CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGT---T
T ss_pred CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccch---h
Confidence 478899998 8899999999998 9999999999999999999999999999999996 6778999999999998 8
Q ss_pred CCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Q 027085 88 SWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEK 150 (228)
Q Consensus 88 ~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k 150 (228)
+|+|+++|.+||.+|+++|.+|+++++ ++.++|+ +|++|++.|.++||++++.
T Consensus 95 ~W~p~~~i~~vL~~i~~ll~~Pn~~~p-~n~~aa~---------~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 95 DWKPVLTINSIIYGLQYLFLEPNPEDP-LNKEAAE---------VLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TCCTTCCHHHHHHHHHHHHHSCCCSSC-SCHHHHH---------HHHSCHHHHHHHHHHHHHS
T ss_pred hccCCCCHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999998 6666665 8999999999999999875
No 37
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=251.64 Aligned_cols=130 Identities=19% Similarity=0.495 Sum_probs=119.6
Q ss_pred CCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecC-CCeEeccCCCCCCCCCC
Q 027085 14 SHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT-QKKLCLSMSDFHPESWN 90 (228)
Q Consensus 14 ~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~-~G~iCl~~L~~~~~~W~ 90 (228)
+||++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ |+||+. +|.||+++|+ ++|+
T Consensus 40 ~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~---~~Ws 115 (179)
T 2z5d_A 40 SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVIN---QTWT 115 (179)
T ss_dssp SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHH---HHCC
T ss_pred CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEeccccc---cCCC
Confidence 58888887 679999999999999999999999999999999999999999995 566888 9999999997 8999
Q ss_pred CCcchHHHHHh-hhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhhh
Q 027085 91 PMWSVSSILTG-LLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLA 157 (228)
Q Consensus 91 p~~~i~~vL~~-i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~~ 157 (228)
|+++|.+||.+ |++||.+|+++++ ++.++|+ +|++|++.|.++||+|+++||.....
T Consensus 116 P~~ti~~iL~s~I~~Ll~~Pn~~~p-~n~eaa~---------~~~~d~~~y~~~vr~~~~~~a~~~~~ 173 (179)
T 2z5d_A 116 ALYDLTNIFESFLPQLLAYPNPIDP-LNGDAAA---------MYLHRPEEYKQKIKEYIQKYATEEAL 173 (179)
T ss_dssp TTCCTTHHHHTHHHHHHHSCCCSSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHHHHcccchh
Confidence 99999999999 9999999999998 6766665 89999999999999999999986543
No 38
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.3e-35 Score=273.18 Aligned_cols=141 Identities=21% Similarity=0.541 Sum_probs=131.0
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEecc
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLS 80 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~ 80 (228)
++.-.+++++++||++.|.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||++
T Consensus 10 kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~ 89 (399)
T 4ddg_A 10 KELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLD 89 (399)
T ss_dssp HHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCG
T ss_pred HHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCc
Confidence 45556889999999999999999999999999999999999999999999999999999999997 7789999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQL 156 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~ 156 (228)
+|+ ++|+|+++|++||.+|+++|.+|+|++| +|.++|+ +|++|++.|.++||+||++|+....
T Consensus 90 il~---~~W~p~~~i~~vL~~i~~ll~~pnp~~p-~n~~aa~---------~~~~d~~~y~~~~~~~~~~~a~~~v 152 (399)
T 4ddg_A 90 ILR---SQWSPALTISKVLLSICSLLCDPNPDDP-LVPEIAR---------IYKTDREKYNRIAREWTQKYAMGGS 152 (399)
T ss_dssp GGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHTSCTT
T ss_pred ccc---cCCCccccHHHHHHHHHHHHcCCCCCch-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhhcccc
Confidence 997 9999999999999999999999999998 7776665 8999999999999999999986533
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=6e-36 Score=246.58 Aligned_cols=140 Identities=19% Similarity=0.432 Sum_probs=122.9
Q ss_pred cchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCCeEecc
Q 027085 4 GCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQKKLCLS 80 (228)
Q Consensus 4 ~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G~iCl~ 80 (228)
+.-.+++++. ++ +.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+ .+|.||++
T Consensus 20 El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~ 95 (171)
T 1yf9_A 20 DYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLD 95 (171)
T ss_dssp HHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHH
T ss_pred HHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecc
Confidence 4445667663 44 358899999999999999999999999999999999999999999996 67788 59999999
Q ss_pred CCCCCCCCCCCCcchHHHHHhh-hccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhhhhh
Q 027085 81 MSDFHPESWNPMWSVSSILTGL-LSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLAEQ 159 (228)
Q Consensus 81 ~L~~~~~~W~p~~~i~~vL~~i-~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~a~~~~~~~ 159 (228)
+|+ ++|+|+++|.+||.+| ++||.+|+++++ ++.++|+ +|.+|++.|.++||+|+++|+......+
T Consensus 96 iL~---~~W~p~~~i~~vL~sil~~ll~~Pn~~~p-~n~~aa~---------~~~~d~~~y~~~vr~~~~~~a~~~~~~~ 162 (171)
T 1yf9_A 96 VIN---QTWTPMYQLENIFDVFLPQLLRYPNPSDP-LNVQAAH---------LLHADRVGFDALLREHVSTHATPQKALE 162 (171)
T ss_dssp HHH---HHCCTTCCTHHHHHTHHHHHHHSCCSSCC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ccc---cCCCCCCcHHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHHcChhhHhc
Confidence 997 8999999999999997 799999999998 6666664 8999999999999999999998766544
Q ss_pred h
Q 027085 160 R 160 (228)
Q Consensus 160 ~ 160 (228)
.
T Consensus 163 ~ 163 (171)
T 1yf9_A 163 S 163 (171)
T ss_dssp T
T ss_pred C
Confidence 3
No 40
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-35 Score=245.71 Aligned_cols=127 Identities=18% Similarity=0.359 Sum_probs=118.1
Q ss_pred CCCCCEEEe-eCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEeccCCCCCCC
Q 027085 11 EPVSHVVAR-PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLSMSDFHPE 87 (228)
Q Consensus 11 ~p~~gi~v~-p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~~L~~~~~ 87 (228)
++++||++. ++++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||+++|+ +
T Consensus 39 ~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~---~ 114 (180)
T 2nvu_C 39 NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILR---E 114 (180)
T ss_dssp CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGT---T
T ss_pred CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEccccc---c
Confidence 478899998 8899999999998 9999999999999999999999999999999996 7778999999999998 8
Q ss_pred CCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 027085 88 SWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 151 (228)
Q Consensus 88 ~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~ 151 (228)
+|+|+++|.+||.+|+++|.+|+++++ ++.++|. +|.+|++.|.++||++++..
T Consensus 115 ~W~p~~~i~~vL~si~~ll~~Pn~~~p-~n~~aa~---------~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 115 DWKPVLTINSIIYGLQYLFLEPNPEDP-LNKEAAE---------VLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp SCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHSE
T ss_pred cCCCCCCHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999998 6666665 89999999999999998753
No 41
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=5.4e-34 Score=238.54 Aligned_cols=126 Identities=18% Similarity=0.361 Sum_probs=117.5
Q ss_pred CCCCEEEe----eCCCCce---EEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEeccCC
Q 027085 12 PVSHVVAR----PSPNDIL---EWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLSMS 82 (228)
Q Consensus 12 p~~gi~v~----p~~~dl~---~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~~L 82 (228)
+++||++. ++++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|.|| |+||+.+|.||+++|
T Consensus 43 ~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL 121 (190)
T 3o2u_A 43 LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNIL 121 (190)
T ss_dssp CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGG
T ss_pred CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhc
Confidence 67899998 8999999 9999997 788999999999999999999999999999997 777899999999999
Q ss_pred CCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 027085 83 DFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 151 (228)
Q Consensus 83 ~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar~~v~k~ 151 (228)
+ ++|+|+++|.+||.+|+++|.+|+|+++ +|.++|+ +|.+|++.|.++||+|++.+
T Consensus 122 ~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p-ln~~aa~---------~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 122 R---EDWSPALDLQSIITGLLFLFLEPNPNDP-LNKDAAK---------LLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp T---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHTCHHHHHHHHHHHHBTC
T ss_pred c---CCCCCCCCHHHHHHHHHHHHhCCCCCcc-hhHHHHH---------HHHHCHHHHHHHHHHHHHhc
Confidence 8 9999999999999999999999999998 7777765 89999999999999999654
No 42
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.98 E-value=6.7e-33 Score=217.43 Aligned_cols=108 Identities=24% Similarity=0.483 Sum_probs=96.5
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC---CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP---NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP---n~~v~~~G~iCl 79 (228)
++.-.+++++++||++.++++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|.|+ |+||+.+|+||+
T Consensus 13 kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl 92 (125)
T 2fo3_A 13 KELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICL 92 (125)
T ss_dssp HHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCC
T ss_pred HHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEc
Confidence 35556788999999999999999999999999999999999999999999999999999999995 577999999999
Q ss_pred cCCCCCCCCCCCCcchHHHHHhhhccccCCCCCC
Q 027085 80 SMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTT 113 (228)
Q Consensus 80 ~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~ 113 (228)
++|+ ++|+|+++|.+||.+|++||.+|++..
T Consensus 93 ~iL~---~~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 93 SLLG---DDYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp GGGT---TTCCTTCCHHHHHHHHHHHHC------
T ss_pred hhcC---CCCCCCCcHHHHHHHHHHHHhCccccc
Confidence 9997 899999999999999999999987643
No 43
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=3.4e-32 Score=216.41 Aligned_cols=106 Identities=24% Similarity=0.471 Sum_probs=98.9
Q ss_pred ccchhhhhCCCCCEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC---CceecCCCeEec
Q 027085 3 NGCFYHVQEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP---NGRFMTQKKLCL 79 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP---n~~v~~~G~iCl 79 (228)
++.-.+++++++||++.++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+.+|+||+
T Consensus 27 kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl 106 (136)
T 2h2y_A 27 KELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICL 106 (136)
T ss_dssp HHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCC
T ss_pred HHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEC
Confidence 34556788999999999999999999999999999999999999999999999999999999995 678999999999
Q ss_pred cCCCCCCCCCCCCcchHHHHHhhhccccCCCC
Q 027085 80 SMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 111 (228)
Q Consensus 80 ~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p 111 (228)
++|+ ++|+|+++|.+||.+|++||.+|+.
T Consensus 107 ~iL~---~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 107 SVLG---DDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp GGGT---TTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred cccc---CCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9997 8999999999999999999998753
No 44
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.97 E-value=1e-32 Score=226.30 Aligned_cols=120 Identities=18% Similarity=0.351 Sum_probs=108.7
Q ss_pred CCCEEEeeCCCCceEEEEEEEcCCCCCCC--CcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCeEeccCCCCCCCC
Q 027085 13 VSHVVARPSPNDILEWHYVLEGSNGTPFA--GGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKKLCLSMSDFHPES 88 (228)
Q Consensus 13 ~~gi~v~p~~~dl~~w~~~I~Gp~~TpYe--gG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~iCl~~L~~~~~~ 88 (228)
+.||++.++++|+++|+++|.||+||||+ ||+|+++|.||++||++||+|+|.|| |+||+.+|.||+++|+ ++
T Consensus 37 ~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~---~~ 113 (167)
T 4ds2_A 37 HSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVN---DF 113 (167)
T ss_dssp SSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHH---TT
T ss_pred CCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCc---CC
Confidence 78999999999999999999999999999 99999999999999999999999997 7778999999999997 99
Q ss_pred CCCCcchHHHHH-hhhccccC--CCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 027085 89 WNPMWSVSSILT-GLLSFMMD--TSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 145 (228)
Q Consensus 89 W~p~~~i~~vL~-~i~~ll~~--p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar 145 (228)
|+|++++.++|+ .|++|+.+ |+++++ +|.++|+ +|++|++.|.++||
T Consensus 114 W~p~~~i~~vll~~l~~l~~~~~pn~~~p-~n~eaa~---------l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 114 WTPDQHASDVIKLVLDRVFSQYKSRRDDD-VNPEARH---------YLEKFPQDFAARVR 163 (167)
T ss_dssp CCTTSCHHHHHHHHHHHHHTSTTSCCSCC-CCHHHHH---------HHHHCHHHHHHHHT
T ss_pred CCCCCChHHHHHHHHHHHHhcCCCCCcch-HhHHHHH---------HHHHCHHHHHHHHh
Confidence 999999999754 57777765 688887 6666665 89999999999987
No 45
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=8.9e-32 Score=240.49 Aligned_cols=143 Identities=20% Similarity=0.305 Sum_probs=120.2
Q ss_pred cchhhhhCCCC----CEEEeeCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC-------Cceec
Q 027085 4 GCFYHVQEPVS----HVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP-------NGRFM 72 (228)
Q Consensus 4 ~~~~l~~~p~~----gi~v~p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP-------n~~v~ 72 (228)
+.-.+++++++ ++++.++++|+++|+++|.||.||||+||+|+|+|.||++||++||+|+|.|+ |+||+
T Consensus 84 El~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~ 163 (323)
T 3ceg_A 84 EAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLY 163 (323)
T ss_dssp HHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBC
T ss_pred HHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCC
Confidence 44456777776 46678899999999999999999999999999999999999999999999997 67899
Q ss_pred CCCeEeccCCCC-C---CCCCCCCc-chHHHHHhhhcccc--CCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 027085 73 TQKKLCLSMSDF-H---PESWNPMW-SVSSILTGLLSFMM--DTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 145 (228)
Q Consensus 73 ~~G~iCl~~L~~-~---~~~W~p~~-~i~~vL~~i~~ll~--~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar 145 (228)
.+|.||+++|+. + .+.|+|++ +|.+||++|++||. +|++++| .+..++. +.+|.+|++.|.++||
T Consensus 164 ~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP-~~~~a~a-------~~~~~~d~~~Y~~~vr 235 (323)
T 3ceg_A 164 NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEP-GYERSRG-------TPSGTQSSREYDGNIR 235 (323)
T ss_dssp TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGST-TGGGGTT-------SHHHHHHHHHHHHHHH
T ss_pred cCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCc-cCHHHHH-------hhhhhhhHHHHHHHHH
Confidence 999999999962 1 26999999 89999999999997 5555776 3332210 1268889999999999
Q ss_pred HHHHHHHhh
Q 027085 146 EYVEKYNEQ 154 (228)
Q Consensus 146 ~~v~k~a~~ 154 (228)
+|+++|+..
T Consensus 236 ~~t~k~A~~ 244 (323)
T 3ceg_A 236 QATVKWAML 244 (323)
T ss_dssp HHHHHHTTH
T ss_pred HHHHHHhhH
Confidence 999999865
No 46
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.97 E-value=8.8e-32 Score=218.65 Aligned_cols=115 Identities=18% Similarity=0.250 Sum_probs=102.0
Q ss_pred ccchhhhhC-CCCCEEEeeCC-C--CceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCCCe
Q 027085 3 NGCFYHVQE-PVSHVVARPSP-N--DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQKK 76 (228)
Q Consensus 3 ~~~~~l~~~-p~~gi~v~p~~-~--dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~G~ 76 (228)
++.-.++++ +++||++.+.. + |+++|+++|.||++||||||+|+++|.||++||++||+|+|.|+ |+||+.+|+
T Consensus 28 kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~ 107 (156)
T 2q0v_A 28 DELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGR 107 (156)
T ss_dssp HHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSB
T ss_pred HHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCe
Confidence 344567777 88999998853 3 59999999999999999999999999999999999999999996 667899999
Q ss_pred E---eccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHH
Q 027085 77 L---CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEE 122 (228)
Q Consensus 77 i---Cl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~ 122 (228)
| |+++|+ +|+|+++|++||.+|++||.+|+++++ ++.++|+
T Consensus 108 icisCL~iL~----~WsP~~ti~~vL~sI~~ll~~Pn~~~p-~n~~aa~ 151 (156)
T 2q0v_A 108 VIKNNLHILK----NWNRNYTIETILISLRQEMLSSANKRL-PQPNEGE 151 (156)
T ss_dssp BCGGGSHHHH----TCCTTCCHHHHHHHHHHHTTSTTTTTC-CCCCTTC
T ss_pred Eehhhccccc----CCCCcCcHHHHHHHHHHHHhCCCCCCc-CChHHHH
Confidence 9 888885 599999999999999999999999998 6776664
No 47
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=2.2e-31 Score=211.77 Aligned_cols=102 Identities=24% Similarity=0.519 Sum_probs=94.8
Q ss_pred ccchhhhhCCCCCEEEe--eCCCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC----CceecCCCe
Q 027085 3 NGCFYHVQEPVSHVVAR--PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP----NGRFMTQKK 76 (228)
Q Consensus 3 ~~~~~l~~~p~~gi~v~--p~~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP----n~~v~~~G~ 76 (228)
++.-.+++++++||++. ++++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|.|| |+||+.+|+
T Consensus 29 kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ 108 (136)
T 2a7l_A 29 KELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGH 108 (136)
T ss_dssp HHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCB
T ss_pred HHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCe
Confidence 35556788999999965 889999999999999999999999999999999999999999999995 678999999
Q ss_pred EeccCCCCCCCCCCCCcchHHHHHhhhcccc
Q 027085 77 LCLSMSDFHPESWNPMWSVSSILTGLLSFMM 107 (228)
Q Consensus 77 iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~ 107 (228)
||+++|+ ++|+|+++|++||.+|++||.
T Consensus 109 ICL~iL~---~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 109 ICLSILT---EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BCCGGGT---TTCCTTSCHHHHHHHHHHHTC
T ss_pred EEchhcC---CCCCCCCcHHHHHHHHHHHhC
Confidence 9999998 999999999999999999884
No 48
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.97 E-value=3.7e-31 Score=215.76 Aligned_cols=117 Identities=17% Similarity=0.212 Sum_probs=101.3
Q ss_pred ccchhhhhCCCCC-EEEee-CCCC--ceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCC
Q 027085 3 NGCFYHVQEPVSH-VVARP-SPND--ILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQK 75 (228)
Q Consensus 3 ~~~~~l~~~p~~g-i~v~p-~~~d--l~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G 75 (228)
++.-.+++++++| +.+.+ +++| +++|+++|.||+|||||||+|+++|.||++||++||+|+|.|| |+||+ .+|
T Consensus 32 kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G 111 (160)
T 2a4d_A 32 EELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNG 111 (160)
T ss_dssp HHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTC
T ss_pred HHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCC
Confidence 3455678888888 77877 4555 9999999999999999999999999999999999999999996 66787 699
Q ss_pred eEeccCCCCCCCCCCCCcchHHHHHhhhcccc-CCCCCCCCCCChHH
Q 027085 76 KLCLSMSDFHPESWNPMWSVSSILTGLLSFMM-DTSPTTGSVNTTTE 121 (228)
Q Consensus 76 ~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~-~p~p~~~~~~~~~a 121 (228)
+||+++|+.. ++|+|+++|++||++|++||. +||++++ .+.++|
T Consensus 112 ~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P-~n~eaa 156 (160)
T 2a4d_A 112 VVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLP-QPPEGQ 156 (160)
T ss_dssp BBCGGGSHHH-HTCCTTCCHHHHHHHHHHHHTSTTTTTCC-CCCTTC
T ss_pred EEehhhcCCc-cCCCccCcHHHHHHHHHHHHccCCCCCCC-CChhhc
Confidence 9999998633 689999999999999999995 6899998 555554
No 49
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.96 E-value=3.6e-31 Score=210.83 Aligned_cols=113 Identities=12% Similarity=0.178 Sum_probs=97.4
Q ss_pred cchhhhhC-CCCCEEEeeCC-C--CceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--CceecCC-Ce
Q 027085 4 GCFYHVQE-PVSHVVARPSP-N--DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQ-KK 76 (228)
Q Consensus 4 ~~~~l~~~-p~~gi~v~p~~-~--dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~~~-G~ 76 (228)
+.-.++++ +++||++.+.+ + |+++|+++|.||++||||||+|+++|.||++||++||+|+|.|+ |+||+.+ |.
T Consensus 14 El~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~ 93 (138)
T 1jat_B 14 ELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGE 93 (138)
T ss_dssp HHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCB
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCE
Confidence 44556777 78999998843 3 49999999999999999999999999999999999999999996 6678886 99
Q ss_pred E--eccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHH
Q 027085 77 L--CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTE 121 (228)
Q Consensus 77 i--Cl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a 121 (228)
| |+++|+ +|+|+++|++||.+|+++|.+|+++++ ++.++|
T Consensus 94 i~~cL~~l~----~W~p~~~i~~vl~~i~~ll~~pn~~~p-~~~~~~ 135 (138)
T 1jat_B 94 VQTDFHTLR----DWKRAYTMETLLLDLRKEMATPANKKL-RQPKEG 135 (138)
T ss_dssp BCTTSHHHH----TCCTTCCHHHHHHHHHHHHTSHHHHTS-CCCCTT
T ss_pred EeeecccCC----CCCCcCcHHHHHHHHHHHHcCCCCCCC-CCcchh
Confidence 9 999884 799999999999999999999999997 555554
No 50
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.96 E-value=8e-31 Score=215.74 Aligned_cols=117 Identities=17% Similarity=0.212 Sum_probs=100.9
Q ss_pred ccchhhhhCCCCC-EEEee-CCCC--ceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC--Cceec-CCC
Q 027085 3 NGCFYHVQEPVSH-VVARP-SPND--ILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM-TQK 75 (228)
Q Consensus 3 ~~~~~l~~~p~~g-i~v~p-~~~d--l~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP--n~~v~-~~G 75 (228)
++.-.+++++++| +.+.+ +++| +++|+++|.||+|||||||+|+++|.||++||++||+|+|.|+ |+||+ .+|
T Consensus 42 kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G 121 (170)
T 2hlw_A 42 EELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNG 121 (170)
T ss_dssp HHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSC
T ss_pred HHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCC
Confidence 3445677888888 67776 5554 9999999999999999999999999999999999999999997 67787 799
Q ss_pred eEeccCCCCCCCCCCCCcchHHHHHhhhcccc-CCCCCCCCCCChHH
Q 027085 76 KLCLSMSDFHPESWNPMWSVSSILTGLLSFMM-DTSPTTGSVNTTTE 121 (228)
Q Consensus 76 ~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~-~p~p~~~~~~~~~a 121 (228)
.||+++|+.. ++|+|+++|++||++|++||. .||++++ .+.++|
T Consensus 122 ~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P-~n~eaa 166 (170)
T 2hlw_A 122 VVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLP-QPPEGQ 166 (170)
T ss_dssp BBCTTTCHHH-HTCCSSCCHHHHHHHHHHHHHSTTTSSSC-CCSSCC
T ss_pred EEEhhhcCCC-CCCCccCcHHHHHHHHHHHHccCCCCCCC-CCcccc
Confidence 9999998633 689999999999999999997 5899997 555544
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.96 E-value=2e-30 Score=216.21 Aligned_cols=129 Identities=13% Similarity=0.330 Sum_probs=109.0
Q ss_pred cchhhhhCC---CCCEEEeeCCCCceEEEEEEEcC-CCCCCCC-----------cEEEEEEEcCCCCCCCCCceeecCCC
Q 027085 4 GCFYHVQEP---VSHVVARPSPNDILEWHYVLEGS-NGTPFAG-----------GYYYGKIKFPPEYPYKPPGILMITPN 68 (228)
Q Consensus 4 ~~~~l~~~p---~~gi~v~p~~~dl~~w~~~I~Gp-~~TpYeg-----------G~f~~~i~fp~~YP~~pP~v~F~tPn 68 (228)
+.-.+++++ +.||++.+.++|+++|+++|.|| ++|||+| |+|+|+|.||++||++||+|+|.||+
T Consensus 35 El~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi 114 (186)
T 1zuo_A 35 ELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPV 114 (186)
T ss_dssp HHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESC
T ss_pred HHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCc
Confidence 445567777 68999999999999999999998 9999998 89999999999999999999999984
Q ss_pred --c-eecCCCeEeccCCCCCCCCCCCCcchHHHHHhhhccccCCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 027085 69 --G-RFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 145 (228)
Q Consensus 69 --~-~v~~~G~iCl~~L~~~~~~W~p~~~i~~vL~~i~~ll~~p~p~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~ar 145 (228)
+ ||+.+|.||+++|+ +++|+|+++|++||++|++||.+|++.. .|..++..|.+.++
T Consensus 115 ~hPnnV~~~G~ICL~iL~--~~~WsP~~ti~~VL~sI~slL~~p~a~~------------------~~~~~~~~Y~~~~~ 174 (186)
T 1zuo_A 115 LSGGYVLGGGALCMELLT--KQGWSSAYSIESVIMQINATLVKGKARV------------------QFGANKNQYNLARA 174 (186)
T ss_dssp EESTTBCGGGBBCCGGGS--TTTCCTTSCHHHHHHHHHHHHHHTTCEE------------------CTTCCTTCCCHHHH
T ss_pred cCCCccCCCCcEEeccCC--CCCCCCcCcHHHHHHHHHHHHcCCChhH------------------hhccCHHHHhHHHH
Confidence 4 48889999999995 3799999999999999999999986644 34445566666666
Q ss_pred HHHHHHH
Q 027085 146 EYVEKYN 152 (228)
Q Consensus 146 ~~v~k~a 152 (228)
+.+.+..
T Consensus 175 ~~~~~~~ 181 (186)
T 1zuo_A 175 QQSYNSI 181 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.78 E-value=1e-20 Score=153.53 Aligned_cols=81 Identities=17% Similarity=0.335 Sum_probs=72.5
Q ss_pred EeeCCCCceEEEEEEEcCCCCCCCCc----------EEEEEEEcCCCCCCCCCceeecCC---CceecCCCeEeccCCCC
Q 027085 18 ARPSPNDILEWHYVLEGSNGTPFAGG----------YYYGKIKFPPEYPYKPPGILMITP---NGRFMTQKKLCLSMSDF 84 (228)
Q Consensus 18 v~p~~~dl~~w~~~I~Gp~~TpYegG----------~f~~~i~fp~~YP~~pP~v~F~tP---n~~v~~~G~iCl~~L~~ 84 (228)
+.+..+|+++|.++|.||+||+|+|| .|+++|.||++||++||+|+|.++ |++++.+|+|||++|.
T Consensus 48 v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~- 126 (172)
T 2z6o_A 48 VENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHF- 126 (172)
T ss_dssp HHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTH-
T ss_pred hccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhc-
Confidence 56677899999999999999999999 999999999999999999999885 7779999999999983
Q ss_pred CCC---CCCCCcchHHHHH
Q 027085 85 HPE---SWNPMWSVSSILT 100 (228)
Q Consensus 85 ~~~---~W~p~~~i~~vL~ 100 (228)
.. .|+|.++|.++|.
T Consensus 127 -kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 127 -KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp -HHHHHHHTTSCCHHHHHH
T ss_pred -cccccccCCccCHHHHHh
Confidence 13 4559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.63 E-value=2.9e-16 Score=127.73 Aligned_cols=91 Identities=16% Similarity=0.258 Sum_probs=78.3
Q ss_pred eeCCCCceEEEEEEEcCCCCCCCCcE---EEEEEEcCCCCCCCCCceeecCC-------------CceecCCCeEeccCC
Q 027085 19 RPSPNDILEWHYVLEGSNGTPFAGGY---YYGKIKFPPEYPYKPPGILMITP-------------NGRFMTQKKLCLSMS 82 (228)
Q Consensus 19 ~p~~~dl~~w~~~I~Gp~~TpYegG~---f~~~i~fp~~YP~~pP~v~F~tP-------------n~~v~~~G~iCl~~L 82 (228)
...+|...++-+.+.|...++|+||. |.+.|.||++||++||.|.|.++ |.||+.+|+||+++|
T Consensus 54 yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL 133 (162)
T 3r3q_A 54 FTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPIL 133 (162)
T ss_dssp EECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGG
T ss_pred EEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCccc
Confidence 34566677777777777779999999 88999999999999999977541 678999999999999
Q ss_pred CCCCCCCCC-CcchHHHHHhhhccccCCCCCC
Q 027085 83 DFHPESWNP-MWSVSSILTGLLSFMMDTSPTT 113 (228)
Q Consensus 83 ~~~~~~W~p-~~~i~~vL~~i~~ll~~p~p~~ 113 (228)
+ +|+| +.+|.++|.+|+++|.+|+|+.
T Consensus 134 ~----~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 134 H----AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp G----SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred c----cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 4 6999 7899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.37 E-value=9.8e-14 Score=110.41 Aligned_cols=65 Identities=22% Similarity=0.526 Sum_probs=56.8
Q ss_pred CceEEEEEEEcCCCCCCCCc----------EEEEEEEcCCCCCCCCCceeecCC---CceecCCCeEeccCCCCCCCCCC
Q 027085 24 DILEWHYVLEGSNGTPFAGG----------YYYGKIKFPPEYPYKPPGILMITP---NGRFMTQKKLCLSMSDFHPESWN 90 (228)
Q Consensus 24 dl~~w~~~I~Gp~~TpYegG----------~f~~~i~fp~~YP~~pP~v~F~tP---n~~v~~~G~iCl~~L~~~~~~W~ 90 (228)
+-.+|...+.||+||+|.|+ .|++++.||.+||..||.|+|.+. +.+++.+|+|||+++ |+
T Consensus 56 ~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh------wk 129 (168)
T 3kpa_A 56 SDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH------FF 129 (168)
T ss_dssp TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT------HH
T ss_pred ccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc------cc
Confidence 44579999999999999999 999999999999999999999983 456899999999863 77
Q ss_pred CCcc
Q 027085 91 PMWS 94 (228)
Q Consensus 91 p~~~ 94 (228)
|.|+
T Consensus 130 PlW~ 133 (168)
T 3kpa_A 130 PLWA 133 (168)
T ss_dssp HHHH
T ss_pred hhhH
Confidence 6654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.29 E-value=1.8e-12 Score=103.61 Aligned_cols=79 Identities=16% Similarity=0.394 Sum_probs=69.8
Q ss_pred CCCceEEEEEEEcCCCCCCCCcEEEE--EEEcCCCCCCCCCceeecCC--------CceecCCCeEeccCCCCCCCCCCC
Q 027085 22 PNDILEWHYVLEGSNGTPFAGGYYYG--KIKFPPEYPYKPPGILMITP--------NGRFMTQKKLCLSMSDFHPESWNP 91 (228)
Q Consensus 22 ~~dl~~w~~~I~Gp~~TpYegG~f~~--~i~fp~~YP~~pP~v~F~tP--------n~~v~~~G~iCl~~L~~~~~~W~p 91 (228)
..+++.|.++|. .+|+|+.|.+ .|.||++||++||.| |.+| |.+||.+|+||++.|+ +|++
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~----~W~~ 120 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH----EWKH 120 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH----TCCT
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc----ccCC
Confidence 468999999999 6899999985 899999999999999 6653 6789999999999995 5988
Q ss_pred -CcchHHHHHhhhccccCC
Q 027085 92 -MWSVSSILTGLLSFMMDT 109 (228)
Q Consensus 92 -~~~i~~vL~~i~~ll~~p 109 (228)
..+|.+++..++++|.+.
T Consensus 121 ~~snL~~ll~~l~~~F~~e 139 (146)
T 3obq_A 121 PQSDLLGLIQVMIVVFGDE 139 (146)
T ss_dssp TTCCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHhhC
Confidence 899999999999998764
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.98 E-value=0.24 Score=37.26 Aligned_cols=41 Identities=12% Similarity=0.153 Sum_probs=27.0
Q ss_pred eEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecC
Q 027085 26 LEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 66 (228)
Q Consensus 26 ~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~t 66 (228)
..+.+.|..-.+..-+.-.+.+.|.||++||..||.|...+
T Consensus 38 ~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 38 PSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45555554222222223468899999999999999987543
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=89.83 E-value=0.59 Score=35.03 Aligned_cols=42 Identities=19% Similarity=0.190 Sum_probs=27.7
Q ss_pred ceEEEEEEEcCCCCCCC--CcEEEEEEEcCCCCCCCCCceeecC
Q 027085 25 ILEWHYVLEGSNGTPFA--GGYYYGKIKFPPEYPYKPPGILMIT 66 (228)
Q Consensus 25 l~~w~~~I~Gp~~TpYe--gG~f~~~i~fp~~YP~~pP~v~F~t 66 (228)
...+.+.|..+.+..-+ .-.+.+.|.+|++||..+|.|...+
T Consensus 39 ~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 39 PWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred CeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 44555556533221111 2368899999999999999988665
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=89.80 E-value=0.7 Score=35.15 Aligned_cols=41 Identities=17% Similarity=0.270 Sum_probs=28.3
Q ss_pred ceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecC
Q 027085 25 ILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 66 (228)
Q Consensus 25 l~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~t 66 (228)
...+.+.|.+..+ .-..-.+.+.|.+|++||..+|.|...+
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 4556666764322 1112468899999999999999988654
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.03 E-value=0.97 Score=33.91 Aligned_cols=41 Identities=17% Similarity=0.056 Sum_probs=27.7
Q ss_pred ceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecC
Q 027085 25 ILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 66 (228)
Q Consensus 25 l~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~t 66 (228)
...+.+.|...... =..-.+.+.|.+|++||..+|.|...+
T Consensus 39 ~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 39 GTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp CEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred CCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 45666667632210 012368999999999999999887554
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=84.36 E-value=0.56 Score=35.56 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=20.0
Q ss_pred cEEEEEEEcCCCCCCCCCceeec
Q 027085 43 GYYYGKIKFPPEYPYKPPGILMI 65 (228)
Q Consensus 43 G~f~~~i~fp~~YP~~pP~v~F~ 65 (228)
-.+.+.|.||++||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 36899999999999999998764
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=83.68 E-value=1.1 Score=34.95 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=20.2
Q ss_pred EEEEEEEcCCCCCCCCCceeecC
Q 027085 44 YYYGKIKFPPEYPYKPPGILMIT 66 (228)
Q Consensus 44 ~f~~~i~fp~~YP~~pP~v~F~t 66 (228)
.+.++|.+|++||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999887544
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=81.51 E-value=0.89 Score=35.31 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=20.3
Q ss_pred EEEEEEEcCCCCCCCCCceeecCC
Q 027085 44 YYYGKIKFPPEYPYKPPGILMITP 67 (228)
Q Consensus 44 ~f~~~i~fp~~YP~~pP~v~F~tP 67 (228)
.+.+.|.+|.+||..||.|....+
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999875543
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=81.46 E-value=7.5 Score=31.58 Aligned_cols=66 Identities=21% Similarity=0.271 Sum_probs=50.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCCCceecCCCeEeccCCCCCCCCCCCCcchHHHHHh
Q 027085 22 PNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTG 101 (228)
Q Consensus 22 ~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tPn~~v~~~G~iCl~~L~~~~~~W~p~~~i~~vL~~ 101 (228)
+.++...++.+..-. |....++|.++.+||.++|.+...-|.+- . -.|++..++.+++..
T Consensus 22 d~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~~~------------~---~~w~~~ssL~~v~~q 81 (186)
T 3zqs_A 22 DTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPVPF------------C---ASWTPQSSLISIYSQ 81 (186)
T ss_dssp CTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSSCC------------C---CCCCTTCCHHHHHHH
T ss_pred cCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCCCc------------c---cccCCCccHHHHHHH
Confidence 467888888888533 57789999999999999998766656521 1 479998888888876
Q ss_pred hhcccc
Q 027085 102 LLSFMM 107 (228)
Q Consensus 102 i~~ll~ 107 (228)
.+..+.
T Consensus 82 F~~~Le 87 (186)
T 3zqs_A 82 FLAAIE 87 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665553
No 64
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=33.71 E-value=51 Score=26.37 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=33.3
Q ss_pred CCCceEEEEEEEcCCCCCCCCcEEEEEEEcCCCCCCCCCceeecCC
Q 027085 22 PNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP 67 (228)
Q Consensus 22 ~~dl~~w~~~I~Gp~~TpYegG~f~~~i~fp~~YP~~pP~v~F~tP 67 (228)
++..++|.+.+.|+.|.-...-+=++...+.+.||. |.-.+..|
T Consensus 29 ~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 29 AEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 467899999999988754444566888889999974 66666664
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=30.65 E-value=35 Score=27.95 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=20.6
Q ss_pred CCCcEEEEEEEcCCCCCC-----CCCceeec
Q 027085 40 FAGGYYYGKIKFPPEYPY-----KPPGILMI 65 (228)
Q Consensus 40 YegG~f~~~i~fp~~YP~-----~pP~v~F~ 65 (228)
=+.|.|.|+-.+|--||. .||.|+|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 357999999999999997 56666554
No 66
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=26.95 E-value=13 Score=20.38 Aligned_cols=14 Identities=36% Similarity=0.987 Sum_probs=10.4
Q ss_pred CCchHHHHHHHHHH
Q 027085 204 SFPTWMLLLLVSIF 217 (228)
Q Consensus 204 ~~p~~~~~~~~~~~ 217 (228)
--|+||+-++..++
T Consensus 15 vtpdwmlplilgly 28 (29)
T 1cn3_F 15 VTPDWMLPLILGLY 28 (29)
T ss_dssp CEEGGGHHHHHHTT
T ss_pred cCchhhHHHHHhcc
Confidence 35899998877654
No 67
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=23.59 E-value=17 Score=26.89 Aligned_cols=24 Identities=4% Similarity=-0.201 Sum_probs=0.0
Q ss_pred HHhccChHHHHHHHHHHHHHHHhh
Q 027085 131 LAFNCKNPAFRKLFPEYVEKYNEQ 154 (228)
Q Consensus 131 ~~~~~~~~~f~~~ar~~v~k~a~~ 154 (228)
.+|.++++.|.++||.|+.-|+..
T Consensus 33 ~qy~~~~~~f~~TAr~WT~~~a~~ 56 (108)
T 2cwb_A 33 EKVFKQYANDNGVDGEWTYDDATK 56 (108)
T ss_dssp ------------------------
T ss_pred HHHHhchhccccccccccccCcCC
Confidence 389999999999999999666643
No 68
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=20.25 E-value=1.8e+02 Score=22.34 Aligned_cols=41 Identities=17% Similarity=0.362 Sum_probs=31.3
Q ss_pred ceEEE--EEEEcCCCCCCC-CcEEEEEEEcCCCCCCCCCceeecCC
Q 027085 25 ILEWH--YVLEGSNGTPFA-GGYYYGKIKFPPEYPYKPPGILMITP 67 (228)
Q Consensus 25 l~~w~--~~I~Gp~~TpYe-gG~f~~~i~fp~~YP~~pP~v~F~tP 67 (228)
+++|. +.+.|+.|.... .-+=++...+-+.|+ .|...+..|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~p 75 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDP 75 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECST
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCC
Confidence 47998 899999988664 355677888889887 477777764
Done!