BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027086
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SE33|RAR1_ARATH Cysteine and histidine-rich domain-containing protein RAR1
OS=Arabidopsis thaliana GN=RAR1 PE=1 SV=1
Length = 226
Score = 317 bits (812), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 175/221 (79%), Gaps = 8/221 (3%)
Query: 8 ALKRLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPG 67
A K+L+CQRIGCNA FT+DDNP+GSC FH SGP FHDGMKEWSCCK+RSHDFSLFLEIPG
Sbjct: 6 ATKKLQCQRIGCNAMFTDDDNPQGSCQFHASGPFFHDGMKEWSCCKQRSHDFSLFLEIPG 65
Query: 68 CKTGKHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAK 127
CKTGKHTTEKPVL K V P AP+++ ++ +K+ CSRCRQGFFCSDHGSQ K
Sbjct: 66 CKTGKHTTEKPVLAKSVPKH----PVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPK 121
Query: 128 EQTNYAPAVPAGSN---VAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETACSY 184
EQ P + + PPV K I IN+PQ+CKNKGCG+TFKE+DNHETACS+
Sbjct: 122 EQIKQTLNTPGQAEEEKIEPLAPPV-QKAVIDINQPQVCKNKGCGQTFKERDNHETACSH 180
Query: 185 HPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDAN 225
HPGPAVFHDR+RGWKCCD+HVKEFDEFM IPPCTKGWH ++
Sbjct: 181 HPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSSS 221
>sp|Q6EPW7|RAR1_ORYSJ Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza
sativa subsp. japonica GN=RAR1 PE=1 SV=2
Length = 233
Score = 286 bits (732), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 171/224 (76%), Gaps = 24/224 (10%)
Query: 13 RCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGK 72
RCQRIGC+ATFT+D+NP+GSC +H SGP+FHDGMK+WSCCK++SHDFSLFL IPGCKTGK
Sbjct: 25 RCQRIGCDATFTDDNNPDGSCQYHPSGPMFHDGMKQWSCCKQKSHDFSLFLAIPGCKTGK 84
Query: 73 HTTEKPVLTKPVATSKTPA-PAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAKEQTN 131
HTTEKP+ TK V T + A P ++G+ T CSRCRQGFFCSDHGSQ K Q
Sbjct: 85 HTTEKPI-TKAVPTKPSKAVPVQTSKQSVGADT-----CSRCRQGFFCSDHGSQPKAQI- 137
Query: 132 YAPAVPAGSNVAAEVPPVPVKKK--------IGINEPQICKNKGCGKTFKEKDNHETACS 183
P + +N+ VPV+K I +NEP++CKNKGCGKT+KEKDNH+ AC
Sbjct: 138 --PTATSDTNM------VPVEKPAVPPPKKKIDLNEPRVCKNKGCGKTYKEKDNHDEACD 189
Query: 184 YHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDANLS 227
YHPGPAVF DR+RGWKCCDIHVKEFDEFM IPPCTKGWH+A+ +
Sbjct: 190 YHPGPAVFRDRIRGWKCCDIHVKEFDEFMEIPPCTKGWHNADAA 233
>sp|Q9UHD1|CHRD1_HUMAN Cysteine and histidine-rich domain-containing protein 1 OS=Homo
sapiens GN=CHORDC1 PE=1 SV=2
Length = 332
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQA----- 126
+H +EKP P P +T KELC + F +H QA
Sbjct: 63 RHNSEKP---------------PEPVKPEVKTTEKKELC-ELKPKF--QEHIIQAPKPVE 104
Query: 127 --------KEQTNYAPAVPAGSNVAAEVPPVPV-----KKKIGINEPQI---CKNKGCGK 170
+ TN + A A + + KK+ +E +I CKN GC K
Sbjct: 105 AIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSK 164
Query: 171 TFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
T++ ++ E C YH G +FH+ M+ W CC +F+ F+ CTKG H
Sbjct: 165 TYQGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKH 216
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 5 NDDALKRLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLE 64
ND+ C+ GC+ T+ ++ E C +H PIFH+GMK WSCC+R++ DF+ FL
Sbjct: 148 NDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLA 207
Query: 65 IPGCKTGKHTTEKPVLTKPVA 85
GC GKH K K V
Sbjct: 208 QEGCTKGKHMWTKKDAGKKVV 228
>sp|Q6NUA0|CHRD1_XENLA Cysteine and histidine-rich domain-containing protein 1 OS=Xenopus
laevis GN=chordc1 PE=2 SV=1
Length = 334
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC + + N + SCT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRYDPEGNSDDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPS-KELCSRCRQGFFCSDHGSQAKEQT 130
+H EKP +PV K + L P EL + + C + S +
Sbjct: 63 QHNNEKP--PEPV---KPEVKITSDKKELADFKPKFNELIIQAPKPIECINRPSSDE--- 114
Query: 131 NYAPAVPAGSNVAAEVPPVPVKKKIGINEPQI------------CKNKGCGKTFKEKDNH 178
P ++A + K K+ N+ + CKN GC KTF ++
Sbjct: 115 ---PMAKLQLKISASLKQALDKLKLSENDKTVTDESGEIKIGTSCKNGGCLKTFAGPQSN 171
Query: 179 ETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
E C YH G +FH+ M+ W CC +F+ F+ + CTKG H
Sbjct: 172 EEVCHYHSGVPIFHEGMKYWSCCRRKTSDFNTFLSLEGCTKGTH 215
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ + + N + +C+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRYDPEGNSDDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGQ 63
Query: 222 HD 223
H+
Sbjct: 64 HN 65
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC TF + E C +H PIFH+GMK WSCC+R++ DF+ FL + GC G H
Sbjct: 156 CKNGGCLKTFAGPQSNEEVCHYHSGVPIFHEGMKYWSCCRRKTSDFNTFLSLEGCTKGTH 215
Query: 74 TTEK 77
K
Sbjct: 216 LWTK 219
>sp|Q4R7U2|CHRD1_MACFA Cysteine and histidine-rich domain-containing protein 1 OS=Macaca
fascicularis GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 106/240 (44%), Gaps = 55/240 (22%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C C F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRACGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKP-------VLT---------------------KPVATSKTPAP-APAPSTTLGS 102
+H +EKP V T KPV K P+P P + L
Sbjct: 63 RHNSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKI 122
Query: 103 STPSKELCSRCRQGFFCSDHGSQAKEQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQI 162
S K+ + + S + KE+ N E+ KIG +
Sbjct: 123 SASLKQALDKLK---LSSGNEEDKKEEDN------------DEI-------KIGTS---- 156
Query: 163 CKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
CKN GC KT++ ++ E C YH G +FH+ M+ W CC +F+ F+ CTKG H
Sbjct: 157 CKNGGCSKTYRGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGRH 216
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+ CG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRACGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 5 NDDALKRLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLE 64
ND+ C+ GC+ T+ ++ E C +H PIFH+GMK WSCC+R++ DF+ FL
Sbjct: 148 NDEIKIGTSCKNGGCSKTYRGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLA 207
Query: 65 IPGCKTGKHTTEKPVLTKPVA 85
GC G+H K K V
Sbjct: 208 QEGCTKGRHMWTKKDAGKKVV 228
>sp|D4A4T9|CHRD1_RAT Cysteine and histidine-rich domain-containing protein 1 OS=Rattus
norvegicus GN=Chordc1 PE=3 SV=1
Length = 331
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPEANADDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQA----- 126
+H +EKP P P +T KEL S + F +H QA
Sbjct: 63 RHNSEKP---------------PEPVKPEVKTTEKKEL-SELKPKF--QEHIIQAPKPVE 104
Query: 127 --------KEQTNYAPAVPAGSNVAAEVPPVPV-----KKKIGINEPQI---CKNKGCGK 170
+ TN + A A + + KK+ +E +I CKN GC K
Sbjct: 105 AIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEEDKKEEDSDEIKIGTSCKNGGCSK 164
Query: 171 TFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
T++ + E C YH G +FH+ M+ W CC +F+ F+ CT+G H
Sbjct: 165 TYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKH 216
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPEANADDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC+ T+ + E C +H PIFH+GMK WSCC+R++ DF+ FL GC GKH
Sbjct: 157 CKNGGCSKTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKH 216
Query: 74 TTEKPVLTKPVA 85
K K V
Sbjct: 217 VWTKKDAGKKVV 228
>sp|Q9D1P4|CHRD1_MOUSE Cysteine and histidine-rich domain-containing protein 1 OS=Mus
musculus GN=Chordc1 PE=1 SV=1
Length = 331
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPEANSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQA----- 126
+H +EKP P P +T KEL S + F +H QA
Sbjct: 63 RHNSEKP---------------PEPVKPEVKTTEKKEL-SELKPKF--QEHIIQAPKPVE 104
Query: 127 --------KEQTNYAPAVPAGSNVAAEVPPVPV-----KKKIGINEPQI---CKNKGCGK 170
+ TN + A A + + KK+ +E +I CKN GC K
Sbjct: 105 AIKRPSPDEPMTNLELKISASLKQALDKLKLSSGSEEDKKEEDSDEIKIGTSCKNGGCSK 164
Query: 171 TFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
T++ + E C YH G +FH+ M+ W CC +F+ F+ CT+G H
Sbjct: 165 TYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKH 216
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPEANSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC+ T+ + E C +H PIFH+GMK WSCC+R++ DF+ FL GC GKH
Sbjct: 157 CKNGGCSKTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKH 216
Query: 74 TTEKPVLTKPVA 85
K K V
Sbjct: 217 VWTKKDAGKKVV 228
>sp|Q5RD91|CHRD1_PONAB Cysteine and histidine-rich domain-containing protein 1 OS=Pongo
abelii GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 106/240 (44%), Gaps = 55/240 (22%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKP-------VLT---------------------KPVATSKTPAP-APAPSTTLGS 102
+H +EKP V T KPV K P+P P + L
Sbjct: 63 RHNSEKPPESVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKI 122
Query: 103 STPSKELCSRCRQGFFCSDHGSQAKEQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQI 162
S K+ + + S + KE+ N E+ KIG +
Sbjct: 123 SASLKQALDKLK---LSSGNEENKKEEDN------------DEI-------KIGTS---- 156
Query: 163 CKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
CKN GC KT++ ++ E C YH G + H+ M+ W CC +F+ F+ CTKG H
Sbjct: 157 CKNGGCSKTYRGLESLEEVCVYHSGVPISHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKH 216
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 5 NDDALKRLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLE 64
ND+ C+ GC+ T+ ++ E C +H PI H+GMK WSCC+R++ DF+ FL
Sbjct: 148 NDEIKIGTSCKNGGCSKTYRGLESLEEVCVYHSGVPISHEGMKYWSCCRRKTSDFNTFLA 207
Query: 65 IPGCKTGKHTTEKPVLTKPVA 85
GC GKH K K V
Sbjct: 208 QEGCTKGKHMWTKKDAGKKVV 228
>sp|Q29RL2|CHRD1_BOVIN Cysteine and histidine-rich domain-containing protein 1 OS=Bos
taurus GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQA----- 126
+H +EKP P P +T KEL S + F +H QA
Sbjct: 63 RHNSEKP---------------PEPVKPEVKTTEKKEL-SELKPKF--QEHIIQAPKPVE 104
Query: 127 --------KEQTNYAPAVPAGSNVAAEVPPVPV-----KKKIGINEPQI---CKNKGCGK 170
+ TN + A A + + KK+ +E +I CKN GC K
Sbjct: 105 AIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKIGTSCKNGGCSK 164
Query: 171 TFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
T++ + E C YH G +FH+ M+ W CC +F+ F+ CT G H
Sbjct: 165 TYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKH 216
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC+ T+ + E C +H PIFH+GMK WSCC+R++ DF+ FL GC TGKH
Sbjct: 157 CKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKH 216
Query: 74 TTEKPVLTKPVA 85
K K V
Sbjct: 217 MWTKKDAGKKVV 228
>sp|Q5ZML4|CHRD1_CHICK Cysteine and histidine-rich domain-containing protein 1 OS=Gallus
gallus GN=CHORDC1 PE=2 SV=1
Length = 331
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 103/233 (44%), Gaps = 41/233 (17%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N E SCT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPETNTEDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQA----- 126
H +EKP P P + S+T KEL + + F +H QA
Sbjct: 63 LHNSEKP-----------PEPVKP---DVKSTTERKEL-AELKPKF--QEHIIQAPKPLE 105
Query: 127 --KEQTNYAPAVPAGSNVAAEVPPVPVKKK---------------IGINEPQICKNKGCG 169
K + P V+A + K K I I P CKN GC
Sbjct: 106 TIKRPSPDEPMTNLQLKVSASLKQALDKLKLSSENEEKKEEDSDEIKIGTP--CKNAGCS 163
Query: 170 KTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
KT++ + E C YH G +FH+ M+ W CC +F+ F+ CT G H
Sbjct: 164 KTYQGPHSTEEVCQYHSGVPIFHEGMKYWSCCKRKTSDFNTFLAQEGCTTGTH 216
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N E +C+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPETNTEDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGL 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC+ T+ + E C +H PIFH+GMK WSCCKR++ DF+ FL GC TG H
Sbjct: 157 CKNAGCSKTYQGPHSTEEVCQYHSGVPIFHEGMKYWSCCKRKTSDFNTFLAQEGCTTGTH 216
Query: 74 TTEK 77
K
Sbjct: 217 VWTK 220
>sp|A9YUB1|CHRD1_PIG Cysteine and histidine-rich domain-containing protein 1 OS=Sus
scrofa GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQA----- 126
+H +EKP P P +T KEL S + F +H QA
Sbjct: 63 RHNSEKP---------------PEPVKPEVKTTEKKEL-SELKPRF--QEHIIQAPKPVE 104
Query: 127 --------KEQTNYAPAVPAGSNVAAEVPPVPV-----KKKIGINEPQI---CKNKGCGK 170
+ TN + A A + + KK+ +E ++ CKN GC K
Sbjct: 105 AIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKVGTSCKNGGCSK 164
Query: 171 TFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
T++ + E C YH G +FH+ M+ W CC +F+ F+ CT G H
Sbjct: 165 TYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKH 216
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGR 63
Query: 222 HDA 224
H++
Sbjct: 64 HNS 66
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC+ T+ + E C +H PIFH+GMK WSCC+R++ DF+ FL GC TGKH
Sbjct: 157 CKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKH 216
Query: 74 TTEKPVLTKPVA 85
T K K V
Sbjct: 217 TWTKKDAGKKVV 228
>sp|Q462R2|ITBP2_PIG Integrin beta-1-binding protein 2 OS=Sus scrofa GN=ITGB1BP2 PE=2
SV=1
Length = 346
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F N SC H P+FHD +K WSCC++R+ DFS FL I GC G
Sbjct: 3 LLCHNKGCGQHFDPQTNLPDSCCHHPGVPVFHDALKGWSCCRKRTVDFSEFLNIKGCTVG 62
Query: 72 KHTTEK---------PVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDH 122
H EK P + + K P P + TL P +L + S
Sbjct: 63 PHCAEKLPEAPQPEGPATSSSLLEQKPPNTIPKSAETLRRERPKSDLPPKLLP-LNISQA 121
Query: 123 GSQAKEQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETAC 182
A EQ AG + + I C+N GC ++ ++ T C
Sbjct: 122 LEMALEQKELDQEPGAGLDSSL------------IQTGASCQNPGCDAVYQGSESDATPC 169
Query: 183 SYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHD 223
+YHPG FH+ M+ W CC I +F F+ P C G HD
Sbjct: 170 TYHPGAPRFHEGMKSWSCCGIQTLDFGVFLAQPGCRVGRHD 210
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
CQ GC+A + ++ CT+H P FH+GMK WSCC ++ DF +FL PGC+ G+H
Sbjct: 150 CQNPGCDAVYQGSESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGVFLAQPGCRVGRH 209
Query: 74 TTEKPVLT 81
K +L
Sbjct: 210 DWGKKLLA 217
>sp|Q7T3F7|CHRD1_DANRE Cysteine and histidine-rich domain-containing protein 1 OS=Danio
rerio GN=chordc1 PE=2 SV=1
Length = 341
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 100/235 (42%), Gaps = 47/235 (20%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N + +CT+H P+FHD +K WSCCKRR+ DFS FL I GC G
Sbjct: 3 LMCYNKGCGQRFDLEKNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKG 62
Query: 72 KHTTEKP------------------------VLTKPVATSKTPAPAPAPSTTLGSSTPSK 107
H EKP ++ P P+P ++ S S
Sbjct: 63 PHNQEKPAEPVKPEVKSSLDKNDVKPKYDEFIIQAPKPLESIQRPSPDEPFSILQSKISP 122
Query: 108 ELCSRCRQGFFCSDHGSQAKEQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKG 167
L + ++ + KE+ + E+ KIG + CKN G
Sbjct: 123 SLKQALEKLKLTEENAHEIKEED------------SDEI-------KIGTS----CKNGG 159
Query: 168 CGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
C KTF + + + C YH G +FH+ M+ W CC +F+ F+ CT+G H
Sbjct: 160 CCKTFAGQASDDETCLYHAGVPIFHEGMKYWSCCKRKTSDFNTFLSQEGCTRGKH 214
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 162 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGW 221
+C NKGCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG
Sbjct: 4 MCYNKGCGQRFDLEKNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGP 63
Query: 222 HD 223
H+
Sbjct: 64 HN 65
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
C+ GC TF + + +C +H PIFH+GMK WSCCKR++ DF+ FL GC GKH
Sbjct: 155 CKNGGCCKTFAGQASDDETCLYHAGVPIFHEGMKYWSCCKRKTSDFNTFLSQEGCTRGKH 214
Query: 74 TTEKPVLTKPVA 85
+K K V
Sbjct: 215 QWKKKDAGKKVV 226
>sp|Q9UKP3|ITBP2_HUMAN Integrin beta-1-binding protein 2 OS=Homo sapiens GN=ITGB1BP2 PE=2
SV=1
Length = 347
Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 92/221 (41%), Gaps = 23/221 (10%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C+ GC F + N SC H PIFHD +K WSCC++R+ DFS FL I GC G
Sbjct: 3 LLCRNKGCGQHFDPNTNLPDSCCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTMG 62
Query: 72 KHTTEK---------PVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDH 122
H EK P + + K P + TL P EL + S
Sbjct: 63 PHCAEKLPEAPQPEGPATSSSLQEQKPLNVIPKSAETLRRERPKSELPLKLLP-LNISQA 121
Query: 123 GSQAKEQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETAC 182
A EQ AG + I C+N GC ++ ++ T C
Sbjct: 122 LEMALEQKELDQEPGAGLDSL-------------IRTGSSCQNPGCDAVYQGPESDATPC 168
Query: 183 SYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHD 223
+YHPG FH+ M+ W CC I +F F+ P C G HD
Sbjct: 169 TYHPGAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHD 209
>sp|Q9R000|ITBP2_MOUSE Integrin beta-1-binding protein 2 OS=Mus musculus GN=Itgb1bp2 PE=2
SV=1
Length = 350
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 12 LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 71
L C GC F + N SC +H PIFHD +K WSCC++R+ DFS FL I GC G
Sbjct: 3 LLCYNKGCGQHFDPNTNLPDSCRYHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVG 62
Query: 72 KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAKEQTN 131
H EK P P +++L P + + + F S+ +
Sbjct: 63 LHCAEK-------LPEVPPQPEGPATSSLQEQKPLNTI-PKSAETLFRERPKSEMPPKL- 113
Query: 132 YAPAVPAGSNVAAEVPPVPVKKKIGINEPQI-----CKNKGCGKTFKEKDNHETACSYHP 186
+ VA E + + G++ I C+N GC ++ ++ T C+YHP
Sbjct: 114 LPLLISQALGVALEQKELDQEPGAGLDNSLIWTGSSCQNPGCDAVYQGPESDATPCTYHP 173
Query: 187 GPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHD 223
G FH+ M+ W CC I +F F+ P C G HD
Sbjct: 174 GAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHD 210
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 14 CQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKH 73
CQ GC+A + ++ CT+H P FH+GMK WSCC ++ DF FL PGC+ G+H
Sbjct: 150 CQNPGCDAVYQGPESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRH 209
Query: 74 TTEK 77
K
Sbjct: 210 DWAK 213
>sp|Q9VCC0|CHRD1_DROME Cysteine and histidine-rich domain-containing protein OS=Drosophila
melanogaster GN=CHORD PE=1 SV=1
Length = 354
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 85/211 (40%), Gaps = 15/211 (7%)
Query: 13 RCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGK 72
+C GC F N + SC H P FHD K WSCC ++S DF+ FL I GC K
Sbjct: 3 QCYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAK 62
Query: 73 HTTEKPVL-TKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAKEQTN 131
H+ KP KPV + + P + S Q
Sbjct: 63 HSNVKPPEPEKPVKDESDKDEVIEVRAPIREALPRPPIDSPL------------TVIQPT 110
Query: 132 YAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETACSYHPGPAVF 191
APA+ V A P K I CKN GC +F + C+YHPG +F
Sbjct: 111 VAPAL--KDMVFAVKTPAAQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIF 168
Query: 192 HDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 222
H+ M+ W CC +F +FM CT G H
Sbjct: 169 HEGMKFWSCCQKRTSDFSQFMAQKGCTYGEH 199
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 2 ASQNDDALKR-LRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFS 60
A ++ DA++ C+ GC +FT + + G CT+H PIFH+GMK WSCC++R+ DFS
Sbjct: 127 AQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQKRTSDFS 186
Query: 61 LFLEIPGCKTGKH 73
F+ GC G+H
Sbjct: 187 QFMAQKGCTYGEH 199
>sp|Q08D51|ATG2A_XENTR Autophagy-related protein 2 homolog A OS=Xenopus tropicalis
GN=atg2a PE=2 SV=1
Length = 1997
Score = 35.0 bits (79), Expect = 0.44, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 69 KTGKHTTEKPVLTKPVATSKTPA------PAPAPSTTLGSSTPSKELCSRCRQ 115
+T T E P+ ++PV SKTP+ PAP+P +GS + EL + +Q
Sbjct: 244 QTPSPTPENPLESEPVQPSKTPSWPEEPQPAPSPIQQIGSCSGCTELTIKLKQ 296
>sp|Q04088|POF21_ARATH Probable transcription factor PosF21 OS=Arabidopsis thaliana
GN=POSF21 PE=2 SV=1
Length = 398
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 29 PEGSCT-FHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTGKHTTEKPVLTKP 83
P G C+ F ++GPI H S R SHD S L+ P K G +LT P
Sbjct: 19 PSGRCSAFSEAGPIGH-----GSDANRMSHDISRMLDNPPKKIGHRRAHSEILTLP 69
>sp|Q4P5R8|STU1_USTMA Protein STU1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=STU1
PE=3 SV=1
Length = 1210
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 77 KPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAKEQTNYAPAV 136
+ VL P A + P +P TT +T S+ F S HG+ A T+Y +
Sbjct: 249 REVLGAPSAATSAPVLSPPAPTTFAPTTRSQ----------FNSSHGADASIPTSYMKSA 298
Query: 137 PAGSNVAAEVP 147
PA +P
Sbjct: 299 PAAGTTFPSMP 309
>sp|Q9Z0U1|ZO2_MOUSE Tight junction protein ZO-2 OS=Mus musculus GN=Tjp2 PE=1 SV=2
Length = 1167
Score = 32.0 bits (71), Expect = 3.6, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 64 EIPGCKTGKH---TTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQG---- 116
EIPG T + KP +P+ TP P P S +G ST +E R G
Sbjct: 1003 EIPGGSTKGYPPPIAAKPAFGRPILKPSTPVPMPE-SEEVGESTEEQEDAPRSVLGRVKI 1061
Query: 117 FFCSDHGSQAKEQTNYAPAVPAGSNVAAEVP---PVPVK 152
F DH ++ + A A +A + P VP+K
Sbjct: 1062 FEKMDHKAKLQRMQELQEAQNARIEIAQKHPDIYAVPIK 1100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,297,030
Number of Sequences: 539616
Number of extensions: 4286254
Number of successful extensions: 15583
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 15372
Number of HSP's gapped (non-prelim): 253
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)