Query 027086
Match_columns 228
No_of_seqs 160 out of 392
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 07:22:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027086.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027086hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1btka_ b.55.1.1 (A:) Bruton's 69.4 1.1 7.7E-05 33.6 2.2 19 181-203 138-156 (169)
2 d1ubdc1 g.37.1.1 (C:295-322) Y 62.3 1.4 0.0001 25.3 1.2 14 12-25 2-15 (28)
3 d1btka_ b.55.1.1 (A:) Bruton's 62.0 1.5 0.00011 32.8 1.7 32 28-69 134-165 (169)
4 d1ubdc4 g.37.1.1 (C:381-408) Y 58.9 2.2 0.00016 24.3 1.7 18 12-29 3-20 (28)
5 d1bhia_ g.37.1.1 (A:) Transact 35.3 4.5 0.00033 24.8 0.4 19 9-27 4-22 (38)
6 d1a1ia1 g.37.1.1 (A:103-131) Z 29.9 8.9 0.00065 21.7 1.1 17 12-28 3-19 (29)
7 d2glia5 g.37.1.1 (A:229-257) F 29.7 4.3 0.00032 23.5 -0.4 16 161-176 3-18 (29)
8 d1zfda_ g.37.1.1 (A:) SWI5 zin 29.5 6.4 0.00047 22.8 0.4 18 11-28 3-20 (32)
9 d2j7ja2 g.37.1.1 (A:29-57) Tra 29.4 10 0.00076 21.6 1.3 15 11-25 3-17 (29)
10 d6rxna_ g.41.5.1 (A:) Rubredox 28.6 11 0.0008 23.5 1.4 38 11-59 3-42 (45)
11 d2glia3 g.37.1.1 (A:168-197) F 27.3 11 0.00077 21.5 1.1 17 12-28 3-19 (30)
12 d1ubdc3 g.37.1.1 (C:351-380) Y 22.5 15 0.0011 20.7 1.1 16 12-27 3-18 (30)
13 d1sp2a_ g.37.1.1 (A:) Transcri 22.0 16 0.0012 20.6 1.2 17 12-28 3-19 (31)
No 1
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.43 E-value=1.1 Score=33.65 Aligned_cols=19 Identities=32% Similarity=0.721 Sum_probs=13.1
Q ss_pred CceecCCCccccCCCCeeecCCc
Q 027086 181 ACSYHPGPAVFHDRMRGWKCCDI 203 (228)
Q Consensus 181 ~C~yHpG~PvFHeg~K~WsCC~~ 203 (228)
.=.||||. |=+ .+||||..
T Consensus 138 ~~~~h~~~--~~~--~~w~c~~~ 156 (169)
T d1btka_ 138 VQKYHPCF--WID--GQYLCCSQ 156 (169)
T ss_dssp CSEECSSC--EET--TEETTTCC
T ss_pred ccccCccc--ccC--CEEcCCCC
Confidence 34688886 444 46999965
No 2
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.29 E-value=1.4 Score=25.33 Aligned_cols=14 Identities=29% Similarity=0.930 Sum_probs=12.2
Q ss_pred cccccCCCCceeCC
Q 027086 12 LRCQRIGCNATFTE 25 (228)
Q Consensus 12 ~~C~n~GCg~~f~~ 25 (228)
+.|-++||+|.|.+
T Consensus 2 i~CphkgC~K~Frd 15 (28)
T d1ubdc1 2 IACPHKGCTKMFRD 15 (28)
T ss_dssp EECCSTTCCCEESS
T ss_pred ccCCcccHHHHhhc
Confidence 56999999999965
No 3
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.98 E-value=1.5 Score=32.77 Aligned_cols=32 Identities=25% Similarity=0.642 Sum_probs=19.6
Q ss_pred CCCCCccccCCCCcccCCCcccccCCCcccChhhhcCCCCCC
Q 027086 28 NPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCK 69 (228)
Q Consensus 28 N~~~~C~~HpG~PvFHd~~K~WsCC~k~~~df~eFl~i~gCt 69 (228)
|..-.=.||||. |=++ .||||.... .+-.||.
T Consensus 134 ~~~~~~~~h~~~--~~~~--~w~c~~~~~------~~~~~~~ 165 (169)
T d1btka_ 134 NSDLVQKYHPCF--WIDG--QYLCCSQTA------KNAMGCQ 165 (169)
T ss_dssp CSCCCSEECSSC--EETT--EETTTCCCC------TTSCCSE
T ss_pred CcccccccCccc--ccCC--EEcCCCCcC------CCCCCCe
Confidence 333445688886 4444 599999532 2356774
No 4
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.91 E-value=2.2 Score=24.32 Aligned_cols=18 Identities=33% Similarity=0.652 Sum_probs=15.4
Q ss_pred cccccCCCCceeCCCCCC
Q 027086 12 LRCQRIGCNATFTEDDNP 29 (228)
Q Consensus 12 ~~C~n~GCg~~f~~~~N~ 29 (228)
..|.-.|||+.|.-.+|.
T Consensus 3 f~C~~~gC~K~F~~~~~L 20 (28)
T d1ubdc4 3 YVCPFDGCNKKFAQSTNL 20 (28)
T ss_dssp CCCCSTTCCCCCSSTTTT
T ss_pred cCCCCCCcCCcCCCHHHH
Confidence 579999999999987764
No 5
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.32 E-value=4.5 Score=24.77 Aligned_cols=19 Identities=37% Similarity=0.742 Sum_probs=15.8
Q ss_pred ccccccccCCCCceeCCCC
Q 027086 9 LKRLRCQRIGCNATFTEDD 27 (228)
Q Consensus 9 ~~~~~C~n~GCg~~f~~~~ 27 (228)
+....|.-.||+|.|..++
T Consensus 4 dkPF~C~~pGC~q~F~neD 22 (38)
T d1bhia_ 4 DKPFLCTAPGCGQRFTNED 22 (38)
T ss_dssp CCCEECCCTTTCCEESSHH
T ss_pred CCceecCCCCccccccchH
Confidence 5567899999999998654
No 6
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.92 E-value=8.9 Score=21.66 Aligned_cols=17 Identities=18% Similarity=0.600 Sum_probs=13.7
Q ss_pred cccccCCCCceeCCCCC
Q 027086 12 LRCQRIGCNATFTEDDN 28 (228)
Q Consensus 12 ~~C~n~GCg~~f~~~~N 28 (228)
..|.-.|||+.|...++
T Consensus 3 ~~C~~~gC~k~F~~~~~ 19 (29)
T d1a1ia1 3 YACPVESCDRRFSRSAD 19 (29)
T ss_dssp EECCSTTCCCEESSHHH
T ss_pred eECCCCCCCcEECchhH
Confidence 57999999999976543
No 7
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.69 E-value=4.3 Score=23.48 Aligned_cols=16 Identities=31% Similarity=0.839 Sum_probs=13.3
Q ss_pred CccccCCCCceeecCC
Q 027086 161 QICKNKGCGKTFKEKD 176 (228)
Q Consensus 161 ~~C~n~GC~~~~~~~~ 176 (228)
..|+-.||++.|....
T Consensus 3 Y~Ck~~gC~K~YtdPS 18 (29)
T d2glia5 3 YVCKLPGCTKRYTDPS 18 (29)
T ss_dssp EECCSTTTCCEESSHH
T ss_pred eecccCCCCcccCCHH
Confidence 4699999999998653
No 8
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.45 E-value=6.4 Score=22.76 Aligned_cols=18 Identities=22% Similarity=0.778 Sum_probs=14.6
Q ss_pred ccccccCCCCceeCCCCC
Q 027086 11 RLRCQRIGCNATFTEDDN 28 (228)
Q Consensus 11 ~~~C~n~GCg~~f~~~~N 28 (228)
...|.-.|||+.|.-.+|
T Consensus 3 P~~C~~pgC~k~F~r~~~ 20 (32)
T d1zfda_ 3 PYSCDHPGCDKAFVRNHD 20 (32)
T ss_dssp SBCCCCTTCCCCBSSSHH
T ss_pred CeECcCCCCCCeeCCHHH
Confidence 467999999999987654
No 9
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=29.40 E-value=10 Score=21.58 Aligned_cols=15 Identities=27% Similarity=0.758 Sum_probs=12.6
Q ss_pred ccccccCCCCceeCC
Q 027086 11 RLRCQRIGCNATFTE 25 (228)
Q Consensus 11 ~~~C~n~GCg~~f~~ 25 (228)
...|.+-||++.|.-
T Consensus 3 py~c~hegcdk~fs~ 17 (29)
T d2j7ja2 3 PYECPHEGCDKRFSL 17 (29)
T ss_dssp CEECCSTTCCCEESS
T ss_pred CccCCccCccccccC
Confidence 468999999999963
No 10
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=28.64 E-value=11 Score=23.46 Aligned_cols=38 Identities=21% Similarity=0.663 Sum_probs=26.8
Q ss_pred ccccccCCCCceeCCCCCCCCCccccCCCCcccCCCccccc--CCCcccCh
Q 027086 11 RLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSC--CKRRSHDF 59 (228)
Q Consensus 11 ~~~C~n~GCg~~f~~~~N~~~~C~~HpG~PvFHd~~K~WsC--C~k~~~df 59 (228)
..+| .-||-.|+++... |.| |.|--..|.| |+..-.+|
T Consensus 3 ~y~C--~~CgyiYd~~~Gd--------gt~-Fe~LP~dw~CP~C~a~K~~F 42 (45)
T d6rxna_ 3 KYVC--NVCGYEYDPAEHD--------NVP-FDQLPDDWCCPVCGVSKDQF 42 (45)
T ss_dssp CEEE--TTTCCEECGGGGT--------TCC-GGGSCTTCBCTTTCCBGGGE
T ss_pred CeEe--CCCCeEECcccCC--------CCC-HHHCCCCCCCcCCCCcHHHc
Confidence 4578 5899999997642 766 8888899998 44433333
No 11
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.33 E-value=11 Score=21.46 Aligned_cols=17 Identities=24% Similarity=0.694 Sum_probs=13.8
Q ss_pred cccccCCCCceeCCCCC
Q 027086 12 LRCQRIGCNATFTEDDN 28 (228)
Q Consensus 12 ~~C~n~GCg~~f~~~~N 28 (228)
..|...|||+.|.-..+
T Consensus 3 ~~C~~~gCgk~F~~~~~ 19 (30)
T d2glia3 3 HKCTFEGCRKSYSRLEN 19 (30)
T ss_dssp CCCCSTTCCCCCSSHHH
T ss_pred eeCCCCCCCceECChhH
Confidence 57999999999976544
No 12
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.53 E-value=15 Score=20.73 Aligned_cols=16 Identities=31% Similarity=0.685 Sum_probs=12.9
Q ss_pred cccccCCCCceeCCCC
Q 027086 12 LRCQRIGCNATFTEDD 27 (228)
Q Consensus 12 ~~C~n~GCg~~f~~~~ 27 (228)
..|.-.|||+.|....
T Consensus 3 ~~C~~~gCgk~F~~~~ 18 (30)
T d1ubdc3 3 FQCTFEGCGKRFSLDF 18 (30)
T ss_dssp EECCSTTCCCEESCHH
T ss_pred ccCCCCCCCceECcHH
Confidence 4788899999997643
No 13
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.03 E-value=16 Score=20.64 Aligned_cols=17 Identities=29% Similarity=0.622 Sum_probs=13.6
Q ss_pred cccccCCCCceeCCCCC
Q 027086 12 LRCQRIGCNATFTEDDN 28 (228)
Q Consensus 12 ~~C~n~GCg~~f~~~~N 28 (228)
..|.-.|||+.|.-..|
T Consensus 3 f~C~~~~C~k~F~~~~~ 19 (31)
T d1sp2a_ 3 FMCTWSYCGKRFTRSDE 19 (31)
T ss_dssp CBCCSTTCCCBCSSHHH
T ss_pred CCCcCCCCCcCcCChhH
Confidence 57888999999976544
Done!