Query 027089
Match_columns 228
No_of_seqs 124 out of 896
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:26:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027089.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027089hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e6u_A LANC-like protein 1; al 100.0 4.3E-40 1.5E-44 294.1 24.0 222 2-228 182-411 (411)
2 2g0d_A Nisin biosynthesis prot 100.0 9.2E-30 3.2E-34 226.7 18.2 178 39-223 198-395 (409)
3 2g0d_A Nisin biosynthesis prot 99.8 2E-17 6.7E-22 147.1 19.5 167 41-218 132-340 (409)
4 3e6u_A LANC-like protein 1; al 99.7 8.6E-18 2.9E-22 149.9 12.0 165 43-217 161-349 (411)
5 3pmm_A Putative cytoplasmic pr 97.4 0.0013 4.3E-08 57.7 11.5 111 67-182 29-145 (382)
6 2ahf_A Unsaturated glucuronyl 96.9 0.0063 2.2E-07 53.2 10.5 153 63-218 107-295 (377)
7 2ahf_A Unsaturated glucuronyl 96.8 0.0076 2.6E-07 52.6 10.3 131 53-183 154-321 (377)
8 2zzr_A Unsaturated glucuronyl 96.7 0.018 6E-07 50.7 11.7 148 64-218 134-320 (397)
9 3pmm_A Putative cytoplasmic pr 96.6 0.043 1.5E-06 47.9 13.6 164 48-217 113-310 (382)
10 2gz6_A N-acetyl-D-glucosamine 96.6 0.0057 1.9E-07 53.0 7.6 135 49-183 55-208 (388)
11 3gt5_A N-acetylglucosamine 2-e 96.4 0.035 1.2E-06 48.6 12.1 133 50-183 55-209 (402)
12 2zzr_A Unsaturated glucuronyl 96.0 0.047 1.6E-06 47.9 10.5 170 13-183 134-346 (397)
13 3k7x_A LIN0763 protein; Q92DQ0 95.9 0.06 2E-06 46.4 10.6 132 47-183 92-249 (349)
14 3k7x_A LIN0763 protein; Q92DQ0 95.9 0.1 3.6E-06 44.9 11.9 123 49-183 48-186 (349)
15 1nc5_A Hypothetical protein YT 95.3 0.067 2.3E-06 46.3 8.7 147 63-216 106-291 (373)
16 1nc5_A Hypothetical protein YT 95.1 0.12 4.2E-06 44.7 9.8 74 109-183 94-179 (373)
17 1fp3_A N-acyl-D-glucosamine 2- 94.7 0.14 4.8E-06 44.5 9.0 78 107-184 252-351 (402)
18 2gz6_A N-acetyl-D-glucosamine 94.5 0.34 1.2E-05 41.6 11.0 131 52-184 177-341 (388)
19 3k11_A Putative glycosyl hydro 93.2 1.6 5.6E-05 38.7 13.1 168 43-217 141-341 (445)
20 2zbl_A Putative isomerase; N-a 93.1 0.24 8.3E-06 43.4 7.5 130 52-182 56-207 (421)
21 1gxm_A Pectate lyase; mechanis 92.9 0.76 2.6E-05 39.1 9.9 131 49-182 76-249 (332)
22 3k11_A Putative glycosyl hydro 92.5 0.96 3.3E-05 40.2 10.5 85 98-184 80-182 (445)
23 2zbl_A Putative isomerase; N-a 91.8 2.9 9.9E-05 36.4 12.8 77 108-184 253-353 (421)
24 1r76_A Pectate lyase; A-helica 91.1 1.2 4.2E-05 38.9 9.4 132 49-182 151-326 (408)
25 1fp3_A N-acyl-D-glucosamine 2- 89.7 3.1 0.0001 35.8 10.9 78 107-184 61-159 (402)
26 3h7l_A Endoglucanase; dehydrog 88.9 2.6 8.8E-05 38.7 10.1 121 45-181 248-397 (586)
27 3gt5_A N-acetylglucosamine 2-e 85.8 3.9 0.00013 35.3 9.1 83 98-183 50-148 (402)
28 3h7l_A Endoglucanase; dehydrog 73.7 11 0.00037 34.6 8.0 78 101-183 249-339 (586)
29 1nxc_A Mannosyl-oligosaccharid 70.1 16 0.00056 32.5 8.2 120 50-181 64-207 (478)
30 3dss_B Geranylgeranyl transfer 64.7 8 0.00027 32.7 4.8 86 6-101 111-196 (331)
31 1w6k_A Lanosterol synthase; cy 63.6 19 0.00066 33.8 7.7 89 50-138 458-571 (732)
32 2v8i_A Pectate lyase; periplas 60.9 54 0.0019 29.2 9.3 77 107-185 378-464 (543)
33 2sqc_A Squalene-hopene cyclase 58.8 47 0.0016 30.5 9.3 71 8-88 465-535 (631)
34 1x9d_A Endoplasmic reticulum m 57.5 32 0.0011 31.2 7.6 74 109-182 176-270 (538)
35 2ri9_A Mannosyl-oligosaccharid 54.6 14 0.00049 32.9 4.8 35 151-185 374-408 (475)
36 1nxc_A Mannosyl-oligosaccharid 53.6 15 0.00051 32.8 4.7 34 152-185 373-406 (478)
37 1hcu_A Alpha-1,2-mannosidase; 53.2 15 0.00053 32.9 4.8 34 152-185 394-427 (503)
38 1dl2_A Class I alpha-1,2-manno 52.9 37 0.0013 30.5 7.3 65 119-183 122-209 (511)
39 1dl2_A Class I alpha-1,2-manno 52.8 15 0.00053 33.0 4.7 34 152-185 398-431 (511)
40 1wzz_A Probable endoglucanase; 52.4 38 0.0013 28.6 6.9 116 66-181 64-202 (334)
41 1r76_A Pectate lyase; A-helica 49.7 1.3E+02 0.0044 26.1 15.1 119 67-185 81-260 (408)
42 1x9d_A Endoplasmic reticulum m 48.6 18 0.00062 32.8 4.5 35 151-185 438-472 (538)
43 1w6k_A Lanosterol synthase; cy 45.2 29 0.00099 32.6 5.5 45 44-88 584-631 (732)
44 1hzf_A Complement factor C4A; 44.3 1.4E+02 0.0049 25.0 12.1 41 49-89 123-164 (367)
45 1n4q_B Geranyltransferase type 44.3 67 0.0023 27.5 7.3 32 70-101 145-177 (377)
46 2sqc_A Squalene-hopene cyclase 43.8 56 0.0019 30.0 7.2 45 44-90 38-82 (631)
47 2h6f_B Protein farnesyltransfe 42.9 73 0.0025 27.9 7.5 88 6-101 118-206 (437)
48 1wu4_A Xylanase Y; (alpla/alph 42.3 1.6E+02 0.0055 25.3 9.5 118 7-137 24-168 (396)
49 3dss_B Geranylgeranyl transfer 40.4 19 0.00064 30.4 3.2 83 7-101 160-244 (331)
50 3a0o_A Oligo alginate lyase; a 35.4 1.3E+02 0.0044 28.1 8.4 24 3-26 271-294 (776)
51 3gzk_A Cellulase; fold from GH 35.1 1.7E+02 0.0059 26.2 8.8 24 152-175 309-332 (537)
52 1nov_D Nodamura virus coat pro 33.3 37 0.0013 19.5 2.6 36 13-57 5-40 (44)
53 1ks8_A Endo-B-1,4-glucanase; c 33.2 2.4E+02 0.0082 24.4 9.6 71 107-182 215-287 (433)
54 1n4q_B Geranyltransferase type 32.3 2.3E+02 0.008 24.1 9.7 71 10-89 143-213 (377)
55 1gxm_A Pectate lyase; mechanis 31.7 2.3E+02 0.0079 23.8 12.0 144 73-216 37-230 (332)
56 1v5d_A Chitosanase; chitosan d 30.0 2E+02 0.0068 24.6 8.0 117 63-179 91-228 (386)
57 3ren_A Glycosyl hydrolase, fam 28.3 81 0.0028 26.8 5.1 38 148-185 115-152 (350)
58 3e7j_A Heparinase II protein; 25.7 1E+02 0.0035 29.0 5.8 163 4-174 143-317 (749)
59 1wzz_A Probable endoglucanase; 25.7 94 0.0032 26.1 5.1 38 148-185 107-144 (334)
60 2h6f_B Protein farnesyltransfe 25.5 35 0.0012 30.0 2.4 70 11-90 174-243 (437)
61 2k89_A PLA2P, PLAP, phospholip 24.0 45 0.0015 22.0 2.2 20 4-23 52-71 (80)
62 1kwf_A Endoglucanase A; hydrol 23.9 2.4E+02 0.0083 23.8 7.4 117 66-182 78-215 (363)
63 4acq_A Alpha-2-macroglobulin; 23.2 4.1E+02 0.014 27.0 9.9 39 50-88 1020-1059(1451)
64 2z2q_B Coat protein gamma; wil 22.9 74 0.0025 18.2 2.6 35 13-56 5-39 (44)
65 1g87_A Endocellulase 9G; endog 22.1 4.5E+02 0.015 23.9 10.0 121 49-180 156-290 (614)
66 1tf4_A T. fusca endo/EXO-cellu 21.5 4.6E+02 0.016 23.8 10.1 107 66-179 179-291 (605)
67 3fxd_A Protein ICMQ; helix bun 21.4 60 0.0021 19.9 2.2 16 3-18 2-17 (57)
68 3qxf_A Endoglucanase; cellulas 21.2 1.3E+02 0.0045 25.5 5.1 37 148-184 96-132 (355)
69 3q7a_B Farnesyltransferase bet 21.1 1.8E+02 0.006 26.2 6.1 33 69-101 169-201 (520)
No 1
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=100.00 E-value=4.3e-40 Score=294.10 Aligned_cols=222 Identities=44% Similarity=0.838 Sum_probs=190.3
Q ss_pred CCCCCChhHHHHHHHHHHHhcHHhhhc----CCCCCceeecCccccccccchHHHHHHHHcccCCCc---hHHHHHHHHH
Q 027089 2 GKDTISTAQMRAVVDEIIKAGRRLANR----GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPD---EVEDVKGTLR 74 (228)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~---~~~~~~~~l~ 74 (228)
+.+.++.+.+.++++.|++.++..+.. ...|++|.|.++.++|++||++||+++|++++...+ ..+.++++++
T Consensus 182 ~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~~~~~~~~i~~~l~ 261 (411)
T 3e6u_A 182 GVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVD 261 (411)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCCHHHHHHTHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHHHHHHhhcChHHHHHHHHHHHH
Confidence 455677777899999999998766433 257899999999999999999999999999986543 3678999999
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCC-CCCCccccChhhHH
Q 027089 75 YMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL-LKRVGICHGISGNT 153 (228)
Q Consensus 75 ~l~~~~~~~g~w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lCHG~aG~~ 153 (228)
++.+.++++|+||+.+.++.+...+||||+|||+++++.+.+.++++++.+.++++++.+|+.++ ..++++|||.+|++
T Consensus 262 ~l~~~~~~~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~~ 341 (411)
T 3e6u_A 262 YVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNA 341 (411)
T ss_dssp HHHHTCCTTSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHHH
T ss_pred HHHHhhccCCCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCccCCCCceecChHHHH
Confidence 99987667799998765555667899999999999999999999999999999999999999886 46799999999999
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccccchHHHHHHHHHccCCCCCCCCCCCC
Q 027089 154 YVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL 228 (228)
Q Consensus 154 ~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~~~~~g~~~~~~~~~gl~~G~aGi~~~Ll~l~~~~~~~~~~~~~ 228 (228)
++|+++++.|++++|+++|.++++.++++.. +....+..++|||+|.|||+++|+++.+|++.+||+|||
T Consensus 342 ~~ll~~~~~t~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~~fp~~~~ 411 (411)
T 3e6u_A 342 YAFLTLYNLTQDMKYLYRACKFAEWCLEYGE-----HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411 (411)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHTTTTS-----SCCCCCSSTTSTTTSHHHHHHHHHHHTSGGGCCCTTTCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc-----ccCCCCCCCChhhccHHHHHHHHHHHcCCCcccCCCCCC
Confidence 9999999999999999999998887765421 112223457899999999999999999999999999997
No 2
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.97 E-value=9.2e-30 Score=226.75 Aligned_cols=178 Identities=21% Similarity=0.255 Sum_probs=143.0
Q ss_pred CccccccccchHHHHHHHHcccCC----CchHHHHHHHHHHHHHhcC--CCCC-CCC-CC----------CCCCCccccc
Q 027089 39 GKKYWGAAHGLAGIMHVLMDMELK----PDEVEDVKGTLRYMIKNRF--PSGN-YPS-SE----------GSESDRLVHW 100 (228)
Q Consensus 39 ~~~~~G~aHG~aGi~~~L~~~~~~----~~~~~~~~~~l~~l~~~~~--~~g~-w~~-~~----------~~~~~~~~~W 100 (228)
+..++|++||++||+++|..++.. ++..+.++++++++.+.++ ++|+ ||+ .. .+..+.+.+|
T Consensus 198 ~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~W 277 (409)
T 2g0d_A 198 GCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAW 277 (409)
T ss_dssp CBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCS
T ss_pred CCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcC
Confidence 347899999999999999888642 3457889999999987666 4677 987 11 1123457899
Q ss_pred ccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh-CCCCCCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027089 101 CHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR-GLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFL 179 (228)
Q Consensus 101 C~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i 179 (228)
|||+|||+++++.+++.++|+++.+.++++++.++++ ....++++|||.+|++++|+.+++.+++++|++++.++. ..
T Consensus 278 ChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~~-~~ 356 (409)
T 2g0d_A 278 CYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFN-VN 356 (409)
T ss_dssp SSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHH-HT
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHcC-Cc
Confidence 9999999999999999999999999999999999886 455789999999999999999999999999998887731 11
Q ss_pred HHHHhhhhhcCCCCCCCCccccccchHHHHHHHHHccCCCC-CCC
Q 027089 180 YDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSE-ARF 223 (228)
Q Consensus 180 ~~~~~~~~~~g~~~~~~~~~gl~~G~aGi~~~Ll~l~~~~~-~~~ 223 (228)
.. .. .+ .+....++|||+|.|||+++|+++.+|.+ +.|
T Consensus 357 -~~-~~---~g-~~~~~~~~gL~~G~AGi~~~Ll~l~~p~~~~~W 395 (409)
T 2g0d_A 357 -SE-QI---LE-EYGDESGTGFLEGISGCILVLSKFEYSINFTYW 395 (409)
T ss_dssp -HH-HH---HH-SCCSTTCSSTTTSHHHHHHHHHHHHSCCCSSCG
T ss_pred -ch-hh---cc-ccCCCCCCceeCCHHHHHHHHHHhcCCCCCCCh
Confidence 11 10 11 12334678999999999999999999988 654
No 3
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.77 E-value=2e-17 Score=147.08 Aligned_cols=167 Identities=17% Similarity=0.096 Sum_probs=126.3
Q ss_pred cccccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCC---CCCCCCCCC-----------CCCcccccccCchH
Q 027089 41 KYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPS---GNYPSSEGS-----------ESDRLVHWCHGAPG 106 (228)
Q Consensus 41 ~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~---g~w~~~~~~-----------~~~~~~~WC~G~~G 106 (228)
...++.||.||++++|..++ .+...+.++++++++.+...+. ..|...... ......+||||.+|
T Consensus 132 ~~~dl~~G~aGi~~~Ll~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aG 210 (409)
T 2g0d_A 132 PDYDVIEGLSGILSYLLLIN-DEQYDDLKILIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAG 210 (409)
T ss_dssp HHHSSSSSHHHHHHHHTTCC-CGGGHHHHHHHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHH
T ss_pred ccccHhcCHHHHHHHHHHcc-CchhHHHHHHHHHHHHHHHhcCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHH
Confidence 45699999999999999886 3445677888888888643311 136543211 01246799999999
Q ss_pred HHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhCC---------------------------CCCCccccChhhHHHHHHH
Q 027089 107 VTLTLAKAAEVF-GEKEFLQAAVDAGEVVWKRGL---------------------------LKRVGICHGISGNTYVFLS 158 (228)
Q Consensus 107 i~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~lCHG~aG~~~~ll~ 158 (228)
|++.+..+.... .++++.+.++++++.+.+..+ ...++||||.+|++.+++.
T Consensus 211 i~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~ 290 (409)
T 2g0d_A 211 VGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLY 290 (409)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHH
Confidence 998888877653 478999999988887633110 0247899999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccccchHHHHHHHHHccCC
Q 027089 159 LYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEP 218 (228)
Q Consensus 159 l~~~~~~~~~~~~a~~~~~~i~~~~~~~~~~g~~~~~~~~~gl~~G~aGi~~~Ll~l~~~ 218 (228)
+++.++|++|++.+.+.++.+.++. ....+++||||.+|++++++++++.
T Consensus 291 ~~~~~~d~~~~~~a~~~~~~~~~~~----------~~~~~~~LCHG~aG~~~~l~~l~~~ 340 (409)
T 2g0d_A 291 GGLALDNDYFVDKAEKILESAMQRK----------LGIDSYMICHGYSGLIEICSLFKRL 340 (409)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHC----------TTCCSCCTTTSHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhc----------cCCCCCCCCChHHHHHHHHHHHHHH
Confidence 9999999999999988877776551 1234899999999999999998764
No 4
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=99.74 E-value=8.6e-18 Score=149.85 Aligned_cols=165 Identities=17% Similarity=0.222 Sum_probs=117.8
Q ss_pred cccccchHHHHHHHHcccCC---CchH-HHHHHHHHHHHHhc-----CCCCCCCCCC--CCCCCcccccccCchHHHHHH
Q 027089 43 WGAAHGLAGIMHVLMDMELK---PDEV-EDVKGTLRYMIKNR-----FPSGNYPSSE--GSESDRLVHWCHGAPGVTLTL 111 (228)
Q Consensus 43 ~G~aHG~aGi~~~L~~~~~~---~~~~-~~~~~~l~~l~~~~-----~~~g~w~~~~--~~~~~~~~~WC~G~~Gi~~al 111 (228)
..+.||.||++++|..+++. .... ..+.++++.+.+.. .....|+... .-....+.+||||.+||++++
T Consensus 161 ~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~L 240 (411)
T 3e6u_A 161 NEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYL 240 (411)
T ss_dssp SSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHH
T ss_pred hhhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHH
Confidence 58899999999999999753 1222 22333443333210 0010011100 001244689999999999999
Q ss_pred HHHHHhhCcHHHHHHHHHHHHHHHHhCCC----C---------CCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027089 112 AKAAEVFGEKEFLQAAVDAGEVVWKRGLL----K---------RVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACF 178 (228)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~ 178 (228)
+.+.+.++++++.+.++++++.+.+.... . .++||||.+|++.+++.+++.++++++++.|.+..+.
T Consensus 241 l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~ 320 (411)
T 3e6u_A 241 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADV 320 (411)
T ss_dssp TCGGGCCCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHhhcChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99998899999999999999888664321 0 1479999999999999999999999999998887665
Q ss_pred HHHHHhhhhhcCCCCCCCCccccccchHHHHHHHHHccC
Q 027089 179 LYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIE 217 (228)
Q Consensus 179 i~~~~~~~~~~g~~~~~~~~~gl~~G~aGi~~~Ll~l~~ 217 (228)
+.++ + . ...++|||+|.||++++++++++
T Consensus 321 ~~~~-------g-~--~~~~~~lChG~aG~~~~ll~~~~ 349 (411)
T 3e6u_A 321 IWQY-------G-L--LKKGYGLCHGSAGNAYAFLTLYN 349 (411)
T ss_dssp HHHH-------C-S--BTTCSCSTTSHHHHHHHHHHHHH
T ss_pred HHhc-------C-c--cCCCCceecChHHHHHHHHHHHH
Confidence 5443 1 1 12478999999999999999875
No 5
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.43 E-value=0.0013 Score=57.71 Aligned_cols=111 Identities=12% Similarity=0.100 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCC------CCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCC
Q 027089 67 EDVKGTLRYMIKNRFPSGNYPSSEG------SESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLL 140 (228)
Q Consensus 67 ~~~~~~l~~l~~~~~~~g~w~~~~~------~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (228)
+.+.++++.+.+.+..++.++.... ++.-....||+|. ...++..+++.++|+++.+.+++..+..++.+..
T Consensus 29 ~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~--~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~~ 106 (382)
T 3pmm_A 29 ALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGV--GLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGAT 106 (382)
T ss_dssp HHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTSCSHHHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccCccccccccCCccccccCCCCcCccccHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCCC
Confidence 4556666666442223344432211 1222356788887 5667888899999999999999888777665422
Q ss_pred CCCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 027089 141 KRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDR 182 (228)
Q Consensus 141 ~~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~ 182 (228)
. ..+=.+.+| ..++.+|+.|+|++|++.+.++++.+.+.
T Consensus 107 ~-~n~D~~~~~--~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~ 145 (382)
T 3pmm_A 107 T-KNVNTMAPF--LTLAYRFEETGRMAYLPWLESWAEWAMHE 145 (382)
T ss_dssp C-CCTTTTTTH--HHHHHHHHHHCCGGGHHHHHHHHHHHHHT
T ss_pred c-CcccchHHH--HHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 1 111113333 36789999999999999999999888765
No 6
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=96.91 E-value=0.0063 Score=53.16 Aligned_cols=153 Identities=14% Similarity=0.057 Sum_probs=96.3
Q ss_pred CchHHHHHHHHHHHHHhcC-CC-C---CCCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh
Q 027089 63 PDEVEDVKGTLRYMIKNRF-PS-G---NYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR 137 (228)
Q Consensus 63 ~~~~~~~~~~l~~l~~~~~-~~-g---~w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (228)
+.+++.+.++.+.+.. ++ +. | .|....... ....-|-.-+-- +-++..+++.++|+++.+.|.+.++.+++.
T Consensus 107 ~~~~~~~~~aA~~L~~-r~~~~~g~i~sw~~~~~~~-~~~~~iID~mmn-i~~L~~A~~~~gd~~y~~~A~~~a~~~l~~ 183 (377)
T 2ahf_A 107 ESARKLALDAADVLMR-RWRADAGIIQAWGPKGDPE-NGGRIIIDCLLN-LPLLLWAGEQTGDPEYRRVAEAHALKSRRF 183 (377)
T ss_dssp HHHHHHHHHHHHHHHT-TEETTTTEECCBSSTTCTT-TTTEEEGGGGGG-HHHHHHHHHHHCCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hCCCCCCeEEeccCCCCCC-CCceEEechHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 3456778888888775 44 33 2 253211111 111122111222 557888889999999999999987776543
Q ss_pred C----------------------------CCCCCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhh---
Q 027089 138 G----------------------------LLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKL--- 186 (228)
Q Consensus 138 ~----------------------------~~~~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~~--- 186 (228)
- +..+.++..|.+-.+..+..+|+.|++++|++.|.++.++++++..+.
T Consensus 184 ~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~~~d~~p 263 (377)
T 2ahf_A 184 LVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARVPEDGVV 263 (377)
T ss_dssp TBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCTTSSC
T ss_pred CcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhhHHhCCc
Confidence 1 112358888999999999999999999999999999999988875221
Q ss_pred hhcCCCCCCCCccccccchHHHHHHHHHccCC
Q 027089 187 IAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEP 218 (228)
Q Consensus 187 ~~~g~~~~~~~~~gl~~G~aGi~~~Ll~l~~~ 218 (228)
+.+-..+.....+---.+.|+.+..|+++...
T Consensus 264 ywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~ 295 (377)
T 2ahf_A 264 YWDFEVPQEPSSYRDSSASAITACGLLEIASQ 295 (377)
T ss_dssp BSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCccCCCccCCCHHHHHHHHHHHHHHh
Confidence 00000111111111246778888888887653
No 7
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=96.82 E-value=0.0076 Score=52.63 Aligned_cols=131 Identities=12% Similarity=0.095 Sum_probs=93.5
Q ss_pred HHHHHcccC---CCchHHHHHHHHHHHHHhcCC-CCC-CC----CC-CCC--------CCCcccccccCchHHHHHHHHH
Q 027089 53 MHVLMDMEL---KPDEVEDVKGTLRYMIKNRFP-SGN-YP----SS-EGS--------ESDRLVHWCHGAPGVTLTLAKA 114 (228)
Q Consensus 53 ~~~L~~~~~---~~~~~~~~~~~l~~l~~~~~~-~g~-w~----~~-~~~--------~~~~~~~WC~G~~Gi~~al~~~ 114 (228)
+.+|+..++ .+++++.+.+..+++.++.++ +|. |. +. .+. .-.....|+.|-+-.+++++.+
T Consensus 154 i~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~l 233 (377)
T 2ahf_A 154 LPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALN 233 (377)
T ss_dssp HHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHH
Confidence 446665554 356788899988888876653 343 11 11 111 0011257999999999999999
Q ss_pred HHhhCcHHHHHHHHHHHHHHHHhC------CC--------CCCccccChhhHHHHHHHHHHHhC-----CHHHHHHHHHH
Q 027089 115 AEVFGEKEFLQAAVDAGEVVWKRG------LL--------KRVGICHGISGNTYVFLSLYRLTG-----NVEYLYRAKAF 175 (228)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~------~~--------~~~~lCHG~aG~~~~ll~l~~~~~-----~~~~~~~a~~~ 175 (228)
++.++++++++.+++..+.+++.- +. .++---.+.+..+..|+++++.++ +++|++.|.++
T Consensus 234 y~~T~d~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~ 313 (377)
T 2ahf_A 234 SRYLGNADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTT 313 (377)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHCChHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHH
Confidence 999999999999999888876531 00 012234678889999999999996 67899999998
Q ss_pred HHHHHHHH
Q 027089 176 ACFLYDRA 183 (228)
Q Consensus 176 ~~~i~~~~ 183 (228)
++.+...+
T Consensus 314 l~~l~~~y 321 (377)
T 2ahf_A 314 VTALRDGY 321 (377)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 88887665
No 8
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=96.69 E-value=0.018 Score=50.65 Aligned_cols=148 Identities=13% Similarity=0.064 Sum_probs=95.6
Q ss_pred chHHHHHHHHHHHHHhcC-CCCC----CCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhC
Q 027089 64 DEVEDVKGTLRYMIKNRF-PSGN----YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRG 138 (228)
Q Consensus 64 ~~~~~~~~~l~~l~~~~~-~~g~----w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (228)
.+++.+.++.+++.. ++ +.+. |.... +..+ ..-|-..+. -+-++..+++.++|+++.+.|.+.++.+++.-
T Consensus 134 ~~~~~~~~aA~~L~~-r~~~~~g~iqsw~~~~-~~~~-~~~iID~~m-ni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~ 209 (397)
T 2zzr_A 134 KALEATIKAADKLME-RYQEKGGFIQAWGELG-YKEH-YRLIIDCLL-NIQLLFFAYEQTGDEKYRQVAVNHFYASANNV 209 (397)
T ss_dssp HHHHHHHHHHHHHHT-TEETTTTEECCSSSTT-CGGG-CEEETTHHH-HTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH-HhCcCCCEEEecccCC-CCCC-CceeechHh-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 357788888888875 55 3332 53211 1111 122333333 24466677888999999999998877765431
Q ss_pred ----------------------------CCCCCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhh---h
Q 027089 139 ----------------------------LLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKL---I 187 (228)
Q Consensus 139 ----------------------------~~~~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~~---~ 187 (228)
+..+.+|+.|.+-.++.+..+|+.|+|++|++.|.++.+.++++.... +
T Consensus 210 ~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~py 289 (397)
T 2zzr_A 210 VRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVSY 289 (397)
T ss_dssp BCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCCB
T ss_pred cCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCcc
Confidence 112356777889999999999999999999999999999988875321 0
Q ss_pred hcCC---CCCCCCccccccchHHHHHHHHHccCC
Q 027089 188 AEGK---MHGGDRPYSLFEGIGGMTHLFLDMIEP 218 (228)
Q Consensus 188 ~~g~---~~~~~~~~gl~~G~aGi~~~Ll~l~~~ 218 (228)
.+-. .+....+ -.|.|..+..|+++...
T Consensus 290 wdt~~~~~~~~~~D---~Sa~aiaA~~Ll~L~~~ 320 (397)
T 2zzr_A 290 WDLIFTDGSGQPRD---TSATATAVCGIHEMLKY 320 (397)
T ss_dssp SBTTCCTTSCCCBC---HHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCCCCCcCC---CCHHHHHHHHHHHHHHh
Confidence 1100 1111112 46777788888887764
No 9
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=96.61 E-value=0.043 Score=47.86 Aligned_cols=164 Identities=14% Similarity=0.087 Sum_probs=101.8
Q ss_pred chHHHHHHHHcccC---CCchHHHHHHHHHHHHHhcC--CCCC-CCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcH
Q 027089 48 GLAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF--PSGN-YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEK 121 (228)
Q Consensus 48 G~aGi~~~L~~~~~---~~~~~~~~~~~l~~l~~~~~--~~g~-w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~ 121 (228)
+..|. +|..+|+ .+.+++.+.+..+++.+... +.|. |.... +......-|+.|.--.+..+..+++.++|+
T Consensus 113 ~~~~~--~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~-~~~~~~~~WiDgl~M~~p~La~~~~~tgd~ 189 (382)
T 3pmm_A 113 MAPFL--TLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTL-AEENHQQMWDDTLMMTVLPLAKIGKLLNRP 189 (382)
T ss_dssp TTTHH--HHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCS-SCCCTTEEETTHHHHTHHHHHHHHHHTTCH
T ss_pred hHHHH--HHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecC-CCCCCCcEEecchhhhHHHHHHHHHHHCCH
Confidence 44443 4455554 35678899999998875332 3444 42211 111233569999877777888999999999
Q ss_pred HHHHHHHHHHHHHHHh------CC------------CCCCccccChhhHHHHHHHHHHH-------hCCHHHHHHHHHHH
Q 027089 122 EFLQAAVDAGEVVWKR------GL------------LKRVGICHGISGNTYVFLSLYRL-------TGNVEYLYRAKAFA 176 (228)
Q Consensus 122 ~~~~~~~~~~~~~~~~------~~------------~~~~~lCHG~aG~~~~ll~l~~~-------~~~~~~~~~a~~~~ 176 (228)
++.+.|.+-+....+. ++ ..+..|+.|.+=.+..+..+++. ++.+++++.+++++
T Consensus 190 ~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a 269 (382)
T 3pmm_A 190 QYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQI 269 (382)
T ss_dssp HHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHH
Confidence 9999887665554432 11 12356667776666677777776 33456777788887
Q ss_pred HHHHHHHhhhhhcCC---CCCCCCccccccchHHHHHHHHHccC
Q 027089 177 CFLYDRAQKLIAEGK---MHGGDRPYSLFEGIGGMTHLFLDMIE 217 (228)
Q Consensus 177 ~~i~~~~~~~~~~g~---~~~~~~~~gl~~G~aGi~~~Ll~l~~ 217 (228)
+.+++...+ +|- ......++-=-.|+|.+++++++..+
T Consensus 270 ~~~~~~q~~---~G~W~~~~d~~~~y~EsSatA~~ay~ll~~~~ 310 (382)
T 3pmm_A 270 AALAECQDD---SGLWHTLLDDPHSYLEASATAGFAYGILKAVR 310 (382)
T ss_dssp HHHHHHCCT---TSCEESBTTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC---CCChhhccCCCCCCccccHHHHHHHHHHHHHH
Confidence 777776432 221 11111133335678888999888665
No 10
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.55 E-value=0.0057 Score=53.03 Aligned_cols=135 Identities=9% Similarity=-0.055 Sum_probs=84.5
Q ss_pred hHHHHHHHHcccCC----CchHHHHHHHHHHHHHhcC-CCCCCCCCCC-CCCC-cccccccCchHHHHHHHHHHHhhCcH
Q 027089 49 LAGIMHVLMDMELK----PDEVEDVKGTLRYMIKNRF-PSGNYPSSEG-SESD-RLVHWCHGAPGVTLTLAKAAEVFGEK 121 (228)
Q Consensus 49 ~aGi~~~L~~~~~~----~~~~~~~~~~l~~l~~~~~-~~g~w~~~~~-~~~~-~~~~WC~G~~Gi~~al~~~~~~~~~~ 121 (228)
.+=++++++..+.. +.+++.++++++|+.+... ++|.|..... +... ....-+++-+=.++++..+++.++++
T Consensus 55 nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~ 134 (388)
T 2gz6_A 55 QNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEE 134 (388)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCH
Confidence 34455666665542 3468899999999997534 4566543211 1111 11223334444777888888999999
Q ss_pred HHHHHHHHHHHHHHHhC-----CC----CCCccccChhh---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 027089 122 EFLQAAVDAGEVVWKRG-----LL----KRVGICHGISG---NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRA 183 (228)
Q Consensus 122 ~~~~~~~~~~~~~~~~~-----~~----~~~~lCHG~aG---~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~ 183 (228)
++++.|.+..+.+.+.- +. ......-|..+ .+..++.++++|++++|++.|.++++.+.++.
T Consensus 135 ~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~ 208 (388)
T 2gz6_A 135 WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDF 208 (388)
T ss_dssp HHHHHHHHHHHHHHTC--------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999888775421 10 00011122333 34456888999999999999999988887664
No 11
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.45 E-value=0.035 Score=48.56 Aligned_cols=133 Identities=17% Similarity=0.161 Sum_probs=86.5
Q ss_pred HHHHHHHHcccC---CCchHHHHHHHHHHHHHhcC-CC-CCCCCCCCCCCC-cccccccCchHHHHHHHHHHHhhCcHHH
Q 027089 50 AGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF-PS-GNYPSSEGSESD-RLVHWCHGAPGVTLTLAKAAEVFGEKEF 123 (228)
Q Consensus 50 aGi~~~L~~~~~---~~~~~~~~~~~l~~l~~~~~-~~-g~w~~~~~~~~~-~~~~WC~G~~Gi~~al~~~~~~~~~~~~ 123 (228)
+=++++++..+. .+.+++.+++.++|+.+... ++ |.|.....+... .....|+.-+=++++++. +..++++++
T Consensus 55 ~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~ 133 (402)
T 3gt5_A 55 TRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQA 133 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTH
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhH
Confidence 445666666653 34568899999999987533 23 554432211111 123567777777778888 556899999
Q ss_pred HHHHHHHHHHHHHhC-------CC----CCCcc--ccChhh---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 027089 124 LQAAVDAGEVVWKRG-------LL----KRVGI--CHGISG---NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRA 183 (228)
Q Consensus 124 ~~~~~~~~~~~~~~~-------~~----~~~~l--CHG~aG---~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~ 183 (228)
++.|++..+.+.+.- +. .+..+ --+... .++.++.++++|++++|+++|+++++.+.++.
T Consensus 134 l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f 209 (402)
T 3gt5_A 134 REWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQ 209 (402)
T ss_dssp HHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 999999888776531 11 11001 012222 45568999999999999999999988877654
No 12
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=96.02 E-value=0.047 Score=47.94 Aligned_cols=170 Identities=10% Similarity=0.062 Sum_probs=106.3
Q ss_pred HHHHHHHHhcHHhhhcCCCCC--ceeecC--c--cccccccchHHHHHHHHcccC---CCchHHHHHHHHHHHHHhcCC-
Q 027089 13 AVVDEIIKAGRRLANRGRCPL--MYEWHG--K--KYWGAAHGLAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRFP- 82 (228)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~--~~~G~aHG~aGi~~~L~~~~~---~~~~~~~~~~~l~~l~~~~~~- 82 (228)
++-+.+++.++-++.|-+... ...|.. . ...-+.-.+. -+.+|+..++ .+++++.+.+..+++.++.++
T Consensus 134 ~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~~~~~~~~iID~~m-ni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~ 212 (397)
T 2zzr_A 134 KALEATIKAADKLMERYQEKGGFIQAWGELGYKEHYRLIIDCLL-NIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRD 212 (397)
T ss_dssp HHHHHHHHHHHHHHTTEETTTTEECCSSSTTCGGGCEEETTHHH-HTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCT
T ss_pred HHHHHHHHHHHHHHHHhCcCCCEEEecccCCCCCCCceeechHh-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCC
Confidence 355666667777766522221 222321 1 1111122222 3445555544 345688888888888876653
Q ss_pred CCC-CC----CC-CCC--------CCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhC------C---
Q 027089 83 SGN-YP----SS-EGS--------ESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRG------L--- 139 (228)
Q Consensus 83 ~g~-w~----~~-~~~--------~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--- 139 (228)
+|. +. +. .+. .-.....|+.|-+-.+++++.+++.++|+++++.+.+..+.+.+.- +
T Consensus 213 dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~pywdt 292 (397)
T 2zzr_A 213 DSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVSYWDL 292 (397)
T ss_dssp TSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCCBSBT
T ss_pred CCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCccccC
Confidence 342 11 10 111 0011237999999999999999999999999999998888776531 0
Q ss_pred -----CCCCccccChhhHHHHHHHHHHHhCC---HH--HHHHHHHHHHHHHHHH
Q 027089 140 -----LKRVGICHGISGNTYVFLSLYRLTGN---VE--YLYRAKAFACFLYDRA 183 (228)
Q Consensus 140 -----~~~~~lCHG~aG~~~~ll~l~~~~~~---~~--~~~~a~~~~~~i~~~~ 183 (228)
...+-=-.|.+..+..|+++++.+++ ++ |.+.|.++++.+...+
T Consensus 293 ~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 346 (397)
T 2zzr_A 293 IFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQY 346 (397)
T ss_dssp TCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHH
Confidence 00111246788888999999999886 77 9999999888877664
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.93 E-value=0.06 Score=46.39 Aligned_cols=132 Identities=13% Similarity=0.023 Sum_probs=81.9
Q ss_pred cchHHHHHHHHcccCC---CchHHHHHHHHHHHHHhcCC---CCC--CCCCCCCCCCcccccccCchHHHHHHHHHHHhh
Q 027089 47 HGLAGIMHVLMDMELK---PDEVEDVKGTLRYMIKNRFP---SGN--YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVF 118 (228)
Q Consensus 47 HG~aGi~~~L~~~~~~---~~~~~~~~~~l~~l~~~~~~---~g~--w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~ 118 (228)
|=.+=.+.++..+++. +.+++.++++.+++....+. .|. |... ..+..... +..-.+.++.++++.+
T Consensus 92 DD~a~~~la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~---~~~~knai--sN~~~~~~la~l~~~t 166 (349)
T 3k7x_A 92 DDMLWNALAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP---QMYYKNTP--VNAPFIILSCWLYNEL 166 (349)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT---EEEEEEHH--HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC---Cccccchh--hHHHHHHHHHHHHHHh
Confidence 4333345566666653 44688889899888333442 233 4321 01111223 4455566677788899
Q ss_pred CcHHHHHHHHHHHHHHHHhC-----CCCC------C-------ccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027089 119 GEKEFLQAAVDAGEVVWKRG-----LLKR------V-------GICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLY 180 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~-----~~~~------~-------~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~ 180 (228)
+|+++.+.|++..+.+.+.- ..-+ . .+-.+..=.+..+..+|+.|+|++|+++|.++++.++
T Consensus 167 gd~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~ 246 (349)
T 3k7x_A 167 NETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISL 246 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 99999999999887765421 1000 0 1111222256777889999999999999999988887
Q ss_pred HHH
Q 027089 181 DRA 183 (228)
Q Consensus 181 ~~~ 183 (228)
+..
T Consensus 247 ~~f 249 (349)
T 3k7x_A 247 KEL 249 (349)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 14
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.88 E-value=0.1 Score=44.86 Aligned_cols=123 Identities=17% Similarity=0.081 Sum_probs=82.0
Q ss_pred hHHHHHHHHcccC---CCchHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHH
Q 027089 49 LAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQ 125 (228)
Q Consensus 49 ~aGi~~~L~~~~~---~~~~~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~ 125 (228)
.+|.+-+|..++. .+.+.+.+.+.+.++... ..+.|+... .+ -.+| .+++++.+++.++++++++
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~--~~~~~~~~~---~D-D~a~------~~la~~~aye~t~~~~yL~ 115 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR--NGGTLIHDF---YD-DMLW------NALAAYRLYKATGKSIYLE 115 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--TTSSSCCSB---HH-HHHH------HHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc--CCCCCCccC---cc-HHHH------HHHHHHHHHHHHCCchHHH
Confidence 3455566666654 234678888888877642 223343211 11 2344 3479999999999999999
Q ss_pred HHHHHHHHHHHhCCC----------C---CCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 027089 126 AAVDAGEVVWKRGLL----------K---RVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRA 183 (228)
Q Consensus 126 ~~~~~~~~~~~~~~~----------~---~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~ 183 (228)
.++...+.+...... . +.--..+++-.+.++.++++.|+|++|++.|++..+.+.+..
T Consensus 116 ~A~~l~~~l~~~~wd~~~gGGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l 186 (349)
T 3k7x_A 116 DAQLVWQDLVDTGWNDIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVL 186 (349)
T ss_dssp HHHHHHHHHHHHTBCSGGGSCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 999988887322110 0 000111567778888899999999999999999999887753
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=95.30 E-value=0.067 Score=46.35 Aligned_cols=147 Identities=14% Similarity=0.084 Sum_probs=86.4
Q ss_pred CchHHHHHHHHHHHHHhcC--CCCC-CCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCC
Q 027089 63 PDEVEDVKGTLRYMIKNRF--PSGN-YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL 139 (228)
Q Consensus 63 ~~~~~~~~~~l~~l~~~~~--~~g~-w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (228)
+.+++.+.+..+++.. .+ .+|. |... .....-|+.|+.-.+..++.+++.++|+++.+.+.+.++...+.-.
T Consensus 106 ~~yl~~a~~la~~l~~-~~r~~~G~fw~~~----~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~ 180 (373)
T 1nc5_A 106 ERYVKAAKRLRSLYGT-LNRTSEGGFWHKD----GYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTK 180 (373)
T ss_dssp HHHHHHHHHHHGGGGT-SCBCTTSCBCSCT----TSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHHHHh-ccCCCCCCeeccC----CCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhc
Confidence 4467777777777743 44 2343 5431 1223579999877777889999999999999999887766554322
Q ss_pred CCCCccc-c---------------C------hhhHHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHHHhhhhhc
Q 027089 140 LKRVGIC-H---------------G------ISGNTYVFLSLYRLT--------GNVEYLYRAKAFACFLYDRAQKLIAE 189 (228)
Q Consensus 140 ~~~~~lC-H---------------G------~aG~~~~ll~l~~~~--------~~~~~~~~a~~~~~~i~~~~~~~~~~ 189 (228)
....+++ | | .-|+++++.-+.++. ++++|++.++++++.+++...+ ++
T Consensus 181 D~~tGl~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~--~d 258 (373)
T 1nc5_A 181 DAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDK--ET 258 (373)
T ss_dssp CTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCT--TT
T ss_pred CCCCCCEEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCC--CC
Confidence 1122222 3 2 236666665554443 4566888888877777665322 12
Q ss_pred CC----CCCC--CCccccccchHHHHHHHHHcc
Q 027089 190 GK----MHGG--DRPYSLFEGIGGMTHLFLDMI 216 (228)
Q Consensus 190 g~----~~~~--~~~~gl~~G~aGi~~~Ll~l~ 216 (228)
|- +..+ ..++-=-.|+|.+++.+++..
T Consensus 259 G~W~~~ld~~~~~~~~~EsSatA~~ay~l~~g~ 291 (373)
T 1nc5_A 259 GLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGI 291 (373)
T ss_dssp SCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHH
T ss_pred CceeeecCCCCCCCCCccccHHHHHHHHHHHHH
Confidence 21 1101 011111346788888888754
No 16
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=95.12 E-value=0.12 Score=44.66 Aligned_cols=74 Identities=12% Similarity=0.007 Sum_probs=56.8
Q ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCC-CC-----------CccccChhhHHHHHHHHHHHhCCHHHHHHHHHHH
Q 027089 109 LTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLL-KR-----------VGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFA 176 (228)
Q Consensus 109 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~ 176 (228)
.+++.+++.++|+++++.+....+.+.. .+. .+ ..+|.|..-++.+|..+++.|+|++|++.|.+.+
T Consensus 94 ~~ll~lY~~Tgd~~yl~~a~~la~~l~~-~~r~~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~ 172 (373)
T 1nc5_A 94 LILFPLYEQTKDERYVKAAKRLRSLYGT-LNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQE 172 (373)
T ss_dssp GGHHHHHHHHCCHHHHHHHHHHHGGGGT-SCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHh-ccCCCCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 5778889999999999999888777632 111 11 2356677667888999999999999999999887
Q ss_pred HHHHHHH
Q 027089 177 CFLYDRA 183 (228)
Q Consensus 177 ~~i~~~~ 183 (228)
....++.
T Consensus 173 ~~~~~~l 179 (373)
T 1nc5_A 173 SLMRKHT 179 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7776664
No 17
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=94.68 E-value=0.14 Score=44.46 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHH-HHhCCCCC-Ccccc-----Chh---------------hHHHHHHHHHHHhC
Q 027089 107 VTLTLAKAAEVFGEKEFLQAAVDAGEVV-WKRGLLKR-VGICH-----GIS---------------GNTYVFLSLYRLTG 164 (228)
Q Consensus 107 i~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~lCH-----G~a---------------G~~~~ll~l~~~~~ 164 (228)
.++.+++++..++++++.+.++++++.+ .+.+...+ .+++| |.. =.+..++.+|+.|+
T Consensus 252 ~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tg 331 (402)
T 1fp3_A 252 AGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESG 331 (402)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhC
Confidence 4446778888899999999999988887 66543222 23333 321 12677889999999
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q 027089 165 NVEYLYRAKAFACFLYDRAQ 184 (228)
Q Consensus 165 ~~~~~~~a~~~~~~i~~~~~ 184 (228)
|++|++.+.++.+.+..+..
T Consensus 332 d~~yl~~a~~~~~~~~~~f~ 351 (402)
T 1fp3_A 332 DPALLRLFYQVAEYTFRQFR 351 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHTB
T ss_pred CHHHHHHHHHHHHHHHHhCc
Confidence 99999999999888877653
No 18
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=94.49 E-value=0.34 Score=41.59 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=78.2
Q ss_pred HHHHHHcccCCC---chHHHHHHHHHHHHHhcC--CCCCCCC---CCCCCCC-cccccccCchH----HHHHHHHHHHhh
Q 027089 52 IMHVLMDMELKP---DEVEDVKGTLRYMIKNRF--PSGNYPS---SEGSESD-RLVHWCHGAPG----VTLTLAKAAEVF 118 (228)
Q Consensus 52 i~~~L~~~~~~~---~~~~~~~~~l~~l~~~~~--~~g~w~~---~~~~~~~-~~~~WC~G~~G----i~~al~~~~~~~ 118 (228)
.+.++..++..+ .+++.+.++++.+.+... +.|.+.. ...+..+ ..... =.|| .++.++.+.+.+
T Consensus 177 ~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~--~~pgh~~e~a~lL~~~~~~t 254 (388)
T 2gz6_A 177 LANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRL--INPGHGIEAMWFIMDIARRK 254 (388)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTE--ECHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCc--CCCCHHHHHHHHHHHHHHHc
Confidence 344556666543 246778888887765322 2232110 0000000 00001 1234 555688888899
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCC-Ccccc-----Ch---------------hhHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 027089 119 GEKEFLQAAVDAGEVVWKRGLLKR-VGICH-----GI---------------SGNTYVFLSLYRLTGNVEYLYRAKAFAC 177 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~-~~lCH-----G~---------------aG~~~~ll~l~~~~~~~~~~~~a~~~~~ 177 (228)
+++++.+.+++.++...+.+...+ -+++| |. +=.+..++.+|+.|++++|++.+.++.+
T Consensus 255 gd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~ 334 (388)
T 2gz6_A 255 NDSKTINQAVDVVLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHD 334 (388)
T ss_dssp TCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999988887766543222 33333 21 2235556778999999999999999888
Q ss_pred HHHHHHh
Q 027089 178 FLYDRAQ 184 (228)
Q Consensus 178 ~i~~~~~ 184 (228)
++.++..
T Consensus 335 ~~~~~~~ 341 (388)
T 2gz6_A 335 YSWQHFA 341 (388)
T ss_dssp HHHHHHB
T ss_pred HHHHhCc
Confidence 8876653
No 19
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.23 E-value=1.6 Score=38.66 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=99.1
Q ss_pred cccccchHHHHHHHHcccC---CCchHHHHHHHHHHHHHhcC--CCCC-CCCCCCCCCCcccccccCchHHHHHHHHHHH
Q 027089 43 WGAAHGLAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF--PSGN-YPSSEGSESDRLVHWCHGAPGVTLTLAKAAE 116 (228)
Q Consensus 43 ~G~aHG~aGi~~~L~~~~~---~~~~~~~~~~~l~~l~~~~~--~~g~-w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~ 116 (228)
.++.+=.+.++.+|..+++ ...+++.+.+..+++.+... ++|. |... .....-|+.|.--....+..+++
T Consensus 141 ~~~LDD~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~----~~~~q~WiD~lyM~~pfla~~~~ 216 (445)
T 3k11_A 141 PHALDDAGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARNR----PQRNTLWLDDMFMGIPAVAQMSR 216 (445)
T ss_dssp CCSGGGTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBCS----SSTTEEETHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeecC----CCCCceEecchhhHHHHHHHHHH
Confidence 4555556677778877774 24578999999999987432 3454 5321 12245799998667777888889
Q ss_pred hhCcHH--HHHHHHHHHHHHHHh------CC-----------CCCCccccChhhHHHHHHHHHHHh-----CCHHHHHHH
Q 027089 117 VFGEKE--FLQAAVDAGEVVWKR------GL-----------LKRVGICHGISGNTYVFLSLYRLT-----GNVEYLYRA 172 (228)
Q Consensus 117 ~~~~~~--~~~~~~~~~~~~~~~------~~-----------~~~~~lCHG~aG~~~~ll~l~~~~-----~~~~~~~~a 172 (228)
.++|++ +.++|.+-.....+. ++ .....|.-|..=.+..+..+++.+ +.+++++..
T Consensus 217 ~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~ 296 (445)
T 3k11_A 217 YDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYF 296 (445)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHH
T ss_pred HHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHH
Confidence 999998 888887654443321 11 011244444444444444455543 345566666
Q ss_pred HHHHHHHHHHHhhhhhcCC---CCCCCCccccccchHHHHHHHHHccC
Q 027089 173 KAFACFLYDRAQKLIAEGK---MHGGDRPYSLFEGIGGMTHLFLDMIE 217 (228)
Q Consensus 173 ~~~~~~i~~~~~~~~~~g~---~~~~~~~~gl~~G~aGi~~~Ll~l~~ 217 (228)
++.++.+++...+ +|. ......++-=-.|+|.+++.+++..+
T Consensus 297 ~~~a~~l~~~Q~~---~G~W~~vld~~~~y~EsSaTAmfaygllkgvr 341 (445)
T 3k11_A 297 RAHVRGVTALQSG---EGFWHQLLDCNDSYLETSATAIYVYCLAHAIN 341 (445)
T ss_dssp HHHHHHHHTTCCT---TSCEESBTTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC---CCchhhccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 6766666555322 221 11111233235678888888887654
No 20
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=93.08 E-value=0.24 Score=43.41 Aligned_cols=130 Identities=18% Similarity=0.091 Sum_probs=80.6
Q ss_pred HHHHHHcccC--CCchHHHHHHHHHHHHHhcCC--CCCCCCCC-CCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHH
Q 027089 52 IMHVLMDMEL--KPDEVEDVKGTLRYMIKNRFP--SGNYPSSE-GSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQA 126 (228)
Q Consensus 52 i~~~L~~~~~--~~~~~~~~~~~l~~l~~~~~~--~g~w~~~~-~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~ 126 (228)
++++++..+. .+++++.++++++++.+..+. .|.|..+. .+........++.-+=++.++.. ++.++++++++.
T Consensus 56 ~i~~~a~a~~~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~ 134 (421)
T 2zbl_A 56 MLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKL 134 (421)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHH
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHH
Confidence 3444554443 356789999999999875443 25544321 11100002445555666777777 788999999999
Q ss_pred HHHHHHHHHHhC-------CC----CCCcccc---Chhh---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 027089 127 AVDAGEVVWKRG-------LL----KRVGICH---GISG---NTYVFLSLYRLTGNVEYLYRAKAFACFLYDR 182 (228)
Q Consensus 127 ~~~~~~~~~~~~-------~~----~~~~lCH---G~aG---~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~ 182 (228)
+.+..+.+.+.- +. .+..... +..+ .+..++.+++++++++|+++|.++++.+...
T Consensus 135 a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~ 207 (421)
T 2zbl_A 135 LDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHD 207 (421)
T ss_dssp HHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 988877765421 00 0000111 1334 3788889999999999999999887776543
No 21
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=92.86 E-value=0.76 Score=39.13 Aligned_cols=131 Identities=11% Similarity=0.150 Sum_probs=84.9
Q ss_pred hHHHHHHHHcccCC---CchHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC--cccccccCchHHHHHHHHHHHh------
Q 027089 49 LAGIMHVLMDMELK---PDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESD--RLVHWCHGAPGVTLTLAKAAEV------ 117 (228)
Q Consensus 49 ~aGi~~~L~~~~~~---~~~~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~--~~~~WC~G~~Gi~~al~~~~~~------ 117 (228)
.+-++.+|++++.. ..+.+.+.+.++|++.-++++|.|+.-..+... ...-+|....+=++-++.....
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~~ 155 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPFD 155 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTTSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTSC
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCCCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCcc
Confidence 67899999998753 346789999999999989999999854322111 1244666666655555544321
Q ss_pred ---hCc---HHHHHHHHHHHHHHHHhCCC-------------------------CCCccccC-hhhHHHHHHHHHHHhCC
Q 027089 118 ---FGE---KEFLQAAVDAGEVVWKRGLL-------------------------KRVGICHG-ISGNTYVFLSLYRLTGN 165 (228)
Q Consensus 118 ---~~~---~~~~~~~~~~~~~~~~~~~~-------------------------~~~~lCHG-~aG~~~~ll~l~~~~~~ 165 (228)
+.+ ++....++++++.+++.... ..++||-. .+|++.+++.... +
T Consensus 156 ~~~~~~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~~---~ 232 (332)
T 1gxm_A 156 TDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQPQ---T 232 (332)
T ss_dssp STTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSCC---C
T ss_pred ccccccchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCCC---C
Confidence 112 56667788888988764210 12467755 5677777776554 5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 027089 166 VEYLYRAKAFACFLYDR 182 (228)
Q Consensus 166 ~~~~~~a~~~~~~i~~~ 182 (228)
+++++.+.+.++.+...
T Consensus 233 ~~v~~aI~~Av~WL~~~ 249 (332)
T 1gxm_A 233 AEIEQAVRAGVAWFNSP 249 (332)
T ss_dssp HHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 77777777666665444
No 22
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.47 E-value=0.96 Score=40.16 Aligned_cols=85 Identities=11% Similarity=0.042 Sum_probs=60.1
Q ss_pred cccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-----------hCCC-------CCCccccChhhHHHHHHHH
Q 027089 98 VHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWK-----------RGLL-------KRVGICHGISGNTYVFLSL 159 (228)
Q Consensus 98 ~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-------~~~~lCHG~aG~~~~ll~l 159 (228)
.+|.. .-++.++.++++.++|+++.+.+++.++.+.+ .+-. ..+...+=...++..++.+
T Consensus 80 ~~y~~--Gv~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~l 157 (445)
T 3k11_A 80 ASYEW--GVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKL 157 (445)
T ss_dssp TSHHH--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHH
T ss_pred CccCH--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHH
Confidence 35666 44566788889999999999999987765432 1110 0111222235566777899
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHHh
Q 027089 160 YRLTGNVEYLYRAKAFACFLYDRAQ 184 (228)
Q Consensus 160 ~~~~~~~~~~~~a~~~~~~i~~~~~ 184 (228)
|+.+++++|++.|.++++.++++..
T Consensus 158 Y~~T~d~~yl~~a~~~ad~L~~~~p 182 (445)
T 3k11_A 158 RLKDESLPVDGLIQNYFDFIINKEY 182 (445)
T ss_dssp HHHCTTCCCHHHHHHHHHHHHHTSC
T ss_pred HHhcCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999988753
No 23
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=91.80 E-value=2.9 Score=36.45 Aligned_cols=77 Identities=13% Similarity=0.043 Sum_probs=51.9
Q ss_pred HHHHHHHHHhh---Cc--H-HHHHHHHHHHHHHHHhCCCCC--Ccc-----ccCh-----------hhHHHHHHHHHHHh
Q 027089 108 TLTLAKAAEVF---GE--K-EFLQAAVDAGEVVWKRGLLKR--VGI-----CHGI-----------SGNTYVFLSLYRLT 163 (228)
Q Consensus 108 ~~al~~~~~~~---~~--~-~~~~~~~~~~~~~~~~~~~~~--~~l-----CHG~-----------aG~~~~ll~l~~~~ 163 (228)
++.++++++.+ ++ + ++.+.+.+..+.+++.+...+ .++ +.|. +=.+..++.+|+.|
T Consensus 253 ~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~t 332 (421)
T 2zbl_A 253 GRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLT 332 (421)
T ss_dssp HHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHh
Confidence 45677778877 34 4 788888888777655332111 111 2232 33466788899999
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q 027089 164 GNVEYLYRAKAFACFLYDRAQ 184 (228)
Q Consensus 164 ~~~~~~~~a~~~~~~i~~~~~ 184 (228)
++++|++.+.++.+.+.....
T Consensus 333 gd~~yl~~a~~~~~~~~~~~~ 353 (421)
T 2zbl_A 333 DDSQYEEWYQKWWDYCIKYLM 353 (421)
T ss_dssp CCHHHHHHHHHHHHHHHHHTB
T ss_pred CCHHHHHHHHHHHHHHHHhCC
Confidence 999999999998888766544
No 24
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=91.11 E-value=1.2 Score=38.95 Aligned_cols=132 Identities=11% Similarity=0.108 Sum_probs=82.8
Q ss_pred hHHHHHHHHcccCC----C--chHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC--cccccccCchHHHHHHHH-HHHhhC
Q 027089 49 LAGIMHVLMDMELK----P--DEVEDVKGTLRYMIKNRFPSGNYPSSEGSESD--RLVHWCHGAPGVTLTLAK-AAEVFG 119 (228)
Q Consensus 49 ~aGi~~~L~~~~~~----~--~~~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~--~~~~WC~G~~Gi~~al~~-~~~~~~ 119 (228)
.+-++.+|.+++.. . .+.+.+.+.++|++.-++++|.|+.-..+... ...-+|....+-++.++. +..-..
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~ 230 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRD 230 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccC
Confidence 77889999998653 2 35788999999999989999999854322211 123466666666665443 333111
Q ss_pred ---------cHHHHHHHHHHHHHHHHhCCC-------------------------CCCccccC-hhhHHHHHHHHHHHhC
Q 027089 120 ---------EKEFLQAAVDAGEVVWKRGLL-------------------------KRVGICHG-ISGNTYVFLSLYRLTG 164 (228)
Q Consensus 120 ---------~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~lCHG-~aG~~~~ll~l~~~~~ 164 (228)
+++....++++++.+++.... ..+++|-. .+|++.+|+.+. ..
T Consensus 231 ~~~~~~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~LM~~~--~~ 308 (408)
T 1r76_A 231 GFGFVPPAIRTRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIE--AP 308 (408)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSS--SC
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCccccHHHHHHHHHHHccCC--CC
Confidence 246677788888888765321 01244322 344555554444 36
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 027089 165 NVEYLYRAKAFACFLYDR 182 (228)
Q Consensus 165 ~~~~~~~a~~~~~~i~~~ 182 (228)
++++++.+.+..+.+...
T Consensus 309 ~~~~~~aI~~Av~WL~s~ 326 (408)
T 1r76_A 309 SDAVKQAIRGGVAWLNTS 326 (408)
T ss_dssp CHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 778888887777776654
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=89.70 E-value=3.1 Score=35.80 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhCCCCC------------------CccccChhhHHHHHHHHHHHhCC
Q 027089 107 VTLTLAKAAEVF---GEKEFLQAAVDAGEVVWKRGLLKR------------------VGICHGISGNTYVFLSLYRLTGN 165 (228)
Q Consensus 107 i~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------------------~~lCHG~aG~~~~ll~l~~~~~~ 165 (228)
+++++..++..+ +++++++.++++++.+.+...... ...|-+.+=.+..+..+++.|++
T Consensus 61 ~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd 140 (402)
T 1fp3_A 61 QVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAE 140 (402)
T ss_dssp HHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCC
Confidence 355566667766 899999999999988866421100 12233355667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 027089 166 VEYLYRAKAFACFLYDRAQ 184 (228)
Q Consensus 166 ~~~~~~a~~~~~~i~~~~~ 184 (228)
+++++.|.++++.+.....
T Consensus 141 ~~~~~~A~~l~~~~~~~~~ 159 (402)
T 1fp3_A 141 ARYQSEAVDMMDQIVHWVR 159 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999998887753
No 26
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=88.95 E-value=2.6 Score=38.74 Aligned_cols=121 Identities=8% Similarity=0.011 Sum_probs=73.5
Q ss_pred cccchHHHHHHHHcccCC-----C---chHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccccCchH------HHHH
Q 027089 45 AAHGLAGIMHVLMDMELK-----P---DEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPG------VTLT 110 (228)
Q Consensus 45 ~aHG~aGi~~~L~~~~~~-----~---~~~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~~~~~WC~G~~G------i~~a 110 (228)
+.-|.+=.+.+|+..+.. . .+++.++++.+|..++... .+. .|.+| .+++
T Consensus 248 ~~~~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~--y~~--------------~g~~~~~De~~~~WA 311 (586)
T 3h7l_A 248 FRQGGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQ--YLN--------------DGEENIIDEYCALLA 311 (586)
T ss_dssp GGGTHHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHH--HST--------------TSCCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcc--ccC--------------CCCccchhHHHHHHH
Confidence 334544467777777654 2 2478889999998764210 011 12233 4799
Q ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHHhCCC--------C-----CCccccCh-hhHHHH-HHHHHHHhCCHHHHHHHHHH
Q 027089 111 LAKAAEVFGEKEFLQAAVDAGEVVWKRGLL--------K-----RVGICHGI-SGNTYV-FLSLYRLTGNVEYLYRAKAF 175 (228)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~lCHG~-aG~~~~-ll~l~~~~~~~~~~~~a~~~ 175 (228)
.+++++.++++.|++.+....+.+..+-.. . .-.+.|+. .|+..+ |+.+.+.++++.+.+++++.
T Consensus 312 A~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~ 391 (586)
T 3h7l_A 312 SVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCI 391 (586)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHH
Confidence 999999999999999998766665432100 0 12344543 334333 55677888887677777666
Q ss_pred HHHHHH
Q 027089 176 ACFLYD 181 (228)
Q Consensus 176 ~~~i~~ 181 (228)
+..-.+
T Consensus 392 i~~~~d 397 (586)
T 3h7l_A 392 VNRACE 397 (586)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 554444
No 27
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=85.78 E-value=3.9 Score=35.35 Aligned_cols=83 Identities=16% Similarity=0.057 Sum_probs=57.5
Q ss_pred cccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCCC----------------CCccccChhhHHHHHHHHHH
Q 027089 98 VHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLK----------------RVGICHGISGNTYVFLSLYR 161 (228)
Q Consensus 98 ~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lCHG~aG~~~~ll~l~~ 161 (228)
.-|.+|. ++.++..++..++++.+++.|+++++.+.+.-... ....|-..+=.+..+.. +.
T Consensus 50 ~l~~n~r--~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~ 126 (402)
T 3gt5_A 50 HLVSSTR--FVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GL 126 (402)
T ss_dssp EHHHHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HH
T ss_pred hHHHHHH--HHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HH
Confidence 3455543 56666777777899999999999998876531111 11233334445556666 66
Q ss_pred HhCCHHHHHHHHHHHHHHHHHH
Q 027089 162 LTGNVEYLYRAKAFACFLYDRA 183 (228)
Q Consensus 162 ~~~~~~~~~~a~~~~~~i~~~~ 183 (228)
.|+++++++.|+++.+.+....
T Consensus 127 ~tgd~~~l~~A~~l~~~i~~~f 148 (402)
T 3gt5_A 127 KVGIKQAREWMDETWCLLERHF 148 (402)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHT
T ss_pred HhCChhHHHHHHHHHHHHHHHh
Confidence 7999999999999988887774
No 28
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=73.70 E-value=11 Score=34.62 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=50.7
Q ss_pred ccCchHHHHHHHHHHHh-----hCcHHHHHHHHHHHHHHHHhC--CCCCCccccChhhH------HHHHHHHHHHhCCHH
Q 027089 101 CHGAPGVTLTLAKAAEV-----FGEKEFLQAAVDAGEVVWKRG--LLKRVGICHGISGN------TYVFLSLYRLTGNVE 167 (228)
Q Consensus 101 C~G~~Gi~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~lCHG~aG~------~~~ll~l~~~~~~~~ 167 (228)
.-|..=++-++..++.+ ++.+++++.|+++.+.+.+.. +. ..|..|. ++....||+.|+++.
T Consensus 249 ~~~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~-----~~g~~~~~De~~~~WAA~eLy~ATgd~~ 323 (586)
T 3h7l_A 249 RQGGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQYL-----NDGEENIIDEYCALLASVELFKATKETR 323 (586)
T ss_dssp GGTHHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHHHS-----TTSCCCHHHHHHHHHHHHHHHHHHCCHH
T ss_pred CCcHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcccc-----CCCCccchhHHHHHHHHHHHHHHhCCHH
Confidence 33433344444455555 445788888888876664431 11 1144555 577788999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 027089 168 YLYRAKAFACFLYDRA 183 (228)
Q Consensus 168 ~~~~a~~~~~~i~~~~ 183 (228)
|++.|..+.+.+..+.
T Consensus 324 YL~~a~~~a~~l~~~~ 339 (586)
T 3h7l_A 324 YLEESRLWAQRLVARQ 339 (586)
T ss_dssp HHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999998877776553
No 29
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=70.12 E-value=16 Score=32.51 Aligned_cols=120 Identities=17% Similarity=0.141 Sum_probs=65.9
Q ss_pred HHHHHHHHcccCCCchHHHHHHHHHHHHHh-cCCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHH
Q 027089 50 AGIMHVLMDMELKPDEVEDVKGTLRYMIKN-RFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAV 128 (228)
Q Consensus 50 aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~-~~~~g~w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~ 128 (228)
+-++=+|--++.-. ..+..+++.+|+.++ .++ . +...+--.=+.=++=.++-++.+++++.+++.|.
T Consensus 64 ~TlVDsLDTL~IMg-l~~Ef~~A~~~v~~~l~f~------~-----~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~ 131 (478)
T 1nxc_A 64 ATIVDALDTLFIMG-MKTEFQEAKSWIKKYLDFN------V-----NAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAV 131 (478)
T ss_dssp HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCCCC------C-----SSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred chheecccceeecC-CHHHHHHHHHHHHhhcCcc------C-----CCccchhheehhhhhhhhhhhhccCCHHHHHHHH
Confidence 55666666555432 123355666677642 221 0 1111111112223445555666678999999999
Q ss_pred HHHHHHHHh-----CCC-----------CCCccc----cChhhHHH---HHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027089 129 DAGEVVWKR-----GLL-----------KRVGIC----HGISGNTY---VFLSLYRLTGNVEYLYRAKAFACFLYD 181 (228)
Q Consensus 129 ~~~~~~~~~-----~~~-----------~~~~lC----HG~aG~~~---~ll~l~~~~~~~~~~~~a~~~~~~i~~ 181 (228)
...+.++.. ++. .++.+. -..++... =|.++++.|+|++|.+.|+++.+.+.+
T Consensus 132 dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~ 207 (478)
T 1nxc_A 132 ELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNK 207 (478)
T ss_dssp HHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHh
Confidence 988887531 111 011221 11333322 246789999999999999887666554
No 30
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=64.75 E-value=8 Score=32.72 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=45.3
Q ss_pred CChhHHHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCCCC
Q 027089 6 ISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGN 85 (228)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~g~ 85 (228)
++...+++.+++|.+.++...++...+ .+..++.+...+.. +|..+.... ...++++++|+.+.+..+|.
T Consensus 111 ~~~id~~k~~~fL~~~Q~~DGsf~~~~-----~ge~d~~~ty~Al~---~L~llg~~~--~~~~~k~v~~L~s~Q~~dGG 180 (331)
T 3dss_B 111 IHVINVDKVVAYVQSLQKEDGSFAGDI-----WGEIDTRFSFCAVA---TLALLGKLD--AINVEKAIEFVLSCMNFDGG 180 (331)
T ss_dssp GGGSCHHHHHHHHHHTBCTTSCBBSST-----TCCBCHHHHHHHHH---HHHHHTCGG--GSCHHHHHHHHHTTBCTTSC
T ss_pred ccHHHHHHHHHHHhccCCCCCCEeccc-----CCCCchHHHHHHHH---HHHhcCCCC--HHHHHHHHHHHHHhCcCCCC
Confidence 344457889999998877654432111 12333333333233 333332211 12367889999986667888
Q ss_pred CCCCCCCCCCcccccc
Q 027089 86 YPSSEGSESDRLVHWC 101 (228)
Q Consensus 86 w~~~~~~~~~~~~~WC 101 (228)
|......+.+....+|
T Consensus 181 fg~~pg~esh~~~T~~ 196 (331)
T 3dss_B 181 FGCRPGSESHAGQIYC 196 (331)
T ss_dssp BCSSTTCCCCHHHHHH
T ss_pred cCCCCCCCCcHHHHHH
Confidence 8764333333333344
No 31
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=63.65 E-value=19 Score=33.80 Aligned_cols=89 Identities=13% Similarity=0.153 Sum_probs=48.6
Q ss_pred HHHHHHHHcccCC------CchHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCc----------cccc--c----cCchHH
Q 027089 50 AGIMHVLMDMELK------PDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDR----------LVHW--C----HGAPGV 107 (228)
Q Consensus 50 aGi~~~L~~~~~~------~~~~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~~----------~~~W--C----~G~~Gi 107 (228)
+-++.+|..+... ....+.++++++|+.+.+.++|.|..-..+.... ...| + ..++-+
T Consensus 458 A~vl~aL~~~~~~~~~~g~~~~~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~fg~~~~d~s~v~~Ta~v 537 (732)
T 1w6k_A 458 AEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAV 537 (732)
T ss_dssp HHHHHHHHHHHHHCTTCCSCCCHHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSCSSCSSCCCBHHHHHHH
T ss_pred HHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhcccccccCCCcchHHHHH
Confidence 4466666665321 2346789999999998777889886321110000 0011 1 122234
Q ss_pred HHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhC
Q 027089 108 TLTLAKAAEVF---GEKEFLQAAVDAGEVVWKRG 138 (228)
Q Consensus 108 ~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 138 (228)
+.++..+.+.. .+++....++++++.+.+..
T Consensus 538 L~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 538 MQALKYFHKRFPEHRAAEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp HHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhccccccccchhhHHHHHHHHHHHHhhc
Confidence 44555554432 22456677888888887653
No 32
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=60.91 E-value=54 Score=29.22 Aligned_cols=77 Identities=10% Similarity=0.021 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCCC----------CCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHH
Q 027089 107 VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLK----------RVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFA 176 (228)
Q Consensus 107 i~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~ 176 (228)
.++++...+....|+++.+.+...++..-.-.+.. ....| .+=.++.++++|+.|+++.|++.|.++.
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~~~~~~~~~~~~--sp~lL~allEL~~atq~~~~l~lA~~~g 455 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGKEVKVNMDTTNS--DPYALFALLDLYHASQVADYRKLAEKIG 455 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTBSCEECTTCCCC--CHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCcccccccCCCCc--CHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 67888888999999999888876544321000110 11111 3556888999999999999999999999
Q ss_pred HHHHHHHhh
Q 027089 177 CFLYDRAQK 185 (228)
Q Consensus 177 ~~i~~~~~~ 185 (228)
+.++++.-+
T Consensus 456 ~nl~~~~~~ 464 (543)
T 2v8i_A 456 DNIIKIRYI 464 (543)
T ss_dssp HHHHHHHEE
T ss_pred HHHHHHhhc
Confidence 999876543
No 33
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=58.75 E-value=47 Score=30.45 Aligned_cols=71 Identities=11% Similarity=0.194 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 027089 8 TAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYP 87 (228)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~g~w~ 87 (228)
.+.+++.++.|++.+....++ .+.-...+.++.+-++.+|..+.... ..+.++++++|+.+.+..+|.|.
T Consensus 465 ~~~i~rai~~L~~~Q~~DGsw---------~g~wg~~~~y~Ta~~l~aL~~~g~~~-~~~~i~rav~~L~s~Q~~DGgWg 534 (631)
T 2sqc_A 465 WKVIRRAVEYLKREQKPDGSW---------FGRWGVNYLYGTGAVVSALKAVGIDT-REPYIQKALDWVEQHQNPDGGWG 534 (631)
T ss_dssp SHHHHHHHHHHHHHCCTTSCC---------CCSSBSSHHHHHHHHHHHHHHTTCCT-TSHHHHHHHHHHHHTCCTTSCCC
T ss_pred HHHHHHHHHHHHHhcCCCCCC---------CCCCCCCchHHHHHHHHHHHHhCCcc-cHHHHHHHHHHHHHhCcCCCCcC
Confidence 345667777777665443221 11222345678888888888775432 33568899999998777889995
Q ss_pred C
Q 027089 88 S 88 (228)
Q Consensus 88 ~ 88 (228)
.
T Consensus 535 ~ 535 (631)
T 2sqc_A 535 E 535 (631)
T ss_dssp C
T ss_pred C
Confidence 4
No 34
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=57.50 E-value=32 Score=31.19 Aligned_cols=74 Identities=23% Similarity=0.268 Sum_probs=47.0
Q ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHH-----hCCC-CCCccccC------------hhhH---HHHHHHHHHHhCCHH
Q 027089 109 LTLAKAAEVFGEKEFLQAAVDAGEVVWK-----RGLL-KRVGICHG------------ISGN---TYVFLSLYRLTGNVE 167 (228)
Q Consensus 109 ~al~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~lCHG------------~aG~---~~~ll~l~~~~~~~~ 167 (228)
=.++-++.+++++.+++.|....+.++. +++. ....+=+| .+++ ..=|.++++.|+|++
T Consensus 176 GGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~ 255 (538)
T 1x9d_A 176 GGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKK 255 (538)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTH
T ss_pred hhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcH
Confidence 3455555667899999999998888753 1111 00111111 2222 233567899999999
Q ss_pred HHHHHHHHHHHHHHH
Q 027089 168 YLYRAKAFACFLYDR 182 (228)
Q Consensus 168 ~~~~a~~~~~~i~~~ 182 (228)
|.+.|+++.+.+.+.
T Consensus 256 Y~~~a~r~~~~l~~~ 270 (538)
T 1x9d_A 256 FQEAVEKVTQHIHGL 270 (538)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999987777554
No 35
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=54.58 E-value=14 Score=32.85 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 151 GNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 151 G~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
=.++.+.++|++|+|+.|++.+.++++.+..+.+.
T Consensus 374 E~iES~fylyR~TgD~~yr~~gw~~f~ai~k~~rt 408 (475)
T 2ri9_A 374 EVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCRT 408 (475)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcc
Confidence 46899999999999999999999999888887654
No 36
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=53.63 E-value=15 Score=32.82 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 152 NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 152 ~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
.++.+.++|++|+|++|++.+.++++.+..+.+.
T Consensus 373 ~iES~fylyR~TgD~~yre~gw~~f~ai~k~~r~ 406 (478)
T 1nxc_A 373 VIETYMYMWRLTHDPKYRTWAWEAVEALESHCRV 406 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhc
Confidence 3899999999999999999999999888887654
No 37
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=53.17 E-value=15 Score=32.94 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 152 NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 152 ~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
.++.+.++|++|+|+.|++.+.++++.+..+.+.
T Consensus 394 ~iES~fylyR~TgD~~yre~gw~if~ai~k~~r~ 427 (503)
T 1hcu_A 394 TLESLYYAYRVTGDSKWQDLAWEALSAIEDACRA 427 (503)
T ss_dssp HHHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 6899999999999999999999999998888765
No 38
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=52.94 E-value=37 Score=30.53 Aligned_cols=65 Identities=22% Similarity=0.206 Sum_probs=42.4
Q ss_pred CcHHHHHHHHHHHHHHHH----hC--CC-C----------CCccccC---hhhH---HHHHHHHHHHhCCHHHHHHHHHH
Q 027089 119 GEKEFLQAAVDAGEVVWK----RG--LL-K----------RVGICHG---ISGN---TYVFLSLYRLTGNVEYLYRAKAF 175 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~----~~--~~-~----------~~~lCHG---~aG~---~~~ll~l~~~~~~~~~~~~a~~~ 175 (228)
+++.+++.|....+.++. +. +. . ......| .|+. ..=|.++++.|+|++|.+.|+++
T Consensus 122 ~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~ 201 (511)
T 1dl2_A 122 NKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERV 201 (511)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHH
Confidence 678999999988888752 21 11 0 0111112 2222 23356789999999999999999
Q ss_pred HHHHHHHH
Q 027089 176 ACFLYDRA 183 (228)
Q Consensus 176 ~~~i~~~~ 183 (228)
.+.+.+..
T Consensus 202 ~~~l~~~~ 209 (511)
T 1dl2_A 202 YEPLYKNN 209 (511)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 88887653
No 39
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=52.82 E-value=15 Score=33.01 Aligned_cols=34 Identities=12% Similarity=0.223 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 152 NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 152 ~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
.++.+.++|++|+|+.|++.+.++++.+..+.+.
T Consensus 398 ~iES~fylyR~TgD~~yre~gw~~f~ai~k~~rt 431 (511)
T 1dl2_A 398 TVESIMFMYHLSHDHKYREWGAEIATSFFENTCV 431 (511)
T ss_dssp HHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999888765
No 40
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=52.37 E-value=38 Score=28.57 Aligned_cols=116 Identities=15% Similarity=0.127 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHhcC--CCCC--CCCCCCCC--CCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCC
Q 027089 66 VEDVKGTLRYMIKNRF--PSGN--YPSSEGSE--SDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL 139 (228)
Q Consensus 66 ~~~~~~~l~~l~~~~~--~~g~--w~~~~~~~--~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (228)
.+...++++|..++.. +++. |.-..... .....+=-.|..=|+++|+++.+.-+++.|.+++...++.+++...
T Consensus 64 ~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~~~~~v~d~n~AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v 143 (334)
T 1wzz_A 64 LASFQSMWMWARTNLQHTNDKLFSWRFLKGHQPPVPDKNNATDGDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMT 143 (334)
T ss_dssp HHHHHHHHHHHHHHTBCSSSSCBCSEEETTSSSSSCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3567788888876432 2332 53221110 0011122345555999999999999999999999999888876432
Q ss_pred CCC---CccccChhh--------------HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027089 140 LKR---VGICHGISG--------------NTYVFLSLYRLTGNVEYLYRAKAFACFLYD 181 (228)
Q Consensus 140 ~~~---~~lCHG~aG--------------~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~ 181 (228)
... ..|.=|.-| ...+|..+++.+++..+.+.+..-.+.+.+
T Consensus 144 ~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~~~~~~~~ll~~ 202 (334)
T 1wzz_A 144 MKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDLTADPRWRQVMEDGIRLVSA 202 (334)
T ss_dssp EEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHccCCchHHHHHHHHHHHHHH
Confidence 110 122222222 235667778888888888877666555433
No 41
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=49.71 E-value=1.3e+02 Score=26.14 Aligned_cols=119 Identities=8% Similarity=-0.011 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCC-------CCCc----------cccc----------------ccCchHHHHHHHH
Q 027089 67 EDVKGTLRYMIKNRFPSGNYPSSEGS-------ESDR----------LVHW----------------CHGAPGVTLTLAK 113 (228)
Q Consensus 67 ~~~~~~l~~l~~~~~~~g~w~~~~~~-------~~~~----------~~~W----------------C~G~~Gi~~al~~ 113 (228)
+.++++.+.++..+.++|.|+....- +... ..++ +..++-.+.++..
T Consensus 81 ~~A~~iAd~ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~r 160 (408)
T 1r76_A 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHH
Confidence 45788888888878889999864320 0000 0111 2346677888888
Q ss_pred HHHh-h--CcHHHHHHHHHHHHHHHHhCCC---------------CCCccccChhh-HHHHHHHHHHHhC-----C----
Q 027089 114 AAEV-F--GEKEFLQAAVDAGEVVWKRGLL---------------KRVGICHGISG-NTYVFLSLYRLTG-----N---- 165 (228)
Q Consensus 114 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~---------------~~~~lCHG~aG-~~~~ll~l~~~~~-----~---- 165 (228)
+... + +++++++.+.++++.++..... ...++|-...+ ++.+|..+..-.. +
T Consensus 161 v~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~~~~~~~~~~~ 240 (408)
T 1r76_A 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccCcccccchhhh
Confidence 8776 5 7899999999999998764321 12445555444 4444555554212 2
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 027089 166 VEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 166 ~~~~~~a~~~~~~i~~~~~~ 185 (228)
++....+.+.+++|+.....
T Consensus 241 ~~~~~av~Rgi~~Ll~~Qe~ 260 (408)
T 1r76_A 241 TRALEATNAAIHCIVETQVV 260 (408)
T ss_dssp HHHHHHHHHHHHHHHHHSCE
T ss_pred hhHHHHHHHHHHHHHHhhcc
Confidence 24555666677777766443
No 42
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=48.55 E-value=18 Score=32.76 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 151 GNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 151 G~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
=.++.+.++|++|+|+.|++.+.++++.+..+.+.
T Consensus 438 E~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt 472 (538)
T 1x9d_A 438 ETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRV 472 (538)
T ss_dssp HHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 35899999999999999999999999888887664
No 43
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=45.15 E-value=29 Score=32.60 Aligned_cols=45 Identities=9% Similarity=0.132 Sum_probs=33.2
Q ss_pred ccccchHHHHHHHHcccCCCch---HHHHHHHHHHHHHhcCCCCCCCC
Q 027089 44 GAAHGLAGIMHVLMDMELKPDE---VEDVKGTLRYMIKNRFPSGNYPS 88 (228)
Q Consensus 44 G~aHG~aGi~~~L~~~~~~~~~---~~~~~~~l~~l~~~~~~~g~w~~ 88 (228)
.+.||.+-++.+|..+...... .+.++++++|+.+.+..+|.|..
T Consensus 584 ~~~Y~T~~al~AL~~aG~~~~~~~~~~~i~rav~~Lls~Q~~DGGWge 631 (732)
T 1w6k_A 584 CFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMADGGWGE 631 (732)
T ss_dssp SHHHHHHHHHHHHHHTTCCCBTTBCCHHHHHHHHHHHTTCCTTSCCCB
T ss_pred ccchHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHhcccCCCCCC
Confidence 4566777788888877654222 26789999999987778888864
No 44
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=44.28 E-value=1.4e+02 Score=25.02 Aligned_cols=41 Identities=15% Similarity=0.260 Sum_probs=27.0
Q ss_pred hHHHHHHHHcccCC-CchHHHHHHHHHHHHHhcCCCCCCCCC
Q 027089 49 LAGIMHVLMDMELK-PDEVEDVKGTLRYMIKNRFPSGNYPSS 89 (228)
Q Consensus 49 ~aGi~~~L~~~~~~-~~~~~~~~~~l~~l~~~~~~~g~w~~~ 89 (228)
.+=++-+|..+.+. ....+.++++++|+.+.+..+|.|...
T Consensus 123 Ta~v~~~l~~a~~~~~v~~~~i~~a~~~L~~~Q~~dG~~~~~ 164 (367)
T 1hzf_A 123 TAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQQQADGSFQDP 164 (367)
T ss_dssp HHHHHHHHHHHGGGTCCCHHHHHHHHHHHGGGBCTTSCBCCS
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccCCCcccc
Confidence 44455555555432 223567899999998866788888754
No 45
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=44.26 E-value=67 Score=27.52 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=23.0
Q ss_pred HHHHHHHHHhcCCCCCCCCC-CCCCCCcccccc
Q 027089 70 KGTLRYMIKNRFPSGNYPSS-EGSESDRLVHWC 101 (228)
Q Consensus 70 ~~~l~~l~~~~~~~g~w~~~-~~~~~~~~~~WC 101 (228)
+++++|+.+.+.++|.|... +..+++.+..||
T Consensus 145 ~~~~~fL~~~Q~~DGSf~g~~~wGe~DirftY~ 177 (377)
T 1n4q_B 145 EACLAGLRALQLEDGSFCAVPEGSENDMRFVYC 177 (377)
T ss_dssp HHHHHHHHHHBCTTSCBCSSTTCCCCBHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeeeccCCCcchhHHHHH
Confidence 67889998878889998754 334456666666
No 46
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=43.80 E-value=56 Score=29.95 Aligned_cols=45 Identities=9% Similarity=0.122 Sum_probs=32.8
Q ss_pred ccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCCCCCCCCC
Q 027089 44 GAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSE 90 (228)
Q Consensus 44 G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~g~w~~~~ 90 (228)
|=.--.++.+.++..+..... +..++.++|+.+.+.++|.|.-..
T Consensus 38 ~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~yl~~~Q~~dGgW~~~~ 82 (631)
T 2sqc_A 38 SNVTMEAEYVLLCHILDRVDR--DRMEKIRRYLLHEQREDGTWALYP 82 (631)
T ss_dssp CCTHHHHHHHHHHHHTTCCCH--HHHHHHHHHHHHHSCTTSCCCSST
T ss_pred CcchhhHHHHHHHHHhCCCCH--HHHHHHHHHHHHhcCCCCCccCCC
Confidence 444467888888877754433 678889999998787899997543
No 47
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=42.93 E-value=73 Score=27.90 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=48.2
Q ss_pred CChhHHHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHHcccCCCch-HHHHHHHHHHHHHhcCCCC
Q 027089 6 ISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDE-VEDVKGTLRYMIKNRFPSG 84 (228)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~-~~~~~~~l~~l~~~~~~~g 84 (228)
++.+.++++++.|...+.....+...+ |. . .-.-+....+.+|..+...... ...++++++|+.+.+..+|
T Consensus 118 ~~~~~~~r~v~~l~s~Q~~dGGf~g~~----~~-~---~~i~~T~~Al~aL~~lg~~~~~~~i~i~kav~~L~s~Q~~DG 189 (437)
T 2h6f_B 118 IPQIVATDVCQFLELCQSPEGGFGGGP----GQ-Y---PHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDG 189 (437)
T ss_dssp CCHHHHHHHHHHHHHHBCTTSSBBSST----TC-C---BCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHHHHTTBCTTS
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCCcc----CC-C---cchhHHHHHHHHHHHhCCcccccchHHHHHHHHHHHhCCCCC
Confidence 567788899999988865443221111 11 1 1112344555555555432000 1126789999998777889
Q ss_pred CCCCCCCCCCCcccccc
Q 027089 85 NYPSSEGSESDRLVHWC 101 (228)
Q Consensus 85 ~w~~~~~~~~~~~~~WC 101 (228)
.|......+.+.+..||
T Consensus 190 sf~~~~~Ge~d~~~ty~ 206 (437)
T 2h6f_B 190 SFLMHVGGEVDVRSAYC 206 (437)
T ss_dssp CBBSSTTCCBSHHHHHH
T ss_pred CeeecCCCCccchhHHH
Confidence 88754323334444444
No 48
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=42.27 E-value=1.6e+02 Score=25.31 Aligned_cols=118 Identities=16% Similarity=0.196 Sum_probs=0.0
Q ss_pred ChhHHHHHHHHHHHhc------HHhhhcCCCCCceee-cCccccccccchH-HHHHHHHcccCCCchHHHHHHHHHHHHH
Q 027089 7 STAQMRAVVDEIIKAG------RRLANRGRCPLMYEW-HGKKYWGAAHGLA-GIMHVLMDMELKPDEVEDVKGTLRYMIK 78 (228)
Q Consensus 7 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~G~aHG~a-Gi~~~L~~~~~~~~~~~~~~~~l~~l~~ 78 (228)
+.+.|++.++..-+.- +...-..+.+..++. .+...+- +-|.+ |.+.++.. +..+...++++|..+
T Consensus 24 ~~~~~~~~~~~~~~~wf~g~~~k~~y~~~~~~~GrviD~~n~~v~-SEGqgYGMl~Av~~-----~d~~~FD~l~~wt~~ 97 (396)
T 1wu4_A 24 SEAEIQERVKDTWEQLFGDNPETKIYYEVGDDLGYLLDTGNLDVR-TEGMSYGMMMAVQM-----DRKDIFDRIWNWTMK 97 (396)
T ss_dssp CHHHHHHHHHHHHHHHHSSCC--CCEEEETTTEEEECBTTTTBEE-HHHHHHHHHHHHHT-----TCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCcchheeEecCCCCeEEEECCCCCcc-cHHHHHHHHHHHHc-----CCHHHHHHHHHHHHH
Q ss_pred hcCCCCCCCCCCCCCCCcccccccCchH--------------HHHHHHHHHHhhC-----cHHHHHHHHHHHHHHHHh
Q 027089 79 NRFPSGNYPSSEGSESDRLVHWCHGAPG--------------VTLTLAKAAEVFG-----EKEFLQAAVDAGEVVWKR 137 (228)
Q Consensus 79 ~~~~~g~w~~~~~~~~~~~~~WC~G~~G--------------i~~al~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 137 (228)
+.. ......+..++|..+..| |+++|+++.+.-+ +++|.+++...++.+++.
T Consensus 98 ~l~-------~~~~~~~~L~aW~~~~~~~~~~~n~AtDgDl~IA~ALl~A~~~Wg~~~g~~~~Y~~~A~~il~~i~~~ 168 (396)
T 1wu4_A 98 NMY-------MTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTCVHN 168 (396)
T ss_dssp HTB-------CCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHHHHT
T ss_pred Hhc-------cCCcccCCCceEEECCCCCcCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHh
No 49
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=40.41 E-value=19 Score=30.39 Aligned_cols=83 Identities=8% Similarity=0.040 Sum_probs=44.9
Q ss_pred ChhHHHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccch--HHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCCC
Q 027089 7 STAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGL--AGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSG 84 (228)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~--aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~g 84 (228)
+...+++.+++|..++.... .|. +. .-.-+|+. .-.+.+|..+.... ...+.++++|+.+.+.++|
T Consensus 160 ~~~~~~k~v~~L~s~Q~~dG-------Gfg--~~-pg~esh~~~T~~al~aL~llg~~~--~~~~~~~~~wL~~~Q~~dG 227 (331)
T 3dss_B 160 DAINVEKAIEFVLSCMNFDG-------GFG--CR-PGSESHAGQIYCCTGFLAITSQLH--QVNSDLLGWWLCERQLPSG 227 (331)
T ss_dssp GGSCHHHHHHHHHTTBCTTS-------CBC--SS-TTCCCCHHHHHHHHHHHHHTTCGG--GSCHHHHHHHHHTTBCTTS
T ss_pred CHHHHHHHHHHHHHhCcCCC-------CcC--CC-CCCCCcHHHHHHHHHHHHhccccc--hhhHHHHHHHHHHhCCCCC
Confidence 34567788888887754332 121 11 11345652 23344444443321 1126778899998777888
Q ss_pred CCCCCCCCCCCcccccc
Q 027089 85 NYPSSEGSESDRLVHWC 101 (228)
Q Consensus 85 ~w~~~~~~~~~~~~~WC 101 (228)
.|........+..++||
T Consensus 228 Gf~gr~~k~~D~cys~w 244 (331)
T 3dss_B 228 GLNGRPEKLPDVCYSWW 244 (331)
T ss_dssp CBCSSTTCCCCHHHHHH
T ss_pred CcCCCCCCCCcchhHHH
Confidence 88754433345555665
No 50
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=35.43 E-value=1.3e+02 Score=28.08 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=17.0
Q ss_pred CCCCChhHHHHHHHHHHHhcHHhh
Q 027089 3 KDTISTAQMRAVVDEIIKAGRRLA 26 (228)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~ 26 (228)
.|.|+++....+.+.|.+.+....
T Consensus 271 ~~~L~~~~r~~i~~~l~~~~~~~~ 294 (776)
T 3a0o_A 271 YDHLSEDERRTVRSVLLERTREVA 294 (776)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHH
Confidence 367888887777777777755543
No 51
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=35.09 E-value=1.7e+02 Score=26.21 Aligned_cols=24 Identities=17% Similarity=0.301 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Q 027089 152 NTYVFLSLYRLTGNVEYLYRAKAF 175 (228)
Q Consensus 152 ~~~~ll~l~~~~~~~~~~~~a~~~ 175 (228)
.++....||+.|+|+.|++.+.+.
T Consensus 309 l~wAA~~Ly~aTgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 309 LLWASCALLRMTGDSAWARVCEPL 332 (537)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHh
Confidence 577888899999999999988764
No 52
>1nov_D Nodamura virus coat proteins; insect virus, icosahedral VIRU; 3.50A {Nodamura virus}
Probab=33.29 E-value=37 Score=19.55 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=27.0
Q ss_pred HHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHH
Q 027089 13 AVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLM 57 (228)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~ 57 (228)
+=|+.|+|..-..++.++.|+. ..|.|+.|+.-.+.
T Consensus 5 ErVk~ilks~l~~aS~iPGPVG---------~~asGi~gl~~l~~ 40 (44)
T 1nov_D 5 ERVRSILKSGLNFASTIPGPVG---------VAATGIKGIIETIG 40 (44)
T ss_pred HHHHHHHHHHHHHHhcCCCchh---------HHHHhHHHHHHHHH
Confidence 5578899998888888888876 56777777665443
No 53
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=33.22 E-value=2.4e+02 Score=24.43 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCCCCCccccC--hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 027089 107 VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHG--ISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDR 182 (228)
Q Consensus 107 i~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lCHG--~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~ 182 (228)
.+++-..+++.++++.|++.++......-... ....+|=. .+|.. +.+.++++++.|++.++..++.++..
T Consensus 215 ~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~~~--~~~~~~Wd~~~~g~~---~lla~~~~~~~~~~~~~~~~~~~~~~ 287 (433)
T 1ks8_A 215 LVWAAAWLYRATNDNTYLNTAESLYDEFGLQN--WGGGLNWDSKVSGVQ---VLLAKLTNKQAYKDTVQSYVNYLINN 287 (433)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHTTGGG--SCCCCCSSCCHHHHH---HHHHHHHCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCcCc--CcCCcCccchhhHHH---HHHhhccChHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999876543321110 11222322 24432 22446678888988888887777643
No 54
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=32.33 E-value=2.3e+02 Score=24.06 Aligned_cols=71 Identities=10% Similarity=0.012 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 027089 10 QMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSS 89 (228)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~g~w~~~ 89 (228)
...+++++|.+.++...++...+ . ++..++=+..++..++.++... ....++++++|+.+.+..+|.|-..
T Consensus 143 d~~~~~~fL~~~Q~~DGSf~g~~-~---wGe~DirftY~Al~~l~llg~~-----~~~~v~ka~~fL~scQn~DGGfGe~ 213 (377)
T 1n4q_B 143 DKEACLAGLRALQLEDGSFCAVP-E---GSENDMRFVYCASCICYMLNNW-----SGMDMKKAISYIRRSMSYDNGLAQG 213 (377)
T ss_dssp CHHHHHHHHHHHBCTTSCBCSST-T---CCCCBHHHHHHHHHHHHHTTCG-----GGSCHHHHHHHHHHTBCTTSSBBSS
T ss_pred hHHHHHHHHHHhcCCCCCeeecc-C---CCcchhHHHHHHHHHHHHhcCC-----ChHHHHHHHHHHHHhcCCCCCCCCC
Confidence 34678888888877665443221 1 2333444444444444443331 1123788999999866678888653
No 55
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=31.73 E-value=2.3e+02 Score=23.81 Aligned_cols=144 Identities=8% Similarity=-0.030 Sum_probs=79.7
Q ss_pred HHHHHHhcCCCCCCCCCCCC--C---C---CcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCC----
Q 027089 73 LRYMIKNRFPSGNYPSSEGS--E---S---DRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLL---- 140 (228)
Q Consensus 73 l~~l~~~~~~~g~w~~~~~~--~---~---~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 140 (228)
.+.++..+.++|.|+....- . . ....-=+..++-.+.++..+....+++++++.+.++++.++.....
T Consensus 37 Ad~~l~~Q~~~GGW~kn~d~~~~~~~~~~~~~~t~DnddTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGW 116 (332)
T 1gxm_A 37 ADVVLSYQQNNGGWPKNLDYNSVGNGGGGNESGTIDNGATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGAL 116 (332)
T ss_dssp HHHHHHTCCTTSCCCSCCCTTTCCCCCCCCSCEECGGGTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTTSCC
T ss_pred HHHHHHcCcCCCCCCcceecccccccCCCCCCCCccCccHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCCCCc
Confidence 45555557789999864321 0 0 0111125557778888888888788899999999999998764221
Q ss_pred -----------CCCccccChhh-HHHHHHHHHHH--------hCC---HHHHHHHHHHHHHHHHHHhhhh-hcC------
Q 027089 141 -----------KRVGICHGISG-NTYVFLSLYRL--------TGN---VEYLYRAKAFACFLYDRAQKLI-AEG------ 190 (228)
Q Consensus 141 -----------~~~~lCHG~aG-~~~~ll~l~~~--------~~~---~~~~~~a~~~~~~i~~~~~~~~-~~g------ 190 (228)
....+|-...+ ++++|..+.+. +-+ ++....+++..++|++...... +.+
T Consensus 117 pqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qy 196 (332)
T 1gxm_A 117 PQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQH 196 (332)
T ss_dssp BSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEE
T ss_pred cccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCccccccccchhhhhHHHHHHHHHHHHHhhCccCCCcCeecccc
Confidence 12455555443 44444444321 111 3444556666666666543321 111
Q ss_pred ---CC-C---CCCCccccccc-hHHHHHHHHHcc
Q 027089 191 ---KM-H---GGDRPYSLFEG-IGGMTHLFLDMI 216 (228)
Q Consensus 191 ---~~-~---~~~~~~gl~~G-~aGi~~~Ll~l~ 216 (228)
.. | ...+.++|+.. ++|+..+|+...
T Consensus 197 dygT~~Pa~ARayE~psL~~~es~giv~~LM~~~ 230 (332)
T 1gxm_A 197 GALDYQPKKARAYELESLSGSESVGVLAFLMTQP 230 (332)
T ss_dssp CTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSC
T ss_pred ccccccccccccccccchhHHHHHHHHHHhccCC
Confidence 11 1 12234566666 457777777654
No 56
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=30.05 E-value=2e+02 Score=24.57 Aligned_cols=117 Identities=11% Similarity=0.103 Sum_probs=66.5
Q ss_pred CchHHHHHHHHHHHHHhcC--CCCC--CCCCCCCC-CCcccccccCchHHHHHHHHHHHhhCcH---HHHHHHHHHHHHH
Q 027089 63 PDEVEDVKGTLRYMIKNRF--PSGN--YPSSEGSE-SDRLVHWCHGAPGVTLTLAKAAEVFGEK---EFLQAAVDAGEVV 134 (228)
Q Consensus 63 ~~~~~~~~~~l~~l~~~~~--~~g~--w~~~~~~~-~~~~~~WC~G~~Gi~~al~~~~~~~~~~---~~~~~~~~~~~~~ 134 (228)
++..+...++++|..++.. .++. |....... .....+=-.|..=|+++|+++.+.-+++ +|.+++...++.+
T Consensus 91 ~~d~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~g~~~~d~n~AtDgDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i 170 (386)
T 1v5d_A 91 SNAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYLKEAQDMITKG 170 (386)
T ss_dssp TTHHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCcCCCCCCCCHHHHHHHHHHHHHHHHcCCCchHhHHHHHHHHHHHH
Confidence 3556778888988876433 2221 44211000 0001112234455899999999998876 8999999888776
Q ss_pred HHhCCC-CC------Ccccc-C---hhh--HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027089 135 WKRGLL-KR------VGICH-G---ISG--NTYVFLSLYRLTGNVEYLYRAKAFACFL 179 (228)
Q Consensus 135 ~~~~~~-~~------~~lCH-G---~aG--~~~~ll~l~~~~~~~~~~~~a~~~~~~i 179 (228)
++.... .+ +.... + +.. ....|..+++.+++..+.+.+..-.+.+
T Consensus 171 ~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~l~~f~~~~~~~~W~~v~~~~~~~l 228 (386)
T 1v5d_A 171 IKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVY 228 (386)
T ss_dssp HHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred HHhcccCCCCeeeecccCCCCCCeechhhccHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 653211 00 00000 0 111 1255777888898888887776655444
No 57
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=28.33 E-value=81 Score=26.83 Aligned_cols=38 Identities=16% Similarity=0.017 Sum_probs=33.1
Q ss_pred ChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 148 GISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 148 G~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
|+.=++++|+.+.+.-+++.|.+.|+++...|+.....
T Consensus 115 gDl~IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~~~~ 152 (350)
T 3ren_A 115 DELRIIKALLLANNRWNSFYYKFYAINIANSLLKHAEE 152 (350)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHccc
Confidence 66668899999999999999999999999999887543
No 58
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=25.71 E-value=1e+02 Score=28.99 Aligned_cols=163 Identities=10% Similarity=-0.100 Sum_probs=0.0
Q ss_pred CCCChhHHHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhc---
Q 027089 4 DTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNR--- 80 (228)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~--- 80 (228)
|.||+++-.++-+.|++.+.....+-.....|......|....-. .=++.+|+.+...++..+.+...+.......
T Consensus 143 d~Ls~eeR~~Ir~~I~~~~~~p~~~w~~~~~~~~~~~~NWn~vc~-Gll~aALAL~~d~pe~~~~~~~~~~~~~~~l~~~ 221 (749)
T 3e7j_A 143 DQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGAASEWMIMR-DLLSVGIAIYDEFPEMYNLAAGRFFKEHLVARNW 221 (749)
T ss_dssp GGCCHHHHHHHHHHHHHHHTTSTTCSSSCSSCSSSSGGGTHHHHT-HHHHHHHHTTTTCTHHHHHHHHHHHHTHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHhccccccccccCCChHHHHHH-HHHHHHHHHcCCcHHHHHHHHHHHHHhhhhhhcc
Q ss_pred -CCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCCCCCccccChhh--------
Q 027089 81 -FPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISG-------- 151 (228)
Q Consensus 81 -~~~g~w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lCHG~aG-------- 151 (228)
.++|.|... ...|.+|+.-.+..+..+...++.+-+...+++..+............+..|+++
T Consensus 222 ~~~DG~~~EG-------~~Yw~yg~~~l~~~~~aL~~~tg~d~~~p~l~k~a~y~l~~~~p~g~~~nfgDs~~~~~~p~~ 294 (749)
T 3e7j_A 222 FYPSHNYHQG-------MSALNVRFTNDLFALWILDRMGAGNVFNPGQQFILYDAIYKRRPDGQILAGGDVDYSRKKPKY 294 (749)
T ss_dssp HGGGCCCSSH-------HHHHHHHHHHHHHHHHHHHHHTTCCCSCGGGGGTTHHHHHTBCTTSCBCCCSSCCCCSSSCCC
T ss_pred cCCCCCcccc-------HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHeeCCCCceeecCCCCcccCcccc
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Q 027089 152 NTYVFLSLYRLTGNVEYLYRAKA 174 (228)
Q Consensus 152 ~~~~ll~l~~~~~~~~~~~~a~~ 174 (228)
....+..+++.++|+.+...+.+
T Consensus 295 ~~~al~~~a~~~~dp~l~~~~~~ 317 (749)
T 3e7j_A 295 YTMPALLAGSYYKDEYLNYEFLK 317 (749)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHT
T ss_pred chHHHHHHHHhhCCHHHHHHHHh
No 59
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=25.71 E-value=94 Score=26.05 Aligned_cols=38 Identities=11% Similarity=-0.095 Sum_probs=31.9
Q ss_pred ChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Q 027089 148 GISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQK 185 (228)
Q Consensus 148 G~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~~ 185 (228)
|..=+++.|+.+.+.-+++.|.+.|+++++.|+.....
T Consensus 107 gDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~ 144 (334)
T 1wzz_A 107 GDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTM 144 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 44447888999999999999999999999998887543
No 60
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=25.50 E-value=35 Score=29.97 Aligned_cols=70 Identities=9% Similarity=-0.048 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHHHcccCCCchHHHHHHHHHHHHHhcCCCCCCCCCC
Q 027089 11 MRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSE 90 (228)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~l~~l~~~~~~~g~w~~~~ 90 (228)
+++.+++|.+.++....+...+ .+..++.+.... +.+|..+.... .+.++++++|+.+.+..+|.|....
T Consensus 174 i~kav~~L~s~Q~~DGsf~~~~-----~Ge~d~~~ty~A---~~~L~llg~~~--~~~v~k~~~~L~s~Q~~DGGwg~~p 243 (437)
T 2h6f_B 174 REKLLQYLYSLKQPDGSFLMHV-----GGEVDVRSAYCA---ASVASLTNIIT--PDLFEGTAEWIARCQNWEGGIGGVP 243 (437)
T ss_dssp HHHHHHHHHTTBCTTSCBBSST-----TCCBSHHHHHHH---HHHHHHTTCCC--TTTTTTHHHHHHHHBCTTSSBCSST
T ss_pred HHHHHHHHHHhCCCCCCeeecC-----CCCccchhHHHH---HHHHHHhCCCC--hHHHHHHHHHHHHccCCCCCcCCCC
Confidence 6778888888776654432111 133333333333 33333333221 1236678999998777889997543
No 61
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=24.05 E-value=45 Score=22.03 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=17.3
Q ss_pred CCCChhHHHHHHHHHHHhcH
Q 027089 4 DTISTAQMRAVVDEIIKAGR 23 (228)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~ 23 (228)
-.||.+-++|+++||+++.+
T Consensus 52 n~Lp~~yldqI~~FI~~N~~ 71 (80)
T 2k89_A 52 NDLNPMFLDQVAKFIIDNTK 71 (80)
T ss_dssp HTCCTTHHHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHHHhCC
Confidence 35899999999999999854
No 62
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=23.86 E-value=2.4e+02 Score=23.79 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHhcCCCCC--CCCCCCCC----CCcccccccCchHHHHHHHHHHHhhCcH---HHHHHHHHHHHHHHH
Q 027089 66 VEDVKGTLRYMIKNRFPSGN--YPSSEGSE----SDRLVHWCHGAPGVTLTLAKAAEVFGEK---EFLQAAVDAGEVVWK 136 (228)
Q Consensus 66 ~~~~~~~l~~l~~~~~~~g~--w~~~~~~~----~~~~~~WC~G~~Gi~~al~~~~~~~~~~---~~~~~~~~~~~~~~~ 136 (228)
.+...++.+|...+...++. |....... .+...+=-.|..=|+++|+++.+.-+++ +|.+++.+.++.+.+
T Consensus 78 ~~~Fd~l~~wt~~~~~~~~l~aW~~~~~g~~~~~~d~~~~AtDgDl~IA~ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~ 157 (363)
T 1kwf_A 78 QALFDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYN 157 (363)
T ss_dssp HHHHHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEECCCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHH
Confidence 45677788887653323332 54311000 0001112345555999999999988776 799999988887766
Q ss_pred hCCCCC-CccccCh--hh---------HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 027089 137 RGLLKR-VGICHGI--SG---------NTYVFLSLYRLTGNVEYLYRAKAFACFLYDR 182 (228)
Q Consensus 137 ~~~~~~-~~lCHG~--aG---------~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~ 182 (228)
...... ..+.=|. .+ ...+|..+++.++++.+.+.+..-.+.+.+.
T Consensus 158 ~~~~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~~~~~~~~~l~~~ 215 (363)
T 1kwf_A 158 HCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEV 215 (363)
T ss_dssp HHBCTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHH
T ss_pred HhccCCCeEEeccccCCCCCEecchhcCHHHHHHHHHccCCchHHHHHHHHHHHHHHH
Confidence 432111 1122221 11 1344566677788878887776665544443
No 63
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=23.25 E-value=4.1e+02 Score=27.02 Aligned_cols=39 Identities=10% Similarity=0.146 Sum_probs=25.4
Q ss_pred HHHHHHHHcccCC-CchHHHHHHHHHHHHHhcCCCCCCCC
Q 027089 50 AGIMHVLMDMELK-PDEVEDVKGTLRYMIKNRFPSGNYPS 88 (228)
Q Consensus 50 aGi~~~L~~~~~~-~~~~~~~~~~l~~l~~~~~~~g~w~~ 88 (228)
|=++-+|.++... ....+.++++++|+.+++..+|.|..
T Consensus 1020 Ayv~~~l~~a~~~~~v~~~~l~~a~~wL~~~Q~~dG~f~~ 1059 (1451)
T 4acq_A 1020 AFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRS 1059 (1451)
T ss_dssp HHHHHHHHHHTTTSCCCTHHHHHHHHHHHHTEETTTEECC
T ss_pred HHHHHHHHHhhhhcccCHHHHHHHHHHHHhhcccCCcccc
Confidence 4445555555432 11245789999999987777888874
No 64
>2z2q_B Coat protein gamma; wild type, icosahedral virus, virus/RNA complex; 2.70A {Flock house virus} PDB: 2q26_B 3lob_D 2bbv_D
Probab=22.85 E-value=74 Score=18.23 Aligned_cols=35 Identities=29% Similarity=0.351 Sum_probs=25.6
Q ss_pred HHHHHHHHhcHHhhhcCCCCCceeecCccccccccchHHHHHHH
Q 027089 13 AVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVL 56 (228)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L 56 (228)
+=|+.++|.+--.++..+.|+. ..|.|+.|+.-.+
T Consensus 5 ErVk~ilks~l~a~S~iPGPVG---------~~asGi~~l~~l~ 39 (44)
T 2z2q_B 5 ERVKSIIKSSLAAASNIPGPIG---------VAASGISGLSALF 39 (44)
T ss_pred HHHHHHHHHHHHHHhcCCCchh---------HHHHhHHHHHHHH
Confidence 4578888998888888888876 5667777665444
No 65
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=22.15 E-value=4.5e+02 Score=23.93 Aligned_cols=121 Identities=12% Similarity=-0.008 Sum_probs=0.0
Q ss_pred hHHHHHHHHcccCCCch------HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccccCchH----HHHHHHHHHHhh
Q 027089 49 LAGIMHVLMDMELKPDE------VEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPG----VTLTLAKAAEVF 118 (228)
Q Consensus 49 ~aGi~~~L~~~~~~~~~------~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~~~~~WC~G~~G----i~~al~~~~~~~ 118 (228)
.|..+.+-+++++..+. ++.++++.+|..+ .+.........=.|+..| .++|-..+++.+
T Consensus 156 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~----------~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~AT 225 (614)
T 1g87_A 156 TAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADK----------AKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLAT 225 (614)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH----------HCCCTTCCTTTTTSCCSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH----------cCCCCCCCcCcCCcCCCCchhHHHHHHHHHHHHh
Q ss_pred CcHHHHHHHHHHHHHHHH----hCCCCCCccccChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027089 119 GEKEFLQAAVDAGEVVWK----RGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLY 180 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~----~~~~~~~~lCHG~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~ 180 (228)
+++.|++.++......-. ........+|=... ..-..+.+.+.++++.|.+.++..++...
T Consensus 226 gd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~-~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 226 NDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDV-HYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp CCHHHHHHHHHTGGGSCBCTTSSSBCCSSCCBTTBC-HHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhhccccccccccccCCcCccch-HHHHHHHHHhccCcHHHHHHHHHHHHHhh
No 66
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=21.48 E-value=4.6e+02 Score=23.79 Aligned_cols=107 Identities=14% Similarity=0.133 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhCCCC--CC
Q 027089 66 VEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLK--RV 143 (228)
Q Consensus 66 ~~~~~~~l~~l~~~~~~~g~w~~~~~~~~~~~~~WC~G~~Gi~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 143 (228)
++.++++.+|..++. +.+.+... ......+|..-.==.++|-..+++.++++.|++.++.....+-...... ..
T Consensus 179 L~~Ak~~~~fA~~~~---g~y~~~~~-~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~ 254 (605)
T 1tf4_A 179 VQHAKQLYTFADTYR---GVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSY 254 (605)
T ss_dssp HHHHHHHHHHHHHSC---CCGGGTST-THHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGGGSCBCTTSSCBCC
T ss_pred HHHHHHHHHHHHHcC---CCcCCCCC-ccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHHHhcccccccccccc
Confidence 577788887776521 11211110 0111223322223368999999999999999998875332110000000 11
Q ss_pred ccccC----hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027089 144 GICHG----ISGNTYVFLSLYRLTGNVEYLYRAKAFACFL 179 (228)
Q Consensus 144 ~lCHG----~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i 179 (228)
.+-|+ .+|...+ +.++++++.|++.++++++..
T Consensus 255 ~~~~~Wd~~~~g~~~l---la~~~~~~~y~~~a~~~~~~~ 291 (605)
T 1tf4_A 255 RWTIAWDDKSYGTYVL---LAKETGKQKYIDDANRWLDYW 291 (605)
T ss_dssp SSCCSSSCCHHHHHHH---HHHHHCCHHHHHHHHHHHHHT
T ss_pred cccccccchHHHHHHH---HHhccChHHHHHHHHHHHHHH
Confidence 12222 3455333 246778888888887765543
No 67
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=21.43 E-value=60 Score=19.85 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=10.1
Q ss_pred CCCCChhHHHHHHHHH
Q 027089 3 KDTISTAQMRAVVDEI 18 (228)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (228)
||.++.++.+.+.+.+
T Consensus 2 kd~lt~eq~~aILkaL 17 (57)
T 3fxd_A 2 KDQLSDEQKETILKAL 17 (57)
T ss_dssp --CCCHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHH
Confidence 8999999876655544
No 68
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=21.18 E-value=1.3e+02 Score=25.54 Aligned_cols=37 Identities=16% Similarity=0.025 Sum_probs=31.2
Q ss_pred ChhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 027089 148 GISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 184 (228)
Q Consensus 148 G~aG~~~~ll~l~~~~~~~~~~~~a~~~~~~i~~~~~ 184 (228)
|..=+++.|+.+.+.-+++.|.+.|+++++.|+....
T Consensus 96 GDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~I~~~~v 132 (355)
T 3qxf_A 96 GDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEV 132 (355)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3444688999999999999999999999998887754
No 69
>3q7a_B Farnesyltransferase beta subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_B* 3q78_B* 3q79_B* 3q75_B* 3q7f_B* 3sfx_B* 3sfy_B*
Probab=21.07 E-value=1.8e+02 Score=26.19 Aligned_cols=33 Identities=21% Similarity=0.531 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCcccccc
Q 027089 69 VKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWC 101 (228)
Q Consensus 69 ~~~~l~~l~~~~~~~g~w~~~~~~~~~~~~~WC 101 (228)
.+++++|+.+.+.++|.|...+..+.+.+..||
T Consensus 169 r~k~v~fL~slQ~~DGSF~g~~wGe~Dir~TY~ 201 (520)
T 3q7a_B 169 RQSIYEFFMRCKRPDGGFVVCEGGEVDVRGTYC 201 (520)
T ss_dssp HHHHHHHHHHHBCTTSCBBSSTTCCBCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEecCCCCCchHHHHHH
Confidence 667899999877788988754333455566666
Done!