BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027090
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 218 bits (554), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 145/212 (68%), Gaps = 1/212 (0%)
Query: 9 DWKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDG 68
++ + P E +VL+GRTGNGKSATGNSI+ K FK+ SSGVT C V +G
Sbjct: 33 EFSASQPHPVE-NIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEG 91
Query: 69 QVVNVIDTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRL 128
++NVIDTPGLFDLS +EF+GKEIVKCL +A G+HA L+V SV R SQEEE + L
Sbjct: 92 PILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTL 151
Query: 129 PNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK 188
LFG + DY+IVVFTGGD LED TLED+LG P LK +L LC R +LFDNKTK
Sbjct: 152 QVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKRVLILCGQRMILFDNKTK 211
Query: 189 DEAKGTEQVRQLLSLVNSVIVQNGGQPYTDEL 220
D+ K T+QV +LL L++ V QN PYTDE+
Sbjct: 212 DDEKKTKQVHELLKLIDLVRKQNNNIPYTDEM 243
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 216 bits (551), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 142/201 (70%)
Query: 20 RTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGL 79
+ +VL+GRTGNGKS+TGN++LG K FK+ + GVT CEM ++DG ++NVIDTPGL
Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGL 65
Query: 80 FDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDY 139
D + + EI+ CL MA++GIHA L+V S R S+EEE+ V+ L +FG + DY
Sbjct: 66 CDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDY 125
Query: 140 MIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVRQ 199
IVVFTGGDDLE+ ++TL+D+ CP+ L ++L+LC R VLFDNK+KDE K EQV+Q
Sbjct: 126 CIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGRKVLFDNKSKDEKKKVEQVKQ 185
Query: 200 LLSLVNSVIVQNGGQPYTDEL 220
LL+ V +V Q GG PYT +L
Sbjct: 186 LLARVENVGEQTGGIPYTYQL 206
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
+VLLG+TG GKS+TGNSILGRKAF + + +TK CE K + DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFD 91
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
KEI +C+ + G HA L+V + ++ EE A +L ++F K +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPL-GCYTVEEHKATRKLLSMFEKKARRFMI 150
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVRQLL 201
++ T DDLED + + ++L P+ L+E++ NR LF+NK A+ EQ RQLL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-ETAPEVLQELIYEFRNRYCLFNNKASG-AEQEEQKRQLL 206
Query: 202 SLVNSVIVQNGGQPYTDEL 220
+LV S++ +NGG+ +T+++
Sbjct: 207 TLVQSMVRENGGKYFTNKM 225
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 123/206 (59%), Gaps = 6/206 (2%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVI 74
P N + +VL+G+TG GKSATGNSILGRK F + + +TK CE +++ K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 75 DTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGK 134
DTPG+FD + KEI++C+ + G HA L+V + R+++EE A ++ +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 135 NVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGT 194
+MI++FT DDL D L D+L E P+ +++++ + +R +NK A+
Sbjct: 144 RARSFMILIFTRKDDLGD--TNLHDYL-REAPEDIQDLMDIFGDRYCALNNKATG-AEQE 199
Query: 195 EQVRQLLSLVNSVIVQNGGQPYTDEL 220
Q QLL L+ V+ +N YT+ +
Sbjct: 200 AQRAQLLGLIQRVVRENKEGCYTNRM 225
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 6/190 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
+VLLG+TG GKS+TGNSILG K F + + +TK CE + + DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCEKRVSTW-DGKELVVVDTPGIFD 91
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
+EI + + + G HA L+V + R++ EE A ++ ++FGK +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVRQLL 201
++ T DDLED + + ++L + PK +E++ NR LF+N+ A+ EQ QLL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-EKAPKFFQEVMHEFQNRYCLFNNRASG-AEKEEQKMQLL 206
Query: 202 SLVNSVIVQN 211
+LV S+ + +
Sbjct: 207 TLVQSMFLSS 216
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 120/200 (60%), Gaps = 6/200 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
+VL+G+TG+GKSAT N+ILG + F + + VTK C+ K + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQ-KASREWQGRDLLVVDTPGLFD 69
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
+ KEI +C+ + G HA ++V + R+++EE+ V + +FGK+ +M+
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMKHMV 128
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK-DEAKGTEQVRQL 200
++FT ++LE ++ DF+ + LK I++ C NRC F N K +A+ QV++L
Sbjct: 129 ILFTRKEELEG--QSFHDFIA-DADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQEL 185
Query: 201 LSLVNSVIVQNGGQPYTDEL 220
+ L+ ++ N G ++D++
Sbjct: 186 VELIEKMVQCNEGAYFSDDI 205
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 14 SPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNV 73
S R ++L+GRTG GKSATGNSILG++ F + G++ VT+ C + D V V
Sbjct: 22 SRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRW-DKCHVEV 80
Query: 74 IDTPGLFDLSAGSEFVG-KEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLF 132
+DTP +F G +E C ++ G HA L+V + RF+ +++ AV ++ ++F
Sbjct: 81 VDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMF 139
Query: 133 GKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAK 192
G++V +M++VFT +DL +L D++ + + L+E++ C R FDN+ A
Sbjct: 140 GEDVLKWMVIVFTRKEDLAG--GSLHDYVSNTENRALRELVAECGGRVCAFDNR----AT 193
Query: 193 GTE---QVRQLLSLVNSVIVQNGGQPYTDEL 220
G E QV QLL +V +++++ G Y++E+
Sbjct: 194 GREQEAQVEQLLGMVEGLVLEHKGAHYSNEV 224
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 117/203 (57%), Gaps = 10/203 (4%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPG--- 78
+VL+GR+G GKSATGNSILG F + + VTKT + DGQ V V+DTP
Sbjct: 441 IVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFNQ 499
Query: 79 LFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFD 138
+ D+ + +E+ +CL + G F++VF + RF++E++TAV +L +FG +
Sbjct: 500 MLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFTK 558
Query: 139 YMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVR 198
Y I++FT +DL LEDF+ + K L+ I + C R F+NK +A+ T QV+
Sbjct: 559 YAIMLFTRKEDL--GAGNLEDFMKNSDNKALRRIFKKCGRRVCAFNNKETGQAQET-QVK 615
Query: 199 QLLSLVNSVIVQNG--GQPYTDE 219
LL+ VN + ++G G P+T E
Sbjct: 616 ALLTKVNDLRKESGWSGYPHTQE 638
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 7/198 (3%)
Query: 19 ERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPG 78
E ++LLG+ +GKSATGN+ILG+ FK+ V K C+ ++ VL++ +VV VIDTP
Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPD 68
Query: 79 LFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFD 138
LF A +E + I CL ++ +HA L+V ++ + F++E+E + +FG
Sbjct: 69 LFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGH-FTREDEETAKGIQQVFGAEARR 127
Query: 139 YMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVR 198
++I+VFT + + L+DF+ E KPLK+++Q + R +F+NKT + + QV
Sbjct: 128 HIIIVFT--RKDDLGDDLLQDFI--EKNKPLKQLVQDYEGRYCIFNNKTNSKDEQITQVL 183
Query: 199 QLLSLVNSVIVQNGGQPY 216
+LL V S++ NGG PY
Sbjct: 184 ELLRKVESLVNTNGG-PY 200
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 3 ERVVDGDWKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKT 62
ER + +P E TV+L+G+ G GKSA GNSILGR+AF+ VT++ ++
Sbjct: 231 ERQLQSTGPEQNPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSES 290
Query: 63 TVLKDGQVVNVIDTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEE 122
+ + V++ID P + L V K I G HAFL+V + +++ +E
Sbjct: 291 RSWRKKK-VSIIDAPDISSLKNIDSEVRKHIC-------TGPHAFLLVTPL-GFYTKNDE 341
Query: 123 TAVHRLPNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVL 182
+ + N FG+ F+YMI++ T +DL D + L+ FL K L ++Q C NR
Sbjct: 342 AVLSTIQNNFGEKFFEYMIILLTRKEDLGDQD--LDTFL-RNSNKALYGLIQKCKNRYSA 398
Query: 183 FDNKTKDEAKGTEQVRQ---LLSLVNSVIVQNGGQ 214
F+ + A G E+ RQ LL + S++ QNG +
Sbjct: 399 FNYR----ATGEEEQRQADELLEKIESMVHQNGNK 429
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 10/190 (5%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++LLGR+G GKSATGN+ILGR AF + + VT + + L D Q V V+DTP F
Sbjct: 478 IILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPS-FI 535
Query: 82 LSAGSE----FVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVF 137
+ G+E + +EI CL + ++G+ F++V + RF+QE+E V +L F +N+
Sbjct: 536 QTPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENIM 594
Query: 138 DYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQV 197
YMIV+FT +DL D + L D+ + K LK+IL+ C+ R F+NK E + T QV
Sbjct: 595 KYMIVLFTRKEDLGDGD--LHDYTNNTKNKALKKILKKCNGRVCAFNNKETGEDQET-QV 651
Query: 198 RQLLSLVNSV 207
+ LL + NS+
Sbjct: 652 KGLLKIANSL 661
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 126/219 (57%), Gaps = 10/219 (4%)
Query: 7 DGDWKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLK 66
+G++K ++ R ++LLG+ G GKSATGN+ILG+ F++ VT C+ ++ ++
Sbjct: 37 EGNFKQNQGTSTLR-LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVR 95
Query: 67 DGQVVNVIDTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVH 126
QV+ VIDTP LF + SE + + +CL + D H L++ + +++E+ +
Sbjct: 96 GKQVI-VIDTPDLFSSLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIE 153
Query: 127 RLPNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQ-LCDNRCVLFDN 185
+ G + +MIVVFT D+L+ E +L +++ E + LKE+++ + RC F+N
Sbjct: 154 GIWGKIGPKAYRHMIVVFTREDELD--EDSLWNYI--ESKESLKELIKNIGSRRCCTFNN 209
Query: 186 KTKDEAKGTEQVRQLLSLVNSVIVQNGGQPYTDELKVTS 224
K D+ + QV +LL + +++++ +PY + LK+ S
Sbjct: 210 KA-DKKQRELQVFKLLDAIELLMMES-PEPYFEPLKMES 246
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKAS-AGSSGVTKTCEMKTTVLKDGQVVNV 73
P E V+L+G+ G GKSA GNSILG++ FK + VTK + V + G+ V +
Sbjct: 280 PDMPELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQ-GKKVLI 338
Query: 74 IDTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFG 133
ID+P + V G HAFL+V + + +++ + +FG
Sbjct: 339 IDSPEISSWKLDESAVKNHTFP-------GPHAFLLVTPLGSSLKSDDD-VFSIIKRIFG 390
Query: 134 KNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKG 193
+ + IV+FT +D ED + L+ + L + Q R +F+ + E +
Sbjct: 391 EKFTKFTIVLFTRKEDFED--QALDKVIKEN--DALYNLTQKFGERYAIFNYRASVEEEQ 446
Query: 194 TEQVRQLLSLVNSVIVQNGGQP 215
+ QV +LLS + ++ + +P
Sbjct: 447 S-QVGKLLSQIEKMVQCHSNKP 467
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 120/200 (60%), Gaps = 7/200 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G++G GKSATGNSIL R AF++ VT+T + +T +G+ + V+DTP +F+
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAETGTW-EGRSILVVDTPPIFE 87
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
A ++ + K+I C + G H L+V + RF+ E+ AV + +FG V +MI
Sbjct: 88 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHMI 146
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK-DEAKGTEQVRQL 200
V+FT +DLE EK+LE+F+ H + L+ + Q C R F+N+ +E +G Q+ +L
Sbjct: 147 VLFTRKEDLE--EKSLEEFVTHTDNRSLRSLTQECGRRYCAFNNRASGEEQQG--QLAEL 202
Query: 201 LSLVNSVIVQNGGQPYTDEL 220
++LV + + G ++++L
Sbjct: 203 MALVRRLEQECEGSFHSNDL 222
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 119/215 (55%), Gaps = 9/215 (4%)
Query: 10 WKPTS----PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVL 65
W P + S E ++L+G+TG GKSA GNSIL ++AF++ GS +TKTC
Sbjct: 9 WGPHAKGQCASRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSW 68
Query: 66 KDGQVVNVIDTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAV 125
+ ++V +IDTP +F E + KE+ +C ++ G H L+V + R++ +++ A
Sbjct: 69 GNREIV-IIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAA 126
Query: 126 HRLPNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDN 185
R+ +FG++ + IV+FT +DL +L D++ K L +++ C R F+N
Sbjct: 127 QRVKEIFGEDAMGHTIVLFTHKEDLNG--GSLMDYMHDSDNKALSKLVAACGGRICAFNN 184
Query: 186 KTKDEAKGTEQVRQLLSLVNSVIVQNGGQPYTDEL 220
+ + + +QV++L+ + ++++ G YT+ L
Sbjct: 185 RAEGSNQD-DQVKELMDCIEDLLMEKNGDHYTNGL 218
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 11/191 (5%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++LLGR+G GKSATGN+ILGR AF + + VT + L D Q + V+DTP L
Sbjct: 477 IILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLNQ 535
Query: 82 LSAGSE----FVGKEIVKCLGM-AKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNV 136
+S G+E + KEI +CL ++G+ F++VF + RF+QE+E V +L F +N+
Sbjct: 536 MS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEENI 593
Query: 137 FDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQ 196
YMIV+FT +DL D + L DF + K LK I + C R F+NK E + T Q
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKRIFKKCKGRVCAFNNKETGEDQET-Q 650
Query: 197 VRQLLSLVNSV 207
V+ LL++ N +
Sbjct: 651 VKALLTIANDL 661
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 115/201 (57%), Gaps = 10/201 (4%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++LLG+ G GKSATGN+ILG+ F++ VTK C+ ++ ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
E + + +CL + D + L+V + + ++E++ + + +FG + +MI
Sbjct: 110 SLGCPEVQQQNLRQCLDLLADP-YVLLLVTPIGHS-TEEDKKTIEGIQGVFGPQAYRHMI 167
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQ-LCDNRCVLFDNKTKDEAKGTEQVRQL 200
VVFT D+L E TL++ + E K LK++++ + RC F+NK D+ + QV Q
Sbjct: 168 VVFTREDEL--GEDTLQNHI--ESKKYLKKLIENIGSQRCCAFNNKA-DKKQQELQVSQF 222
Query: 201 LSLVNSVIVQNGGQPYTDELK 221
L + +++++ G Y + LK
Sbjct: 223 LDAIEFLMMESPG-TYFEPLK 242
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 10 WKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ 69
W +P E V+L+G+ G GKSA GNSILG++ FK + L + +
Sbjct: 277 WDRDTP---ELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQK 333
Query: 70 VVNVIDTPGLFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLP 129
+ID+P + V + G HAFL+V + + + ++ +
Sbjct: 334 KFLIIDSPEISSWKLDESDVKEHTF-------PGPHAFLLVTPLGSSL-KSGDSVFSIIK 385
Query: 130 NLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKD 189
+FG+ + I++FT +D E + L+ F L ++Q+ + R +F+ +
Sbjct: 386 RIFGEKFIKFTIILFTRKEDFEGQD--LDTFTKEN--DALCNLIQIFEGRYAVFNYRATV 441
Query: 190 EAKGTEQVRQLLSLVNSVIVQNGGQP 215
E + + QV +LLS + SV+ + +P
Sbjct: 442 EEEQS-QVGKLLSQIESVVQHHNNKP 466
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 120/200 (60%), Gaps = 7/200 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G++G GKSATGNS+L R AF++ VT+T + +T +G+ + V+DTP +F+
Sbjct: 25 ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAETGTW-EGRSILVVDTPPIFE 83
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
A ++ + K+I C + G H L+V + RF+ E+ AV + +FG V +MI
Sbjct: 84 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVFGVGVMRHMI 142
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK-DEAKGTEQVRQL 200
V+FT +DL EK+LE+F+ H + L+ ++Q C R F+N+ +E +G Q+ +L
Sbjct: 143 VLFTRKEDLA--EKSLEEFVTHTDNRSLRSLVQECGRRYCAFNNRASGEEQQG--QLAEL 198
Query: 201 LSLVNSVIVQNGGQPYTDEL 220
++LV + + G ++++L
Sbjct: 199 MALVRRLEQECEGSFHSNDL 218
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 12/203 (5%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+GRTG GKSATGNSILG+K F + G+ VT++C + + + Q V V+DTP +F
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWAGWQ-VEVVDTPDIFS 64
Query: 82 LSAGSEFVG-KEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYM 140
G E +C ++ G HA L+V + RF+ ++ A+ + LFGK V
Sbjct: 65 SEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMART 123
Query: 141 IVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTE---QV 197
+VVFT +DL +L+D++ + L++++ C R +N+ A G+E Q
Sbjct: 124 VVVFTRQEDLAG--DSLQDYVHCTDNRALRDLVAECGGRVCALNNR----ATGSEREAQA 177
Query: 198 RQLLSLVNSVIVQNGGQPYTDEL 220
QLL +V ++ ++GG Y++E+
Sbjct: 178 EQLLGMVACLVREHGGAHYSNEV 200
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 9/200 (4%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G+TG+GKSATGNSILGR+AF++ + VT T + T +G+ + VIDTP +F
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQKGTREF-EGKELEVIDTPDIFS 164
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
E K+I C +A G HA L+V V R++ E++ L +FG + Y I
Sbjct: 165 PQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTI 221
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK-DEAKGTEQVRQL 200
+VFT +DL E +LE+++ K L + C+ R F+NK + DE + Q+++L
Sbjct: 222 LVFTRKEDL--AEGSLEEYIQENNNKSLDVLDVACERRHCGFNNKAQGDEQEA--QLKKL 277
Query: 201 LSLVNSVIVQNGGQPYTDEL 220
+ V ++ +N G YT E
Sbjct: 278 MEEVELILWENEGHCYTMEF 297
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 118/204 (57%), Gaps = 7/204 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G++G GKSATGNSIL R AF++ VT+T + + +G+ V+DTP +F+
Sbjct: 47 ILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDTPPIFE 105
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
++ + K+I C M G H L+V + R++ E+ AV + +FG V YMI
Sbjct: 106 SKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGVMRYMI 164
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK-DEAKGTEQVRQL 200
V+FT +DL D ++LE+F+ H L ++Q C R F+NK +E +G Q+ +L
Sbjct: 165 VLFTHKEDLAD--ESLEEFVTHTGNLDLHRLVQECGRRYCAFNNKASGEEQQG--QLAEL 220
Query: 201 LSLVNSVIVQNGGQPYTDELKVTS 224
++LV + ++ G ++++L V +
Sbjct: 221 MALVRRLEQEHEGSFHSNDLFVYT 244
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 107 bits (266), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 119/199 (59%), Gaps = 5/199 (2%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G+TG GKSATGNSILG+ F++ + VT+TC++KT +G+ V V+DTP +F+
Sbjct: 30 IILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQVKTGTW-NGRKVLVVDTPSIFE 88
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
A ++ + K I C ++ G H L+V + RF+ ++ A+ ++ +FG +++
Sbjct: 89 SQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIRKVKEVFGTGAMRHVV 147
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVRQLL 201
++FT +DL + L+D++ + LK++++ C+ R F+N E + +Q +LL
Sbjct: 148 ILFTHKEDLGG--QALDDYVANTDNCSLKDLVRECERRYCAFNNWGSVEEQRQQQA-ELL 204
Query: 202 SLVNSVIVQNGGQPYTDEL 220
+++ + + G ++++L
Sbjct: 205 AVIERLGREREGSFHSNDL 223
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 9/204 (4%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G+TG+GKSATGNSILGR+ F++ + VT + + L +G+ + VIDTP +
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILS 163
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
E K+I C +A G HA L+V V R++ E++ A L +FG + Y I
Sbjct: 164 PQNQPEATAKKI--CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTI 220
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK-DEAKGTEQVRQL 200
+VFT ++L E +LE+++ K L + C+ R F+N+ + DE + Q+++L
Sbjct: 221 LVFTRKEEL--AEGSLEEYIKENNNKTLDALDVACERRHCGFNNRAQGDEQEA--QLQKL 276
Query: 201 LSLVNSVIVQNGGQPYTDELKVTS 224
+ + S++ +N G YT EL S
Sbjct: 277 MEEIESILWENEGHCYTMELPNVS 300
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G+TG+GKSATGNSILGR F++ + VTKT + ++ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWA-GKELEVIDTPNILS 101
Query: 82 LSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYMI 141
E V I + + ++ G HA L+V + RF+ E++ V RL +FG V + I
Sbjct: 102 PQVSPE-VADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTI 159
Query: 142 VVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQVRQLL 201
+VFT +DL +LED++ + L + R F+N+ + E + Q+R+L+
Sbjct: 160 LVFTRKEDLAG--GSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEA-QLRELM 216
Query: 202 SLVNSVIVQNGGQPYTD 218
V +++ +N G Y++
Sbjct: 217 EKVEAIMWENEGDYYSN 233
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
++L+G++G+GKSATGNSILGR+ F++ + VT+ + +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQQGCRAW-EGRELQVIDTPDILS 154
Query: 82 LSAGSEFVGKEIVKCLGMAKDGI----HAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVF 137
A G + +G A G +A L+V + RF++E++ RL +FGK +
Sbjct: 155 PWA----AGWATAQGVGEAGTGSLPKQYAVLLVTQL-GRFTEEDQQVAGRLEEVFGKGIL 209
Query: 138 DYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTKDEAKGTEQV 197
I+VFT +DL+ ++LE +L + L ++ +C R F+NK D A+ Q+
Sbjct: 210 ARTILVFTRKEDLDG--RSLETYLRETDNRALAKLDDVCSRRHCGFNNK-GDGAEQETQL 266
Query: 198 RQLLSLVNSVIVQNGGQPYT 217
R+L+ V V+ + G Y+
Sbjct: 267 RELMRHVEGVLKEPEGCAYS 286
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTK------TCEMKTTVLKDGQ----VV 71
+ + GRT +GKS+ GN +LG F +S VTK +C + + + GQ +
Sbjct: 11 LAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQI 70
Query: 72 NVIDTPGLFDLSAGSEFVGKEIVKCL--GMAKDGIH-AFLVVFSVTNRFSQEEETAVHRL 128
V+DTPG + V +E+ K L ++G+H A LV + F QE AV +
Sbjct: 71 QVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQLM 130
Query: 129 PNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNK 186
L G + +YM V+FT ++LE+ + E++L E L +L +R + +
Sbjct: 131 QELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL-REASDTLLTLLDSVQHRYIFLSGR 187
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 13 TSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCE----------MKT 62
T P+ + L G T +GKS+ GN +LG F +S VT C M+
Sbjct: 2 TDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRR 61
Query: 63 TVLKDGQVVNVIDTPGLFDLSAGSEFVGKEIVKCLG--MAKDGIHAFLVVFSVTNRFSQE 120
L+ V V+DTPG ++V +E+ + L + G+H L+V F +
Sbjct: 62 GGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQ 121
Query: 121 EET-AVHRLPNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNR 179
E T V + L G +Y ++FT + +E+ T + +L HE LK +L ++
Sbjct: 122 EVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL-HEASDTLKTLLNSIQHK 180
Query: 180 CVLFDNKTKDEAKGTEQVRQLLSLVNSVIVQNGGQPYT 217
V K K EQ ++L + I +N Q T
Sbjct: 181 YVFQYKKGKSL---NEQRMKILERIMEFIKENCYQVLT 215
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVT------KTCEMKTTVLKDGQ----VV 71
+ L G T +GKS+ GN ILG F +S VT ++C ++ + + GQ V
Sbjct: 10 LALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQV 69
Query: 72 NVIDTPGLFDLSAGSEFVGKEIVKCLG--MAKDGIH-AFLVVFSVTNRFSQEEETAVHRL 128
V+DTPG + V +E+ + L ++G+H A LV + QEE + V +
Sbjct: 70 QVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQMI 129
Query: 129 PNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK 188
L G +Y ++FT + +E+ +++L E + L ++L +R +F K
Sbjct: 130 QELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLKLLNSIQHR-YIFQYK-- 185
Query: 189 DEAKGTEQVRQLLSLVNSVI 208
KG Q L ++ +I
Sbjct: 186 ---KGNSLSEQRLKILERII 202
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQV----------V 71
+ +LG+T +GKS+ GN +LG F + VTK C + + G + +
Sbjct: 10 LAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQI 69
Query: 72 NVIDTPGLFDLSAGSEFVGKEIVKCL--GMAKDGIH-AFLVVFSVTNRFSQEEETAVHRL 128
V+DTPG + V +E+ K L ++G+H A LV + F QE +V +
Sbjct: 70 QVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQLI 129
Query: 129 PNLFGKNVFDYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEILQLCDNRCVLFDNKTK 188
L G + +Y ++FT + +++ + E++L E L +L +R + +
Sbjct: 130 QELLGDSWKNYTAILFTHAEKIKEAGLSEEEYLC-EASDALLTLLNSVQHRHIFLYERGN 188
Query: 189 DEAKGTEQVRQLLSLVNSVIVQNGGQ 214
+EQ ++L + I +N Q
Sbjct: 189 S---WSEQRIKILERIMEFIKENHFQ 211
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 13 TSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVN 72
TS S+ +T+ L+G TG+G++AT N+I G+K ++ ++ VT C+ D + N
Sbjct: 875 TSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPINN 934
Query: 73 VIDTPG 78
+IDTPG
Sbjct: 935 MIDTPG 940
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
+++LG+TG GKSAT NSI G+ + A G + E+ TV G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 82 LSAGSEFVGKEIV 94
LS+ S ++I+
Sbjct: 227 LSSSSTRKNRKIL 239
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASA-GSSGVTKTCEMKTTVLKDGQVVNVIDTPGL 79
TV+++G+ G GKS+T NS++G KA S S G+ T +T + G +N+IDTPGL
Sbjct: 40 TVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRT---RSGFTLNIIDTPGL 96
Query: 80 FD 81
+
Sbjct: 97 IE 98
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 19 ERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPG 78
E V+LLGRTG GKS+T N++ G SS + + +G +N+IDTPG
Sbjct: 151 ECNVLLLGRTGVGKSSTLNTVFG---IDIPVHSSESCTQDPFTYSRVVNGFKLNIIDTPG 207
Query: 79 LFDLSAGSEFVGKEIVKCLG-MAKDGIHAFLVVFSVT-NRFSQEEETAVHRLPNLFGKNV 136
D S G ++K ++ IH L V T RF + +++ G +
Sbjct: 208 FLD-SQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQL 266
Query: 137 FDYMIVVFT 145
+ VV T
Sbjct: 267 WRNAAVVLT 275
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLF 80
TV++LG+ G GKS+T NS++G + + S + + + T+ G +N+IDTPGL
Sbjct: 38 TVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM--GGFTINIIDTPGLV 95
Query: 81 DLSAGSEFVGKEIVKCLG--MAKDGIHAFLVVFSV-TNRFSQEEETAVHRLPNLFGKNVF 137
+ AG +V + ++ + + I L V + R + ++ V + FGK ++
Sbjct: 96 E--AG--YVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIW 151
Query: 138 DYMIVVFTGGDDLEDHEKTLEDFLGHECPKPLKEI 172
++V T E + E F LK I
Sbjct: 152 CKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTI 186
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLF 80
T++++G+ G GKS+T NSI+G + S S + + + + G +N+IDTPGL
Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLI 98
Query: 81 DLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSV-TNRFSQEEETAVHRLPNLFGKNVFDY 139
+ ++ + I+K + K I L V + R ++ + + FGK +++
Sbjct: 99 EGGYIND-MALNIIKSFLLDK-TIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 156
Query: 140 MIVVFT 145
IV T
Sbjct: 157 AIVALT 162
>sp|A5PK43|ERAL1_BOVIN GTPase Era, mitochondrial OS=Bos taurus GN=ERAL1 PE=2 SV=1
Length = 437
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 11 KPTSPSNGE-RTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ 69
+P P N VVLLG GKS N +LGRK F S T++ + K+ Q
Sbjct: 104 RPDMPENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSK-KVHTTRSQALGVITEKETQ 162
Query: 70 VVNVIDTPGLFD 81
V+ ++DTPGL
Sbjct: 163 VI-LLDTPGLIS 173
>sp|D2GU20|ERAL1_AILME GTPase Era, mitochondrial OS=Ailuropoda melanoleuca GN=ERAL1 PE=3
SV=1
Length = 437
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 11 KPTSPSNGE-RTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ 69
+P P N VVLLG GKS N +LGRK F S T+ + K+ Q
Sbjct: 104 RPDMPENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSK-KVHTTRCQALGVITEKEAQ 162
Query: 70 VVNVIDTPGLFD 81
V+ ++DTPGL
Sbjct: 163 VI-LLDTPGLIS 173
>sp|Q92C22|RSGA1_LISIN Putative ribosome biogenesis GTPase RsgA 1 OS=Listeria innocua
serovar 6a (strain CLIP 11262) GN=rsgA1 PE=3 SV=1
Length = 346
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 2 GERVVDGDWKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASA----GSSGVTKT 57
G ++ D KP S T+VLLG +G GKS+ NS+ G K S S G T
Sbjct: 172 GFEALEADLKPNS------TLVLLGSSGVGKSSFINSLAGADLMKTSEIREDDSKGKHTT 225
Query: 58 CEMKTTVLKDGQVVNVIDTPGLFDLSAGSEFVGKE 92
+ +L +G + +IDTPG+ + G G E
Sbjct: 226 THREMHLLANGWI--IIDTPGMREFGIGLNQAGLE 258
>sp|Q3YRS0|ERA_EHRCJ GTPase Era OS=Ehrlichia canis (strain Jake) GN=era PE=3 SV=1
Length = 296
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 24 LLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFDLS 83
++G T GKS N ++GRK A+ T M + + + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGRKV--AAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSPK 70
Query: 84 AGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRL 128
E K IVK M+ GI +++ V N ++ E + R+
Sbjct: 71 TKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRI 112
>sp|Q8Y7F0|RSGA1_LISMO Putative ribosome biogenesis GTPase RsgA 1 OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=rsgA1 PE=3 SV=1
Length = 346
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 2 GERVVDGDWKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASA----GSSGVTKT 57
G ++ D KP S T++LLG +G GKS+ NS+ G K + S G T
Sbjct: 172 GFEALESDLKPNS------TLILLGSSGVGKSSFINSLAGTDLMKTAGIREDDSKGKHTT 225
Query: 58 CEMKTTVLKDGQVVNVIDTPGLFDLSAGSEFVGKE 92
+ +L +G + VIDTPG+ + G G E
Sbjct: 226 THREMHLLSNGWI--VIDTPGMREFGVGFNQAGLE 258
>sp|Q68XY6|ERA_RICTY GTPase Era OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=era PE=3 SV=1
Length = 295
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTV--LKDGQVVNVIDTPG 78
+V ++GR +GKS N I+G K S + V T + T + LKD Q++ + DTPG
Sbjct: 10 SVCIIGRPNSGKSTLLNRIIGE---KLSIVTPKVQTTRSIITGIITLKDTQII-LYDTPG 65
Query: 79 LFDLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFD 138
+F+ E K +V+C A +++ +V S+ + ++ A H + N F + +
Sbjct: 66 IFEPKGMLE---KAMVRC---AWSSLYSADLVLSIIDSLKPLDDMA-HNILNQFC--LLN 116
Query: 139 YMIVVFTGGDDLED-HEKTLEDFLGHECPKPL 169
+ + D+E + ++ FL PK L
Sbjct: 117 IVPIFLLNKIDIESKYLNDIKAFLKISHPKSL 148
>sp|Q9SLF3|TC132_ARATH Translocase of chloroplast 132, chloroplastic OS=Arabidopsis
thaliana GN=TOC132 PE=1 SV=1
Length = 1206
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLF 80
T+++LG++G GKSAT NSI F A G + +++ V G V VIDTPGL
Sbjct: 576 TIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLV--QGIKVRVIDTPGLL 633
>sp|B5Z9J7|ENGB_HELPG Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
G27) GN=engB PE=3 SV=1
Length = 208
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ----- 69
P++ +V+LGR+ GKS+ N++LG+ K+SA + G T+ +T +D +
Sbjct: 20 PASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALTT 78
Query: 70 VVNVIDTPGLFDLSAGSEFVGKE 92
NVID PG F + S+ + KE
Sbjct: 79 TFNVIDLPG-FGYAKVSKSLKKE 100
>sp|Q15MS9|MNME_PSEA6 tRNA modification GTPase MnmE OS=Pseudoalteromonas atlantica
(strain T6c / ATCC BAA-1087) GN=mnmE PE=3 SV=1
Length = 460
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
VV+ GR GKS+ N++ GR A +A +G T+ +K + DG +++IDT GL D
Sbjct: 225 VVIAGRPNAGKSSLLNALAGRDAAIVTA-IAGTTRDV-LKEHIHIDGMPLHIIDTAGLRD 282
Query: 82 LSAGSEFVGKE 92
S E +G E
Sbjct: 283 SSDEVERIGIE 293
>sp|B6JP76|ENGB_HELP2 Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
P12) GN=engB PE=3 SV=1
Length = 208
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ----- 69
P++ +V+LGR+ GKS+ N++LG+ K+SA + G T+ +T +D +
Sbjct: 20 PASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALRA 78
Query: 70 VVNVIDTPGL 79
NVID PG
Sbjct: 79 TFNVIDLPGF 88
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis
thaliana GN=TOC159 PE=1 SV=1
Length = 1503
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGL 79
+++LG+ G GKSAT NSILG + A T E+ TV +G + IDTPGL
Sbjct: 858 ILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTV--NGVKITFIDTPGL 913
>sp|Q1CR39|ENGB_HELPH Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
HPAG1) GN=engB PE=3 SV=1
Length = 208
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ----- 69
P++ +V+LGR+ GKS+ N++LG+ K+SA + G T+ +T +D +
Sbjct: 20 PASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALTT 78
Query: 70 VVNVIDTPGL 79
NVID PG
Sbjct: 79 TFNVIDLPGF 88
>sp|Q6CYQ9|MNME_ERWCT tRNA modification GTPase MnmE OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=mnmE
PE=3 SV=1
Length = 454
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 22 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLFD 81
VV+ GR GKS+ N++ GR+A +A +G T+ ++ + DG +++IDT GL D
Sbjct: 219 VVIAGRPNAGKSSLLNALAGREAAIVTA-IAGTTRDV-LREHIHIDGMPLHIIDTAGLRD 276
Query: 82 LSAGSEFVGKE 92
S E +G E
Sbjct: 277 ASDEVERIGIE 287
>sp|B2UVY4|ENGB_HELPS Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
Shi470) GN=engB PE=3 SV=1
Length = 208
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ----- 69
P++ +V+LGR+ GKS+ N++LG+ K+SA + G T+ +T +D +
Sbjct: 20 PASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALRA 78
Query: 70 VVNVIDTPGLFDLSAGSEFVGKE 92
NVID PG F + S+ + KE
Sbjct: 79 TFNVIDLPG-FGYAKVSKSLKKE 100
>sp|Q9ZE30|ERA_RICPR GTPase Era OS=Rickettsia prowazekii (strain Madrid E) GN=era PE=3
SV=1
Length = 295
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLF 80
+V ++GR +GKS N I+G K T++ LKD Q++ + DTPG+F
Sbjct: 10 SVCIIGRPNSGKSTLLNRIIGEK-LSIVTPKVQTTRSIITGIVTLKDTQII-LYDTPGIF 67
Query: 81 DLSAGSEFVGKEIVKCLGMAKDGIHAFLVVFSVTNRFSQEEETAVHRLPNLFGKNVFDYM 140
+ E K +V+C A +++ +V S+ + + A H + N F + + +
Sbjct: 68 EPKGMLE---KAMVRC---AWSSVYSADLVLSIIDSLKPLDNIA-HNILNQFC--LLNIV 118
Query: 141 IVVFTGGDDLED-HEKTLEDFLGHECPKPL 169
+ D+E + ++ FL PK L
Sbjct: 119 PIFLLNKIDIESKYLNDIKAFLKITHPKSL 148
>sp|Q71ZZ0|RSGA2_LISMF Putative ribosome biogenesis GTPase RsgA 2 OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=rsgA2 PE=3
SV=1
Length = 346
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 2 GERVVDGDWKPTSPSNGERTVVLLGRTGNGKSATGNSILGRKAFKASA----GSSGVTKT 57
G ++ D KP S T+VLLG +G GKS+ NS+ G K + S G T
Sbjct: 172 GFEALERDLKPNS------TLVLLGSSGVGKSSFINSLAGTDLMKTAGIREDDSKGKHTT 225
Query: 58 CEMKTTVLKDGQVVNVIDTPGLFDLSAGSEFVGKE 92
+ +L +G + VIDTPG+ + G G E
Sbjct: 226 THREMHLLTNGWI--VIDTPGMREFGVGFNQAGLE 258
>sp|Q9LUS2|TC120_ARATH Translocase of chloroplast 120, chloroplastic OS=Arabidopsis
thaliana GN=TOC120 PE=1 SV=1
Length = 1089
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLF 80
T+++LG++G GKSAT NSI A G K +++ V G V VIDTPGL
Sbjct: 458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFV--QGIKVRVIDTPGLL 515
>sp|O26087|ENGB_HELPY Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=engB PE=3 SV=1
Length = 208
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ----- 69
P++ +V+LGR+ GKS+ N++LG+ K+SA + G T+ +T +D +
Sbjct: 20 PASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALRA 78
Query: 70 VVNVIDTPGLFDLSAGSEFVGKE 92
NVID PG F + S+ + KE
Sbjct: 79 TFNVIDLPG-FGYAKVSKSLKKE 100
>sp|Q9ZJ42|ENGB_HELPJ Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
J99) GN=engB PE=3 SV=1
Length = 208
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 15 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQ----- 69
P++ +V+LGR+ GKS N++LG+ K+SA + G T+ +T +D +
Sbjct: 20 PASLTSEMVILGRSNVGKSTFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALTT 78
Query: 70 VVNVIDTPGLFDLSAGSEFVGKE 92
NVID PG F + S+ + KE
Sbjct: 79 TFNVIDLPG-FGYAKVSKSLKKE 100
>sp|B1JFV3|MNME_PSEPW tRNA modification GTPase MnmE OS=Pseudomonas putida (strain W619)
GN=mnmE PE=3 SV=1
Length = 456
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 21 TVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLF 80
TVV+ GR GKS+ N + GR+A +A +G T+ ++ + DG ++V+DT GL
Sbjct: 218 TVVIAGRPNAGKSSLLNQLAGREAAIVTA-IAGTTRDI-LREHIHIDGMPLHVVDTAGLR 275
Query: 81 DLSAGSEFVGKE-IVKCLGMA 100
D E +G E +K +G A
Sbjct: 276 DTDDHVEKIGVERALKAIGEA 296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,989,056
Number of Sequences: 539616
Number of extensions: 3810193
Number of successful extensions: 14214
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 13815
Number of HSP's gapped (non-prelim): 618
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)