Query 027094
Match_columns 228
No_of_seqs 172 out of 854
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 04:53:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027094.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027094hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02314 pectinesterase 100.0 4.7E-32 1E-36 258.2 20.8 158 67-225 69-235 (586)
2 PLN02468 putative pectinestera 100.0 2.1E-31 4.5E-36 252.8 19.3 155 67-225 63-218 (565)
3 TIGR01614 PME_inhib pectineste 100.0 8.6E-31 1.9E-35 215.2 19.5 150 66-223 27-177 (178)
4 PLN02313 Pectinesterase/pectin 100.0 4.9E-31 1.1E-35 251.1 19.9 159 67-225 58-221 (587)
5 PLN02217 probable pectinestera 100.0 2.8E-31 6.1E-36 254.2 18.3 158 66-225 51-209 (670)
6 PLN02484 probable pectinestera 100.0 6E-31 1.3E-35 250.3 20.0 155 67-225 72-228 (587)
7 PLN02713 Probable pectinestera 100.0 7.1E-31 1.5E-35 249.0 17.7 151 69-222 33-188 (566)
8 smart00856 PMEI Plant invertas 100.0 1.4E-30 3E-35 207.3 16.5 145 67-219 3-148 (148)
9 PLN02745 Putative pectinestera 100.0 2.9E-30 6.2E-35 245.8 21.5 156 65-225 76-233 (596)
10 PLN02990 Probable pectinestera 100.0 1.3E-30 2.8E-35 247.4 18.8 157 67-225 52-211 (572)
11 PLN02416 probable pectinestera 100.0 1.3E-30 2.8E-35 246.0 18.6 180 40-225 8-193 (541)
12 PLN02506 putative pectinestera 100.0 1.5E-30 3.4E-35 245.2 18.5 160 65-225 31-193 (537)
13 PLN02708 Probable pectinestera 100.0 2.2E-30 4.8E-35 245.2 19.5 153 65-224 41-196 (553)
14 PLN02995 Probable pectinestera 100.0 6.2E-30 1.3E-34 241.4 19.1 156 68-225 34-192 (539)
15 PLN02197 pectinesterase 100.0 5.5E-30 1.2E-34 243.2 18.5 155 66-225 36-192 (588)
16 PLN02301 pectinesterase/pectin 100.0 6E-30 1.3E-34 241.4 16.5 154 65-225 47-202 (548)
17 PF04043 PMEI: Plant invertase 100.0 2.3E-28 4.9E-33 194.8 16.0 146 66-219 2-152 (152)
18 PLN02698 Probable pectinestera 100.0 2.7E-28 5.8E-33 228.6 17.4 153 65-225 19-178 (497)
19 PLN03043 Probable pectinestera 100.0 2.8E-28 6E-33 230.3 15.8 149 72-222 3-156 (538)
20 PLN02933 Probable pectinestera 99.9 9.7E-24 2.1E-28 198.2 18.0 125 96-225 48-183 (530)
21 PLN02201 probable pectinestera 99.9 1.2E-22 2.5E-27 191.0 15.7 124 99-223 37-163 (520)
22 PLN02488 probable pectinestera 99.9 1.3E-21 2.8E-26 182.2 13.6 151 72-224 2-160 (509)
23 PLN02170 probable pectinestera 99.9 3.4E-21 7.3E-26 180.7 12.3 126 79-225 58-186 (529)
24 PLN02916 pectinesterase family 99.7 9.9E-17 2.1E-21 150.1 11.9 87 129-225 56-142 (502)
25 KOG1733 Mitochondrial import i 63.1 59 0.0013 24.0 7.5 52 105-156 26-84 (97)
26 PF02953 zf-Tim10_DDP: Tim10/D 45.5 58 0.0013 21.8 4.7 29 129-157 36-64 (66)
27 PF07870 DUF1657: Protein of u 42.8 92 0.002 20.1 6.3 43 110-153 5-47 (50)
28 PLN02749 Uncharacterized prote 37.4 2.1E+02 0.0045 23.3 7.2 62 133-195 62-123 (173)
29 PF15284 PAGK: Phage-encoded v 34.5 32 0.0007 23.4 1.9 21 35-55 2-22 (61)
30 PF11172 DUF2959: Protein of u 34.4 2.1E+02 0.0046 24.2 7.1 86 73-160 5-91 (201)
31 PF14290 DUF4370: Domain of un 33.8 2E+02 0.0043 24.5 6.8 62 133-195 128-189 (239)
32 PF07172 GRP: Glycine rich pro 28.8 36 0.00078 25.2 1.5 6 41-46 6-11 (95)
33 PF13198 DUF4014: Protein of u 26.9 74 0.0016 22.4 2.7 21 34-54 11-31 (72)
34 KOG4514 Uncharacterized conser 24.3 3.4E+02 0.0074 22.8 6.5 58 96-158 121-179 (222)
35 PF05478 Prominin: Prominin; 24.3 4.5E+02 0.0098 26.8 8.9 22 170-191 275-299 (806)
36 KOG4841 Dolichol-phosphate man 23.6 60 0.0013 23.8 1.8 26 136-161 65-90 (95)
37 PF10968 DUF2770: Protein of u 22.0 79 0.0017 19.2 1.8 22 19-48 7-28 (36)
No 1
>PLN02314 pectinesterase
Probab=100.00 E-value=4.7e-32 Score=258.25 Aligned_cols=158 Identities=27% Similarity=0.433 Sum_probs=137.5
Q ss_pred hhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHh
Q 027094 67 DRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELS 146 (228)
Q Consensus 67 ~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~ 146 (228)
....|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++.++...++++... +.+++++.||+||+|+|+
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k~AL~DC~Elld 147 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLKSALRVCETLFD 147 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999988788999999999999999999999999988654 468899999999999999
Q ss_pred hHHHHHHHHHHHhccccccc--ccccHhHHHHHHHHHhcchhHHHhhcCCCCC----chhh---hHHHHHHHHHHHHHHH
Q 027094 147 DSVDELRKSIGEMGLIKASN--FELTMSDIQTWVSAALTDETTCSDGFEKNTV----NGKV---VRAQIVKIAHMTSNAL 217 (228)
Q Consensus 147 ~avd~L~~a~~~L~~~~~~~--~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~----~~~~---v~~~~~~~~~L~SnaL 217 (228)
+++|+|++++.+|+..+... ..+.++|++|||||||||++||+|||++.+. .+++ |+..+.++.+|+||+|
T Consensus 148 dAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNaL 227 (586)
T PLN02314 148 DAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSL 227 (586)
T ss_pred HHHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543221 2457899999999999999999999986532 2222 7778899999999999
Q ss_pred HHHHHhhh
Q 027094 218 ALINSYAS 225 (228)
Q Consensus 218 Aii~~l~~ 225 (228)
||++++..
T Consensus 228 AIi~~l~~ 235 (586)
T PLN02314 228 AIVSKILG 235 (586)
T ss_pred HHHhhhcc
Confidence 99998654
No 2
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=2.1e-31 Score=252.75 Aligned_cols=155 Identities=24% Similarity=0.336 Sum_probs=135.5
Q ss_pred hhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCChhHHHHHHHHHHHH
Q 027094 67 DRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSP-GMKPREVDAMQDCLEEL 145 (228)
Q Consensus 67 ~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~-~~~~~~~~aL~dC~ely 145 (228)
....|+.+|+.|+||++|+++|+++|.+...+|++|+++++++++.++.++...+.++.... +.+++++.||+||+|+|
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence 34599999999999999999999999877789999999999999999999988888775432 45789999999999999
Q ss_pred hhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 027094 146 SDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVKIAHMTSNALALINSYAS 225 (228)
Q Consensus 146 ~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~~~~~~L~SnaLAii~~l~~ 225 (228)
++++++|++++.+++... . .+.++|++|||||||||++||+|||++.+.. +.|...+.++.+|+||+|||++.+..
T Consensus 143 ddaid~L~~Sl~~l~~~~--~-~~~~dDl~TWLSAAlTnq~TClDGF~e~~vk-~~~~~~l~n~~eLtSNaLAIi~~l~~ 218 (565)
T PLN02468 143 DLAIDNLNNSLTSSGGVS--V-LDNVDDLRTWLSSAGTYQETCIDGLAEPNLK-SFGENHLKNSTELTSNSLAIITWIGK 218 (565)
T ss_pred HHHHHHHHHHHHHHhccc--c-ccchHHHHHHHHHHhcchhhhhhhhcccCch-HHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999999997432 1 4567999999999999999999999876543 33888999999999999999998553
No 3
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=99.97 E-value=8.6e-31 Score=215.23 Aligned_cols=150 Identities=33% Similarity=0.521 Sum_probs=135.8
Q ss_pred hhhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHH
Q 027094 66 ADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEEL 145 (228)
Q Consensus 66 a~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely 145 (228)
.+.+.|+.+|++|+||++|+++|.++|++...||++|+.++++.+..++..+..+++++.+..+ ++..+.+++||.++|
T Consensus 27 ~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~~-~~~~~~al~~C~~~y 105 (178)
T TIGR01614 27 ATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHISKLLLTKG-DPRDKSALEDCVELY 105 (178)
T ss_pred chHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHHHHHH
Confidence 4678999999999999999999999998877899999999999999999999999999976544 788999999999999
Q ss_pred hhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHHHHHh
Q 027094 146 SDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVN-GKVVRAQIVKIAHMTSNALALINSY 223 (228)
Q Consensus 146 ~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~-~~~v~~~~~~~~~L~SnaLAii~~l 223 (228)
++++++|++++++++.+ .++|+++|||+|+++++||+|||.+.+.. ..+|..++.++.+|++|+|+|++++
T Consensus 106 ~~a~~~L~~a~~~l~~~-------~~~d~~~~ls~a~~~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 106 SDAVDALDKALASLKSK-------DYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HHHHHHHHHHHHHHHhc-------chhHHHHHHHHHHcccchHHHHhccCCCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999954 47999999999999999999999976521 1238899999999999999999875
No 4
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=4.9e-31 Score=251.15 Aligned_cols=159 Identities=33% Similarity=0.558 Sum_probs=136.8
Q ss_pred hhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCChhHHHHHHHHHHHH
Q 027094 67 DRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSP-GMKPREVDAMQDCLEEL 145 (228)
Q Consensus 67 ~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~-~~~~~~~~aL~dC~ely 145 (228)
....|+.+|+.|+||++|+++|++++.+...+|++|++++|++++.++.++...++++.+.. +.+++++.||+||+|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 44699999999999999999999988776779999999999999999999999999887533 56889999999999999
Q ss_pred hhHHHHHHHHHHHhccccc-ccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchh---hhHHHHHHHHHHHHHHHHHHH
Q 027094 146 SDSVDELRKSIGEMGLIKA-SNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGK---VVRAQIVKIAHMTSNALALIN 221 (228)
Q Consensus 146 ~~avd~L~~a~~~L~~~~~-~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~---~v~~~~~~~~~L~SnaLAii~ 221 (228)
++++|+|++++.+++..+. ..+.++.+|++||||||||||+||+|||++.+..++ .|...+.++.+|+||+|||++
T Consensus 138 ddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~ 217 (587)
T PLN02313 138 DETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIK 217 (587)
T ss_pred HHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999985322 233456799999999999999999999985432222 288889999999999999999
Q ss_pred Hhhh
Q 027094 222 SYAS 225 (228)
Q Consensus 222 ~l~~ 225 (228)
.+..
T Consensus 218 ~~~~ 221 (587)
T PLN02313 218 NMTE 221 (587)
T ss_pred cccc
Confidence 8763
No 5
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.8e-31 Score=254.24 Aligned_cols=158 Identities=24% Similarity=0.449 Sum_probs=134.6
Q ss_pred hhhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHH
Q 027094 66 ADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEEL 145 (228)
Q Consensus 66 a~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely 145 (228)
++.++|+.+|+.|+||++|+++|++++ ....+|++|++++|++++.++.++...+.++.. ...+++++.|++||+|+|
T Consensus 51 ~~~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~-~~~~~r~k~AL~DClELl 128 (670)
T PLN02217 51 TSVKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIE-LQKDPRTKMALDQCKELM 128 (670)
T ss_pred hHHHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCChHHHHHHHHHHHHH
Confidence 456699999999999999999999988 456799999999999999999999988888843 235789999999999999
Q ss_pred hhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCch-hhhHHHHHHHHHHHHHHHHHHHHhh
Q 027094 146 SDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNG-KVVRAQIVKIAHMTSNALALINSYA 224 (228)
Q Consensus 146 ~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~-~~v~~~~~~~~~L~SnaLAii~~l~ 224 (228)
++++|+|++++.+|+..+...+....+|++||||||||||+||.|||++.+..- +.|+..+.++.+|+||+|||++++.
T Consensus 129 ddAvDeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~ls 208 (670)
T PLN02217 129 DYAIGELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEMS 208 (670)
T ss_pred HHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999998433333345679999999999999999999998644211 1288889999999999999999865
Q ss_pred h
Q 027094 225 S 225 (228)
Q Consensus 225 ~ 225 (228)
.
T Consensus 209 s 209 (670)
T PLN02217 209 N 209 (670)
T ss_pred c
Confidence 4
No 6
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6e-31 Score=250.34 Aligned_cols=155 Identities=30% Similarity=0.457 Sum_probs=133.0
Q ss_pred hhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHh
Q 027094 67 DRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELS 146 (228)
Q Consensus 67 ~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~ 146 (228)
....|+.+|+.|+||++|+++|+++|.+...+|++|+++++++++.++.++......+.. .+.+++++.||+||+|+|+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k~AL~DClELld 150 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVRSAYDSCLELLD 150 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Confidence 456999999999999999999999998877899999999999999999987666554433 4568899999999999999
Q ss_pred hHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCC-C-chhhhHHHHHHHHHHHHHHHHHHHHhh
Q 027094 147 DSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNT-V-NGKVVRAQIVKIAHMTSNALALINSYA 224 (228)
Q Consensus 147 ~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~-~-~~~~v~~~~~~~~~L~SnaLAii~~l~ 224 (228)
+++|+|++++.+|+..+. .+.++|++|||||||||++||+|||++.+ . -.+.|.+.+.++.+|+||||||++.+.
T Consensus 151 dAid~L~~Sl~~l~~~~~---~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~~ 227 (587)
T PLN02484 151 DSVDALSRALSSVVPSSG---GGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSASN 227 (587)
T ss_pred HHHHHHHHHHHHHhcccc---ccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999985321 34679999999999999999999998653 1 112288999999999999999999876
Q ss_pred h
Q 027094 225 S 225 (228)
Q Consensus 225 ~ 225 (228)
.
T Consensus 228 ~ 228 (587)
T PLN02484 228 G 228 (587)
T ss_pred c
Confidence 4
No 7
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=7.1e-31 Score=248.95 Aligned_cols=151 Identities=21% Similarity=0.265 Sum_probs=130.2
Q ss_pred HHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--CChhHHHHHHHHHHHHh
Q 027094 69 RFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPG--MKPREVDAMQDCLEELS 146 (228)
Q Consensus 69 ~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~--~~~~~~~aL~dC~ely~ 146 (228)
..+..+|+.|+||++|+++|++. ...+|.+|++++|++++.++.++...++++.+..+ .+++++.||+||+|+|+
T Consensus 33 ~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~ELld 109 (566)
T PLN02713 33 VSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQFLAG 109 (566)
T ss_pred CCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHH
Confidence 35688999999999999999762 24689999999999999999999999999876443 38899999999999999
Q ss_pred hHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhh---hHHHHHHHHHHHHHHHHHHHH
Q 027094 147 DSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKV---VRAQIVKIAHMTSNALALINS 222 (228)
Q Consensus 147 ~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~---v~~~~~~~~~L~SnaLAii~~ 222 (228)
+++|+|++++.+++..+...+.+..+|++||||||||||+||+|||++.+..+++ |...+.++.+|+||+|||++.
T Consensus 110 davD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv~~ 188 (566)
T PLN02713 110 LNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLALFTK 188 (566)
T ss_pred HHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999854332345678999999999999999999999876533222 788899999999999999986
No 8
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=99.97 E-value=1.4e-30 Score=207.34 Aligned_cols=145 Identities=38% Similarity=0.592 Sum_probs=131.3
Q ss_pred hhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHh
Q 027094 67 DRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELS 146 (228)
Q Consensus 67 ~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~ 146 (228)
..++|+.+|++|+||++|+++|.++|++...|+.+|++++++.++.++..+..+++++.+ .+.++..+.+++||.++|+
T Consensus 3 ~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~-~~~~~~~~~al~~C~~~y~ 81 (148)
T smart00856 3 TSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLK-KTKDPRLKAALKDCLELYD 81 (148)
T ss_pred HHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence 577999999999999999999999998888999999999999999999999999999876 3568999999999999999
Q ss_pred hHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHH
Q 027094 147 DSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVN-GKVVRAQIVKIAHMTSNALAL 219 (228)
Q Consensus 147 ~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~-~~~v~~~~~~~~~L~SnaLAi 219 (228)
+++++|++++.++..+ .++|+++|||+|+++++||+|||.+.+.. .+.|..++.++.+|++|+|+|
T Consensus 82 ~a~~~L~~a~~~l~~~-------~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 82 DAVDSLEKALEELKSG-------DYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHhc-------chhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999854 47999999999999999999999874321 123889999999999999986
No 9
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.9e-30 Score=245.84 Aligned_cols=156 Identities=24% Similarity=0.430 Sum_probs=135.3
Q ss_pred chhhHHHHccccCCCChhchHHHHhcccc--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHH
Q 027094 65 AADRRFIKTSCSSTTYPTLCYKSLARHAS--LIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCL 142 (228)
Q Consensus 65 ~a~~~~I~~~C~~T~yp~~C~~sLs~~p~--s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ 142 (228)
....++|+.+|+.|+||++|+++|+++.. +...+|++|++++|+++++++..+...+.++. +.+++++.|++||+
T Consensus 76 ~~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k~Al~DC~ 152 (596)
T PLN02745 76 SQVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEKDAIEDCK 152 (596)
T ss_pred chHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHHHHHHHHH
Confidence 35678999999999999999999998753 34578999999999999999999888887773 35789999999999
Q ss_pred HHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHH
Q 027094 143 EELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVKIAHMTSNALALINS 222 (228)
Q Consensus 143 ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~~~~~~L~SnaLAii~~ 222 (228)
|+|++++++|++++.+|+. +...+.+.++|++|||||||||++||+|||++.... +.|...+.++.+|+||+|||++.
T Consensus 153 ELlddAid~L~~Sl~~l~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~l~-s~m~~~l~~~~eLtSNALAiv~~ 230 (596)
T PLN02745 153 LLVEDAKEELKASISRIND-EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEGKLK-SEMEKTFKSSQELTSNSLAMVSS 230 (596)
T ss_pred HHHHHHHHHHHHHHHHHhh-cccccccchHHHHHHHHHHhccHhHHHhhhcccchH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999985 223445678999999999999999999999875533 23889999999999999999998
Q ss_pred hhh
Q 027094 223 YAS 225 (228)
Q Consensus 223 l~~ 225 (228)
++.
T Consensus 231 lss 233 (596)
T PLN02745 231 LTS 233 (596)
T ss_pred hhh
Confidence 765
No 10
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.3e-30 Score=247.43 Aligned_cols=157 Identities=23% Similarity=0.381 Sum_probs=132.9
Q ss_pred hhHHHHccccCCCChhchHHHHhc-cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCChhHHHHHHHHHHH
Q 027094 67 DRRFIKTSCSSTTYPTLCYKSLAR-HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKS-PGMKPREVDAMQDCLEE 144 (228)
Q Consensus 67 ~~~~I~~~C~~T~yp~~C~~sLs~-~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~-~~~~~~~~~aL~dC~el 144 (228)
....|+.+|+.|+||++|+++|++ .+. ..+|++|+++++++++.++.++...+.+++.. .+.+++++.|++||+|+
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 345999999999999999999998 333 57899999999999999999998888777543 35689999999999999
Q ss_pred HhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchh-hhHHHHHHHHHHHHHHHHHHHHh
Q 027094 145 LSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGK-VVRAQIVKIAHMTSNALALINSY 223 (228)
Q Consensus 145 y~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~-~v~~~~~~~~~L~SnaLAii~~l 223 (228)
|++++|+|++++.+|+..+...+...++|++|||||||||++||+|||++.+..-+ .+...+.++.+|+||+|||++++
T Consensus 130 lddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~~ 209 (572)
T PLN02990 130 MNDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITNI 209 (572)
T ss_pred HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999985433344456899999999999999999999986442111 27888899999999999999987
Q ss_pred hh
Q 027094 224 AS 225 (228)
Q Consensus 224 ~~ 225 (228)
..
T Consensus 210 ~~ 211 (572)
T PLN02990 210 SN 211 (572)
T ss_pred hc
Confidence 64
No 11
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.3e-30 Score=246.04 Aligned_cols=180 Identities=21% Similarity=0.329 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHhhcc----cCCCCCCCCchhhHHHHccccCCCChhchHHHHhcccccc-CCCHHHHHHHHHHHHHHHH
Q 027094 40 YFLILLAIFSYLNSSS----ASRHGPSKIAADRRFIKTSCSSTTYPTLCYKSLARHASLI-QTSPKLLAHASLNVTLAMA 114 (228)
Q Consensus 40 ~~l~ll~~~~~~~~~~----~~~~~~~~~~a~~~~I~~~C~~T~yp~~C~~sLs~~p~s~-~~dp~~L~~~al~~a~~~a 114 (228)
.+||||++..+++++. +|..- +..++.++|+.+|+.|+||++|+++|++++... ..++..++.++|+.++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~ 85 (541)
T PLN02416 8 LLLFLLFFSPFFFSSAWYSNASYTT--SLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEA 85 (541)
T ss_pred HHHHHHHcchhhccchhhccccccc--CCchHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHH
Confidence 4677777777777642 22222 334567899999999999999999999987532 3467889999999999998
Q ss_pred HHHHHHHHHhhcCCCCChhHHHHHHHHHHHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCC
Q 027094 115 KSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEK 194 (228)
Q Consensus 115 ~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~ 194 (228)
..+...++.+......+++++.|++||+|+|++++|+|++++.+|+..+ . +.++|++|||||||||++||+|||++
T Consensus 86 ~~~s~l~s~~~~~~~~~~~~k~AL~DC~El~~dAvD~L~~Sl~~L~~~~---~-~~~~DvqTWLSAALT~q~TC~DGF~~ 161 (541)
T PLN02416 86 GKLTNLLSGAGQSSNIIEKQRGTIQDCKELHQITVSSLKRSVSRIQAGD---S-RKLADARAYLSAALTNKNTCLEGLDS 161 (541)
T ss_pred HHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---c-cchhhHHHHHHHHhcchhhHHhhhhh
Confidence 8888877766444345788999999999999999999999999998532 2 36899999999999999999999987
Q ss_pred CCCc-hhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 027094 195 NTVN-GKVVRAQIVKIAHMTSNALALINSYAS 225 (228)
Q Consensus 195 ~~~~-~~~v~~~~~~~~~L~SnaLAii~~l~~ 225 (228)
.+.. .+.|...+.++.+++||+|||++.+..
T Consensus 162 ~~~~~~~~i~~~~~~v~qltSNALAlv~~~~~ 193 (541)
T PLN02416 162 ASGPLKPKLVNSFTSTYKHVSNSLSMLPKSRR 193 (541)
T ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 5422 122889999999999999999987653
No 12
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.5e-30 Score=245.15 Aligned_cols=160 Identities=26% Similarity=0.384 Sum_probs=134.1
Q ss_pred chhhHHHHccccCCCChhchHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHH
Q 027094 65 AADRRFIKTSCSSTTYPTLCYKSLARHASL-IQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLE 143 (228)
Q Consensus 65 ~a~~~~I~~~C~~T~yp~~C~~sLs~~p~s-~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~e 143 (228)
.....+|+.+|+.|+||++|+++|+++... ...+|++|++++|++++++++++...++++... ..+++++.|++||+|
T Consensus 31 ~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~-~~~~r~~~Al~DC~E 109 (537)
T PLN02506 31 LNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNAL-SISYREQVAIEDCKE 109 (537)
T ss_pred hhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHHHHHHHHH
Confidence 346669999999999999999999986543 447899999999999999999999999988543 367899999999999
Q ss_pred HHhhHHHHHHHHHHHhccccc-ccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchh-hhHHHHHHHHHHHHHHHHHHH
Q 027094 144 ELSDSVDELRKSIGEMGLIKA-SNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGK-VVRAQIVKIAHMTSNALALIN 221 (228)
Q Consensus 144 ly~~avd~L~~a~~~L~~~~~-~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~-~v~~~~~~~~~L~SnaLAii~ 221 (228)
+|++++++|++++.+++.... .......+|++|||||||||++||+|||++.+..-+ .|+..+.++.+|+||+|||++
T Consensus 110 llddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALAiv~ 189 (537)
T PLN02506 110 LLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLAMYT 189 (537)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999874321 111124689999999999999999999987542112 288999999999999999999
Q ss_pred Hhhh
Q 027094 222 SYAS 225 (228)
Q Consensus 222 ~l~~ 225 (228)
+++.
T Consensus 190 ~l~~ 193 (537)
T PLN02506 190 QLHS 193 (537)
T ss_pred hccc
Confidence 8764
No 13
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.2e-30 Score=245.24 Aligned_cols=153 Identities=22% Similarity=0.338 Sum_probs=128.8
Q ss_pred chhhHHHHccccCCCChhchHHHHhcccc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHH
Q 027094 65 AADRRFIKTSCSSTTYPTLCYKSLARHAS-LIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLE 143 (228)
Q Consensus 65 ~a~~~~I~~~C~~T~yp~~C~~sLs~~p~-s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~e 143 (228)
.....+|+..|+.|+||++|+++|++++. +...+|.+|++++|++++.++.++...++.+.+..+.+.....|++||+|
T Consensus 41 ~~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~E 120 (553)
T PLN02708 41 PSTPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLE 120 (553)
T ss_pred CCccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHH
Confidence 35788999999999999999999999885 34568999999999999999999999999887643223334589999999
Q ss_pred HHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhh--hHHHHHHHHHHHHHHHHHHH
Q 027094 144 ELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKV--VRAQIVKIAHMTSNALALIN 221 (228)
Q Consensus 144 ly~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~--v~~~~~~~~~L~SnaLAii~ 221 (228)
+|++++|+|++++.++... .++|++||||||||||+||.|||++.+..+.+ ....+.++.+|+||+|||++
T Consensus 121 Llddavd~L~~Sl~~L~~~-------~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~~~L~nvs~LtSNSLAmv~ 193 (553)
T PLN02708 121 VLSNSEHRISSTDIALPRG-------KIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTMSFLDSLIGLTSNALSMMA 193 (553)
T ss_pred HHHHHHHHHHHHHHHhhhc-------chHHHHHHHHHHhccHhHHHHHhhccCccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999888732 57999999999999999999999865421121 12678999999999999999
Q ss_pred Hhh
Q 027094 222 SYA 224 (228)
Q Consensus 222 ~l~ 224 (228)
+++
T Consensus 194 ~~~ 196 (553)
T PLN02708 194 SYD 196 (553)
T ss_pred ccc
Confidence 854
No 14
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.2e-30 Score=241.36 Aligned_cols=156 Identities=23% Similarity=0.341 Sum_probs=130.2
Q ss_pred hHHHHccccCCCChhchHHHHhccccccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHh
Q 027094 68 RRFIKTSCSSTTYPTLCYKSLARHASLIQ-TSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELS 146 (228)
Q Consensus 68 ~~~I~~~C~~T~yp~~C~~sLs~~p~s~~-~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~ 146 (228)
..+|+.+|+.|.||++|+++|.++|.+.. .++.+++++++++++.++.++...+.++.+. ..+++.+.|++||+|+|+
T Consensus 34 ~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~-~~~~r~~~AL~DC~ELl~ 112 (539)
T PLN02995 34 STDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKN-CTDFKKQAVLADCIDLYG 112 (539)
T ss_pred hHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCHHHHHHHHHHHHHHH
Confidence 34999999999999999999999887543 4899999999999999999999999888553 357889999999999999
Q ss_pred hHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHH--HHHHHHHHHHHHHHHHhh
Q 027094 147 DSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQI--VKIAHMTSNALALINSYA 224 (228)
Q Consensus 147 ~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~--~~~~~L~SnaLAii~~l~ 224 (228)
+++|+|++++.+++........+..+|++|||||||||++||+|||++.+..+. +...+ .++.+|+||+|||++.+.
T Consensus 113 DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~-v~~~v~~~~~~~ltSNaLAi~~~l~ 191 (539)
T PLN02995 113 DTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDF-ITPIVSNTKISHLISNCLAVNGALL 191 (539)
T ss_pred HHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccccchhh-hhhhhhhhhHHHHHHHHHHHhhhhc
Confidence 999999999999985322112235689999999999999999999987654332 33333 679999999999999875
Q ss_pred h
Q 027094 225 S 225 (228)
Q Consensus 225 ~ 225 (228)
.
T Consensus 192 ~ 192 (539)
T PLN02995 192 T 192 (539)
T ss_pred c
Confidence 4
No 15
>PLN02197 pectinesterase
Probab=99.97 E-value=5.5e-30 Score=243.16 Aligned_cols=155 Identities=19% Similarity=0.346 Sum_probs=132.3
Q ss_pred hhhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCChhHHHHHHHHHH
Q 027094 66 ADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMS--KSPGMKPREVDAMQDCLE 143 (228)
Q Consensus 66 a~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~--~~~~~~~~~~~aL~dC~e 143 (228)
+..+.|+.+|+.|+||++|+++|++++ ..+|++|++++|++++.+++++...+..+. ...+.+++++.|++||+|
T Consensus 36 ~~~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~e 112 (588)
T PLN02197 36 PQMKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKR 112 (588)
T ss_pred hhHHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Confidence 345589999999999999999999988 358999999999999999999999888664 223458899999999999
Q ss_pred HHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Q 027094 144 ELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVKIAHMTSNALALINSY 223 (228)
Q Consensus 144 ly~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~~~~~~L~SnaLAii~~l 223 (228)
+|++++|+|++++.+++. +...+....+|++||||||||||+||+|||++.+.. +.|...+.++.+|+||+|||++.+
T Consensus 113 Ll~davd~L~~Sl~~l~~-~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~k-~~v~~~l~nv~~LtSNaLAiv~~l 190 (588)
T PLN02197 113 VFMYALEDLSTIVEEMGE-DLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEEDDLR-KTIGEGIANSKILTSNAIDIFHSV 190 (588)
T ss_pred HHHHHHHHHHHHHHHHhh-cccccccchhhHHHHHHHHHhChhhhhccccCcchH-HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999983 112233467999999999999999999999876532 238888999999999999999986
Q ss_pred hh
Q 027094 224 AS 225 (228)
Q Consensus 224 ~~ 225 (228)
+.
T Consensus 191 s~ 192 (588)
T PLN02197 191 VS 192 (588)
T ss_pred ch
Confidence 53
No 16
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6e-30 Score=241.44 Aligned_cols=154 Identities=19% Similarity=0.350 Sum_probs=134.2
Q ss_pred chhhHHHHccccCCCChhchHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHH
Q 027094 65 AADRRFIKTSCSSTTYPTLCYKSLARHASL--IQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCL 142 (228)
Q Consensus 65 ~a~~~~I~~~C~~T~yp~~C~~sLs~~p~s--~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ 142 (228)
....++|+..|+.|+||++|+++|++++.+ ...+|.+|++++|++++.++.++...++++.. ++.+++++.|++||+
T Consensus 47 ~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~aAL~DC~ 125 (548)
T PLN02301 47 SSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDKAALADCV 125 (548)
T ss_pred CCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHHHHHHHHH
Confidence 345689999999999999999999998854 34589999999999999999999999998844 456889999999999
Q ss_pred HHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHH
Q 027094 143 EELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVKIAHMTSNALALINS 222 (228)
Q Consensus 143 ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~~~~~~L~SnaLAii~~ 222 (228)
|+|++++|+|++++.+++.... ..++|++|||||||||++||+|||++... +.|...+.++.+|+||+|||++.
T Consensus 126 ELl~davd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TC~DGF~~~~~--~~~~~~l~n~~qL~SNsLAiv~~ 199 (548)
T PLN02301 126 ELMDLSKDRIKDSVEALGNVTS----KSHADAHTWLSSVLTNHVTCLDGINGPSR--QSMKPGLKDLISRARTSLAILVS 199 (548)
T ss_pred HHHHHHHHHHHHHHHHhhcccc----cchHHHHHHHHHHhcchhhHHhhhhhhhh--hhHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999885421 24699999999999999999999987542 23888999999999999999998
Q ss_pred hhh
Q 027094 223 YAS 225 (228)
Q Consensus 223 l~~ 225 (228)
++.
T Consensus 200 l~~ 202 (548)
T PLN02301 200 VSP 202 (548)
T ss_pred ccc
Confidence 653
No 17
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.96 E-value=2.3e-28 Score=194.76 Aligned_cols=146 Identities=36% Similarity=0.588 Sum_probs=125.3
Q ss_pred hhhHHHHccccCCCChh-chHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHH
Q 027094 66 ADRRFIKTSCSSTTYPT-LCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEE 144 (228)
Q Consensus 66 a~~~~I~~~C~~T~yp~-~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~el 144 (228)
++.+.|+++|++|+||. +|+++|.+++.....||.+|++++|+++..++..+..+++++.+..+.++..+.+|++|.++
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~ 81 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQEL 81 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHH
Confidence 35789999999999777 99999999987778999999999999999999999999999987656789999999999999
Q ss_pred HhhHHHHHHHHHHHh--cccccccccccHhHHHHHHHHHhcchhHHHhhcC--CCCCchhhhHHHHHHHHHHHHHHHHH
Q 027094 145 LSDSVDELRKSIGEM--GLIKASNFELTMSDIQTWVSAALTDETTCSDGFE--KNTVNGKVVRAQIVKIAHMTSNALAL 219 (228)
Q Consensus 145 y~~avd~L~~a~~~L--~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~--~~~~~~~~v~~~~~~~~~L~SnaLAi 219 (228)
|++++++|+++++++ ..+ .++++++|||+|+++++||+|||. +.+.. ..|...+.++.+|++|+|||
T Consensus 82 y~~a~~~l~~a~~~l~~~~~-------~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~-~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 82 YDDAVDSLQRALEALNSKNG-------DYDDARTWLSAALTNQDTCEDGFEEAGSPVK-SPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHHH--HHT--------HHHHHHHHHHHHHHHHHHHHHC-TTSSS---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccc-------hhHHHHHHHHHHHHHHHHHHHHhcccCCCcc-chHHHHHHHHHHHHHHHhhC
Confidence 999999999999999 432 578999999999999999999995 33222 23889999999999999997
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=2.7e-28 Score=228.56 Aligned_cols=153 Identities=24% Similarity=0.326 Sum_probs=131.7
Q ss_pred chhhHHHHccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--ChhHHHHHHHHH
Q 027094 65 AADRRFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGM--KPREVDAMQDCL 142 (228)
Q Consensus 65 ~a~~~~I~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~--~~~~~~aL~dC~ 142 (228)
.+...+|+.+|+.|+||++|+++|++.+. +|++|++++|++++.+++++...+.++....+. +++++.|++||+
T Consensus 19 ~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC~ 94 (497)
T PLN02698 19 FAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSCE 94 (497)
T ss_pred hhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHHH
Confidence 46889999999999999999999999774 899999999999999999999999988654333 377889999999
Q ss_pred HHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCC--ch---hhhHHHHHHHHHHHHHHH
Q 027094 143 EELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTV--NG---KVVRAQIVKIAHMTSNAL 217 (228)
Q Consensus 143 ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~--~~---~~v~~~~~~~~~L~SnaL 217 (228)
|+|++++++|++++.+|+.... +.++|++|||||||||++||+|||.+... .. +.|...+.++.+|+||+|
T Consensus 95 Ell~dsvd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNAL 170 (497)
T PLN02698 95 RLMKMSLKRLRQSLLALKGSSR----KNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSL 170 (497)
T ss_pred HHHHHHHHHHHHHHHHHhhccc----cchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999985421 36799999999999999999999954211 11 128889999999999999
Q ss_pred HHHHHhhh
Q 027094 218 ALINSYAS 225 (228)
Q Consensus 218 Aii~~l~~ 225 (228)
||++.+..
T Consensus 171 Amv~~l~~ 178 (497)
T PLN02698 171 ALVNRITP 178 (497)
T ss_pred HHHhhhhc
Confidence 99998765
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.96 E-value=2.8e-28 Score=230.32 Aligned_cols=149 Identities=23% Similarity=0.315 Sum_probs=127.1
Q ss_pred HccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCChhHHHHHHHHHHHHhh
Q 027094 72 KTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSK----SPGMKPREVDAMQDCLEELSD 147 (228)
Q Consensus 72 ~~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~----~~~~~~~~~~aL~dC~ely~~ 147 (228)
..+|+.|+||++|+++|++++.+. .+|.++++++|++++.++.++...+.++.. ..+.+++++.|++||+|++++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 468999999999999999887653 589999999999999999999999998863 224678899999999999999
Q ss_pred HHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchh-hhHHHHHHHHHHHHHHHHHHHH
Q 027094 148 SVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGK-VVRAQIVKIAHMTSNALALINS 222 (228)
Q Consensus 148 avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~-~v~~~~~~~~~L~SnaLAii~~ 222 (228)
++|+|++++.+|+..+. ......+|++||||||||||+||+|||++.+..-+ .|...+.++.+|+||+|||++.
T Consensus 82 SvD~L~~Sl~~L~~~~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 82 NVDYLETISSELKSAEL-MTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHHhcccc-ccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999985421 12345799999999999999999999986542112 2888899999999999999985
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=9.7e-24 Score=198.23 Aligned_cols=125 Identities=25% Similarity=0.409 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCChhHHHHHHHHHHHHhhHHHHHHHHHHHhcccccccccccHhH
Q 027094 96 QTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSP--GMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSD 173 (228)
Q Consensus 96 ~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~--~~~~~~~~aL~dC~ely~~avd~L~~a~~~L~~~~~~~~~~~~~d 173 (228)
..+|.+|++++|++++.++.++...++++.+.. +.+++++.|++||+|+|++++++|++++.+|+... ..++|
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~-----~~~~D 122 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSS-----PEFND 122 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchhH
Confidence 368999999999999999999999999886532 46889999999999999999999999999988521 24799
Q ss_pred HHHHHHHHhcchhHHHhhcCCCC------Cchh---hhHHHHHHHHHHHHHHHHHHHHhhh
Q 027094 174 IQTWVSAALTDETTCSDGFEKNT------VNGK---VVRAQIVKIAHMTSNALALINSYAS 225 (228)
Q Consensus 174 ~~twLSAAlt~~~TC~DgF~~~~------~~~~---~v~~~~~~~~~L~SnaLAii~~l~~ 225 (228)
++|||||||||++||+|||++.+ ..++ .|++.+.++.+|+||+|||++.++.
T Consensus 123 v~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 123 VSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred HHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999998654 1112 2888899999999999999998664
No 21
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.2e-22 Score=190.95 Aligned_cols=124 Identities=24% Similarity=0.359 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHhhHHHHHHHHHHHhccccccc--ccccHhHHHH
Q 027094 99 PKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASN--FELTMSDIQT 176 (228)
Q Consensus 99 p~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~~avd~L~~a~~~L~~~~~~~--~~~~~~d~~t 176 (228)
+..+++++|++++++++++...++++.+. ..+++++.|++||+|++++++|+|++++.+|+..+... .....+|++|
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~-~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~DvqT 115 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKV-FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRT 115 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHH
Confidence 46778889999999999999999988653 34788999999999999999999999999998543211 1345799999
Q ss_pred HHHHHhcchhHHHhhcCCCCCchh-hhHHHHHHHHHHHHHHHHHHHHh
Q 027094 177 WVSAALTDETTCSDGFEKNTVNGK-VVRAQIVKIAHMTSNALALINSY 223 (228)
Q Consensus 177 wLSAAlt~~~TC~DgF~~~~~~~~-~v~~~~~~~~~L~SnaLAii~~l 223 (228)
||||||||++||+|||++.+...+ .|...+.++.+|+||+|||++..
T Consensus 116 WLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~~ 163 (520)
T PLN02201 116 WLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHPP 163 (520)
T ss_pred HHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999987542212 28888999999999999999874
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.87 E-value=1.3e-21 Score=182.19 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=124.0
Q ss_pred HccccCCCChhchHHHHhccc----cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHH----HH
Q 027094 72 KTSCSSTTYPTLCYKSLARHA----SLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDC----LE 143 (228)
Q Consensus 72 ~~~C~~T~yp~~C~~sLs~~p----~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC----~e 143 (228)
...|..++||+.|...++... .....++..++.++|+.++.++..+...+..+......+++++.|++|| +|
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~e 81 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEE 81 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHH
Confidence 358999999999999987765 3333469999999999999999999999988866443378999999999 99
Q ss_pred HHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Q 027094 144 ELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVKIAHMTSNALALINSY 223 (228)
Q Consensus 144 ly~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~~~~~~L~SnaLAii~~l 223 (228)
+|++++|+|++++..+...+.... ...+|++||||||+|||+||+|||++.... ..|...+.++.+|+||+|||+..+
T Consensus 82 l~~~~~~~l~~s~~~~~~~~~~~~-~~~~d~~twLSa~lt~q~TC~dg~~~~~~~-~~~~~~l~~~~~~~sn~La~~~~~ 159 (509)
T PLN02488 82 MMESAKDRMIRSVEELLGGESPNL-GSYENVHTWLSGVLTSYITCIDEIGEGAYK-RRVEPELEDLISRARVALAIFISI 159 (509)
T ss_pred HHHHHHHHHHHHHHHhhccccccc-CcHHHHHHHHHHhHhchhhHhccccCcchH-HHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999963211111 235899999999999999999999643322 227888999999999999999876
Q ss_pred h
Q 027094 224 A 224 (228)
Q Consensus 224 ~ 224 (228)
.
T Consensus 160 ~ 160 (509)
T PLN02488 160 S 160 (509)
T ss_pred c
Confidence 5
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.85 E-value=3.4e-21 Score=180.75 Aligned_cols=126 Identities=25% Similarity=0.336 Sum_probs=97.4
Q ss_pred CChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 027094 79 TYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELRKSIGE 158 (228)
Q Consensus 79 ~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~~avd~L~~a~~~ 158 (228)
+||+.|..+|++.-.+ -|..+...+|.+.+....... .....+|++||+|+|++++|+|+++++.
T Consensus 58 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~Al~DC~ELlddavd~L~~S~~~ 122 (529)
T PLN02170 58 PSSSSKQGFLSSVQES---MNHALFARSLAFNLTLSHRTV------------QTHTFDPVNDCLELLDDTLDMLSRIVVI 122 (529)
T ss_pred CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhhhhhhc------------ccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999976433 377788888877665222111 1123679999999999999999999955
Q ss_pred hcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhh---hHHHHHHHHHHHHHHHHHHHHhhh
Q 027094 159 MGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKV---VRAQIVKIAHMTSNALALINSYAS 225 (228)
Q Consensus 159 L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~---v~~~~~~~~~L~SnaLAii~~l~~ 225 (228)
... .+..+|++|||||||||++||.|||++.+...++ +...+.++.+|+||+|||++.+..
T Consensus 123 ~~~------~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~ 186 (529)
T PLN02170 123 KHA------DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKS 186 (529)
T ss_pred hcc------ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 432 2468999999999999999999999876532222 667789999999999999987653
No 24
>PLN02916 pectinesterase family protein
Probab=99.70 E-value=9.9e-17 Score=150.12 Aligned_cols=87 Identities=26% Similarity=0.388 Sum_probs=72.7
Q ss_pred CCChhHHHHHHHHHHHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCCCCchhhhHHHHHH
Q 027094 129 GMKPREVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKNTVNGKVVRAQIVK 208 (228)
Q Consensus 129 ~~~~~~~~aL~dC~ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~~~~~~~v~~~~~~ 208 (228)
|.+-+...|++||+|+|++++++|++++..+... ..+|++|||||||||++||.|||++.+.. ....+.+
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~-------~~~DvqTWLSAALTnq~TClDGf~~~~~~---~~~~v~n 125 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESEARLSKLLVSHENF-------TVEDARTWLSGVLANHHTCLDGLEQKGQG---HKPMAHN 125 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHhhccC-------chHHHHHHHHHHHhCHhHHHHhhhhcccc---chHHHHH
Confidence 3456778999999999999999999999876531 47999999999999999999999865422 2345679
Q ss_pred HHHHHHHHHHHHHHhhh
Q 027094 209 IAHMTSNALALINSYAS 225 (228)
Q Consensus 209 ~~~L~SnaLAii~~l~~ 225 (228)
+.+|+||+|||++.+..
T Consensus 126 vt~ltSNaLAlv~~~~~ 142 (502)
T PLN02916 126 VTFVLSEALALYKKSRG 142 (502)
T ss_pred HHHHHHHHHHHhhhhhh
Confidence 99999999999988764
No 25
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=63.07 E-value=59 Score=24.01 Aligned_cols=52 Identities=13% Similarity=0.327 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHH-----hhcCCC--CChhHHHHHHHHHHHHhhHHHHHHHHH
Q 027094 105 ASLNVTLAMAKSTSAVMLK-----MSKSPG--MKPREVDAMQDCLEELSDSVDELRKSI 156 (228)
Q Consensus 105 ~al~~a~~~a~~a~~~v~~-----l~~~~~--~~~~~~~aL~dC~ely~~avd~L~~a~ 156 (228)
+....|+.+|.+....+.. -+..+| .++.++.|+.-|.+-|-+|-.-+.++.
T Consensus 26 VkqqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty 84 (97)
T KOG1733|consen 26 VKQQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTY 84 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566665554432 233333 578999999999999999988887764
No 26
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=45.47 E-value=58 Score=21.85 Aligned_cols=29 Identities=14% Similarity=0.412 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHHHhhHHHHHHHHHH
Q 027094 129 GMKPREVDAMQDCLEELSDSVDELRKSIG 157 (228)
Q Consensus 129 ~~~~~~~~aL~dC~ely~~avd~L~~a~~ 157 (228)
.++..+..+++.|.+-|-++-..+.+.+.
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999888877654
No 27
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=42.85 E-value=92 Score=20.14 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHhhHHHHHH
Q 027094 110 TLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSVDELR 153 (228)
Q Consensus 110 a~~~a~~a~~~v~~l~~~~~~~~~~~~aL~dC~ely~~avd~L~ 153 (228)
++...+.+.+.+..+.-. ..|+..+..++.|.+.++..+++|+
T Consensus 5 ~lAslK~~qA~Le~fal~-T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 5 TLASLKKAQADLETFALQ-TQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHhhHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 333444444444444322 2478888999999999988888875
No 28
>PLN02749 Uncharacterized protein At1g47420
Probab=37.44 E-value=2.1e+02 Score=23.26 Aligned_cols=62 Identities=16% Similarity=0.100 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCC
Q 027094 133 REVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKN 195 (228)
Q Consensus 133 ~~~~aL~dC~ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~ 195 (228)
..+.|-+-|.|+++ .+..|.-.+..+-...+.+.+.--+..+.-|-+|..-..+-+|.|...
T Consensus 62 nvfrAAeAveeFgG-~L~sLrmeidDl~GlsGEnv~PLPd~~~~Al~tay~rY~~YLdsFgp~ 123 (173)
T PLN02749 62 NVFRAAEAVEEFGG-TLVSLRMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGPE 123 (173)
T ss_pred HHHHHHHHHHHHhh-HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCch
Confidence 34567777877666 888899888888766555665556777888888888889999999764
No 29
>PF15284 PAGK: Phage-encoded virulence factor
Probab=34.45 E-value=32 Score=23.39 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=16.5
Q ss_pred chhHHHHHHHHHHHHHHhhcc
Q 027094 35 NHMLKYFLILLAIFSYLNSSS 55 (228)
Q Consensus 35 ~~~~~~~l~ll~~~~~~~~~~ 55 (228)
.|++-++|.++|+++...+++
T Consensus 2 kk~ksifL~l~~~LsA~~FSa 22 (61)
T PF15284_consen 2 KKFKSIFLALVFILSAAGFSA 22 (61)
T ss_pred hHHHHHHHHHHHHHHHhhhhH
Confidence 378889999999888777653
No 30
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=34.42 E-value=2.1e+02 Score=24.20 Aligned_cols=86 Identities=20% Similarity=0.192 Sum_probs=54.3
Q ss_pred ccccCCCChhchHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-hhHHHHHHHHHHHHhhHHHH
Q 027094 73 TSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMK-PREVDAMQDCLEELSDSVDE 151 (228)
Q Consensus 73 ~~C~~T~yp~~C~~sLs~~p~s~~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~~-~~~~~aL~dC~ely~~avd~ 151 (228)
+-|. +.|+..|.+ +.-+.+-+-.|-.+=++-+..-+..+..++...++.+..-.|.+ ......+++=.|.-.++.++
T Consensus 5 ~gCq-saYY~amEk-vG~hKRdilvdrVe~Ardsq~eaqeQF~sALe~f~sl~~~~ggdLe~~Y~~ln~~ye~s~~~A~~ 82 (201)
T PF11172_consen 5 TGCQ-SAYYSAMEK-VGVHKRDILVDRVEDARDSQQEAQEQFKSALEQFKSLVNFDGGDLEDKYNALNDEYESSEDAAEE 82 (201)
T ss_pred HHhH-HHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4577 568888876 55555444456667788888889999999999998888765543 23344444444444444444
Q ss_pred HHHHHHHhc
Q 027094 152 LRKSIGEMG 160 (228)
Q Consensus 152 L~~a~~~L~ 160 (228)
+.+-+..+.
T Consensus 83 V~~RI~~vE 91 (201)
T PF11172_consen 83 VSDRIDAVE 91 (201)
T ss_pred HHHHHHHHH
Confidence 444444433
No 31
>PF14290 DUF4370: Domain of unknown function (DUF4370)
Probab=33.78 E-value=2e+02 Score=24.55 Aligned_cols=62 Identities=18% Similarity=0.093 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHhcccccccccccHhHHHHHHHHHhcchhHHHhhcCCC
Q 027094 133 REVDAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDGFEKN 195 (228)
Q Consensus 133 ~~~~aL~dC~ely~~avd~L~~a~~~L~~~~~~~~~~~~~d~~twLSAAlt~~~TC~DgF~~~ 195 (228)
+...|-+-|.|+++. +..|.-+++.+-...+.+.+.--+..+.-|-+|..-..+-+|.|...
T Consensus 128 nvfRAAeAvEeFgG~-L~tLrm~idDl~GlsGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~ 189 (239)
T PF14290_consen 128 NVFRAAEAVEEFGGI-LVTLRMEIDDLCGLSGENVKPLPDYIENALRTAYKRYMTYLDSFGPD 189 (239)
T ss_pred HHHHHHHHHHHhhhh-HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCch
Confidence 345667778666555 88898888888766555665556778888888988899999999754
No 32
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=28.79 E-value=36 Score=25.19 Aligned_cols=6 Identities=50% Similarity=0.678 Sum_probs=2.3
Q ss_pred HHHHHH
Q 027094 41 FLILLA 46 (228)
Q Consensus 41 ~l~ll~ 46 (228)
+|+|.+
T Consensus 6 ~llL~l 11 (95)
T PF07172_consen 6 FLLLGL 11 (95)
T ss_pred HHHHHH
Confidence 344333
No 33
>PF13198 DUF4014: Protein of unknown function (DUF4014)
Probab=26.92 E-value=74 Score=22.36 Aligned_cols=21 Identities=10% Similarity=0.140 Sum_probs=16.4
Q ss_pred cchhHHHHHHHHHHHHHHhhc
Q 027094 34 SNHMLKYFLILLAIFSYLNSS 54 (228)
Q Consensus 34 ~~~~~~~~l~ll~~~~~~~~~ 54 (228)
+..++.++||+++++.+++..
T Consensus 11 rrSr~~efLF~ilfIvlmipI 31 (72)
T PF13198_consen 11 RRSRKTEFLFFILFIVLMIPI 31 (72)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 455778999999999888543
No 34
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.33 E-value=3.4e+02 Score=22.79 Aligned_cols=58 Identities=14% Similarity=0.233 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ChhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 027094 96 QTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGM-KPREVDAMQDCLEELSDSVDELRKSIGE 158 (228)
Q Consensus 96 ~~dp~~L~~~al~~a~~~a~~a~~~v~~l~~~~~~-~~~~~~aL~dC~ely~~avd~L~~a~~~ 158 (228)
..||.-|..+-+ .++...+.+..++..-+. -.....---+|++.|.++|+.|.+++.+
T Consensus 121 ~vDp~VL~DlE~-----~~~el~~~vD~llr~lgg~lh~is~lt~~~vq~yr~aV~kl~d~~Da 179 (222)
T KOG4514|consen 121 EVDPSVLSDLEL-----EAQELASSVDNLLRNLGGLLHSISSLTADNVQVYRNAVNKLTDTLDA 179 (222)
T ss_pred CCChHHHHHHHH-----HHHHHHHHHHHHHHHhhhHHHHHHHhhhhHHHHHHHHHHHHHHHhhh
Confidence 357776654433 345555566666553321 1233445568999999999999988764
No 35
>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology. Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane
Probab=24.33 E-value=4.5e+02 Score=26.79 Aligned_cols=22 Identities=18% Similarity=0.309 Sum_probs=14.1
Q ss_pred cHhHHHHHHHHHhcc-hh--HHHhh
Q 027094 170 TMSDIQTWVSAALTD-ET--TCSDG 191 (228)
Q Consensus 170 ~~~d~~twLSAAlt~-~~--TC~Dg 191 (228)
...+++.-|+.++.+ -. .|.+-
T Consensus 275 ~L~~vK~~L~~~l~~~C~~~~C~~i 299 (806)
T PF05478_consen 275 GLRGVKRDLNNTLQDLCTNRECNSI 299 (806)
T ss_pred HHHHHHHHHHHHHHhhCCChhhHHH
Confidence 466777777777776 22 36653
No 36
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=23.59 E-value=60 Score=23.75 Aligned_cols=26 Identities=12% Similarity=0.366 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHhcc
Q 027094 136 DAMQDCLEELSDSVDELRKSIGEMGL 161 (228)
Q Consensus 136 ~aL~dC~ely~~avd~L~~a~~~L~~ 161 (228)
.-.+||.|-+-+-+.++++|.+++++
T Consensus 65 ATfnDc~eA~veL~~~IkEAr~~L~r 90 (95)
T KOG4841|consen 65 ATFNDCEEAAVELQSQIKEARADLAR 90 (95)
T ss_pred eccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999885
No 37
>PF10968 DUF2770: Protein of unknown function (DUF2770); InterPro: IPR024494 Members in this family of proteins from Enterobacteria are annotated as YceO; however, currently no function is known.
Probab=21.99 E-value=79 Score=19.19 Aligned_cols=22 Identities=32% Similarity=0.309 Sum_probs=15.0
Q ss_pred HHHHHhhhhccCCCccchhHHHHHHHHHHH
Q 027094 19 LIISKVRERDMEGSSSNHMLKYFLILLAIF 48 (228)
Q Consensus 19 ~~~~~~~~~~m~~~~~~~~~~~~l~ll~~~ 48 (228)
.+|..||||-|= |++|.+++..
T Consensus 7 ~~inNiReHlml--------Yi~Lw~lL~~ 28 (36)
T PF10968_consen 7 YLINNIREHLML--------YICLWLLLAA 28 (36)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHH
Confidence 357889999875 5666666544
Done!