Query 027096
Match_columns 228
No_of_seqs 142 out of 1791
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 04:54:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027096.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027096hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 6.6E-43 1.4E-47 289.0 22.6 218 8-227 220-444 (537)
2 KOG1177 Long chain fatty acid 100.0 9.1E-41 2E-45 262.8 15.5 223 4-227 266-497 (596)
3 PRK06334 long chain fatty acid 100.0 2.7E-39 5.9E-44 273.8 23.5 221 6-227 217-446 (539)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 1.9E-39 4.1E-44 274.0 21.7 221 6-227 205-437 (534)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 7.1E-39 1.5E-43 263.9 20.2 215 6-227 206-432 (528)
6 PLN02574 4-coumarate--CoA liga 100.0 2.4E-37 5.1E-42 263.2 23.8 217 11-227 242-466 (560)
7 PRK07788 acyl-CoA synthetase; 100.0 2.4E-37 5.2E-42 262.6 22.0 218 6-227 241-463 (549)
8 PF00501 AMP-binding: AMP-bind 100.0 9.9E-38 2.1E-42 256.6 17.2 207 14-220 197-417 (417)
9 PLN02246 4-coumarate--CoA liga 100.0 1.7E-36 3.7E-41 256.8 23.8 222 6-227 217-448 (537)
10 PRK07529 AMP-binding domain pr 100.0 1.8E-36 3.8E-41 260.9 22.9 219 6-227 247-481 (632)
11 PLN02654 acetate-CoA ligase 100.0 1.1E-36 2.4E-41 263.3 21.7 222 5-227 309-549 (666)
12 PRK13295 cyclohexanecarboxylat 100.0 3.4E-36 7.4E-41 255.5 23.4 220 6-227 231-455 (547)
13 PLN02860 o-succinylbenzoate-Co 100.0 2.4E-36 5.2E-41 257.2 20.8 215 6-227 206-450 (563)
14 PRK06839 acyl-CoA synthetase; 100.0 5.8E-36 1.3E-40 251.1 22.8 218 6-227 183-407 (496)
15 PLN02614 long-chain acyl-CoA s 100.0 1.4E-36 3.1E-41 262.4 19.1 214 9-227 265-533 (666)
16 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1E-35 2.3E-40 252.0 23.5 220 6-227 229-453 (538)
17 PLN03051 acyl-activating enzym 100.0 5.7E-36 1.2E-40 251.4 21.5 219 6-227 153-393 (499)
18 TIGR02316 propion_prpE propion 100.0 7.3E-36 1.6E-40 257.1 22.7 221 6-227 267-508 (628)
19 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1E-35 2.2E-40 256.2 23.3 221 6-227 271-511 (625)
20 PRK07656 long-chain-fatty-acid 100.0 1E-35 2.3E-40 250.5 22.7 222 5-227 199-428 (513)
21 PTZ00342 acyl-CoA synthetase; 100.0 4E-36 8.7E-41 260.4 20.4 212 11-227 345-607 (746)
22 PRK08314 long-chain-fatty-acid 100.0 8.8E-36 1.9E-40 252.9 22.1 219 6-227 224-452 (546)
23 PRK08316 acyl-CoA synthetase; 100.0 9.4E-36 2E-40 251.3 21.3 220 6-227 205-431 (523)
24 PRK07638 acyl-CoA synthetase; 100.0 2.5E-35 5.5E-40 246.9 23.6 215 6-227 177-397 (487)
25 PRK00174 acetyl-CoA synthetase 100.0 2.1E-35 4.6E-40 254.7 23.6 221 6-227 280-519 (637)
26 PRK06145 acyl-CoA synthetase; 100.0 1.8E-35 3.8E-40 248.4 22.6 220 6-227 183-409 (497)
27 PRK13382 acyl-CoA synthetase; 100.0 2.3E-35 5E-40 249.9 22.5 216 7-227 231-452 (537)
28 PTZ00237 acetyl-CoA synthetase 100.0 9.4E-36 2E-40 256.8 20.0 217 7-227 290-528 (647)
29 PRK08633 2-acyl-glycerophospho 100.0 1.3E-35 2.8E-40 270.5 21.9 222 5-227 815-1055(1146)
30 PRK08315 AMP-binding domain pr 100.0 2.5E-35 5.4E-40 250.7 21.3 223 5-227 232-463 (559)
31 PLN02736 long-chain acyl-CoA s 100.0 1E-35 2.3E-40 257.0 18.8 217 6-227 255-524 (651)
32 PRK06060 acyl-CoA synthetase; 100.0 4E-35 8.7E-40 255.4 22.5 216 7-227 181-401 (705)
33 PRK04319 acetyl-CoA synthetase 100.0 5.4E-35 1.2E-39 249.2 22.4 218 6-227 239-468 (570)
34 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.7E-35 1.4E-39 246.6 22.3 219 6-227 217-444 (527)
35 PLN02330 4-coumarate--CoA liga 100.0 7.3E-35 1.6E-39 247.3 22.0 216 12-227 226-453 (546)
36 PLN02861 long-chain-fatty-acid 100.0 2.9E-35 6.4E-40 254.2 18.7 213 10-227 263-530 (660)
37 PRK13383 acyl-CoA synthetase; 100.0 1.3E-34 2.9E-39 244.2 22.1 217 7-227 211-432 (516)
38 PRK07514 malonyl-CoA synthase; 100.0 1.5E-34 3.2E-39 243.1 21.2 218 5-227 189-413 (504)
39 PRK10524 prpE propionyl-CoA sy 100.0 1.7E-34 3.6E-39 248.8 21.9 221 6-227 268-509 (629)
40 PRK03640 O-succinylbenzoic aci 100.0 1.9E-34 4.1E-39 241.3 21.4 215 6-227 175-396 (483)
41 PRK12583 acyl-CoA synthetase; 100.0 2.5E-34 5.4E-39 244.6 22.1 221 6-227 235-464 (558)
42 PRK07786 long-chain-fatty-acid 100.0 2.3E-34 5E-39 244.0 21.3 217 7-227 209-435 (542)
43 PRK06087 short chain acyl-CoA 100.0 2.5E-34 5.3E-39 244.1 21.1 219 6-227 221-446 (547)
44 PRK09088 acyl-CoA synthetase; 100.0 3.6E-34 7.7E-39 240.0 21.8 218 7-227 170-397 (488)
45 PRK05605 long-chain-fatty-acid 100.0 3.2E-34 6.8E-39 244.7 21.7 213 12-227 261-481 (573)
46 PRK07787 acyl-CoA synthetase; 100.0 4E-34 8.7E-39 238.7 21.5 217 5-227 161-387 (471)
47 PRK06188 acyl-CoA synthetase; 100.0 4.2E-34 9.2E-39 241.5 21.1 217 6-227 202-429 (524)
48 PRK06187 long-chain-fatty-acid 100.0 4.3E-34 9.2E-39 241.0 21.1 219 5-227 200-431 (521)
49 PRK09274 peptide synthase; Pro 100.0 4.5E-34 9.9E-39 242.7 20.7 215 5-227 207-456 (552)
50 PRK05677 long-chain-fatty-acid 100.0 9.7E-34 2.1E-38 241.2 22.6 211 13-227 251-469 (562)
51 TIGR01733 AA-adenyl-dom amino 100.0 8.5E-34 1.8E-38 232.5 21.4 218 5-227 153-391 (408)
52 PRK05851 long-chain-fatty-acid 100.0 1.8E-34 4E-39 243.8 17.8 221 5-227 185-431 (525)
53 PRK08043 bifunctional acyl-[ac 100.0 6.2E-34 1.4E-38 248.3 21.4 213 5-227 398-627 (718)
54 COG1022 FAA1 Long-chain acyl-C 100.0 1.4E-34 3.1E-39 241.7 16.4 205 6-227 225-486 (613)
55 PRK07868 acyl-CoA synthetase; 100.0 5.6E-34 1.2E-38 255.0 20.9 215 6-227 639-872 (994)
56 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.1E-33 2.4E-38 238.4 21.4 218 6-227 195-430 (515)
57 PRK10946 entE enterobactin syn 100.0 1.6E-33 3.4E-38 238.7 22.0 220 5-227 215-445 (536)
58 PRK12406 long-chain-fatty-acid 100.0 2.3E-33 5.1E-38 236.2 22.8 218 6-227 189-415 (509)
59 PRK12492 long-chain-fatty-acid 100.0 2.4E-33 5.2E-38 238.8 23.0 211 14-227 259-477 (562)
60 TIGR03443 alpha_am_amid L-amin 100.0 7.9E-34 1.7E-38 262.8 21.6 219 5-227 448-714 (1389)
61 PRK12316 peptide synthase; Pro 100.0 8.4E-34 1.8E-38 282.4 22.4 220 4-227 687-922 (5163)
62 PRK06710 long-chain-fatty-acid 100.0 2E-33 4.3E-38 239.3 21.6 213 12-227 248-467 (563)
63 PRK12467 peptide synthase; Pro 100.0 7E-34 1.5E-38 279.3 21.3 220 4-227 3269-3507(3956)
64 COG1021 EntE Peptide arylation 100.0 8.4E-35 1.8E-39 224.9 11.5 222 2-226 219-449 (542)
65 PRK13390 acyl-CoA synthetase; 100.0 2.8E-33 6.2E-38 235.3 21.5 217 6-227 188-415 (501)
66 PRK06155 crotonobetaine/carnit 100.0 4.5E-33 9.8E-38 236.1 22.2 214 5-227 213-436 (542)
67 PRK05852 acyl-CoA synthetase; 100.0 2.4E-33 5.2E-38 237.5 20.5 218 6-227 210-444 (534)
68 PRK06164 acyl-CoA synthetase; 100.0 2.6E-33 5.6E-38 237.5 20.7 219 5-227 214-442 (540)
69 TIGR02262 benz_CoA_lig benzoat 100.0 4.3E-33 9.3E-38 234.6 21.8 217 6-227 196-420 (508)
70 PRK10252 entF enterobactin syn 100.0 3.5E-33 7.7E-38 257.2 22.6 221 4-227 630-873 (1296)
71 PRK07769 long-chain-fatty-acid 100.0 8.4E-34 1.8E-38 244.5 16.9 220 6-227 214-499 (631)
72 PRK07008 long-chain-fatty-acid 100.0 7.4E-33 1.6E-37 234.7 22.3 218 6-227 212-445 (539)
73 TIGR01734 D-ala-DACP-lig D-ala 100.0 6.9E-33 1.5E-37 232.9 21.7 219 6-227 175-409 (502)
74 PLN03052 acetate--CoA ligase; 100.0 7.6E-33 1.7E-37 240.7 22.6 218 7-227 391-625 (728)
75 PRK05857 acyl-CoA synthetase; 100.0 6.2E-33 1.3E-37 235.2 20.8 215 8-227 209-438 (540)
76 PRK07470 acyl-CoA synthetase; 100.0 5.7E-33 1.2E-37 234.9 20.5 214 9-227 202-430 (528)
77 PRK13391 acyl-CoA synthetase; 100.0 1.7E-32 3.7E-37 231.1 22.8 216 6-227 193-418 (511)
78 PRK08008 caiC putative crotono 100.0 1.8E-32 3.9E-37 231.3 22.7 215 9-227 210-434 (517)
79 PRK12467 peptide synthase; Pro 100.0 5.5E-33 1.2E-37 273.1 22.5 221 4-227 1750-1990(3956)
80 PRK07059 Long-chain-fatty-acid 100.0 2.2E-32 4.8E-37 232.6 22.2 212 13-227 252-471 (557)
81 KOG1175 Acyl-CoA synthetase [L 100.0 5.3E-33 1.1E-37 230.4 17.6 224 3-227 271-511 (626)
82 PRK06178 acyl-CoA synthetase; 100.0 2.9E-32 6.4E-37 232.3 22.7 219 8-227 246-478 (567)
83 PRK12316 peptide synthase; Pro 100.0 8.8E-33 1.9E-37 275.1 22.3 221 4-227 4726-4965(5163)
84 PRK08276 long-chain-fatty-acid 100.0 2.2E-32 4.8E-37 229.9 21.4 212 11-227 185-405 (502)
85 PLN02387 long-chain-fatty-acid 100.0 7.6E-33 1.6E-37 240.3 18.6 216 8-227 287-572 (696)
86 PRK08180 feruloyl-CoA synthase 100.0 1.2E-32 2.7E-37 236.5 19.7 205 12-226 251-480 (614)
87 PRK05691 peptide synthase; Val 100.0 1.5E-32 3.3E-37 271.7 22.3 219 5-227 1306-1541(4334)
88 TIGR03205 pimA dicarboxylate-- 100.0 4.6E-32 9.9E-37 230.0 22.4 214 11-227 236-457 (541)
89 PRK06018 putative acyl-CoA syn 100.0 6.7E-32 1.4E-36 229.0 23.0 218 6-227 213-446 (542)
90 PTZ00216 acyl-CoA synthetase; 100.0 8.5E-33 1.8E-37 240.4 17.8 210 10-227 307-573 (700)
91 PRK04813 D-alanine--poly(phosp 100.0 4.9E-32 1.1E-36 227.7 21.7 220 5-227 176-411 (503)
92 PLN02430 long-chain-fatty-acid 100.0 2.4E-32 5.1E-37 236.0 19.7 214 9-227 262-530 (660)
93 PRK07445 O-succinylbenzoic aci 100.0 1.8E-32 3.9E-37 227.5 18.2 205 7-227 155-360 (452)
94 KOG1256 Long-chain acyl-CoA sy 100.0 1.4E-32 3.1E-37 227.7 17.4 211 12-227 301-564 (691)
95 PRK03584 acetoacetyl-CoA synth 100.0 7.3E-32 1.6E-36 233.4 22.5 217 6-227 298-534 (655)
96 PRK08751 putative long-chain f 100.0 6E-32 1.3E-36 230.1 21.4 212 13-227 254-473 (560)
97 PRK12476 putative fatty-acid-- 100.0 1.3E-32 2.9E-37 236.3 15.1 218 7-227 228-511 (612)
98 PRK07867 acyl-CoA synthetase; 100.0 2.2E-31 4.8E-36 225.2 22.3 213 5-227 185-417 (529)
99 PRK08974 long-chain-fatty-acid 100.0 2.4E-31 5.2E-36 226.5 22.3 213 11-227 248-468 (560)
100 PRK06814 acylglycerophosphoeth 100.0 2.6E-31 5.6E-36 242.3 23.2 213 5-227 826-1046(1140)
101 PRK05691 peptide synthase; Val 100.0 1.2E-31 2.6E-36 265.4 22.5 218 4-226 3901-4137(4334)
102 PRK12582 acyl-CoA synthetase; 100.0 8.4E-32 1.8E-36 231.8 18.6 205 13-227 264-493 (624)
103 PRK05620 long-chain-fatty-acid 100.0 3.9E-31 8.4E-36 225.8 21.5 218 6-227 217-466 (576)
104 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.5E-31 7.5E-36 228.8 20.9 217 6-227 299-535 (652)
105 PRK13388 acyl-CoA synthetase; 100.0 6.7E-31 1.5E-35 222.8 21.1 214 5-227 183-416 (540)
106 TIGR01923 menE O-succinylbenzo 100.0 1E-30 2.3E-35 216.1 19.2 207 5-227 144-356 (436)
107 PRK08308 acyl-CoA synthetase; 100.0 2.4E-30 5.3E-35 212.7 20.7 194 5-227 134-327 (414)
108 PRK07768 long-chain-fatty-acid 100.0 1.6E-30 3.5E-35 220.8 19.6 221 6-227 186-450 (545)
109 PLN03102 acyl-activating enzym 100.0 5.1E-30 1.1E-34 219.0 21.4 214 8-227 222-456 (579)
110 PLN02479 acetate-CoA ligase 100.0 4.9E-30 1.1E-34 218.7 20.7 218 6-227 229-466 (567)
111 PRK08279 long-chain-acyl-CoA s 100.0 5.7E-30 1.2E-34 219.7 20.7 215 5-227 232-475 (600)
112 PRK09192 acyl-CoA synthetase; 100.0 2.6E-30 5.5E-35 220.9 17.8 219 7-227 212-474 (579)
113 PRK05850 acyl-CoA synthetase; 100.0 7.2E-30 1.6E-34 218.2 17.8 215 10-227 204-472 (578)
114 PRK07798 acyl-CoA synthetase; 100.0 1.8E-28 3.8E-33 207.5 23.4 210 11-227 217-444 (533)
115 PRK08162 acyl-CoA synthetase; 100.0 8.5E-29 1.8E-33 210.2 21.1 217 7-227 217-452 (545)
116 TIGR02155 PA_CoA_ligase phenyl 100.0 2.2E-28 4.7E-33 201.6 19.5 209 7-227 113-331 (422)
117 PRK09029 O-succinylbenzoic aci 100.0 2.9E-28 6.3E-33 202.8 19.6 194 5-227 168-367 (458)
118 PRK07824 O-succinylbenzoic aci 100.0 1.8E-27 3.8E-32 192.3 20.9 187 12-227 73-269 (358)
119 KOG1180 Acyl-CoA synthetase [L 99.9 8.7E-27 1.9E-31 187.1 11.1 214 8-225 274-550 (678)
120 KOG1179 Very long-chain acyl-C 99.9 3.8E-24 8.2E-29 172.5 19.1 220 5-226 275-523 (649)
121 TIGR03335 F390_ftsA coenzyme F 99.9 5.6E-24 1.2E-28 176.1 19.1 208 8-227 125-343 (445)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.9 5E-24 1.1E-28 172.8 17.8 181 6-227 129-311 (386)
123 COG1020 EntF Non-ribosomal pep 99.9 3.1E-22 6.7E-27 173.2 19.6 219 5-225 399-630 (642)
124 COG1541 PaaK Coenzyme F390 syn 99.9 3.6E-21 7.8E-26 154.0 17.0 207 8-227 129-347 (438)
125 PTZ00297 pantothenate kinase; 99.7 3.8E-16 8.3E-21 142.6 13.2 187 9-227 641-873 (1452)
126 TIGR02304 aden_form_hyp probab 99.6 3.2E-14 7E-19 116.4 12.2 155 48-227 174-345 (430)
127 KOG3628 Predicted AMP-binding 99.0 5.5E-09 1.2E-13 91.3 13.3 219 8-227 979-1265(1363)
128 KOG1178 Non-ribosomal peptide 99.0 9.7E-09 2.1E-13 91.1 13.2 219 4-225 228-488 (1032)
129 PF04443 LuxE: Acyl-protein sy 98.8 1.6E-07 3.5E-12 75.7 13.9 163 36-215 162-350 (365)
130 KOG3628 Predicted AMP-binding 98.7 1.8E-07 3.9E-12 82.2 10.2 216 6-221 303-601 (1363)
131 TIGR03089 conserved hypothetic 98.6 1.1E-07 2.3E-12 72.1 5.9 57 6-63 171-227 (227)
132 PRK09188 serine/threonine prot 98.4 3.6E-07 7.9E-12 73.6 3.7 34 189-227 207-244 (365)
133 PF03321 GH3: GH3 auxin-respon 98.0 5.9E-05 1.3E-09 64.2 9.4 126 86-226 266-408 (528)
134 PLN02620 indole-3-acetic acid- 97.4 0.0029 6.2E-08 54.3 11.3 127 84-226 301-460 (612)
135 PLN02249 indole-3-acetic acid- 97.4 0.0086 1.9E-07 51.7 14.0 122 86-226 301-447 (597)
136 PLN02247 indole-3-acetic acid- 97.3 0.0028 6.2E-08 54.4 10.2 128 84-226 290-454 (606)
137 PRK02261 methylaspartate mutas 86.1 7.9 0.00017 26.8 7.7 102 14-122 5-119 (137)
138 KOG1177 Long chain fatty acid 84.1 8.9 0.00019 32.5 8.1 88 7-96 96-198 (596)
139 PLN02736 long-chain acyl-CoA s 82.4 16 0.00034 32.4 9.9 83 7-95 97-180 (651)
140 PLN02387 long-chain-fatty-acid 80.3 21 0.00045 32.1 9.9 84 7-96 125-209 (696)
141 PTZ00342 acyl-CoA synthetase; 79.4 25 0.00055 31.9 10.1 82 8-95 114-207 (746)
142 TIGR02370 pyl_corrinoid methyl 79.3 9.8 0.00021 28.2 6.4 90 14-105 85-183 (197)
143 PLN02614 long-chain acyl-CoA s 77.6 34 0.00073 30.6 10.3 68 7-76 98-166 (666)
144 PLN02430 long-chain-fatty-acid 76.8 35 0.00076 30.4 10.2 67 8-76 96-163 (660)
145 PRK07788 acyl-CoA synthetase; 73.5 25 0.00054 30.3 8.3 66 8-75 94-160 (549)
146 PLN03102 acyl-activating enzym 73.2 25 0.00053 30.7 8.3 63 8-72 59-122 (579)
147 PF03808 Glyco_tran_WecB: Glyc 73.2 7.7 0.00017 28.0 4.4 77 37-119 3-80 (172)
148 PRK04319 acetyl-CoA synthetase 72.2 30 0.00066 30.0 8.6 66 7-74 92-158 (570)
149 PF00501 AMP-binding: AMP-bind 72.1 20 0.00043 29.5 7.2 59 7-67 40-99 (417)
150 KOG1176 Acyl-CoA synthetase [L 71.9 20 0.00044 31.1 7.2 68 8-77 67-135 (537)
151 PRK06839 acyl-CoA synthetase; 71.9 28 0.0006 29.4 8.1 67 7-75 47-114 (496)
152 PTZ00237 acetyl-CoA synthetase 71.1 19 0.00042 31.9 7.2 61 7-69 111-172 (647)
153 PRK13383 acyl-CoA synthetase; 70.2 30 0.00066 29.5 8.1 66 8-75 80-146 (516)
154 TIGR03098 ligase_PEP_1 acyl-Co 70.0 29 0.00063 29.4 7.9 65 8-74 45-110 (515)
155 PLN02861 long-chain-fatty-acid 69.9 37 0.0008 30.3 8.7 66 8-75 97-163 (660)
156 TIGR01733 AA-adenyl-dom amino 69.5 26 0.00056 28.6 7.3 66 8-75 20-86 (408)
157 PRK08314 long-chain-fatty-acid 69.2 34 0.00074 29.3 8.2 66 8-75 56-122 (546)
158 PRK08316 acyl-CoA synthetase; 69.1 33 0.00071 29.1 8.1 66 8-75 56-122 (523)
159 PLN02654 acetate-CoA ligase 69.0 24 0.00052 31.5 7.3 62 7-70 139-201 (666)
160 PRK06187 long-chain-fatty-acid 68.8 39 0.00084 28.6 8.4 66 8-75 51-117 (521)
161 PRK05605 long-chain-fatty-acid 68.6 34 0.00074 29.6 8.2 67 7-75 76-143 (573)
162 PRK07514 malonyl-CoA synthase; 68.0 40 0.00086 28.6 8.3 65 8-74 48-113 (504)
163 cd02070 corrinoid_protein_B12- 67.4 24 0.00052 26.1 6.0 88 15-104 85-180 (201)
164 PRK06155 crotonobetaine/carnit 67.1 45 0.00097 28.8 8.5 67 8-76 66-133 (542)
165 PLN02246 4-coumarate--CoA liga 67.1 34 0.00074 29.3 7.8 65 7-73 69-134 (537)
166 PRK08751 putative long-chain f 66.2 39 0.00085 29.1 8.0 65 7-73 70-135 (560)
167 TIGR01217 ac_ac_CoA_syn acetoa 66.2 28 0.0006 31.0 7.2 61 7-69 133-194 (652)
168 TIGR02316 propion_prpE propion 65.8 30 0.00066 30.5 7.3 61 7-69 102-163 (628)
169 PLN02574 4-coumarate--CoA liga 65.5 44 0.00096 28.9 8.2 66 8-75 87-153 (560)
170 cd04910 ACT_AK-Ectoine_1 ACT d 65.0 23 0.00049 21.4 4.5 51 51-116 19-69 (71)
171 PRK09274 peptide synthase; Pro 64.5 33 0.00071 29.6 7.2 60 8-69 61-121 (552)
172 PRK07656 long-chain-fatty-acid 64.1 53 0.0011 27.8 8.3 64 8-73 50-114 (513)
173 cd02069 methionine_synthase_B1 63.2 62 0.0013 24.3 8.9 89 14-106 90-186 (213)
174 PRK08008 caiC putative crotono 63.2 53 0.0011 28.0 8.2 65 7-73 56-121 (517)
175 PRK08279 long-chain-acyl-CoA s 63.2 59 0.0013 28.4 8.6 66 8-75 82-148 (600)
176 TIGR02188 Ac_CoA_lig_AcsA acet 62.7 34 0.00074 30.1 7.1 62 7-70 107-169 (625)
177 PRK06334 long chain fatty acid 62.1 28 0.00061 30.0 6.3 66 8-75 62-128 (539)
178 PRK03584 acetoacetyl-CoA synth 62.1 38 0.00082 30.1 7.3 60 8-69 134-194 (655)
179 PRK07798 acyl-CoA synthetase; 61.5 69 0.0015 27.2 8.6 66 8-75 48-114 (533)
180 PLN03052 acetate--CoA ligase; 61.3 41 0.00089 30.5 7.4 62 7-70 227-289 (728)
181 COG1922 WecG Teichoic acid bio 61.0 50 0.0011 25.6 6.7 81 32-117 57-138 (253)
182 PRK10524 prpE propionyl-CoA sy 61.0 40 0.00087 29.7 7.2 61 7-69 103-164 (629)
183 PRK08162 acyl-CoA synthetase; 60.8 52 0.0011 28.2 7.8 66 8-75 63-129 (545)
184 PRK05677 long-chain-fatty-acid 60.5 58 0.0012 28.2 8.0 63 8-72 70-133 (562)
185 PTZ00216 acyl-CoA synthetase; 59.9 63 0.0014 29.1 8.3 68 7-76 140-208 (700)
186 PLN02860 o-succinylbenzoate-Co 59.7 42 0.00091 29.1 7.0 60 8-69 52-112 (563)
187 TIGR02262 benz_CoA_lig benzoat 59.4 84 0.0018 26.7 8.7 66 7-74 49-115 (508)
188 PF00818 Ice_nucleation: Ice n 58.6 4.8 0.00011 16.5 0.5 9 119-127 1-9 (16)
189 PRK12406 long-chain-fatty-acid 58.5 66 0.0014 27.3 7.9 66 8-75 31-97 (509)
190 PRK05620 long-chain-fatty-acid 58.2 54 0.0012 28.5 7.4 66 8-75 59-125 (576)
191 PRK05857 acyl-CoA synthetase; 58.0 51 0.0011 28.4 7.2 62 8-71 61-123 (540)
192 PRK13388 acyl-CoA synthetase; 58.0 75 0.0016 27.4 8.3 64 8-73 46-111 (540)
193 PRK00174 acetyl-CoA synthetase 57.8 51 0.0011 29.1 7.3 60 8-69 118-178 (637)
194 PRK08276 long-chain-fatty-acid 57.4 66 0.0014 27.2 7.7 66 8-75 31-97 (502)
195 PRK06178 acyl-CoA synthetase; 57.1 76 0.0016 27.5 8.2 66 8-75 78-144 (567)
196 PRK07470 acyl-CoA synthetase; 57.0 76 0.0016 27.1 8.1 63 8-72 52-115 (528)
197 PRK06087 short chain acyl-CoA 56.7 54 0.0012 28.2 7.2 59 8-68 69-128 (547)
198 PRK13382 acyl-CoA synthetase; 56.2 91 0.002 26.8 8.5 63 8-72 88-151 (537)
199 PLN02479 acetate-CoA ligase 55.8 89 0.0019 27.1 8.4 63 8-72 65-128 (567)
200 PRK07867 acyl-CoA synthetase; 55.6 68 0.0015 27.6 7.6 64 8-73 49-113 (529)
201 PF04915 DltD_N: DltD N-termin 55.2 6.5 0.00014 23.1 0.9 18 111-128 25-42 (62)
202 TIGR01923 menE O-succinylbenzo 55.1 71 0.0015 26.3 7.5 61 8-70 19-80 (436)
203 PLN02330 4-coumarate--CoA liga 55.0 59 0.0013 28.0 7.1 64 8-73 75-139 (546)
204 COG1167 ARO8 Transcriptional r 54.4 41 0.00088 28.6 5.9 58 8-70 174-235 (459)
205 PF11142 DUF2917: Protein of u 53.8 44 0.00095 19.6 5.2 34 170-211 25-58 (63)
206 PTZ00297 pantothenate kinase; 53.7 1.5E+02 0.0032 29.6 9.8 81 7-96 476-556 (1452)
207 PRK13295 cyclohexanecarboxylat 53.6 61 0.0013 27.9 7.0 60 8-69 75-135 (547)
208 PRK07059 Long-chain-fatty-acid 53.5 87 0.0019 27.0 8.0 63 8-72 68-131 (557)
209 PRK03640 O-succinylbenzoic aci 52.6 1.1E+02 0.0024 25.6 8.4 63 8-72 47-110 (483)
210 cd07131 ALDH_AldH-CAJ73105 Unc 52.6 84 0.0018 26.8 7.5 49 12-60 135-188 (478)
211 COG0365 Acs Acyl-coenzyme A sy 52.4 42 0.00091 29.2 5.6 67 6-75 59-126 (528)
212 PRK08315 AMP-binding domain pr 52.2 75 0.0016 27.3 7.4 61 8-70 63-124 (559)
213 PRK09088 acyl-CoA synthetase; 52.1 75 0.0016 26.8 7.2 61 7-69 41-102 (488)
214 PRK06164 acyl-CoA synthetase; 51.3 71 0.0015 27.4 7.1 62 7-70 54-116 (540)
215 cd07124 ALDH_PutA-P5CDH-RocA D 50.8 1E+02 0.0022 26.6 7.8 58 12-69 166-230 (512)
216 PRK12583 acyl-CoA synthetase; 50.4 84 0.0018 27.0 7.4 61 8-70 65-126 (558)
217 PRK06018 putative acyl-CoA syn 50.4 79 0.0017 27.2 7.2 63 8-72 59-122 (542)
218 PRK07786 long-chain-fatty-acid 50.3 1.2E+02 0.0026 26.1 8.2 63 8-72 62-125 (542)
219 cd07109 ALDH_AAS00426 Uncharac 50.2 1.6E+02 0.0034 25.0 9.3 77 12-96 117-204 (454)
220 PRK12492 long-chain-fatty-acid 50.2 76 0.0016 27.5 7.1 61 8-70 70-131 (562)
221 PRK07008 long-chain-fatty-acid 50.1 1E+02 0.0022 26.6 7.8 64 8-73 59-123 (539)
222 PRK06188 acyl-CoA synthetase; 49.5 91 0.002 26.6 7.4 61 8-70 57-118 (524)
223 PRK06060 acyl-CoA synthetase; 49.3 1.1E+02 0.0023 27.6 8.0 62 8-71 50-112 (705)
224 PRK11904 bifunctional proline 49.2 87 0.0019 29.9 7.5 60 11-70 683-749 (1038)
225 PRK08974 long-chain-fatty-acid 49.0 88 0.0019 27.0 7.3 62 8-71 69-131 (560)
226 PRK12476 putative fatty-acid-- 48.5 1.4E+02 0.003 26.3 8.5 63 10-74 89-155 (612)
227 PRK07529 AMP-binding domain pr 48.3 75 0.0016 28.1 6.8 58 8-68 78-136 (632)
228 PRK06710 long-chain-fatty-acid 47.8 83 0.0018 27.2 6.9 62 8-71 69-131 (563)
229 PRK05718 keto-hydroxyglutarate 47.8 1.2E+02 0.0026 22.8 8.3 84 32-124 80-166 (212)
230 PRK10411 DNA-binding transcrip 47.5 1.3E+02 0.0028 23.1 8.1 85 36-128 91-182 (240)
231 PRK05850 acyl-CoA synthetase; 47.4 1E+02 0.0022 26.7 7.5 63 11-75 57-123 (578)
232 PRK05852 acyl-CoA synthetase; 47.0 98 0.0021 26.5 7.2 58 8-67 63-121 (534)
233 TIGR00696 wecB_tagA_cpsF bacte 46.9 35 0.00075 24.8 3.8 75 37-117 3-78 (177)
234 PRK12582 acyl-CoA synthetase; 46.7 79 0.0017 27.9 6.7 60 8-69 100-165 (624)
235 PRK13391 acyl-CoA synthetase; 46.4 1.4E+02 0.0031 25.4 8.1 64 8-73 44-108 (511)
236 PRK09192 acyl-CoA synthetase; 46.2 1.5E+02 0.0032 25.9 8.2 65 8-74 69-141 (579)
237 cd07125 ALDH_PutA-P5CDH Delta( 43.9 2.2E+02 0.0047 24.7 9.4 49 11-59 166-219 (518)
238 cd02071 MM_CoA_mut_B12_BD meth 43.2 1E+02 0.0022 20.7 7.8 84 23-110 11-101 (122)
239 PF14779 BBS1: Ciliary BBSome 43.1 1.2E+02 0.0026 23.7 6.3 75 34-118 83-175 (257)
240 COG0318 CaiC Acyl-CoA syntheta 42.6 1.5E+02 0.0032 25.7 7.7 60 9-70 59-119 (534)
241 PF01060 DUF290: Transthyretin 42.4 80 0.0017 19.4 5.4 16 143-158 6-21 (80)
242 cd07141 ALDH_F1AB_F2_RALDH1 NA 42.0 1.9E+02 0.0041 24.8 8.1 48 12-59 145-197 (481)
243 PRK11809 putA trifunctional tr 41.8 1.4E+02 0.003 29.4 7.7 80 10-97 766-856 (1318)
244 TIGR03208 cyc_hxne_CoA_lg cycl 41.7 1.3E+02 0.0027 25.9 7.1 60 8-69 73-133 (538)
245 PF06543 Lac_bphage_repr: Lact 41.7 22 0.00047 19.5 1.5 22 90-111 22-43 (49)
246 cd07097 ALDH_KGSADH-YcbD Bacil 41.4 1.6E+02 0.0035 25.1 7.6 57 13-69 136-199 (473)
247 TIGR01734 D-ala-DACP-lig D-ala 41.3 1.2E+02 0.0027 25.5 7.0 61 8-70 45-106 (502)
248 PRK13390 acyl-CoA synthetase; 41.3 1.3E+02 0.0028 25.5 7.1 60 8-69 44-104 (501)
249 PRK11905 bifunctional proline 41.0 2.6E+02 0.0057 27.4 9.3 79 11-97 675-764 (1208)
250 cd07085 ALDH_F6_MMSDH Methylma 40.3 2.3E+02 0.0051 24.2 8.3 66 13-78 137-212 (478)
251 TIGR01237 D1pyr5carbox2 delta- 39.5 1.9E+02 0.0042 25.0 7.8 59 11-69 166-231 (511)
252 PRK08180 feruloyl-CoA synthase 39.4 1.3E+02 0.0028 26.5 6.9 60 8-69 89-154 (614)
253 PLN02278 succinic semialdehyde 39.1 2.1E+02 0.0045 24.7 7.9 58 11-68 159-223 (498)
254 PRK08308 acyl-CoA synthetase; 38.9 1.8E+02 0.004 23.9 7.5 60 8-69 27-87 (414)
255 TIGR03205 pimA dicarboxylate-- 38.7 1.6E+02 0.0034 25.4 7.2 60 8-69 66-126 (541)
256 COG1012 PutA NAD-dependent ald 38.6 1.6E+02 0.0035 25.2 7.1 37 11-47 132-169 (472)
257 PF10411 DsbC_N: Disulfide bon 37.9 36 0.00078 19.4 2.2 17 196-212 33-49 (57)
258 PRK09029 O-succinylbenzoic aci 37.7 1.9E+02 0.004 24.2 7.4 60 8-69 48-108 (458)
259 PRK13509 transcriptional repre 37.7 1.2E+02 0.0025 23.5 5.6 84 34-125 89-178 (251)
260 cd07092 ALDH_ABALDH-YdcW Esche 37.0 2.6E+02 0.0056 23.6 8.4 48 12-59 118-170 (450)
261 cd07089 ALDH_CddD-AldA-like Rh 37.0 2.1E+02 0.0045 24.3 7.5 49 12-60 123-176 (459)
262 PRK04813 D-alanine--poly(phosp 36.7 1.5E+02 0.0033 25.0 6.8 60 8-69 47-107 (503)
263 cd07110 ALDH_F10_BADH Arabidop 36.7 2.1E+02 0.0045 24.3 7.5 49 12-60 120-173 (456)
264 PF05452 Clavanin: Clavanin; 36.7 15 0.00032 21.7 0.4 7 191-197 73-79 (80)
265 TIGR02275 DHB_AMP_lig 2,3-dihy 36.7 1.6E+02 0.0034 25.3 6.9 60 8-69 68-128 (527)
266 PRK08633 2-acyl-glycerophospho 34.7 2.5E+02 0.0055 26.8 8.4 65 10-76 662-727 (1146)
267 cd06533 Glyco_transf_WecG_TagA 34.7 84 0.0018 22.6 4.2 74 38-117 2-76 (171)
268 TIGR01722 MMSDH methylmalonic 34.4 3E+02 0.0064 23.6 8.3 67 12-78 136-212 (477)
269 cd07145 ALDH_LactADH_F420-Bios 34.4 2.3E+02 0.0049 24.0 7.4 48 12-59 123-175 (456)
270 cd07091 ALDH_F1-2_Ald2-like AL 33.9 2.2E+02 0.0048 24.3 7.2 46 14-59 143-193 (476)
271 PF00455 DeoRC: DeoR C termina 33.9 1.7E+02 0.0037 20.7 8.0 86 34-127 15-108 (161)
272 cd07138 ALDH_CddD_SSP0762 Rhod 33.7 2.3E+02 0.0051 24.1 7.3 50 11-60 129-183 (466)
273 cd07102 ALDH_EDX86601 Uncharac 33.6 2.4E+02 0.0052 23.8 7.4 49 12-60 116-169 (452)
274 PRK07445 O-succinylbenzoic aci 33.5 2E+02 0.0043 24.2 6.9 57 11-69 43-100 (452)
275 cd07078 ALDH NAD(P)+ dependent 33.5 2.9E+02 0.0062 23.1 9.1 50 12-61 96-150 (432)
276 TIGR01501 MthylAspMutase methy 33.5 1.6E+02 0.0035 20.3 5.9 94 23-123 13-118 (134)
277 cd07143 ALDH_AldA_AN0554 Asper 33.3 2.6E+02 0.0057 23.9 7.6 49 12-60 144-197 (481)
278 PRK07769 long-chain-fatty-acid 33.1 3.4E+02 0.0075 23.9 8.6 62 10-73 76-141 (631)
279 PRK09490 metH B12-dependent me 32.9 4.7E+02 0.01 25.8 9.5 86 14-103 753-846 (1229)
280 cd07105 ALDH_SaliADH Salicylal 32.9 3E+02 0.0065 23.1 9.7 58 11-68 97-161 (432)
281 PRK07787 acyl-CoA synthetase; 31.8 2.4E+02 0.0051 23.7 7.1 58 10-69 42-100 (471)
282 PRK07868 acyl-CoA synthetase; 31.4 3E+02 0.0064 26.3 8.1 64 8-75 492-555 (994)
283 PRK03137 1-pyrroline-5-carboxy 31.1 3.5E+02 0.0077 23.4 8.6 57 12-68 171-234 (514)
284 TIGR01780 SSADH succinate-semi 31.0 3.3E+02 0.0071 23.1 8.9 49 12-60 117-170 (448)
285 PF11974 MG1: Alpha-2-macroglo 30.6 40 0.00087 21.7 1.8 23 143-165 23-45 (97)
286 cd07142 ALDH_F2BC Arabidosis a 30.5 2.7E+02 0.0058 23.8 7.2 49 12-60 141-194 (476)
287 TIGR02082 metH 5-methyltetrahy 30.5 5.3E+02 0.012 25.3 9.7 90 13-106 733-830 (1178)
288 cd07112 ALDH_GABALDH-PuuC Esch 30.4 2.9E+02 0.0062 23.5 7.3 48 13-60 125-177 (462)
289 KOG0780 Signal recognition par 30.3 22 0.00048 29.4 0.6 43 87-130 128-171 (483)
290 PLN02419 methylmalonate-semial 29.9 4.1E+02 0.0089 23.8 8.8 68 11-78 248-325 (604)
291 PRK10252 entF enterobactin syn 29.4 2.2E+02 0.0047 27.8 7.1 66 8-75 503-569 (1296)
292 cd07116 ALDH_ACDHII-AcoD Ralst 29.3 3.3E+02 0.0071 23.3 7.5 36 12-47 136-172 (479)
293 TIGR03443 alpha_am_amid L-amin 29.1 2E+02 0.0043 28.4 6.8 59 8-68 290-349 (1389)
294 TIGR03250 PhnAcAld_DH putative 29.1 3.2E+02 0.0069 23.4 7.4 55 14-68 141-202 (472)
295 cd07083 ALDH_P5CDH ALDH subfam 28.7 3.8E+02 0.0083 23.1 8.1 50 11-60 153-207 (500)
296 PF03744 BioW: 6-carboxyhexano 28.6 1.1E+02 0.0025 23.5 4.1 43 165-215 171-223 (239)
297 cd07114 ALDH_DhaS Uncharacteri 28.6 3.7E+02 0.0079 22.8 9.0 57 12-68 119-182 (457)
298 TIGR03216 OH_muco_semi_DH 2-hy 28.4 3.2E+02 0.0069 23.4 7.3 57 12-68 139-202 (481)
299 PRK08043 bifunctional acyl-[ac 28.2 2.5E+02 0.0055 25.3 7.0 61 10-72 252-313 (718)
300 cd07147 ALDH_F21_RNP123 Aldehy 28.2 3E+02 0.0064 23.3 7.1 57 12-68 123-186 (452)
301 cd07113 ALDH_PADH_NahF Escheri 28.0 3.5E+02 0.0076 23.1 7.5 58 12-69 142-206 (477)
302 PRK06145 acyl-CoA synthetase; 27.8 3.1E+02 0.0067 23.1 7.2 61 8-70 47-108 (497)
303 cd07111 ALDH_F16 Aldehyde dehy 27.5 4E+02 0.0086 22.9 8.0 50 11-60 146-200 (480)
304 PRK13252 betaine aldehyde dehy 27.5 3.9E+02 0.0084 22.9 7.7 49 12-60 142-195 (488)
305 KOG2863 RNA lariat debranching 26.9 95 0.0021 25.5 3.5 44 171-225 78-121 (456)
306 COG2875 CobM Precorrin-4 methy 26.7 62 0.0013 24.8 2.4 33 88-123 28-60 (254)
307 cd07139 ALDH_AldA-Rv0768 Mycob 26.6 4E+02 0.0087 22.7 8.3 49 12-60 137-190 (471)
308 cd07123 ALDH_F4-17_P5CDH Delta 26.3 3.9E+02 0.0083 23.3 7.5 47 14-60 172-222 (522)
309 PRK04306 50S ribosomal protein 26.2 79 0.0017 20.5 2.5 31 193-223 35-72 (98)
310 COG1021 EntE Peptide arylation 26.2 4.1E+02 0.0089 22.6 9.0 92 6-102 71-167 (542)
311 cd07119 ALDH_BADH-GbsA Bacillu 26.0 4.2E+02 0.0091 22.7 9.1 57 13-69 135-198 (482)
312 PRK11903 aldehyde dehydrogenas 25.7 3.6E+02 0.0078 23.5 7.1 35 13-47 149-184 (521)
313 PF14617 CMS1: U3-containing 9 25.7 2.2E+02 0.0048 22.1 5.3 49 49-100 165-213 (252)
314 cd07150 ALDH_VaniDH_like Pseud 25.6 4.1E+02 0.0089 22.4 8.4 57 12-68 119-182 (451)
315 cd07118 ALDH_SNDH Gluconobacte 25.3 4.2E+02 0.0092 22.5 9.0 50 11-60 118-172 (454)
316 PRK07638 acyl-CoA synthetase; 25.2 3.7E+02 0.0079 22.6 7.2 56 12-69 49-105 (487)
317 PRK13805 bifunctional acetalde 25.0 3.8E+02 0.0082 25.1 7.5 67 12-78 108-189 (862)
318 cd07094 ALDH_F21_LactADH-like 24.7 4.3E+02 0.0093 22.3 10.2 57 12-68 123-186 (453)
319 cd07107 ALDH_PhdK-like Nocardi 24.7 4.3E+02 0.0094 22.4 7.9 36 12-47 116-152 (456)
320 cd07122 ALDH_F20_ACDH Coenzyme 24.6 4.4E+02 0.0095 22.4 7.4 36 12-47 95-131 (436)
321 PRK09407 gabD2 succinic semial 24.6 2.9E+02 0.0063 24.0 6.4 58 12-69 154-218 (524)
322 PF07210 DUF1416: Protein of u 24.6 1.9E+02 0.0041 18.2 4.7 18 143-161 16-33 (85)
323 COG4126 Hydantoin racemase [Am 24.5 2.5E+02 0.0054 21.4 5.1 87 31-119 101-203 (230)
324 PRK13473 gamma-aminobutyraldeh 24.0 4.6E+02 0.0099 22.4 8.0 35 13-47 139-174 (475)
325 TIGR02518 EutH_ACDH acetaldehy 23.8 4.8E+02 0.01 22.5 8.2 36 12-47 104-140 (488)
326 cd07100 ALDH_SSADH1_GabD1 Myco 23.7 4.4E+02 0.0096 22.1 9.2 49 11-59 95-148 (429)
327 TIGR03089 conserved hypothetic 23.2 1.7E+02 0.0037 22.0 4.3 37 8-46 48-84 (227)
328 cd07149 ALDH_y4uC Uncharacteri 22.9 4.6E+02 0.01 22.1 10.2 58 12-69 123-187 (453)
329 KOG2451 Aldehyde dehydrogenase 22.9 4.6E+02 0.01 22.0 7.7 34 14-47 161-195 (503)
330 cd06534 ALDH-SF NAD(P)+-depend 22.9 4.2E+02 0.0091 21.5 10.2 50 12-61 92-146 (367)
331 PF02310 B12-binding: B12 bind 22.4 2.3E+02 0.005 18.4 7.1 46 22-68 11-58 (121)
332 KOG1256 Long-chain acyl-CoA sy 22.4 6E+02 0.013 23.2 9.6 84 32-120 150-235 (691)
333 cd07088 ALDH_LactADH-AldA Esch 22.3 4.9E+02 0.011 22.1 9.1 49 12-60 133-186 (468)
334 PF06183 DinI: DinI-like famil 22.2 47 0.001 19.7 0.8 25 99-123 9-33 (65)
335 PRK11241 gabD succinate-semial 22.1 2.8E+02 0.0061 23.8 5.8 48 12-59 146-198 (482)
336 TIGR02299 HpaE 5-carboxymethyl 22.0 4E+02 0.0086 22.9 6.7 49 12-60 135-188 (488)
337 TIGR01236 D1pyr5carbox1 delta- 21.9 4.7E+02 0.01 22.9 7.2 56 14-69 172-233 (533)
338 cd07126 ALDH_F12_P5CDH Delta(1 21.9 5.3E+02 0.011 22.3 8.0 49 11-59 141-194 (489)
339 PRK06814 acylglycerophosphoeth 21.8 5.5E+02 0.012 24.7 8.2 62 9-72 678-740 (1140)
340 cd07559 ALDH_ACDHII_AcoD-like 21.8 5.2E+02 0.011 22.2 7.7 49 11-59 135-188 (480)
341 PRK11563 bifunctional aldehyde 21.7 5.4E+02 0.012 23.3 7.7 57 14-70 150-214 (675)
342 cd07128 ALDH_MaoC-N N-terminal 21.5 5.1E+02 0.011 22.6 7.3 57 13-69 145-209 (513)
343 PRK11121 nrdG anaerobic ribonu 21.3 1.7E+02 0.0038 20.5 3.8 11 91-101 69-79 (154)
344 PF05748 Rubella_E1: Rubella m 21.2 3E+02 0.0065 21.5 5.1 77 100-176 215-293 (496)
345 cd07148 ALDH_RL0313 Uncharacte 21.1 5.2E+02 0.011 21.9 8.0 49 12-60 124-177 (455)
346 COG2351 Transthyretin-like pro 21.0 78 0.0017 21.3 1.7 19 142-160 18-36 (124)
347 cd07095 ALDH_SGSD_AstD N-succi 20.5 5.2E+02 0.011 21.8 8.3 49 11-59 96-149 (431)
348 PF12503 CMV_1a_C: Cucumber mo 20.4 1.3E+02 0.0029 18.7 2.5 9 186-194 34-42 (85)
349 PRK09457 astD succinylglutamic 20.1 5.6E+02 0.012 22.0 8.3 57 12-68 134-197 (487)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.6e-43 Score=288.96 Aligned_cols=218 Identities=50% Similarity=0.836 Sum_probs=199.1
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~ 87 (228)
...+..|+.++.+|++|.+|+...+.+.+..|++++..+.+++..+++.+++|++|+++++|+++..|++.+...+.+++
T Consensus 220 ~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~ 299 (537)
T KOG1176|consen 220 WELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLS 299 (537)
T ss_pred ccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCC
Confidence 56667899999999999999999666677777788888889999999999999999999999999999998877778999
Q ss_pred CceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCC
Q 027096 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (228)
Q Consensus 88 ~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g 167 (228)
++|.+.++|+++++++.+++++.+|+..+.+.||+||+++..+.+..... ...+++|+++++++.++.+ ++|+.++++
T Consensus 300 sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~ 377 (537)
T KOG1176|consen 300 SLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPN 377 (537)
T ss_pred ccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc-CcccccCccccceEEEeeC-CCCCCCCCC
Confidence 99999999999999999999999988999999999999987776655543 6789999999999988888 999999999
Q ss_pred CceEEEEecCcccc-------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 168 QLGEIWLRGPNMMR-------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 168 ~~Gel~v~~~~~~~-------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.||||+||+.++. ++.+.++++|||+|||+|++|+||++++++|++|+||.+|.+|+|.
T Consensus 378 ~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~ 444 (537)
T KOG1176|consen 378 QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPA 444 (537)
T ss_pred CceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHH
Confidence 99999999999997 5666777779999999999999999999999999999999999984
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=9.1e-41 Score=262.84 Aligned_cols=223 Identities=29% Similarity=0.402 Sum_probs=201.7
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~ 82 (228)
....++++..+++++..|++|.+|.....+++|..|+++|++ +.+++...++.|+++++|+++.+|+++..+++.++..
T Consensus 266 vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~ 345 (596)
T KOG1177|consen 266 VGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQ 345 (596)
T ss_pred HHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhc
Confidence 345688999999999999999999888899999999999996 5799999999999999999999999999999999889
Q ss_pred CCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeecc-CCCCCCCCCCccccCCCceEEEEeCCCC
Q 027096 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMEN-SFAGSRNIGSAGALAPGVEALIVSVDTQ 161 (228)
Q Consensus 83 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~-~~~~~~~~~~~g~p~~~~~~~i~d~~~~ 161 (228)
..+++++|..+.+|+++|+++.+.+.+...-..+...||+||+++...... .+.......++|..+++.+..++| +.|
T Consensus 346 ~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g 424 (596)
T KOG1177|consen 346 QVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDG 424 (596)
T ss_pred cCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCC
Confidence 999999999999999999999999999764445889999999998776543 333355667899999999999999 999
Q ss_pred CCCCCCCceEEEEecCcccc-------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 162 KPLPPNQLGEIWLRGPNMMR-------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 162 ~~~~~g~~Gel~v~~~~~~~-------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
..++.|..|||++||++.|. .+.+..+.|.||+|||++.+|++|.++++||++|+|+.+|++|+|.
T Consensus 425 ~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ 497 (596)
T KOG1177|consen 425 SEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPT 497 (596)
T ss_pred CccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChH
Confidence 99999999999999998876 4667777889999999999999999999999999999999999984
No 3
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.7e-39 Score=273.76 Aligned_cols=221 Identities=25% Similarity=0.404 Sum_probs=192.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..++++++|++++++|++|.+++...++.++..|+++++.+ .+++..+++.|+++++|+++++|++++.+++.......
T Consensus 217 ~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 296 (539)
T PRK06334 217 KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQES 296 (539)
T ss_pred HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhccc
Confidence 45678899999999999999999876788999999998875 57999999999999999999999999999887655556
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
.++++|.+++||+++++++.+++++.+++..+++.||+||++.++....... .....++|+|+++++++++|.++++++
T Consensus 297 ~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~vG~p~~g~~v~i~d~~~~~~~ 375 (539)
T PRK06334 297 CLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNS-PKHESCVGMPIRGMDVLIVSEETKVPV 375 (539)
T ss_pred ccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCC-CCCCCcCceecCCCEEEEEcCCCCccC
Confidence 7889999999999999999999999998899999999999987766543222 223467999999999999996778999
Q ss_pred CCCCceEEEEecCccccccccc--------ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKLT--------IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~~--------~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+|+|+.++..+... .+.++||+|||+|++|++|.+++.||.||+||++|.+|+|.
T Consensus 376 ~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~ 446 (539)
T PRK06334 376 SSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLE 446 (539)
T ss_pred CCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHH
Confidence 9999999999999988733221 12467999999999999999999999999999999999984
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-39 Score=274.01 Aligned_cols=221 Identities=42% Similarity=0.634 Sum_probs=191.9
Q ss_pred cccc--CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 6 QETA--GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 6 ~~~~--~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
+.++ +++.|++++++|++|.+|+...++.+++.|+++++.+ .+++..++..+.++++|+++++|+++..++.++..
T Consensus 205 ~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~ 284 (534)
T COG0318 205 AALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEK 284 (534)
T ss_pred HHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCcc
Confidence 4455 8899999999999999999997777899999999987 59999999999999999999999999999998877
Q ss_pred CCCCCCC-ceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCC
Q 027096 82 KKFDLSS-LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT 160 (228)
Q Consensus 82 ~~~~~~~-lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~ 160 (228)
.+..+.+ +|.++.||+++++++.+++++.|+...+.+.||+||+++.++...........+.+|.|+++++++|+|.++
T Consensus 285 ~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~ 364 (534)
T COG0318 285 DDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDG 364 (534)
T ss_pred CccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCC
Confidence 7666665 999999999999999999999996678999999999998776654433113456679999999999999666
Q ss_pred CCCCCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 161 QKPLPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 161 ~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++.+ |+.|||+|+||.++..+ ...+..+|||+|||+|++|++|.++|.||.+|+|+++|+||+|+
T Consensus 365 ~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~ 437 (534)
T COG0318 365 GEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPE 437 (534)
T ss_pred CccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHH
Confidence 65666 99999999999999833 23343359999999999999999999999999999999999985
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=7.1e-39 Score=263.91 Aligned_cols=215 Identities=28% Similarity=0.334 Sum_probs=185.8
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--C-CHHHHHHHHHhcCceEEEechHHHHHHHhcCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F-DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~ 82 (228)
..+++.++|++++..++.|+.|....++.+|.+|++.++.++ + +++.+++.++++++|.+++.|+.++.|.+....+
T Consensus 206 ~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~ 285 (528)
T COG0365 206 FHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGE 285 (528)
T ss_pred HhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcc
Confidence 457888999999999999999999999999999999999864 2 3999999999999999999999999999887666
Q ss_pred CCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCC
Q 027096 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 162 (228)
Q Consensus 83 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 162 (228)
+.++++||.+.++|||++++.++++.+.+ ++++.+.||+||++.+...... .. ..+..|.|+||+++.++| ++|+
T Consensus 286 ~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~--~~-~~g~~g~p~pG~~~~vvd-d~g~ 360 (528)
T COG0365 286 PYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP--PV-KNGSSGLPLPGYAVRRVD-DEGN 360 (528)
T ss_pred cccchhheeeeccCCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC--Cc-CCCCCCCCCCCceeEEEC-CCCC
Confidence 78899999999999999999999999999 6999999999999955544333 12 334449999999999999 5599
Q ss_pred CCCCCCceEEEEecCcccc---------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 163 PLPPNQLGEIWLRGPNMMR---------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 163 ~~~~g~~Gel~v~~~~~~~---------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++.|+ |+|+++.+.... .+.+.+ -+.||.|||.+++|+||+++++||.||+||+.|++|+|.
T Consensus 361 ~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y-~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~ 432 (528)
T COG0365 361 PVPPGV-GELVVRLPWPGMALTYWNDPERYKEAY-FGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPL 432 (528)
T ss_pred cCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHH-hhceeecCceeEEccCCCEEEEeeccceEeccCeeccHH
Confidence 999999 999999986532 122222 123999999999999999999999999999999999873
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.4e-37 Score=263.18 Aligned_cols=217 Identities=43% Similarity=0.789 Sum_probs=188.9
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC-CCCCCCCc
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-KKFDLSSL 89 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~~~l 89 (228)
..++++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|+++++|++++.+.+.... ....++++
T Consensus 242 ~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l 321 (560)
T PLN02574 242 GSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSL 321 (560)
T ss_pred CCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccc
Confidence 35688999999999999987777888999999999889999999999999999999999999999886543 34567899
Q ss_pred eEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCc
Q 027096 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQL 169 (228)
Q Consensus 90 r~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~ 169 (228)
|.++++|+++++++.+++.+.+++..+++.||+||++.+..............++|.|.++++++|+|++++++++.|+.
T Consensus 322 r~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~ 401 (560)
T PLN02574 322 KQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC 401 (560)
T ss_pred eEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC
Confidence 99999999999999999999998899999999999987654322222223457899999999999999888999999999
Q ss_pred eEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 170 GEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 170 Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|||+|+|+.++.. +...+..+|||+|||+|+++++|.+++.||.||+||++|++|+|.
T Consensus 402 Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~ 466 (560)
T PLN02574 402 GELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPA 466 (560)
T ss_pred eEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHH
Confidence 9999999988863 233455689999999999999999999999999999999999985
No 7
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-37 Score=262.62 Aligned_cols=218 Identities=26% Similarity=0.351 Sum_probs=188.6
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KK 83 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~ 83 (228)
..+++.++|++++.+|++|.+|+.. ++.++..|+++++.+.+++..+++.++++++|+++++|++++.+++.... ..
T Consensus 241 ~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 319 (549)
T PRK07788 241 SRVPFRAGETTLLPAPMFHATGWAH-LTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAK 319 (549)
T ss_pred hhCCCCcCCeEEEccchHHHHHHHH-HHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCC
Confidence 4567888999999999999999976 67889999999999889999999999999999999999999999887544 44
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
..++++|.+++||+++++++.+++++.+ +..+++.||+||++..+...... .....+++|+|+++++++++| +++++
T Consensus 320 ~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d-~~~~~ 396 (549)
T PRK07788 320 YDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGSTEVAFATIATPED-LAEAPGTVGRPPKGVTVKILD-ENGNE 396 (549)
T ss_pred CCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcchhchhhccChhh-hhhcCCCcccCCCCcEEEEEC-CCcCC
Confidence 5678999999999999999999999988 57899999999998655443221 123457899999999999999 78899
Q ss_pred CCCCCceEEEEecCccccccccc---ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRATKLT---IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~~~~---~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++|+.++..+... ...+|||+|||+++++++|.+++.||.||+||++|++|+|.
T Consensus 397 ~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~ 463 (549)
T PRK07788 397 VPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPA 463 (549)
T ss_pred CCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHH
Confidence 99999999999999887643221 22468999999999999999999999999999999999984
No 8
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=9.9e-38 Score=256.57 Aligned_cols=207 Identities=39% Similarity=0.600 Sum_probs=175.4
Q ss_pred cEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCC---HHHHHHHHHhcCceEEEechHHHHHHHhcCCCC----CCCC
Q 027096 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK----KFDL 86 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~~ 86 (228)
|++++.+|++|.+|+...++.+++.|+++++.+... ++.+++.++++++|++.++|++++.+++..+.. ...+
T Consensus 197 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l 276 (417)
T PF00501_consen 197 DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDL 276 (417)
T ss_dssp TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTG
T ss_pred ceEEeeccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccccccccc
Confidence 699999999999999666999999999999998654 467899999999999999999999998843222 3467
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCC
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 166 (228)
+++|.++++|+++++++.+++++.++.+++++.||+||++.++............+++|.|+++++++|+|++++++++.
T Consensus 277 ~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~ 356 (417)
T PF00501_consen 277 SSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPP 356 (417)
T ss_dssp TT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBEST
T ss_pred ccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccccccccccccccccccccccccccc
Confidence 88999999999999999999999996669999999999999987553222234567899999999999999777999999
Q ss_pred CCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeec
Q 027096 167 NQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYK 220 (228)
Q Consensus 167 g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~ 220 (228)
|+.|||+++|+.++..+ ...+..+|||+|||+|++|++|.++++||.||+||++
T Consensus 357 g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 357 GEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred cccccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999988733 2345445799999999999999999999999999974
No 9
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.7e-36 Score=256.82 Aligned_cols=222 Identities=46% Similarity=0.768 Sum_probs=193.8
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
+.++++++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........
T Consensus 217 ~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 296 (537)
T PLN02246 217 PNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYD 296 (537)
T ss_pred cccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccC
Confidence 35678999999999999999998877888999999999999899999999999999999999999999998876555566
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccC---CCCCCCCCCccccCCCceEEEEeCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENS---FAGSRNIGSAGALAPGVEALIVSVDTQK 162 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~---~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 162 (228)
++++|.++++|+++++++.+.+++.+++..+++.||+||++.+++.+.. .......+.+|+|+++++++++|+++++
T Consensus 297 ~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 376 (537)
T PLN02246 297 LSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGA 376 (537)
T ss_pred ccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCC
Confidence 7899999999999999999999999988999999999999876544321 1112234678999999999999977899
Q ss_pred CCCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 163 PLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 163 ~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++.|+.|||+++|+.++.. +...++.++||+|||+++++++|.++++||.||+||.+|.+|+|.
T Consensus 377 ~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~ 448 (537)
T PLN02246 377 SLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPA 448 (537)
T ss_pred cCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcH
Confidence 99999999999999988763 233445678999999999999999999999999999999999984
No 10
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.8e-36 Score=260.92 Aligned_cols=219 Identities=29% Similarity=0.505 Sum_probs=185.7
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--C-C---HHHHHHHHHhcCceEEEechHHHHHHHhcC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F-D---LEMFLRAIEKHRVTHIWVVPPLILALAKHG 79 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~-~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~ 79 (228)
+.++++++|++++.+|++|..++...++.++..|+++++.+. + + ...+++.++++++|++.++|+++..+++.+
T Consensus 247 ~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 326 (632)
T PRK07529 247 LLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVP 326 (632)
T ss_pred HhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc
Confidence 456778999999999999999998878999999999999753 2 1 367889999999999999999999998765
Q ss_pred CCCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC-
Q 027096 80 LVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV- 158 (228)
Q Consensus 80 ~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~- 158 (228)
. ...+++++|.+++||+++++++.+++++.+ +.++++.||+||+++++...... .....+++|.|+++++++++..
T Consensus 327 ~-~~~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d 403 (632)
T PRK07529 327 V-DGHDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILD 403 (632)
T ss_pred c-cCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCcc-ccccCCCcccccCCceEEEEEcC
Confidence 3 234678999999999999999999999988 79999999999998876554332 2335678999999999998632
Q ss_pred CCC---CCCCCCCceEEEEecCcccccc------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 159 DTQ---KPLPPNQLGEIWLRGPNMMRAT------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 159 ~~~---~~~~~g~~Gel~v~~~~~~~~~------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++ ++++.|+.|||+|+|+.++..+ ...+..++||+|||+|++++||.+++.||.||+||++|++|+|+
T Consensus 404 ~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~ 481 (632)
T PRK07529 404 DAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPA 481 (632)
T ss_pred CCCcccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHH
Confidence 445 7899999999999999988733 22233578999999999999999999999999999999999985
No 11
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.1e-36 Score=263.25 Aligned_cols=222 Identities=21% Similarity=0.287 Sum_probs=186.6
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
...++++++|++++.+|++|+.+....++.+|+.|+++++.++ +++..+++.|+++++|+++.+|++++.|.+...
T Consensus 309 ~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 388 (666)
T PLN02654 309 KYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGD 388 (666)
T ss_pred HHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCc
Confidence 3457899999999999999999987778899999999999864 479999999999999999999999999987643
Q ss_pred --CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCC--CeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEE
Q 027096 81 --VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIV 156 (228)
Q Consensus 81 --~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~--~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 156 (228)
....++++||.++++|+++++++.+++.+.++. .++.+.||+||+++.............++++|.|+++++++|+
T Consensus 389 ~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~ 468 (666)
T PLN02654 389 EYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 468 (666)
T ss_pred cccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEE
Confidence 234567899999999999999999999998853 6899999999998765543221112356789999999999999
Q ss_pred eCCCCCCCCCCCceEEEEecC--ccccc-------ccccc--cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 157 SVDTQKPLPPNQLGEIWLRGP--NMMRA-------TKLTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 157 d~~~~~~~~~g~~Gel~v~~~--~~~~~-------~~~~~--~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
| ++|++++.++.|||+++++ .++.. +...+ ..+|||+|||++++|+||.++++||+||+||++|++|+
T Consensus 469 d-~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~ 547 (666)
T PLN02654 469 D-EKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIG 547 (666)
T ss_pred C-CCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEEC
Confidence 9 7889999888999999994 44431 11111 13689999999999999999999999999999999999
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
|.
T Consensus 548 p~ 549 (666)
T PLN02654 548 TA 549 (666)
T ss_pred HH
Confidence 84
No 12
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=3.4e-36 Score=255.46 Aligned_cols=220 Identities=24% Similarity=0.346 Sum_probs=191.6
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|..++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+..........
T Consensus 231 ~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~ 310 (547)
T PRK13295 231 ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRP 310 (547)
T ss_pred HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCC
Confidence 45678899999999999999998877899999999999998899999999999999999999999999998876656667
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+++++++.+++++.+ ++++++.||+||++.+...............+|+|+++++++++| +++++++
T Consensus 311 ~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~ 388 (547)
T PRK13295 311 VSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLP 388 (547)
T ss_pred cccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCC
Confidence 88999999999999999999999988 799999999999987665443222223346789999999999999 7789999
Q ss_pred CCCceEEEEecCccccccccc-----ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATKLT-----IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~~~-----~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+|+++.++..+... ...+|||+|||+++++++|.+++.||.||+||.+|.+|+|.
T Consensus 389 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~ 455 (547)
T PRK13295 389 AGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVV 455 (547)
T ss_pred CCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHH
Confidence 999999999999887633221 12468999999999999999999999999999999999984
No 13
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.4e-36 Score=257.17 Aligned_cols=215 Identities=29% Similarity=0.456 Sum_probs=182.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KK 83 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~ 83 (228)
..++++++|+++..+|++|..++.. ++.++..|+++++.+.+++..+++.++++++|+++++|+++..+++.... ..
T Consensus 206 ~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 284 (563)
T PLN02860 206 AIVGYGEDDVYLHTAPLCHIGGLSS-ALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTW 284 (563)
T ss_pred hhcCCCCCCEEEEecCchhhccHHH-HHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhcc
Confidence 4578899999999999999999876 78999999999999999999999999999999999999999999875432 22
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC---------------------CCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---------------------GSRNIG 142 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~---------------------~~~~~~ 142 (228)
..++++|.+++||+++++++.+++++.|++.++++.||+||++..+....... ......
T Consensus 285 ~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (563)
T PLN02860 285 KVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGV 364 (563)
T ss_pred ccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCc
Confidence 45789999999999999999999999998899999999999986543321110 011123
Q ss_pred CccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCC
Q 027096 143 SAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 215 (228)
Q Consensus 143 ~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d 215 (228)
++|+|++++++++++.+ +|+.|||+++|+.++..+ ...+..+|||+|||+|+++++|.+++.||.||
T Consensus 365 ~vG~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d 438 (563)
T PLN02860 365 CVGKPAPHVELKIGLDE------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSND 438 (563)
T ss_pred ccCCccCCcEEEEecCC------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccc
Confidence 68999999999999843 578899999999988633 33444689999999999999999999999999
Q ss_pred ceeecCeEeecC
Q 027096 216 LIKYKGFQVTSN 227 (228)
Q Consensus 216 ~i~~~G~~v~p~ 227 (228)
+||++|++|+|.
T Consensus 439 ~i~~~G~~v~p~ 450 (563)
T PLN02860 439 RIKTGGENVYPE 450 (563)
T ss_pred eeEECCEEccHH
Confidence 999999999984
No 14
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-36 Score=251.15 Aligned_cols=218 Identities=32% Similarity=0.470 Sum_probs=190.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|++++.+++........
T Consensus 183 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 262 (496)
T PRK06839 183 FAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTN 262 (496)
T ss_pred HHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCC
Confidence 34578899999999999999998877788999999999988899999999999999999999999999999877666677
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+++++++.+.+++. +.++.+.||+||++.++............+++|+|+++++++++| +++++++
T Consensus 263 ~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~ 339 (496)
T PRK06839 263 LQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELID-ENKNKVE 339 (496)
T ss_pred CcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEEC-CCcCCCC
Confidence 8899999999999999999999886 789999999999997654443332234567899999999999999 6777799
Q ss_pred CCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+|+++.++..+ ...+ .+|||+|||+++++++|.+++.||.||+||.+|.+|+|+
T Consensus 340 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 407 (496)
T PRK06839 340 VGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPL 407 (496)
T ss_pred CCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHH
Confidence 999999999999887622 2222 478999999999999999999999999999999999985
No 15
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-36 Score=262.37 Aligned_cols=214 Identities=28% Similarity=0.452 Sum_probs=174.0
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC-------
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV------- 81 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~------- 81 (228)
+++++|++++.+|++|+++... .+.+++.|+++++.+ .++..+++.++++++|+++++|++++.+.+....
T Consensus 265 ~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~ 342 (666)
T PLN02614 265 ALTVKDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGF 342 (666)
T ss_pred CCCCCcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCH
Confidence 5788999999999999999865 567788999998875 5899999999999999999999999887642100
Q ss_pred --------------------------CC-----------CCC-CCceEEEEcccCCCHHHHHHHHHhCCCCeEEeccccc
Q 027096 82 --------------------------KK-----------FDL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLT 123 (228)
Q Consensus 82 --------------------------~~-----------~~~-~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~t 123 (228)
.+ ..+ .++|.+++||+++++++ +++.+.+++.++++.||+|
T Consensus 343 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~T 421 (666)
T PLN02614 343 LKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLT 421 (666)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchH
Confidence 00 001 58999999999999875 5666767678999999999
Q ss_pred ccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCC--CCCCCCCCceEEEEecCccccc-------ccccccCCCeEE
Q 027096 124 ETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT--QKPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVH 194 (228)
Q Consensus 124 E~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~--~~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~ 194 (228)
|++......... .....+++|+|+|+++++|+|.++ +++++.|+.|||+|+||.++.. +.+.+ .+|||+
T Consensus 422 E~~~~~~~~~~~-~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~ 499 (666)
T PLN02614 422 ESCAGTFVSLPD-ELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLH 499 (666)
T ss_pred hhhhheeeeccc-cCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcc
Confidence 987654433222 123457899999999999998433 4788999999999999999873 34455 479999
Q ss_pred cCceEEEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 195 TGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 195 TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
|||+|++|+||.++|.||.||+||+ +|++|+|+
T Consensus 500 TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~ 533 (666)
T PLN02614 500 TGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVE 533 (666)
T ss_pred cceEEEEcCCCCEEEEEcchhceecCCCeeecHH
Confidence 9999999999999999999999996 79999985
No 16
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1e-35 Score=252.04 Aligned_cols=220 Identities=21% Similarity=0.276 Sum_probs=189.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|..++...++.++..|+++++.+.+++..+++.+++++++++.++|+++..+..........
T Consensus 229 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~ 308 (538)
T TIGR03208 229 ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAP 308 (538)
T ss_pred hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCC
Confidence 45678899999999999999998777899999999999998899999999999999999999999999888765444456
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+++++++.+++.+.+ +.++++.||+||++.+...............+|+|+++++++++| +++++++
T Consensus 309 ~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~ 386 (538)
T TIGR03208 309 VPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLS 386 (538)
T ss_pred CCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCc
Confidence 78999999999999999999999988 689999999999988765443222122235789999999999999 7889999
Q ss_pred CCCceEEEEecCcccccccc-----cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATKL-----TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~~-----~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++++.++..+.. ..+.++||+|||+++++++|.++++||.||+||.+|.+|+|.
T Consensus 387 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~ 453 (538)
T TIGR03208 387 QGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVV 453 (538)
T ss_pred CCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHH
Confidence 99999999999987753221 223578999999999999999999999999999999999985
No 17
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=5.7e-36 Score=251.45 Aligned_cols=219 Identities=17% Similarity=0.153 Sum_probs=178.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC--CC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VK 82 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~ 82 (228)
..++++++|++++.+|++|..++.. ++.+++.|+++++.+. +++..+++.|+++++|+++++|++++.|++... ..
T Consensus 153 ~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~ 231 (499)
T PLN03051 153 AHMDIQPGDVVCWPTNLGWMMGPWL-LYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAME 231 (499)
T ss_pred HhcCCCCCCEEEEccCcceeeehHH-HHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccc
Confidence 3467889999999999999999864 7889999999998874 788999999999999999999999999887543 33
Q ss_pred CCCCCCceEEEEcccCCCHHHHHHHHHhCC-CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCC
Q 027096 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 161 (228)
Q Consensus 83 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~ 161 (228)
..++++||.++++|+++++++.+++++.++ +..+++.||+||++..+....... ....+++|+|.++++++|+| +++
T Consensus 232 ~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~ivd-~~g 309 (499)
T PLN03051 232 GLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQ-PQAPGAFSTASLGTRFVLLN-DNG 309 (499)
T ss_pred cCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccC-CCCCccccCCCCCceEEEEC-CCC
Confidence 456789999999999999999988777331 378999999999875433222111 22456899999999999999 788
Q ss_pred CCCCCC--CceEEEEecCccc--ccc-----cccc-c--------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeE
Q 027096 162 KPLPPN--QLGEIWLRGPNMM--RAT-----KLTI-D--------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 223 (228)
Q Consensus 162 ~~~~~g--~~Gel~v~~~~~~--~~~-----~~~~-~--------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~ 223 (228)
++++.| +.|||+++|+.++ ..+ ...+ + ..+||+|||+|++|+||.++++||.||+||++|+|
T Consensus 310 ~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~ 389 (499)
T PLN03051 310 VPYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIK 389 (499)
T ss_pred CCCCCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEE
Confidence 999888 4799999999763 211 1111 1 12379999999999999999999999999999999
Q ss_pred eecC
Q 027096 224 VTSN 227 (228)
Q Consensus 224 v~p~ 227 (228)
|+|.
T Consensus 390 v~p~ 393 (499)
T PLN03051 390 TSSV 393 (499)
T ss_pred CCHH
Confidence 9984
No 18
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=7.3e-36 Score=257.06 Aligned_cols=221 Identities=22% Similarity=0.245 Sum_probs=183.6
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC-
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~- 80 (228)
..++++++|++++.+|++|+.++...++.+|+.|+++++.++ +++..+++.++++++|+++++|++++.|.+...
T Consensus 267 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 346 (628)
T TIGR02316 267 AIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA 346 (628)
T ss_pred HhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc
Confidence 457889999999999999999987668899999999999763 478999999999999999999999998877543
Q ss_pred -CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCC-C-CCCCCCCccccCCCceEEEEe
Q 027096 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF-A-GSRNIGSAGALAPGVEALIVS 157 (228)
Q Consensus 81 -~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~-~-~~~~~~~~g~p~~~~~~~i~d 157 (228)
.....+++||.++++|+++++++.+++++.+ +..+++.||+||++..+...... . .....+++|+|+++++++++|
T Consensus 347 ~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d 425 (628)
T TIGR02316 347 WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLD 425 (628)
T ss_pred ccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEE
Confidence 2345688999999999999999999999988 68899999999998644332211 1 123456889999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCc---cccc-------cccc---ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 158 VDTQKPLPPNQLGEIWLRGPN---MMRA-------TKLT---IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 158 ~~~~~~~~~g~~Gel~v~~~~---~~~~-------~~~~---~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
.+++++++.|+.|||++++|. .+.. +... ...++||+|||+|++|+||.++++||+||+||++|++|
T Consensus 426 ~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv 505 (628)
T TIGR02316 426 EATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRL 505 (628)
T ss_pred CCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEe
Confidence 658999999999999999984 2211 1111 11467999999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
+|.
T Consensus 506 ~~~ 508 (628)
T TIGR02316 506 GTR 508 (628)
T ss_pred CHH
Confidence 984
No 19
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1e-35 Score=256.18 Aligned_cols=221 Identities=29% Similarity=0.384 Sum_probs=185.7
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
..++++++|++++.+|++|+.+....++.+|.+|+++++.+. +++..+++.++++++|+++++|++++.|.+....
T Consensus 271 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 350 (625)
T TIGR02188 271 YVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDE 350 (625)
T ss_pred hccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc
Confidence 457889999999999999999876668899999999999753 4799999999999999999999999999876432
Q ss_pred --CCCCCCCceEEEEcccCCCHHHHHHHHHhCC--CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEe
Q 027096 82 --KKFDLSSLKLVGSGAAPLGKELMEECAKNVP--SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 157 (228)
Q Consensus 82 --~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~--~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d 157 (228)
....+++||.++++|+++++++.+++.+.++ ++++++.||+||+++.+............+.+|+|+++++++++|
T Consensus 351 ~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d 430 (625)
T TIGR02188 351 WVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD 430 (625)
T ss_pred ccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC
Confidence 2356789999999999999999999999884 378999999999988765433221223567899999999999999
Q ss_pred CCCCCCCC-CCCceEEEEecC--ccccc-------ccccc--cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 158 VDTQKPLP-PNQLGEIWLRGP--NMMRA-------TKLTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 158 ~~~~~~~~-~g~~Gel~v~~~--~~~~~-------~~~~~--~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
+++++++ .|+.|||++++| .++.. +...+ ..+|||+|||++++|++|.++++||+||+||++|++|+
T Consensus 431 -~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~ 509 (625)
T TIGR02188 431 -EEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLG 509 (625)
T ss_pred -CCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEEC
Confidence 8899999 899999999995 44431 11111 13689999999999999999999999999999999999
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
|.
T Consensus 510 p~ 511 (625)
T TIGR02188 510 TA 511 (625)
T ss_pred HH
Confidence 84
No 20
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-35 Score=250.50 Aligned_cols=222 Identities=35% Similarity=0.565 Sum_probs=194.4
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++++++|++++.+|++|.+++...++.++..|+++++.+..++..+++.++++++|+++++|++++.+.+.......
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~ 278 (513)
T PRK07656 199 AEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAE 278 (513)
T ss_pred HHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCC
Confidence 35678899999999999999999988789999999999998888999999999999999999999999999988766666
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC-CCCCCCccccCCCceEEEEeCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~-~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.++++|.++++|+++++++.+++++.++...+++.||+||++++...+..... .....++|.|+++++++++| +++++
T Consensus 279 ~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~ 357 (513)
T PRK07656 279 DLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEE 357 (513)
T ss_pred CccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCC
Confidence 78899999999999999999999999854489999999999887766543321 12257899999999999999 77899
Q ss_pred CCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++++.++.. +...+..++||+|||+++++++|.++++||.||+||++|.+|+|.
T Consensus 358 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~ 428 (513)
T PRK07656 358 VPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPA 428 (513)
T ss_pred CCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHH
Confidence 9999999999999987652 223333478999999999999999999999999999999999874
No 21
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-36 Score=260.38 Aligned_cols=212 Identities=23% Similarity=0.348 Sum_probs=177.0
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhc--------CCCC
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKH--------GLVK 82 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~--------~~~~ 82 (228)
.+.|++++.+|++|++++.. .+.+++.|+++++.+. ++..+++.|+++++|+++++|.+++.+.+. +...
T Consensus 345 ~~~d~~ls~LPL~Hi~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~ 422 (746)
T PTZ00342 345 YNPKTHLSYLPISHIYERVI-AYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLK 422 (746)
T ss_pred CCCCeEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHH
Confidence 35689999999999999976 6778999999998765 899999999999999999999999988652 1000
Q ss_pred C----------------------------------CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCc
Q 027096 83 K----------------------------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGI 128 (228)
Q Consensus 83 ~----------------------------------~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~ 128 (228)
+ ....++|.+++||+++++++.+++++.+ +.++++.||+||+++.
T Consensus 423 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~ 501 (746)
T PTZ00342 423 RFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGP 501 (746)
T ss_pred HHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccce
Confidence 0 0125899999999999999999999888 7899999999999876
Q ss_pred eeeccCCCCCCCCCCccccC-CCceEEEEeCCCCCCCCCCCceEEEEecCcccc-------cccccccCCCeEEcCceEE
Q 027096 129 ATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMR-------ATKLTIDKKGWVHTGDLGY 200 (228)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-------~~~~~~~~~~~~~TGD~~~ 200 (228)
.+..... ....+++|.|+ |+++++++|.++....+.+..|||+++||.++. .+.+.++.+|||+|||+|+
T Consensus 502 ~~~~~~~--~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~ 579 (746)
T PTZ00342 502 IFVQHAD--DNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQ 579 (746)
T ss_pred eeeccCC--CCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEE
Confidence 5543332 34567999998 999999998655544455567999999999887 4556666789999999999
Q ss_pred EcCCCcEEEecccCCceee-cCeEeecC
Q 027096 201 FDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 201 ~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
+|+||.+++.||.+|+||. +|++|+|+
T Consensus 580 ~d~dG~l~i~gR~kdlIkls~Ge~I~p~ 607 (746)
T PTZ00342 580 INKNGSLTFLDRSKGLVKLSQGEYIETD 607 (746)
T ss_pred ECCCCeEEEEccCCCeEEeCCCEEEchH
Confidence 9999999999999999996 89999985
No 22
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.8e-36 Score=252.88 Aligned_cols=219 Identities=31% Similarity=0.520 Sum_probs=191.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|..|+...++.++.+|+++++.+.+++..+++.++++++|++.++|++++.+...+......
T Consensus 224 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~ 303 (546)
T PRK08314 224 LWSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERD 303 (546)
T ss_pred HhhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccC
Confidence 45678899999999999999999887889999999999999899999999999999999999999999998776555667
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+++++++.+++.+.+ +.++++.||+||++......... .....++|.|+++++++++|++++++++
T Consensus 304 ~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~ 380 (546)
T PRK08314 304 LSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELP 380 (546)
T ss_pred chhhheeeeccccCCHHHHHHHHHHc-CCcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCC
Confidence 78999999999999999999999988 68999999999998766544322 2245689999999999999978899999
Q ss_pred CCCceEEEEecCccccccc-------ccc---cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATK-------LTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~-------~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++++.++..+. ..+ +.++||+|||+++++++|.+++.||.||+||++|.+|+|+
T Consensus 381 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 452 (546)
T PRK08314 381 PGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPA 452 (546)
T ss_pred CCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHH
Confidence 9999999999998776322 111 2346999999999999999999999999999999999985
No 23
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-36 Score=251.32 Aligned_cols=220 Identities=33% Similarity=0.470 Sum_probs=193.6
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|..++...++.++..|+++++.+..++..+++.++++++|++.++|+++..+.+........
T Consensus 205 ~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 284 (523)
T PRK08316 205 VAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRD 284 (523)
T ss_pred HHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCC
Confidence 45678999999999999999998776777899999999998889999999999999999999999999998876666667
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+.+++++.+.+++.+++.++++.||+||++.++............+++|+|+++++++++| +++++++
T Consensus 285 ~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~ 363 (523)
T PRK08316 285 LSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVA 363 (523)
T ss_pred cccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCC
Confidence 889999999999999999999999998899999999999998776544333234457899999999999999 7789999
Q ss_pred CCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++|+.++..+ ...+ .++||+|||+|+++++|.+++.||.||+||++|.+|+|.
T Consensus 364 ~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~ 431 (523)
T PRK08316 364 PGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASR 431 (523)
T ss_pred CCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHH
Confidence 999999999999877522 2233 478999999999999999999999999999999999985
No 24
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-35 Score=246.89 Aligned_cols=215 Identities=21% Similarity=0.357 Sum_probs=186.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|+++...|++|..++.. ++.+++.|+++++.+.+++..+++.++++++|++.++|++++.+.+... .
T Consensus 177 ~~~~~~~~d~~~~~~~l~~~~~l~~-~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~ 251 (487)
T PRK07638 177 HDFHMKREDSVLIAGTLVHSLFLYG-AISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----V 251 (487)
T ss_pred HhcCcCCCCEEEEeecchHHHHHHH-HHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----c
Confidence 4567889999999999999988765 7889999999999999999999999999999999999999999987632 1
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
..+.+.++++|+++++++.+++.+.+++.++++.||+||++.++..... .......++|+|+++++++|+| +++++++
T Consensus 252 ~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~ 329 (487)
T PRK07638 252 IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDE-ESERRPNSVGRPFHNVQVRICN-EAGEEVQ 329 (487)
T ss_pred CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEeccc-ccCCCCCCCCcccCCcEEEEEC-CCCCCCC
Confidence 3456677889999999999999999999999999999999987665442 2234557899999999999999 7899999
Q ss_pred CCCceEEEEecCccccccccc------ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATKLT------IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~~~------~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++++.++..+... ...+|||+|||++++|++|.+++.||.+|+||++|.+|+|.
T Consensus 330 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~ 397 (487)
T PRK07638 330 KGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPE 397 (487)
T ss_pred CCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHH
Confidence 999999999999887633221 23578999999999999999999999999999999999984
No 25
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-35 Score=254.66 Aligned_cols=221 Identities=30% Similarity=0.415 Sum_probs=185.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
..++++++|++++.+|++|..++...++.+|++|+++++.++ +++..+++.|+++++|++.++|++++.+++....
T Consensus 280 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 359 (637)
T PRK00174 280 YVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDE 359 (637)
T ss_pred hccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCc
Confidence 456889999999999999999987778899999999998753 4799999999999999999999999999876432
Q ss_pred --CCCCCCCceEEEEcccCCCHHHHHHHHHhCCC--CeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEe
Q 027096 82 --KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 157 (228)
Q Consensus 82 --~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~--~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d 157 (228)
....+++||.++++|+++++++.+++.+.++. +++++.||+||++.++............+++|+|+++++++++|
T Consensus 360 ~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d 439 (637)
T PRK00174 360 HPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD 439 (637)
T ss_pred ccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC
Confidence 23567899999999999999999999998743 78999999999988765432221123456899999999999999
Q ss_pred CCCCCCCCCCCceEEEEecC--cccccc-------cccc--cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeec
Q 027096 158 VDTQKPLPPNQLGEIWLRGP--NMMRAT-------KLTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 226 (228)
Q Consensus 158 ~~~~~~~~~g~~Gel~v~~~--~~~~~~-------~~~~--~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p 226 (228)
+++++++.|+.|||+++++ .++..+ ...+ ..+|||+|||+++++++|.++++||.||+||++|++|+|
T Consensus 440 -~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p 518 (637)
T PRK00174 440 -EEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGT 518 (637)
T ss_pred -CCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECH
Confidence 8899999999999999995 444421 1111 247899999999999999999999999999999999998
Q ss_pred C
Q 027096 227 N 227 (228)
Q Consensus 227 ~ 227 (228)
.
T Consensus 519 ~ 519 (637)
T PRK00174 519 A 519 (637)
T ss_pred H
Confidence 4
No 26
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-35 Score=248.38 Aligned_cols=220 Identities=30% Similarity=0.457 Sum_probs=192.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++.+|+++...|++|.+++....+.+++.|+++++.+.+++..+++.++++++|.++++|+++..++.........
T Consensus 183 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~ 262 (497)
T PRK06145 183 IALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFD 262 (497)
T ss_pred HhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccc
Confidence 44678999999999999999998776778899999999998899999999999999999999999999998876655666
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.+++||+++++++.+++.+.|++.++++.||+||++..+............+++|+|+++++++++| +++++++
T Consensus 263 ~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~ 341 (497)
T PRK06145 263 LDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRWLP 341 (497)
T ss_pred cccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCCCC
Confidence 789999999999999999999999998899999999999998655433222233456899999999999999 7788999
Q ss_pred CCCceEEEEecCccccccc-------ccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATK-------LTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~-------~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++|+.++..+. ..+ .++||+|||+++++++|.++++||.||+||++|.+|+|.
T Consensus 342 ~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~ 409 (497)
T PRK06145 342 PNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASS 409 (497)
T ss_pred CCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHH
Confidence 9999999999998876332 223 368999999999999999999999999999999999984
No 27
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-35 Score=249.86 Aligned_cols=216 Identities=24% Similarity=0.375 Sum_probs=186.0
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~ 84 (228)
.+..+++|++++.+|++|.+++.. ++.++..|+++++.+.+++..+++.|+++++|++..+|++++.+++.... ...
T Consensus 231 ~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~ 309 (537)
T PRK13382 231 RTPWRAEEPTVIVAPMFHAWGFSQ-LVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRY 309 (537)
T ss_pred hhCCCCCCeEEEecChHhhhHHHH-HHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccC
Confidence 456778999999999999999865 78899999999998889999999999999999999999999999875432 233
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
++.++|.++++|+++++++.+.+.+.+ +..+++.||+||++.++..+... .....+++|+|+++++++++| ++++++
T Consensus 310 ~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~~~~~~i~d-~~~~~~ 386 (537)
T PRK13382 310 SGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGMIATATPAD-LRAAPDTAGRPAEGTEIRILD-QDFREV 386 (537)
T ss_pred CccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCcceecChhH-hccCCCCccccCcCcEEEEEC-CCCCCC
Confidence 456899999999999999999999998 56799999999999876544322 123557899999999999999 788999
Q ss_pred CCCCceEEEEecCcccccccc----cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKL----TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~----~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+++++.++..+.. .+ .+|||+|||+++++++|.+++.||.||+||.+|.+|+|.
T Consensus 387 ~~g~~GEl~v~g~~~~~gY~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~ 452 (537)
T PRK13382 387 PTGEVGTIFVRNDTQFDGYTSGSTKDF-HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPI 452 (537)
T ss_pred CCCCeeEEEEEcCCcccCccccchhhc-cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHH
Confidence 999999999999988774421 12 368999999999999999999999999999999999984
No 28
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.4e-36 Score=256.76 Aligned_cols=217 Identities=24% Similarity=0.308 Sum_probs=179.8
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--CC----HHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FD----LEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
.+....+|++++.+|++|+.+... ++.+|..|+++++.++ +. +..+++.++++++|++.++|++++.|++...
T Consensus 290 ~~~~~~~d~~~~~~~~~w~~~~~~-~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 368 (647)
T PTZ00237 290 IIEKDIPTVVFSHSSIGWVSFHGF-LYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDP 368 (647)
T ss_pred hcCCCCCcEEEEcCCCceEeeHHH-HHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCc
Confidence 356777899999999999976654 7899999999999764 12 6889999999999999999999999987432
Q ss_pred -----CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEE
Q 027096 81 -----VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALI 155 (228)
Q Consensus 81 -----~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i 155 (228)
....++++||.++++|+++++++.+++++.+ +.++++.||+||++........ ......+++|+|++++++++
T Consensus 369 ~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i 446 (647)
T PTZ00237 369 EATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSI 446 (647)
T ss_pred cccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEE
Confidence 1335678999999999999999999999988 6899999999999876543322 11233478999999999999
Q ss_pred EeCCCCCCCCCCCceEEEEecCc---ccc-------ccccccc-CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 156 VSVDTQKPLPPNQLGEIWLRGPN---MMR-------ATKLTID-KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 156 ~d~~~~~~~~~g~~Gel~v~~~~---~~~-------~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
+| ++|++++.|+.|||++++|. ++. .+...+. .+|||+|||+|++|++|.++++||+||+||++|+||
T Consensus 447 ~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI 525 (647)
T PTZ00237 447 LS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKV 525 (647)
T ss_pred EC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEe
Confidence 99 78999999999999999873 333 1222332 268999999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
+|.
T Consensus 526 ~p~ 528 (647)
T PTZ00237 526 QLN 528 (647)
T ss_pred CHH
Confidence 984
No 29
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.3e-35 Score=270.54 Aligned_cols=222 Identities=31% Similarity=0.441 Sum_probs=191.9
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
.+.++.+++|++++.+|++|..++...++.+++.|+++++.+ .+++..+++.++++++|++.++|++++.+.+.....+
T Consensus 815 ~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 894 (1146)
T PRK08633 815 SDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHP 894 (1146)
T ss_pred HHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCc
Confidence 345778899999999999999999877889999999998876 4789999999999999999999999999988766566
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC--------CCCCCCCccccCCCceEEE
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA--------GSRNIGSAGALAPGVEALI 155 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~--------~~~~~~~~g~p~~~~~~~i 155 (228)
..++++|.+++||+++++++.+++++.+ +.++++.||+||+++++....... .....+++|+|++++++++
T Consensus 895 ~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i 973 (1146)
T PRK08633 895 LMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRI 973 (1146)
T ss_pred ccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEE
Confidence 6788999999999999999999999988 689999999999988765432211 0124568999999999999
Q ss_pred EeCCCCCCCCCCCceEEEEecCccccccc-------cccc---CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 156 VSVDTQKPLPPNQLGEIWLRGPNMMRATK-------LTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 156 ~d~~~~~~~~~g~~Gel~v~~~~~~~~~~-------~~~~---~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
+|++++++++.|+.|||+++|+.++..+. +.+. .++||+|||++++|+||.+++.||.||+||++|++|+
T Consensus 974 ~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~ 1053 (1146)
T PRK08633 974 VDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVP 1053 (1146)
T ss_pred EcCCCCccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEEC
Confidence 99888999999999999999998876322 2221 2389999999999999999999999999999999999
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
|.
T Consensus 1054 ~~ 1055 (1146)
T PRK08633 1054 LG 1055 (1146)
T ss_pred HH
Confidence 84
No 30
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.5e-35 Score=250.75 Aligned_cols=223 Identities=28% Similarity=0.453 Sum_probs=192.7
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEE-cCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIIL-MAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~-~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
...++++++|+++..+|++|..++...++.++..|+++++ ...+++..+++.++++++|.++++|+++..++.......
T Consensus 232 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~ 311 (559)
T PRK08315 232 GEAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFAR 311 (559)
T ss_pred HHhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCC
Confidence 3567889999999999999999998888999999999985 456899999999999999999999999998887766556
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC-CCCCCCCccccCCCceEEEEeCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQK 162 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~i~d~~~~~ 162 (228)
..++++|.++++|+++++++.+++++.++..++++.||+||++.++....... ......++|+|+++++++++|+++++
T Consensus 312 ~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~ 391 (559)
T PRK08315 312 FDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGE 391 (559)
T ss_pred CCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCC
Confidence 67889999999999999999999999986677999999999988765543322 12345789999999999999976699
Q ss_pred CCCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 163 PLPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 163 ~~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++.|+.|||+|+++.++..+ ...+..++||+|||+++++++|.++++||.||+||.+|.+|+|.
T Consensus 392 ~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~ 463 (559)
T PRK08315 392 TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPR 463 (559)
T ss_pred cCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHH
Confidence 999999999999999877632 23334678999999999999999999999999999999999874
No 31
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1e-35 Score=256.98 Aligned_cols=217 Identities=28% Similarity=0.408 Sum_probs=177.6
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC-----
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL----- 80 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~----- 80 (228)
..+++.++|++++.+|++|++++.. ++.++..|+++++.+. ++..+++.|+++++|+++++|++++.+.+...
T Consensus 255 ~~~~~~~~d~~l~~lPl~h~~~~~~-~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~ 332 (651)
T PLN02736 255 LSTKFYPSDVHISYLPLAHIYERVN-QIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKE 332 (651)
T ss_pred hccCCCCCCEEEEeCCHHHHHHHHH-HHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhc
Confidence 4567889999999999999999986 7788999999988764 78899999999999999999999987754310
Q ss_pred -----------------------CCC-------------CCC-CCceEEEEcccCCCHHHHHHHHHhCCCCeEEeccccc
Q 027096 81 -----------------------VKK-------------FDL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLT 123 (228)
Q Consensus 81 -----------------------~~~-------------~~~-~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~t 123 (228)
... ..+ .++|.+++||+++++++.+++++.+ +.++++.||+|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~T 411 (651)
T PLN02736 333 SGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMT 411 (651)
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechH
Confidence 000 001 4799999999999999999999888 68899999999
Q ss_pred ccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC---CCCCCceEEEEecCccccc-------ccccccCCCeE
Q 027096 124 ETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP---LPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWV 193 (228)
Q Consensus 124 E~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~---~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~ 193 (228)
|+++.++..... ....+++|+|+|+++++++|.+++.. ..+++.|||+++||.++.. +...++.+|||
T Consensus 412 E~~~~~~~~~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~ 489 (651)
T PLN02736 412 ETSCVISGMDEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWL 489 (651)
T ss_pred HhchheeccCCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCe
Confidence 998766543322 23567899999999999998443322 2234569999999999873 34455568999
Q ss_pred EcCceEEEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 194 HTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 194 ~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
+|||+|++|+||.++++||.||+||+ +|++|+|+
T Consensus 490 ~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~ 524 (651)
T PLN02736 490 HTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPE 524 (651)
T ss_pred eccceEEEcCCCcEEEEEechhheEcCCCcEechH
Confidence 99999999999999999999999997 79999985
No 32
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-35 Score=255.45 Aligned_cols=216 Identities=19% Similarity=0.267 Sum_probs=186.5
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
.+++++.|++++.+|++|..++...++.+|..|+++++.+ .+++..+...++++++|+++++|+++..+.+... ...
T Consensus 181 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~ 258 (705)
T PRK06060 181 ALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDS 258 (705)
T ss_pred hhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--ccc
Confidence 4678899999999999999988766889999999999986 4788889999999999999999999999887542 234
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+++++++.+++.+.|++.+++|.||+||++.++...... ....+++|+|+++++++++| +++++++
T Consensus 259 ~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d-~~g~~~~ 335 (705)
T PRK06060 259 FRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVA-PDGTTAG 335 (705)
T ss_pred ccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCC--CCCcCcccccCCCcEEEEEC-CCCCCCC
Confidence 67899999999999999999999999889999999999998765443221 22456899999999999999 7789999
Q ss_pred CCCceEEEEecCcccccccc----cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATKL----TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~~----~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+|+|+.++..+.. ....++||+|||+++++++|.++++||.||+||++|++|+|.
T Consensus 336 ~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~ 401 (705)
T PRK06060 336 PGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPR 401 (705)
T ss_pred CCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHH
Confidence 99999999999998874322 223578999999999999999999999999999999999984
No 33
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.4e-35 Score=249.24 Aligned_cols=218 Identities=30% Similarity=0.424 Sum_probs=186.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC--CC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VK 82 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~ 82 (228)
..++++++|++++..|++|..|+...++.++..|+++++.+ .+++..+++.++++++|+++++|++++.+.+... ..
T Consensus 239 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 318 (570)
T PRK04319 239 YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVK 318 (570)
T ss_pred HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccc
Confidence 45778899999999999999998777899999999998875 5899999999999999999999999999987542 23
Q ss_pred CCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCC
Q 027096 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 162 (228)
Q Consensus 83 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 162 (228)
...++++|.++++|+++++++.+++++.+ +.++++.||+||++.++...... .....+++|+|+++++++++| ++++
T Consensus 319 ~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d-~~~~ 395 (570)
T PRK04319 319 KYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVD-DQGN 395 (570)
T ss_pred cCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEEC-CCCC
Confidence 35678999999999999999999999988 68899999999998765443222 123457899999999999999 7788
Q ss_pred CCCCCCceEEEEec--Ccccc-------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 163 PLPPNQLGEIWLRG--PNMMR-------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 163 ~~~~g~~Gel~v~~--~~~~~-------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++.|+.|||++++ +.++. .+...+ .+|||+|||+++++++|.++++||.||+||.+|++|+|.
T Consensus 396 ~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~-~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~ 468 (570)
T PRK04319 396 ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYF-AGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPF 468 (570)
T ss_pred CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhh-cCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHH
Confidence 89999999999997 55554 223333 378999999999999999999999999999999999985
No 34
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.7e-35 Score=246.58 Aligned_cols=219 Identities=26% Similarity=0.380 Sum_probs=187.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..+.++++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.++++++|+++.+|++++.+.+.......
T Consensus 217 ~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~ 296 (527)
T TIGR02275 217 EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRY 296 (527)
T ss_pred hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCC
Confidence 4567889999999999999998865 367889999999998888999999999999999999999999999887665566
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccC-CCceEEEEeCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKP 163 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~ 163 (228)
.++++|.+++||+++++++.+++.+.+ +.++++.||+||++...... ........+++|+|+ ++.+++++| +++++
T Consensus 297 ~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~ 373 (527)
T TIGR02275 297 DLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFGMAEGLVNYTRL-DDPAEIIFTTQGRPMSPDDEVRVVD-DHGNP 373 (527)
T ss_pred CccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeeccCccCccccCC-CCccccccccCCCCCCCCceEEEEC-CCCCC
Confidence 788999999999999999999999988 78999999999965433221 111123446789999 578999999 78899
Q ss_pred CCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++|+.++.. +...++.++||+|||+++++++|++++.||.||+||++|.+|+|.
T Consensus 374 ~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ 444 (527)
T TIGR02275 374 VAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAE 444 (527)
T ss_pred CCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHH
Confidence 9999999999999998863 233455689999999999999999999999999999999999985
No 35
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=7.3e-35 Score=247.31 Aligned_cols=216 Identities=41% Similarity=0.738 Sum_probs=184.8
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCC--Cc
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS--SL 89 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~--~l 89 (228)
..++.+.++|++|.+++...++.+|..|+++++.+.+++..+++.++++++|.+.++|+++..+.+........+. .+
T Consensus 226 ~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l 305 (546)
T PLN02330 226 GQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKL 305 (546)
T ss_pred CceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchhee
Confidence 3468999999999999887688999999999999999999999999999999999999999999886544444444 47
Q ss_pred eEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC---CCCCCCCccccCCCceEEEEeCCCCCCCCC
Q 027096 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (228)
Q Consensus 90 r~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 166 (228)
|.++++|+++++++.+++.+.|++.++++.||+||++++........ ......++|.|+++++++++|++++++++.
T Consensus 306 ~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~ 385 (546)
T PLN02330 306 QAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPK 385 (546)
T ss_pred eeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCC
Confidence 89999999999999999999998899999999999987654332111 112345799999999999999888899999
Q ss_pred CCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 167 NQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 167 g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+.|||+++|+.++.. +...++.+|||+|||++++++||.+++.||.||+||++|++|+|.
T Consensus 386 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~ 453 (546)
T PLN02330 386 NTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPA 453 (546)
T ss_pred CCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHH
Confidence 9999999999987762 233445689999999999999999999999999999999999985
No 36
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.9e-35 Score=254.21 Aligned_cols=213 Identities=27% Similarity=0.429 Sum_probs=169.8
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcC----------
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG---------- 79 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~---------- 79 (228)
++++|++++.+|++|+++... .+.+++.|+++++.+ +++..+++.|+++++|+++++|++++.+.+..
T Consensus 263 ~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~ 340 (660)
T PLN02861 263 ATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGML 340 (660)
T ss_pred CCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHH
Confidence 468899999999999999876 556899999998874 58999999999999999999999999886410
Q ss_pred ---------------------------CCCCC-------CC-CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccc
Q 027096 80 ---------------------------LVKKF-------DL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTE 124 (228)
Q Consensus 80 ---------------------------~~~~~-------~~-~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE 124 (228)
..... .+ .++|.+++||+++++++.+ +.+.++...+++.||+||
T Consensus 341 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE 419 (660)
T PLN02861 341 RKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTE 419 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhh
Confidence 00000 11 4789999999999999854 666664567999999999
Q ss_pred cCCceeeccCCCCCCCCCCccccCCCceEEEEeC-CCC-CCCCCCCceEEEEecCccccc-------ccccccCCCeEEc
Q 027096 125 TSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQ-KPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHT 195 (228)
Q Consensus 125 ~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~T 195 (228)
+++.+....... ....+++|+|+++++++++|. +.| ...+.++.|||+++|+.++.. +.+.+ .+|||+|
T Consensus 420 ~~~~~~~~~~~~-~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~T 497 (660)
T PLN02861 420 SCGGCFTSIANV-FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHT 497 (660)
T ss_pred hhhceeeccccc-CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCccc
Confidence 987654432221 224578999999999999983 334 344556789999999998873 34445 4799999
Q ss_pred CceEEEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 196 GDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 196 GD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
||+|++|+||.++|.||+||+||. +|++|+|+
T Consensus 498 GDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~ 530 (660)
T PLN02861 498 GDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVE 530 (660)
T ss_pred CceEEECCCCcEEEEeccccceEcCCCeEEcHH
Confidence 999999999999999999999997 89999985
No 37
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-34 Score=244.18 Aligned_cols=217 Identities=23% Similarity=0.303 Sum_probs=186.4
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~ 84 (228)
.++++++|+++..+|++|.+++.. ++.++..|+++++.+.+++..+++.++++++|.++++|+++..+.+.... ...
T Consensus 211 ~~~~~~~d~~~~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 289 (516)
T PRK13383 211 RTRLRTGSRISVAMPMFHGLGLGM-LMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARN 289 (516)
T ss_pred hhccCCCCeEEEecCCcchhhHHH-HHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccC
Confidence 456789999999999999999976 78889999999998889999999999999999999999999999875432 223
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
.++++|.++++|+++++++.+++.+.+ +..+++.||+||++..+...... ......++|+|+++++++++| ++++++
T Consensus 290 ~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d-~~~~~~ 366 (516)
T PRK13383 290 PLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATPAD-LRDAPETVGKPVAGCPVRILD-RNNRPV 366 (516)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceeccccc-cccCCCcccCCCCCcEEEEEC-CCCCCC
Confidence 568899999999999999999999998 67899999999998765443322 123456899999999999999 778999
Q ss_pred CCCCceEEEEecCccccccccc---ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKLT---IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~~---~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+++|+..+..+... ...+|||+|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 367 ~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~ 432 (516)
T PRK13383 367 GPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPR 432 (516)
T ss_pred CCCCceEEEEecCcccccccCCchhheecCceecceeEEEcCCccEEEeccccceEEECCEEECHH
Confidence 9999999999999887633221 12468999999999999999999999999999999999985
No 38
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.5e-34 Score=243.11 Aligned_cols=218 Identities=31% Similarity=0.468 Sum_probs=189.5
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++++++|++++.+|++|..++...++.+++.|+++++.+..++..+++.+. ++|.+..+|+++..+++.......
T Consensus 189 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~ 266 (504)
T PRK07514 189 VDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTRE 266 (504)
T ss_pred HHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcc
Confidence 345778999999999999999998877889999999999999899999999994 799999999999999887666666
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
.++++|.++.||+++++++.+.+.+.+ +.++++.||+||++........ ......++|.|+++++++++|+++++++
T Consensus 267 ~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~G~~~~~~~v~i~d~~~~~~~ 343 (504)
T PRK07514 267 AAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTSNPYD--GERRAGTVGFPLPGVSLRVTDPETGAEL 343 (504)
T ss_pred cccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccccCCcc--ccccCcccccCCCCcEEEEEECCCCCCC
Confidence 788999999999999999999999988 6789999999999865543221 1233468999999999999998889999
Q ss_pred CCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+++++.++.. +...+..++||+|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 344 ~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~ 413 (504)
T PRK07514 344 PPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPK 413 (504)
T ss_pred CCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHH
Confidence 999999999999988762 233444578999999999999999999999999999999999984
No 39
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-34 Score=248.82 Aligned_cols=221 Identities=24% Similarity=0.330 Sum_probs=182.2
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC-
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~- 80 (228)
..++++++|++++.+|++|..+....++.+|+.|+++++.++ .++..+++.++++++|+++++|++++.+.+...
T Consensus 268 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 347 (629)
T PRK10524 268 TIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPA 347 (629)
T ss_pred HhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcc
Confidence 457889999999999999998877668899999999998763 478999999999999999999999999877532
Q ss_pred -CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccC--CCCCCCCCCccccCCCceEEEEe
Q 027096 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENS--FAGSRNIGSAGALAPGVEALIVS 157 (228)
Q Consensus 81 -~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~--~~~~~~~~~~g~p~~~~~~~i~d 157 (228)
.....+++||.++++|+++++++.+++.+.+ +.++++.||+||++..+..... .......+++|+|+++++++++|
T Consensus 348 ~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d 426 (629)
T PRK10524 348 LLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLN 426 (629)
T ss_pred cccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEe
Confidence 2345678999999999999999999999988 6889999999999853322211 11123456899999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCc---cccc-------ccc---cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 158 VDTQKPLPPNQLGEIWLRGPN---MMRA-------TKL---TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 158 ~~~~~~~~~g~~Gel~v~~~~---~~~~-------~~~---~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
.+++++++.|+.|||++++|. .+.. +.. ....++||+|||+++++++|.++++||.||+||++|.+|
T Consensus 427 ~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri 506 (629)
T PRK10524 427 EVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRL 506 (629)
T ss_pred CCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEe
Confidence 548999999999999999984 2221 000 111468999999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
+|.
T Consensus 507 ~p~ 509 (629)
T PRK10524 507 GTR 509 (629)
T ss_pred CHH
Confidence 984
No 40
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-34 Score=241.29 Aligned_cols=215 Identities=31% Similarity=0.471 Sum_probs=184.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|++++.. ++.++..|+++++.+..++..+++.++++++|++.++|+++..+.+..... ..
T Consensus 175 ~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~ 252 (483)
T PRK03640 175 LNLGLTEDDCWLAAVPIFHISGLSI-LMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TY 252 (483)
T ss_pred HhcCCCcCcEEEEecCHHHHHHHHH-HHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-cc
Confidence 3467899999999999999999876 789999999999999899999999999999999999999999998654322 33
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
..++|.++++|+++++.+.+.+++. +.++++.||+||++..+............+++|+|++++++++.+ ++ ++++
T Consensus 253 ~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~-~~-~~~~ 328 (483)
T PRK03640 253 PSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEK-DG-VVVP 328 (483)
T ss_pred CCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEec-CC-CcCC
Confidence 4689999999999999999998875 789999999999886554433332334567899999999999988 43 7899
Q ss_pred CCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++++.++..+ ...+ .++||+|||+++++++|.+++.||+||++|.+|.+|+|.
T Consensus 329 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~ 396 (483)
T PRK03640 329 PFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPA 396 (483)
T ss_pred CCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHH
Confidence 999999999999887632 2223 578999999999999999999999999999999999974
No 41
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-34 Score=244.56 Aligned_cols=221 Identities=29% Similarity=0.477 Sum_probs=190.7
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..++++++|++++.+|++|..|....++.++..|+++++.. .+++..+++.++++++|+++++|+++..++........
T Consensus 235 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~ 314 (558)
T PRK12583 235 ESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNF 314 (558)
T ss_pred HHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCC
Confidence 45788899999999999999999888899999999999754 57899999999999999999999999888876655556
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC-CCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.++++|.++++|+++++++.+++.+.++...+.+.||+||++.++....... ......++|+|.+++.++++|+ ++++
T Consensus 315 ~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~-~~~~ 393 (558)
T PRK12583 315 DLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDP-DGAT 393 (558)
T ss_pred CchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECC-CCCC
Confidence 7889999999999999999999999987778999999999998776543221 1234578999999999999995 4899
Q ss_pred CCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++++.++..+ ...+..++||+|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 394 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~ 464 (558)
T PRK12583 394 VPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPR 464 (558)
T ss_pred CCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHH
Confidence 99999999999999877622 22233678999999999999999999999999999999999985
No 42
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-34 Score=244.03 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=186.0
Q ss_pred cccC-CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 7 ETAG-ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 7 ~~~~-~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
.+++ .+++++++.+|++|.+|+.. ++.++..|+++++.+ .+++..+++.++++++|.++++|+++..++.......
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~ 287 (542)
T PRK07786 209 TNGADINSDVGFVGVPLFHIAGIGS-MLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP 287 (542)
T ss_pred hcCCCCCCceEEEecchHHHHHHHH-HHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc
Confidence 3455 57889999999999999866 889999999999865 5799999999999999999999999999987654333
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.. .++|.+++||+++++++.+++.+.|++.++++.||+||++.+..............++|+|++++.++++| +++++
T Consensus 288 ~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~ 365 (542)
T PRK07786 288 RD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMND 365 (542)
T ss_pred cC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCC
Confidence 22 36999999999999999999999998999999999999998766544433334567899999999999999 78899
Q ss_pred CCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++|+.++..+ ...+ .++||+|||+++++++|.++++||.||+||++|.+|+|.
T Consensus 366 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~ 435 (542)
T PRK07786 366 VPVGEVGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCA 435 (542)
T ss_pred CcCCCceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHH
Confidence 99999999999999887622 2233 468999999999999999999999999999999999984
No 43
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.5e-34 Score=244.13 Aligned_cols=219 Identities=28% Similarity=0.396 Sum_probs=188.1
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|.+++...++.+++.|+++++.+.+++..+++.+++++++.++.+|+.+..++.........
T Consensus 221 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~ 300 (547)
T PRK06087 221 ARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPAD 300 (547)
T ss_pred HhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCC
Confidence 44678899999999999999998887899999999999999899999999999999999998888887777765555567
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.+++||+++++++.+.+.+. ++++++.||+||++.+..............++|.|+++++++++| +++++++
T Consensus 301 ~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~ 377 (547)
T PRK06087 301 LSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLP 377 (547)
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCc
Confidence 7899999999999999999988775 789999999999988765433221122345789999999999999 8889999
Q ss_pred CCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++|+.++..+ ...++.++||+|||+++++++|.++++||.||+|+.+|.+|+|.
T Consensus 378 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~ 446 (547)
T PRK06087 378 PGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSR 446 (547)
T ss_pred CCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHH
Confidence 999999999999888632 23334578999999999999999999999999999999999985
No 44
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-34 Score=240.02 Aligned_cols=218 Identities=27% Similarity=0.431 Sum_probs=184.9
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHH--hcCceEEEechHHHHHHHhcCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIE--KHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
.+.+.++|++++.+|++|..++...++.++..|+++++.+.+++...+..+. ++++|+++++|+++..+.+.......
T Consensus 170 ~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~ 249 (488)
T PRK09088 170 LGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAA 249 (488)
T ss_pred hhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCcc
Confidence 4567889999999999999999887888999999999988889999988886 47899999999999999876554555
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCC-CCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF-AGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~-~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.++++|.+++||++++.+..+++.+. +.++++.||+||++.+....... ......+++|.|.++++++++| +++++
T Consensus 250 ~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~ 326 (488)
T PRK09088 250 ALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGND 326 (488)
T ss_pred ccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEEC-CCCCC
Confidence 67899999999999999998888765 68899999999998765322111 1123456899999999999999 77899
Q ss_pred CCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++++.++..+ ...+..+|||+|||+++++++|.+++.||.||+||.+|.+|+|+
T Consensus 327 ~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ 397 (488)
T PRK09088 327 CPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPA 397 (488)
T ss_pred CcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHH
Confidence 99999999999999887632 23344589999999999999999999999999999999999985
No 45
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-34 Score=244.71 Aligned_cols=213 Identities=32% Similarity=0.496 Sum_probs=186.3
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceE
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~ 91 (228)
.+|++++.+|++|.+|+...++.++..|+++++.+.++++.+++.++++++|++.++|++++.+.+........++++|.
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 340 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRN 340 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccE
Confidence 47899999999999998877888899999999998889999999999999999999999999999877666677889999
Q ss_pred EEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCC-CCCCCCCCce
Q 027096 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT-QKPLPPNQLG 170 (228)
Q Consensus 92 ~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~-~~~~~~g~~G 170 (228)
++++|+++++++.+++.+.+ +.++++.||+||+++++....... ....+++|+|++++.++++|+++ +++++.|+.|
T Consensus 341 i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~G 418 (573)
T PRK05605 341 AFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSD-DRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEG 418 (573)
T ss_pred EEECCCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCccc-CCcCCccccCCCCCEEEEEcCCCCCccCCCCCee
Confidence 99999999999999999887 688999999999998766543322 23457899999999999999665 6899999999
Q ss_pred EEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 171 EIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 171 el~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
||+++++.++..+ ...+ .+|||+|||+++++++|.+++.||.||+||.+|.+|+|+
T Consensus 419 el~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~ 481 (573)
T PRK05605 419 ELLVRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPA 481 (573)
T ss_pred EEEEecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHH
Confidence 9999998877632 2233 356999999999999999999999999999999999985
No 46
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-34 Score=238.75 Aligned_cols=217 Identities=28% Similarity=0.421 Sum_probs=184.7
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...+++.++|++++.+|++|..|+...++.++..|+++++.+.+++..+++.++ ++++.++++|+++..+.+... ...
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~ 238 (471)
T PRK07787 161 AEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AAR 238 (471)
T ss_pred HHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccc
Confidence 355778899999999999999999888999999999999998899999999999 999999999999999987533 234
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
.++++|.++.||+++++++.+++.+.+ +.++++.||+||++......... ....+++|+|+++++++++| ++++++
T Consensus 239 ~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~g~~~~i~d-~~~~~~ 314 (471)
T PRK07787 239 ALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTRADG--ERRPGWVGLPLAGVETRLVD-EDGGPV 314 (471)
T ss_pred cccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecCCCC--cccCCcccccCCCcEEEEEC-CCCCCC
Confidence 567899999999999999999999988 68899999999998754433221 23456899999999999999 667887
Q ss_pred C-CCC-ceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEeccc-CCceeecCeEeecC
Q 027096 165 P-PNQ-LGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI-KELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~-~g~-~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~-~d~i~~~G~~v~p~ 227 (228)
+ .|+ .|||+++|+.++.. +...+..++||+|||++++++||.++++||. ||++|.+|.+|+|+
T Consensus 315 ~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~ 387 (471)
T PRK07787 315 PHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAG 387 (471)
T ss_pred CCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHH
Confidence 6 344 79999999987762 3344445789999999999999999999996 89999999999985
No 47
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-34 Score=241.52 Aligned_cols=217 Identities=34% Similarity=0.516 Sum_probs=187.8
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
+.+++.++|++++.+|++|.+++. ++.++++|+++++.+.+++..+++.++++++|+++++|+++..+++........
T Consensus 202 ~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~ 279 (524)
T PRK06188 202 AEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRD 279 (524)
T ss_pred hhcCCCcCcEEEEecCchhhhhHH--HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCC
Confidence 457788999999999999998874 578899999999999999999999999999999999999999999887666677
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC----CCCCCCCccccCCCceEEEEeCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA----GSRNIGSAGALAPGVEALIVSVDTQ 161 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~----~~~~~~~~g~p~~~~~~~i~d~~~~ 161 (228)
++++|.+++||++++++..+.+.+.+ +..+++.||+||++..+....... ......++|+|+++++++++| +++
T Consensus 280 l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~ 357 (524)
T PRK06188 280 LSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDG 357 (524)
T ss_pred CcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEc-CCC
Confidence 88999999999999999999998888 577999999999976655433221 123456789999999999999 678
Q ss_pred CCCCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 162 KPLPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 162 ~~~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++++.|+.|||+++++.++..+ ...+ .+|||+|||+++++++|.+++.||.||+|+++|.+|+|+
T Consensus 358 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~ 429 (524)
T PRK06188 358 REVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPR 429 (524)
T ss_pred CCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEeccccceecCCEEECHH
Confidence 9999999999999999877522 2223 468999999999999999999999999999999999985
No 48
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-34 Score=241.03 Aligned_cols=219 Identities=38% Similarity=0.575 Sum_probs=190.9
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
.+.++++++|++++.+|++|..++.. .+.++..|+++++.+..++..+++.++++++|.++++|++++.+.+.......
T Consensus 200 ~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~ 278 (521)
T PRK06187 200 CAWLKLSRDDVYLVIVPMFHVHAWGL-PYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFV 278 (521)
T ss_pred HHhhCCCCCCEEEEeCCchHHhhHHH-HHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCcc
Confidence 45678999999999999999999887 45599999999999888999999999999999999999999999988766667
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC----CCCCCCccccCCCceEEEEeCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG----SRNIGSAGALAPGVEALIVSVDT 160 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~----~~~~~~~g~p~~~~~~~i~d~~~ 160 (228)
.++++|.++++|+++++++.+++.+.+ ++++++.||+||++.+......... .....++|+|+++++++++| ++
T Consensus 279 ~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~ 356 (521)
T PRK06187 279 DFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DD 356 (521)
T ss_pred CcchhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CC
Confidence 788999999999999999999999998 8999999999999887665433221 12567899999999999999 67
Q ss_pred CCCCCC--CCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 161 QKPLPP--NQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 161 ~~~~~~--g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++++. |+.|||+++++..... +...+ .++||+|||+++++++|.+++.||.||+||.+|.+|+|.
T Consensus 357 ~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~-~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~ 431 (521)
T PRK06187 357 GDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI-DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPR 431 (521)
T ss_pred CCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh-hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHH
Confidence 888888 9999999999887652 22233 456999999999999999999999999999999999974
No 49
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.5e-34 Score=242.74 Aligned_cols=215 Identities=28% Similarity=0.427 Sum_probs=176.2
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-------CCCHHHHHHHHHhcCceEEEechHHHHHHHh
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-------KFDLEMFLRAIEKHRVTHIWVVPPLILALAK 77 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~ 77 (228)
...++++++|++++.+|++|..+ +..|.++++.+ .+++..+++.|+++++|+++++|++++.+.+
T Consensus 207 ~~~~~~~~~~~~~~~~pl~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 278 (552)
T PRK09274 207 REDYGIEPGEIDLPTFPLFALFG--------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGR 278 (552)
T ss_pred HHHhCCCCCceeeeccCHHHhhh--------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHH
Confidence 34578899999999999987543 33477877754 3588999999999999999999999999988
Q ss_pred cCCCCCCCCCCceEEEEcccCCCHHHHHHHHHhCC-CCeEEecccccccCCceeeccCC------C--CCCCCCCccccC
Q 027096 78 HGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSF------A--GSRNIGSAGALA 148 (228)
Q Consensus 78 ~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-~~~l~~~yG~tE~g~~~~~~~~~------~--~~~~~~~~g~p~ 148 (228)
........++++|.++++|+++++++.+++++.|+ +.++++.||+||++.++...... . ......++|+|+
T Consensus 279 ~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 358 (552)
T PRK09274 279 YGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPV 358 (552)
T ss_pred HhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccC
Confidence 76555567889999999999999999999999996 37999999999998765543211 0 011223689999
Q ss_pred CCceEEEEeCC--------CCCCCCCCCceEEEEecCcccccccc-------cc--cCCC--eEEcCceEEEcCCCcEEE
Q 027096 149 PGVEALIVSVD--------TQKPLPPNQLGEIWLRGPNMMRATKL-------TI--DKKG--WVHTGDLGYFDGDGQLYV 209 (228)
Q Consensus 149 ~~~~~~i~d~~--------~~~~~~~g~~Gel~v~~~~~~~~~~~-------~~--~~~~--~~~TGD~~~~~~~g~~~~ 209 (228)
++++++|+|++ ++++++.|+.|||+++|+.++..+.. .+ +.+| ||+|||+|++|++|.+++
T Consensus 359 ~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~ 438 (552)
T PRK09274 359 DGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWF 438 (552)
T ss_pred CCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEE
Confidence 99999999842 46788999999999999998863321 11 2355 999999999999999999
Q ss_pred ecccCCceeecCeEeecC
Q 027096 210 VDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 210 ~GR~~d~i~~~G~~v~p~ 227 (228)
+||.||+||++|.+|+|+
T Consensus 439 ~GR~~d~i~~~G~~v~p~ 456 (552)
T PRK09274 439 CGRKAHRVETAGGTLYTI 456 (552)
T ss_pred EeccCCeEEECCEEECcH
Confidence 999999999999999985
No 50
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.7e-34 Score=241.20 Aligned_cols=211 Identities=28% Similarity=0.535 Sum_probs=181.8
Q ss_pred CcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceE
Q 027096 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~ 91 (228)
.+++++.+|++|.+++...++.++..|.+.++.+ ..++..+++.++++++|.++++|+++..+.+........++++|.
T Consensus 251 ~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~ 330 (562)
T PRK05677 251 CEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKL 330 (562)
T ss_pred ccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceE
Confidence 4688999999999998766778888898877665 468999999999999999999999999998765444455778999
Q ss_pred EEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceE
Q 027096 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (228)
Q Consensus 92 ~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 171 (228)
+++||+++++++.+++++.+ +.++++.||+||++.++...... ....+++|.|+++++++++| +++++++.|+.||
T Consensus 331 v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Ge 406 (562)
T PRK05677 331 TLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGE 406 (562)
T ss_pred EEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeE
Confidence 99999999999999999987 78999999999998776544322 23456899999999999999 6789999999999
Q ss_pred EEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 172 IWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 172 l~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+++|+.++.. +...+..++||+|||+++++++|.+++.||.+|+||++|.+|+|.
T Consensus 407 l~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~ 469 (562)
T PRK05677 407 LCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPN 469 (562)
T ss_pred EEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHH
Confidence 99999988763 333455689999999999999999999999999999999999985
No 51
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=8.5e-34 Score=232.50 Aligned_cols=218 Identities=24% Similarity=0.323 Sum_probs=184.8
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCC---HHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
.+.++++++|++++..|++|..++.. ++.++..|+++++.+... +..+.+.++++++|.+.++|++++.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~- 230 (408)
T TIGR01733 153 ARRYGLDPDDRVLQFASLSFDASVEE-IFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP- 230 (408)
T ss_pred HHhcCCCCCceEEEecCCccchhHHH-HHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh-
Confidence 34677889999999999999998876 899999999999987643 6889999999999999999999999988754
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC-CC--CCCCccccCCCceEEEEeC
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SR--NIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~-~~--~~~~~g~p~~~~~~~i~d~ 158 (228)
..++++|.++.+|+++++++.+++++.+++..+++.||+||++.++........ .. ...++|+|+++++++|+|
T Consensus 231 --~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~- 307 (408)
T TIGR01733 231 --PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD- 307 (408)
T ss_pred --hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-
Confidence 557899999999999999999999999976999999999999987753222111 11 256899999999999999
Q ss_pred CCCCCCCCCCceEEEEecCccccccc-------ccccC------CC--eEEcCceEEEcCCCcEEEecccCCceeecCeE
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMRATK-------LTIDK------KG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 223 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~~~~-------~~~~~------~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~ 223 (228)
+++++++.|+.|||+++++.++..+. ..+.. ++ ||+|||+++++++|++++.||.||+|+.+|++
T Consensus 308 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~ 387 (408)
T TIGR01733 308 DDLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYR 387 (408)
T ss_pred CCCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEE
Confidence 45899999999999999998876332 12211 23 99999999999999999999999999999999
Q ss_pred eecC
Q 027096 224 VTSN 227 (228)
Q Consensus 224 v~p~ 227 (228)
|+|.
T Consensus 388 v~~~ 391 (408)
T TIGR01733 388 IELG 391 (408)
T ss_pred echH
Confidence 9985
No 52
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.8e-34 Score=243.76 Aligned_cols=221 Identities=28% Similarity=0.368 Sum_probs=174.2
Q ss_pred cccccCC-CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--C--CHHHHHHHHHhcCceEEEechHHHHHHHhcC
Q 027096 5 DQETAGE-LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIEKHRVTHIWVVPPLILALAKHG 79 (228)
Q Consensus 5 ~~~~~~~-~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~ 79 (228)
.+.++++ ++|++++++|++|.+++.. ++.+++.|+++++.+. + ++..+++.++++++|.+..+|.++..+....
T Consensus 185 ~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~ 263 (525)
T PRK05851 185 NARVGLDAATDVGCSWLPLYHDMGLAF-LLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYA 263 (525)
T ss_pred HHHhCCCCCCCeEEEcCCCccCccHHH-HHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhh
Confidence 3456777 8999999999999999976 7899999999999763 3 5778999999999998765554444443322
Q ss_pred C-CCCCCCCCceEEEEcccCCCHHHHHHHHHh---C--CCCeEEecccccccCCceeeccCCC-------------CCCC
Q 027096 80 L-VKKFDLSSLKLVGSGAAPLGKELMEECAKN---V--PSATVIQGYGLTETSGIATMENSFA-------------GSRN 140 (228)
Q Consensus 80 ~-~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~---~--~~~~l~~~yG~tE~g~~~~~~~~~~-------------~~~~ 140 (228)
. .....++++|.++++|+++++++.++|.+. + +..++++.||+||++..+....... ....
T Consensus 264 ~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (525)
T PRK05851 264 RRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARR 343 (525)
T ss_pred ccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccce
Confidence 1 233457889999999999999999998874 2 2346999999999987655432110 0123
Q ss_pred CCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCccccccccc--ccCCCeEEcCceEEEcCCCcEEEecccCCcee
Q 027096 141 IGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRATKLT--IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIK 218 (228)
Q Consensus 141 ~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~~~~--~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~ 218 (228)
..++|+|+++++++|+|.+.+.+++.|+.|||+++|+.++..+... ...++||+|||+++++ +|.++++||.||+||
T Consensus 344 ~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~ 422 (525)
T PRK05851 344 HAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-DGGLVVCGRAKELIT 422 (525)
T ss_pred eeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-CCEEEEEeecCCEEE
Confidence 4578999999999999955556789999999999999988754322 2347899999999996 799999999999999
Q ss_pred ecCeEeecC
Q 027096 219 YKGFQVTSN 227 (228)
Q Consensus 219 ~~G~~v~p~ 227 (228)
++|+||+|.
T Consensus 423 ~~G~~v~p~ 431 (525)
T PRK05851 423 VAGRNIFPT 431 (525)
T ss_pred ECCEEeCHH
Confidence 999999984
No 53
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.2e-34 Score=248.32 Aligned_cols=213 Identities=24% Similarity=0.423 Sum_probs=179.3
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
...++++++|++++.+|++|.+++...++.++..|+++++.+. ++...+.+.++++++|.++.+|+++..+.+.. ..
T Consensus 398 ~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~ 475 (718)
T PRK08043 398 KTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NP 475 (718)
T ss_pred HHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--Cc
Confidence 3456789999999999999999987778899999999998864 57788899999999999999999998876542 23
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.++++||.+++||+++++++.+.+++.+ ++++++.||+||++.++...... ....+++|+|+++++++++| +++.
T Consensus 476 ~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d-~~~~- 550 (718)
T PRK08043 476 YDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLS-VPGI- 550 (718)
T ss_pred ccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEec-CCCC-
Confidence 4578999999999999999999999988 78999999999998776543322 23467899999999999998 4432
Q ss_pred CCCCCceEEEEecCcccccccc----------------cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRATKL----------------TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~~~----------------~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|||+++|+.++..+.. ....+|||+|||+|++|+||.+++.||.||+||++|++|+|.
T Consensus 551 ---~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~ 627 (718)
T PRK08043 551 ---EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLE 627 (718)
T ss_pred ---CCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHH
Confidence 4569999999998874322 012368999999999999999999999999999999999984
No 54
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.4e-34 Score=241.66 Aligned_cols=205 Identities=32% Similarity=0.461 Sum_probs=173.9
Q ss_pred cccc-CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhc------
Q 027096 6 QETA-GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKH------ 78 (228)
Q Consensus 6 ~~~~-~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~------ 78 (228)
..+. ++++|++++++|+.|++.........+..|++.+... ++..+++.+...+||.+..+|.+++.+-+.
T Consensus 225 ~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~--~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~ 302 (613)
T COG1022 225 EVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKE--DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVA 302 (613)
T ss_pred hhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecC--CHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHH
Confidence 3454 8899999999999999999865555566666655544 899999999999999999999998866431
Q ss_pred --CCC----------------------------------------CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeE
Q 027096 79 --GLV----------------------------------------KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATV 116 (228)
Q Consensus 79 --~~~----------------------------------------~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l 116 (228)
... +...-.++|.+++||+++++++...++.. +.++
T Consensus 303 ~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i 380 (613)
T COG1022 303 KAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPI 380 (613)
T ss_pred hcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCe
Confidence 000 00111489999999999999999999987 7999
Q ss_pred EecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccc-------cccccccC
Q 027096 117 IQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMR-------ATKLTIDK 189 (228)
Q Consensus 117 ~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-------~~~~~~~~ 189 (228)
.+.||+||++++++..++. ....+++|+|+|+++++|+| .|||+||||.+|+ +|.+.++.
T Consensus 381 ~eGYGlTEts~~~~v~~~~--~~~~gtvG~p~p~~evKI~d-----------~GEilVRG~~Vm~GYyk~pe~Taeaf~~ 447 (613)
T COG1022 381 LEGYGLTETSAVVSVNPPD--RFVLGTVGKPLPGIEVKIAD-----------DGEILVRGPNVMKGYYKNPEATAEAFTE 447 (613)
T ss_pred EEEecccccccceEEcccc--CcccCCcCCcCCCceEEEcc-----------CceEEEecchhcchhcCChHHHhhhccc
Confidence 9999999999988877655 35668999999999999998 3999999999998 67888888
Q ss_pred CCeEEcCceEEEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 190 KGWVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 190 ~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
||||+|||+|.+|++|.+++.||++|+||. +|++|.|+
T Consensus 448 DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~ 486 (613)
T COG1022 448 DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPE 486 (613)
T ss_pred cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChH
Confidence 999999999999999999999999999999 99999996
No 55
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-34 Score=254.96 Aligned_cols=215 Identities=21% Similarity=0.282 Sum_probs=175.3
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++++++|++++.+|++|++++...++.++..|+++++.++++++.+++.|+++++|+++++|++++.+++.+......
T Consensus 639 ~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~ 718 (994)
T PRK07868 639 SAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHG 718 (994)
T ss_pred hhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCC
Confidence 45678899999999999999999876667777777787778899999999999999999999999999998865444455
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCc-eEEEE--------
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGV-EALIV-------- 156 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~-~~~i~-------- 156 (228)
++++|.++ |+.+++++.+++.+.++++++++.||+||++.+..... ....+++|+|++++ +++|.
T Consensus 719 ~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~----~~~~~svG~p~pg~~~v~i~~~d~~~g~ 792 (994)
T PRK07868 719 NHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANVS----GAKIGSKGRPLPGAGRVELAAYDPEHDL 792 (994)
T ss_pred CCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeecccccccccccC----CCCCcccCCccCCCCceeEEEecCcCCc
Confidence 67899766 34599999999999997789999999999876543221 23457899999997 66654
Q ss_pred ---eCCCC--CCCCCCCceEEEEecCcccccc----cccc-cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeec
Q 027096 157 ---SVDTQ--KPLPPNQLGEIWLRGPNMMRAT----KLTI-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 226 (228)
Q Consensus 157 ---d~~~~--~~~~~g~~Gel~v~~~~~~~~~----~~~~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p 226 (228)
| ++| ++++.|+.|||+++++...... ...+ ..+|||+|||+|++|+||.++++||.||+||++|.+|+|
T Consensus 793 li~d-~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p 871 (994)
T PRK07868 793 ILED-DRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYT 871 (994)
T ss_pred eeec-CCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcH
Confidence 3 445 5678899999999998654311 1123 247999999999999999999999999999999999998
Q ss_pred C
Q 027096 227 N 227 (228)
Q Consensus 227 ~ 227 (228)
+
T Consensus 872 ~ 872 (994)
T PRK07868 872 E 872 (994)
T ss_pred H
Confidence 4
No 56
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.1e-33 Score=238.39 Aligned_cols=218 Identities=25% Similarity=0.332 Sum_probs=186.6
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
+.++++++|++++.+|++|..++.. ++.++.+|+++++.+.+++..+++.++++++|++.++|+++..+.+... ....
T Consensus 195 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~ 272 (515)
T TIGR03098 195 TYLENRPDDRLLAVLPLSFDYGFNQ-LTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESA 272 (515)
T ss_pred HHhCCCcccEEEEECchhhHhHHHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCC
Confidence 4567889999999999999999876 8899999999999988999999999999999999999999999876532 2245
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
++++|.++++|+++++++.+++++.+++..+++.||+||++....... .......+++|+|+++++++++| +++++++
T Consensus 273 ~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~ 350 (515)
T TIGR03098 273 APSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPP-EEVDRRPDSIGKAIPNAEVLVLR-EDGSECA 350 (515)
T ss_pred ccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEeccc-ccccCCCCCcceecCCCEEEEEC-CCCCCCC
Confidence 678999999999999999999999998889999999999976554332 22234567899999999999999 7889999
Q ss_pred CCCceEEEEecCccccccc-------cccc-----------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATK-------LTID-----------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~-------~~~~-----------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+.|||+++|+.++..+. ..+. .++||+|||+++++++|.+++.||.||+||.+|.+|+|+
T Consensus 351 ~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 430 (515)
T TIGR03098 351 PGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPT 430 (515)
T ss_pred CCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHH
Confidence 9999999999998776321 1111 134899999999999999999999999999999999985
No 57
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.6e-33 Score=238.66 Aligned_cols=220 Identities=25% Similarity=0.360 Sum_probs=186.3
Q ss_pred cccccCCCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcC--CC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG--LV 81 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--~~ 81 (228)
.+.++++++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.+++++++++.++|+.+..+++.. ..
T Consensus 215 ~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 294 (536)
T PRK10946 215 VEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGG 294 (536)
T ss_pred HHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccC
Confidence 35678899999999999999888753 3678899999999988889999999999999999999999999998752 22
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccC-CCceEEEEeCCC
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDT 160 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~ 160 (228)
....++++|.++++|+++++++.+++.+.+ ++++++.||+||+....... .........++|+|+ +++.++++| ++
T Consensus 295 ~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~~~~~v~i~d-~~ 371 (536)
T PRK10946 295 SRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQVFGMAEGLVNYTRL-DDSDERIFTTQGRPMSPDDEVWVAD-AD 371 (536)
T ss_pred ccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEeecccccceeeecC-CCccccccccCCcccCCCceEEEEC-CC
Confidence 334568899999999999999999999988 78999999999965433222 222223456889998 789999999 78
Q ss_pred CCCCCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 161 QKPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 161 ~~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++++.|+.|||+++|+.++.. +...++.++||+|||+++++++|.+++.||.+|+||++|.+|+|.
T Consensus 372 ~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~ 445 (536)
T PRK10946 372 GNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAE 445 (536)
T ss_pred CCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHH
Confidence 8999999999999999998863 334455689999999999999999999999999999999999985
No 58
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-33 Score=236.23 Aligned_cols=218 Identities=28% Similarity=0.459 Sum_probs=185.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC--CCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VKK 83 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~ 83 (228)
+.+++++++++++.+|++|..+... .+.++..|+++++.+.+++..+++.++++++|.++.+|++++.+++... ...
T Consensus 189 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 267 (509)
T PRK12406 189 LIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQPRFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAK 267 (509)
T ss_pred hhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEccCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhccc
Confidence 4677899999999999999988766 4567889999999888899999999999999999999999999987543 233
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.+++++|.++.+|+++++++.+++.+.+ +..+++.||+||++.++...... ....++++|.|+++++++++| +++++
T Consensus 268 ~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d-~~~~~ 344 (509)
T PRK12406 268 YDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFATSED-ALSHPGTVGKAAPGAELRFVD-EDGRP 344 (509)
T ss_pred CCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecCccc-ccccCCCcCccCCCcEEEEEC-CCCCC
Confidence 4578999999999999999999999988 68899999999999866543322 223456899999999999999 77899
Q ss_pred CCCCCceEEEEecCcccc-------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMR-------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~-------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++++.++. ........++||+|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 345 ~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~ 415 (509)
T PRK12406 345 LPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPA 415 (509)
T ss_pred CCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHH
Confidence 999999999999987653 1111223678999999999999999999999999999999999884
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-33 Score=238.77 Aligned_cols=211 Identities=32% Similarity=0.566 Sum_probs=181.7
Q ss_pred cEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEE
Q 027096 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLV 92 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~ 92 (228)
+++++.+|++|.+++...++..+..|...++.. ..++..+++.++++++|.++.+|+++..+.+........++++|.+
T Consensus 259 ~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~ 338 (562)
T PRK12492 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLT 338 (562)
T ss_pred eEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEE
Confidence 577899999999998876778888898777654 4689999999999999999999999999988766566678899999
Q ss_pred EEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceEE
Q 027096 93 GSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEI 172 (228)
Q Consensus 93 ~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel 172 (228)
+++|+++++++.+++.+.+ +.++++.||+||++.++..+.... ....+.+|+|+++++++++| +++++++.|+.|||
T Consensus 339 ~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Gel 415 (562)
T PRK12492 339 NSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGE-LARLGTVGIPVPGTALKVID-DDGNELPLGERGEL 415 (562)
T ss_pred EeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcc-cccCCccceecCCCEEEEEC-CCCCCCCCCCceEE
Confidence 9999999999999999887 799999999999988765543221 23446899999999999999 68899999999999
Q ss_pred EEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 173 WLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 173 ~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++|+.++.. +...++.++||+|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 416 ~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~ 477 (562)
T PRK12492 416 CIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPN 477 (562)
T ss_pred EEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHH
Confidence 9999987762 233444578999999999999999999999999999999999985
No 60
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=7.9e-34 Score=262.77 Aligned_cols=219 Identities=17% Similarity=0.157 Sum_probs=184.2
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
...++++++|+++..+|++|..++.. ++.+|+.|+++++.+. .++..+++.++++++|+++++|++++.+....
T Consensus 448 ~~~~~~~~~d~~~~~~~~~~d~~~~~-i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~-- 524 (1389)
T TIGR03443 448 AKRFGLSENDKFTMLSGIAHDPIQRD-MFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA-- 524 (1389)
T ss_pred HHhcCCCCCCEEEEecCceecchHHH-HHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc--
Confidence 45678899999999999999988876 8899999999999864 36889999999999999999999999887542
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC---------CCCCCCccccCCCce
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVE 152 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~ 152 (228)
...++++|.++++|+++++...+++.+.+++.+++|.||+||++..+........ .....++|+|+++++
T Consensus 525 -~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 603 (1389)
T TIGR03443 525 -TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQ 603 (1389)
T ss_pred -cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCE
Confidence 2347889999999999999999999988888999999999999876654322110 112357899999999
Q ss_pred EEEEeCCC-CCCCCCCCceEEEEecCccccccc-------ccc----------------------------cCCCeEEcC
Q 027096 153 ALIVSVDT-QKPLPPNQLGEIWLRGPNMMRATK-------LTI----------------------------DKKGWVHTG 196 (228)
Q Consensus 153 ~~i~d~~~-~~~~~~g~~Gel~v~~~~~~~~~~-------~~~----------------------------~~~~~~~TG 196 (228)
+.|+|.++ +++++.|+.|||+|+|+.++..+. +.| ..++||+||
T Consensus 604 ~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TG 683 (1389)
T TIGR03443 604 LLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTG 683 (1389)
T ss_pred EEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecC
Confidence 99999533 578999999999999999887332 222 136899999
Q ss_pred ceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 197 DLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 197 D~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+|++++||.++++||.||+||++|+||+|.
T Consensus 684 Dlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~ 714 (1389)
T TIGR03443 684 DLGRYLPDGNVECCGRADDQVKIRGFRIELG 714 (1389)
T ss_pred CceeEcCCCCEEEecccCCEEEeCcEEecHH
Confidence 9999999999999999999999999999984
No 61
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8.4e-34 Score=282.36 Aligned_cols=220 Identities=20% Similarity=0.273 Sum_probs=189.1
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC---CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
....++++++|++++.+|++|+.++.. ++.+|++|+++++.+ .+++..+.+.++++++|++.++|++++.+.+...
T Consensus 687 ~~~~~~~~~~d~~l~~~p~~fd~~~~~-~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~ 765 (5163)
T PRK12316 687 MQQAYGLGVGDTVLQKTPFSFDVSVWE-FFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED 765 (5163)
T ss_pred HHHhcCCCCCCEEEeeCCeehHHHHHH-HHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc
Confidence 345688999999999999999999887 899999999999985 3789999999999999999999999999986532
Q ss_pred CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCC
Q 027096 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT 160 (228)
Q Consensus 81 ~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~ 160 (228)
...++++|.+++|||++++++.+++.+.+++.+++|.||+||++..+.............++|+|+++++++|+| ++
T Consensus 766 --~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~ 842 (5163)
T PRK12316 766 --VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-AN 842 (5163)
T ss_pred --cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-CC
Confidence 335788999999999999999999999888899999999999986544332222233456899999999999999 78
Q ss_pred CCCCCCCCceEEEEecCcccccc-------cccc------cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 161 QKPLPPNQLGEIWLRGPNMMRAT-------KLTI------DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 161 ~~~~~~g~~Gel~v~~~~~~~~~-------~~~~------~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++++.|+.|||+|+|+.++..+ .+.| +.++||+|||+|++++||.++++||.||+||++|++|+|.
T Consensus 843 ~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~ 922 (5163)
T PRK12316 843 LEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELG 922 (5163)
T ss_pred CCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChH
Confidence 89999999999999999988732 2233 2346999999999999999999999999999999999984
No 62
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-33 Score=239.33 Aligned_cols=213 Identities=38% Similarity=0.692 Sum_probs=183.4
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceE
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~ 91 (228)
.++++++++|++|.+++...++.+++.|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 327 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRA 327 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhh
Confidence 34688999999999998776778899999999998899999999999999999999999999998765555556789999
Q ss_pred EEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceE
Q 027096 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (228)
Q Consensus 92 ~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 171 (228)
++++|+++++++.+++.+.+ +.++++.||+||++.++...... .....+++|+|.+++.++++|++++++++.|+.||
T Consensus 328 v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Ge 405 (563)
T PRK06710 328 CISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGE 405 (563)
T ss_pred eeeCCCcCCHHHHHHHHHhh-CCCEecccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECCCCccCCCCCceE
Confidence 99999999999999999888 78899999999998765433221 12334689999999999999988899999999999
Q ss_pred EEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 172 IWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 172 l~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+++++.++..+ ...+ .++||+|||+++++++|.+++.||.||+||.+|.+|+|+
T Consensus 406 l~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~ 467 (563)
T PRK06710 406 IVVKGPQIMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPR 467 (563)
T ss_pred EEEecCccchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHH
Confidence 999999887522 2223 468999999999999999999999999999999999985
No 63
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7e-34 Score=279.30 Aligned_cols=220 Identities=20% Similarity=0.305 Sum_probs=189.7
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
....++++++|++++++|++|..+... ++.+|+.|+++++.+. +++..+++.|+++++|++.++|++++.+++..
T Consensus 3269 ~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~-- 3345 (3956)
T PRK12467 3269 IAEAYELDANDRVLLFMSFSFDGAQER-FLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA-- 3345 (3956)
T ss_pred HHHhcCCCcCCEEEEecCccHhHHHHH-HHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc--
Confidence 346688999999999999999998876 8999999999999875 78999999999999999999999999997753
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC---CCCCCCccccCCCceEEEEeC
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---SRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~i~d~ 158 (228)
....+++||.+++|||++++++.+++++.+++.+++|.||+||++..++....... .....++|+|++++++.|+|
T Consensus 3346 ~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d- 3424 (3956)
T PRK12467 3346 GGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD- 3424 (3956)
T ss_pred cccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-
Confidence 23457889999999999999999999998888999999999999877654332111 12346899999999999999
Q ss_pred CCCCCCCCCCceEEEEecCccccc-------ccccccC-------CCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMRA-------TKLTIDK-------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~-------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
+++++++.|+.|||+|+|+.++.. +.+.|.. ++||+|||+|++++||.++++||+||+||++|++|
T Consensus 3425 ~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rI 3504 (3956)
T PRK12467 3425 GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRI 3504 (3956)
T ss_pred CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEee
Confidence 889999999999999999998873 3334432 35799999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
.|.
T Consensus 3505 e~~ 3507 (3956)
T PRK12467 3505 ELG 3507 (3956)
T ss_pred cHH
Confidence 874
No 64
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.4e-35 Score=224.89 Aligned_cols=222 Identities=27% Similarity=0.396 Sum_probs=193.9
Q ss_pred eeecccccCCCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 2 VTMDQETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 2 ~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
.+..+..++++.+++++.+|..|-+-+.. ..+..++.|+++|+.+..+++....+|+++++|+..++|.....+++..+
T Consensus 219 ~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e 298 (542)
T COG1021 219 RASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAE 298 (542)
T ss_pred eehhhhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhh
Confidence 34567789999999999999988765543 46788999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccC-CCceEEEEeCC
Q 027096 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVD 159 (228)
Q Consensus 81 ~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~ 159 (228)
....++++||.+=+||+.+++++.+++...+ ++.+-+.+||.|- .+....-++....-..+.|+|+ |.-+++|+| +
T Consensus 299 ~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFGMAEG-LvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~ 375 (542)
T COG1021 299 WERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFGMAEG-LVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-A 375 (542)
T ss_pred cccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhhhhhh-hhcccccCCchHheeecCCCcCCCcceeEEec-C
Confidence 8889999999999999999999999999998 8999999999994 3344333333333345789998 677999999 9
Q ss_pred CCCCCCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeec
Q 027096 160 TQKPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 226 (228)
Q Consensus 160 ~~~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p 226 (228)
+|+++++||.|+|.++||+.... ....|+.+|+|+|||+++++++|++.+.||.+|+||.+|+||..
T Consensus 376 dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAA 449 (542)
T COG1021 376 DGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAA 449 (542)
T ss_pred CCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhH
Confidence 99999999999999999998773 34567889999999999999999999999999999999999974
No 65
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-33 Score=235.29 Aligned_cols=217 Identities=24% Similarity=0.344 Sum_probs=182.1
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KK 83 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~ 83 (228)
..+.++.+|++++.+|++|.+++.. .+..+..|+++++.+.+++..+++.|+++++|++.++|+++..+...... ..
T Consensus 188 ~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 266 (501)
T PRK13390 188 AFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTR 266 (501)
T ss_pred HHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhccc
Confidence 4577889999999999999998865 44567789999998889999999999999999999999999988865422 23
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
..++++|.++.+|+++++++.+.+++.+ +..+++.||+||++.++....... ....+++|+|+++ +++++| +++++
T Consensus 267 ~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g-~~~i~d-~~~~~ 342 (501)
T PRK13390 267 YDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDSPDW-LAHPGSVGRSVLG-DLHICD-DDGNE 342 (501)
T ss_pred CChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecchhh-ccCCCCcCCcccc-eEEEEC-CCCCC
Confidence 4567899999999999999999999987 678999999999987654432211 2345689999999 799999 78899
Q ss_pred CCCCCceEEEEecCccccccc-------ccc--cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRATK-------LTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~~-------~~~--~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++++.++..+. ..+ ..++|++|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 343 ~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~ 415 (501)
T PRK13390 343 LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQ 415 (501)
T ss_pred CCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHH
Confidence 999999999999998776321 122 1257999999999999999999999999999999999985
No 66
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=4.5e-33 Score=236.09 Aligned_cols=214 Identities=27% Similarity=0.408 Sum_probs=183.5
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...+++++++++++.+|++|..++.. ++.+++.|+++++.+.+++..+++.|+++++|+++++|+++..+.+.......
T Consensus 213 ~~~~~~~~~~~~l~~~pl~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 291 (542)
T PRK06155 213 AEDLEIGADDVLYTTLPLFHTNALNA-FFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESD 291 (542)
T ss_pred HHhcCCCCCCEEEEecCHHHHHHHHH-HHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcccc
Confidence 34577899999999999999999986 78999999999999889999999999999999999999999999887655555
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
...++|.++.+| +++++.+++++.+ +.++++.||+||++.++..... ....+.+|.|.++++++++| ++++++
T Consensus 292 ~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d-~~~~~~ 364 (542)
T PRK06155 292 RAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVD-EHDQEL 364 (542)
T ss_pred ccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccccCccccCCCC---CCCCCCcCccCCCceEEEEC-CCCCCC
Confidence 667888877555 6789999999988 7899999999999887654322 23457899999999999999 778999
Q ss_pred CCCCceEEEEecCc---ccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPN---MMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~---~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+++++. ++..+ ...+ .++||+|||+++++++|.+++.||.||+||++|.+|+|+
T Consensus 365 ~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~ 436 (542)
T PRK06155 365 PDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSF 436 (542)
T ss_pred CCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHH
Confidence 99999999999984 44422 2223 478999999999999999999999999999999999985
No 67
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-33 Score=237.46 Aligned_cols=218 Identities=28% Similarity=0.453 Sum_probs=182.9
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCC-
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK- 82 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~- 82 (228)
..++++++|++++.+|++|.+++...++.+++.|+++++.+ .+++..+++.++++++|.++++|+++..+.+.....
T Consensus 210 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 289 (534)
T PRK05852 210 TGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP 289 (534)
T ss_pred HHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc
Confidence 45678999999999999999999888899999999988854 478999999999999999999999999998764322
Q ss_pred -CCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCC------CCCCCCCCccccCCCceEEE
Q 027096 83 -KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF------AGSRNIGSAGALAPGVEALI 155 (228)
Q Consensus 83 -~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~------~~~~~~~~~g~p~~~~~~~i 155 (228)
....+++|.++.+|+++++++++.+.+.+ +.++++.||+||++..++..... ......+.+|. .+++++++
T Consensus 290 ~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i 367 (534)
T PRK05852 290 SGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRI 367 (534)
T ss_pred ccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEE
Confidence 24467899999999999999999999988 68899999999998766543221 01112234444 69999999
Q ss_pred EeCCCCCCCCCCCceEEEEecCccccccc-------ccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 156 VSVDTQKPLPPNQLGEIWLRGPNMMRATK-------LTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 156 ~d~~~~~~~~~g~~Gel~v~~~~~~~~~~-------~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+| +++++++.|+.|||+++|+.++..+. ..+ .++||+|||++++|+||.+++.||.||+||.+|.+|+|+
T Consensus 368 ~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~ 444 (534)
T PRK05852 368 VG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPE 444 (534)
T ss_pred EC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHH
Confidence 99 77899999999999999998876332 233 468999999999999999999999999999999999985
No 68
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-33 Score=237.54 Aligned_cols=219 Identities=27% Similarity=0.431 Sum_probs=182.3
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++++++|++++.+|++|.+|+.. ++.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+. .....
T Consensus 214 ~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~-~~~~~ 291 (540)
T PRK06164 214 ARAYGYDPGAVLLAALPFCGVFGFST-LLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDT-AGERA 291 (540)
T ss_pred HHhcCCCCCCEEEEcCCchhHHHHHH-HHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh-hcccC
Confidence 45577889999999999999999976 88999999999999889999999999999999999999999999876 23445
Q ss_pred CCCCceEEEEcc-cCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC-CCCCCCccccC-CCceEEEEeCCCC
Q 027096 85 DLSSLKLVGSGA-APLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SRNIGSAGALA-PGVEALIVSVDTQ 161 (228)
Q Consensus 85 ~~~~lr~~~~~G-~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~-~~~~~~~g~p~-~~~~~~i~d~~~~ 161 (228)
.++++|.+..+| .+...++.+++.+. ++++++.||+||++.++........ .......|.|. ++++++++|++++
T Consensus 292 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~ 369 (540)
T PRK06164 292 DFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDG 369 (540)
T ss_pred CCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCC
Confidence 678898887765 55566677766655 7889999999999887655432211 12233567765 7899999998889
Q ss_pred CCCCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 162 KPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 162 ~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++++.|+.|||+++|+.++.. +...+..++||+|||+|+++++|.+++.||.||+||++|.+|+|+
T Consensus 370 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~ 442 (540)
T PRK06164 370 ALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPA 442 (540)
T ss_pred cCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHH
Confidence 999999999999999998873 333455678999999999999999999999999999999999985
No 69
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.3e-33 Score=234.58 Aligned_cols=217 Identities=21% Similarity=0.310 Sum_probs=186.7
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..++++++|+++..+|++|..++...++.++..|+++++.++ +++..+++.|+++++|.++++|+++..+.........
T Consensus 196 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~ 275 (508)
T TIGR02262 196 NTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAE 275 (508)
T ss_pred HhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcccccc
Confidence 456889999999999999999997778889999999988764 6899999999999999999999999888766444444
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
...++|.++++|+++++++.+.|.+.+ +.++++.||+||++.+...+... ....+.+|+|+++++++++| ++++++
T Consensus 276 ~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d-~~~~~~ 351 (508)
T TIGR02262 276 DQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVG-DGGQDV 351 (508)
T ss_pred ccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEEC-CCCCCC
Confidence 567899999999999999999999988 68999999999999765543222 23456899999999999999 889999
Q ss_pred CCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+++++.++..+ ...+ .++||+|||+++++++|.+++.||.||+|+.+|.+|+|.
T Consensus 352 ~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~ 420 (508)
T TIGR02262 352 AAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPF 420 (508)
T ss_pred CCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccEEEeccccceeeeCCEEECHH
Confidence 9999999999998876532 2223 468999999999999999999999999999999999984
No 70
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3.5e-33 Score=257.21 Aligned_cols=221 Identities=18% Similarity=0.194 Sum_probs=186.5
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC---CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
..+.++++++|++++.+|++|..++.. ++.+|++|+++++.+ ..++..+++.++++++|++.++|+++..+++...
T Consensus 630 ~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~ 708 (1296)
T PRK10252 630 MQNHYPLTADDVVLQKTPCSFDVSVWE-FFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLT 708 (1296)
T ss_pred HHHhcCCCCCCEEEEeCCcchhhhHHH-HHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhc
Confidence 345688999999999999999999876 789999999999976 3589999999999999999999999998887533
Q ss_pred CCC--CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC-----CCCCCCccccCCCceE
Q 027096 81 VKK--FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-----SRNIGSAGALAPGVEA 153 (228)
Q Consensus 81 ~~~--~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~-----~~~~~~~g~p~~~~~~ 153 (228)
... ..+.++|.+++|||++++++.+++.+.+ +.+++|.||+||++.+++....... .....++|+|++++++
T Consensus 709 ~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 787 (1296)
T PRK10252 709 PEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGL 787 (1296)
T ss_pred cccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEE
Confidence 222 3457899999999999999999999877 7899999999999876654332211 1234579999999999
Q ss_pred EEEeCCCCCCCCCCCceEEEEecCcccccc-------ccccc------CCCeEEcCceEEEcCCCcEEEecccCCceeec
Q 027096 154 LIVSVDTQKPLPPNQLGEIWLRGPNMMRAT-------KLTID------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYK 220 (228)
Q Consensus 154 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~ 220 (228)
.|+| +++++++.|+.|||+|+|+.++..+ ...|. .++||+|||+|++++||.++++||.||+||++
T Consensus 788 ~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~ 866 (1296)
T PRK10252 788 RILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIR 866 (1296)
T ss_pred EEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEe
Confidence 9999 8899999999999999999887622 22221 34599999999999999999999999999999
Q ss_pred CeEeecC
Q 027096 221 GFQVTSN 227 (228)
Q Consensus 221 G~~v~p~ 227 (228)
|++|+|.
T Consensus 867 G~ri~~~ 873 (1296)
T PRK10252 867 GQRIELG 873 (1296)
T ss_pred eEEecHH
Confidence 9999874
No 71
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.4e-34 Score=244.51 Aligned_cols=220 Identities=25% Similarity=0.384 Sum_probs=176.1
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--C--CHHHHHHHHHhcCc---eEEEechHHHHHHHhc
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIEKHRV---THIWVVPPLILALAKH 78 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~ 78 (228)
..++++++|++++++|++|..|+.. ++.+++.|+++++.++ + ++..+++.++++++ +.+.++|+++..+...
T Consensus 214 ~~~~~~~~d~~l~~~Pl~h~~gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~ 292 (631)
T PRK07769 214 DALEGQEGDRGVSWLPFFHDMGLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAA 292 (631)
T ss_pred HHcCCCCcceEEEeCCCcCchhhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHh
Confidence 4567889999999999999999987 5666778999887753 4 88999999998876 7889999987766542
Q ss_pred ---CC--CCCCCCCCceEEEEcccCCCHHHHHHHHHhCC-----CCeEEecccccccCCceeeccCCCCC----------
Q 027096 79 ---GL--VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAGS---------- 138 (228)
Q Consensus 79 ---~~--~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-----~~~l~~~yG~tE~g~~~~~~~~~~~~---------- 138 (228)
+. .....++++|.+++||+++++++.+++.+.|+ ...+++.||+||++.+++........
T Consensus 293 ~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 372 (631)
T PRK07769 293 RGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDEL 372 (631)
T ss_pred hccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHH
Confidence 11 11356789999999999999999999999872 34699999999987655433211100
Q ss_pred ---------------CCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccccc-------ccccc--------
Q 027096 139 ---------------RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRAT-------KLTID-------- 188 (228)
Q Consensus 139 ---------------~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~-------- 188 (228)
....++|+|.++.+++++|.+++++++.|+.|||+++|+.++..+ .+.|.
T Consensus 373 ~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~ 452 (631)
T PRK07769 373 NAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLS 452 (631)
T ss_pred hCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccc
Confidence 012468999999999999977899999999999999999988732 22221
Q ss_pred ---------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 189 ---------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 189 ---------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.+|||+|||+|+++ +|.++++||.||+||++|+||+|.
T Consensus 453 ~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~ 499 (631)
T PRK07769 453 ESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQ 499 (631)
T ss_pred cccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHH
Confidence 24899999999994 899999999999999999999984
No 72
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.4e-33 Score=234.70 Aligned_cols=218 Identities=26% Similarity=0.376 Sum_probs=183.3
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..++++++|++++.+|++|.+++.. .+.++..|+++++.+ .+++..+++.++++++|.+..+|+.+..+.+..+....
T Consensus 212 ~~~~~~~~d~~l~~~p~~h~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~ 290 (539)
T PRK07008 212 DAMGLSARDAVLPVVPMFHVNAWGL-PYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGL 290 (539)
T ss_pred cccCCCCCceEEecCchHHhhhHHH-HHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCC
Confidence 4677889999999999999988765 678899999999874 57899999999999999999999999999887666666
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC---------CCCCCCCccccCCCceEEE
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---------GSRNIGSAGALAPGVEALI 155 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~---------~~~~~~~~g~p~~~~~~~i 155 (228)
.++++|.++++|+++++++.+++++.+ +.++++.||+||++..+....... .......+|+|++++++++
T Consensus 291 ~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i 369 (539)
T PRK07008 291 RFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKI 369 (539)
T ss_pred CcccceEEEEcCCCCCHHHHHHHHHHh-CCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEE
Confidence 788999999999999999999999988 789999999999987654332110 0112357899999999999
Q ss_pred EeCCCCCCCCCC--CceEEEEecCcccccccc----cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 156 VSVDTQKPLPPN--QLGEIWLRGPNMMRATKL----TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 156 ~d~~~~~~~~~g--~~Gel~v~~~~~~~~~~~----~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+| +++++++.+ +.|||+++|+.++..+.. .+ .+|||+|||++++++||.+++.||+||+||.+|.+|+|.
T Consensus 370 ~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~ 445 (539)
T PRK07008 370 VG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDASPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSI 445 (539)
T ss_pred EC-CCCCccCCCCCcceEEEEeCCccchhhcCChhhhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHH
Confidence 99 677777653 579999999988763322 22 368999999999999999999999999999999999984
No 73
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=6.9e-33 Score=232.93 Aligned_cols=219 Identities=18% Similarity=0.225 Sum_probs=183.9
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~ 82 (228)
..+++.++|++++..|++|..++.. ++.++..|+++++.++ .++..+++.+.+++++.+.++|+++..+.......
T Consensus 175 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~ 253 (502)
T TIGR01734 175 ADFPLSEGKQFLNQAPFSFDLSVMD-LYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFN 253 (502)
T ss_pred HhCCCCCCceEEeecCceechhHHH-HHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccc
Confidence 4577889999999999999998876 7899999999999875 47899999999999999999999998877655445
Q ss_pred CCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC---CCCCCCCccccCCCceEEEEeCC
Q 027096 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVD 159 (228)
Q Consensus 83 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~i~d~~ 159 (228)
...+++++.++++|+++++++.+++.+.+++.++++.||+||++..+....... ......++|.|.++++++++| +
T Consensus 254 ~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~ 332 (502)
T TIGR01734 254 QENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-E 332 (502)
T ss_pred cccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEEC-C
Confidence 566789999999999999999999999998999999999999876544322111 122335799999999999999 7
Q ss_pred CCCCCCCCCceEEEEecCcccccccc-------cc---cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 160 TQKPLPPNQLGEIWLRGPNMMRATKL-------TI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 160 ~~~~~~~g~~Gel~v~~~~~~~~~~~-------~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++++++.|+.|||+++|+.++..+.. .+ +.++||+|||+|+++++ .+++.||.+|+||++|.+|+|+
T Consensus 333 ~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~ 409 (502)
T TIGR01734 333 EGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELE 409 (502)
T ss_pred CCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHH
Confidence 78999999999999999988763321 11 23469999999999977 9999999999999999999985
No 74
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=7.6e-33 Score=240.71 Aligned_cols=218 Identities=17% Similarity=0.146 Sum_probs=178.8
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
.++++++|++++.+|++|+.+... ++.+|.+|+++++.++ .++..+++.++++++|++..+|++++.+.+.......+
T Consensus 391 ~~~l~~~d~~~~~~~l~w~~g~~~-v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~d 469 (728)
T PLN03052 391 HLDIRKGDIVCWPTNLGWMMGPWL-VYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLD 469 (728)
T ss_pred hcCCCCCcEEEECCCcHHHhHHHH-HHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCC
Confidence 367899999999999999999865 7899999999999875 46678999999999999999999999998765445567
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
+++||.++++|++++++...++.+.++..++.+.||+||++..+....... ....+.+|.|.++++++++| ++|++++
T Consensus 470 lssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~v~v~d-~~g~~v~ 547 (728)
T PLN03052 470 WSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQ-PQAFAAFSTPAMGCKLFILD-DSGNPYP 547 (728)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCC-CCCCCccccCCCCceEEEEC-CCCCCCC
Confidence 899999999999999999988888775567999999999986544322211 23456789999999999999 8899999
Q ss_pred CCC--ceEEEEecCcccc-----------cccccc---cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 166 PNQ--LGEIWLRGPNMMR-----------ATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~--~Gel~v~~~~~~~-----------~~~~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|+ .|||+++++.... .+...+ ..+.||+|||+++++++|.++++||+||+||++|.||+|.
T Consensus 548 ~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~ 625 (728)
T PLN03052 548 DDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSV 625 (728)
T ss_pred CCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHH
Confidence 885 5999998643211 111111 1234999999999999999999999999999999999984
No 75
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-33 Score=235.19 Aligned_cols=215 Identities=25% Similarity=0.358 Sum_probs=175.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~ 87 (228)
++...++++++.+|++|..++.. .+.+++.|+++++ ...++..+++.++++++|.++++|++++.+.+........++
T Consensus 209 ~~~~~~~~~~~~~p~~h~~~l~~-~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~ 286 (540)
T PRK05857 209 VTWVVGETTYSPLPATHIGGLWW-ILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVP 286 (540)
T ss_pred cccccCceeeecCCccccchHHH-HHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCc
Confidence 45667889999999999999986 7888999999876 456888999999999999999999999999887655566788
Q ss_pred CceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC---CCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---SRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 88 ~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
++|.++++|++++....+ +.+.+ +.++++.||+||++......+.... ....+++|+|+++++++++|.+...++
T Consensus 287 ~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~ 364 (540)
T PRK05857 287 SLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPT 364 (540)
T ss_pred cceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCcc
Confidence 999999999999988875 44566 7899999999999865443322111 123468999999999999994433333
Q ss_pred -----CCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 -----PPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 -----~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+.|||+++++.++..+ .+.+ .+|||+|||+|++|++|.+++.||.||+||++|.+|+|.
T Consensus 365 ~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~ 438 (540)
T PRK05857 365 APGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPD 438 (540)
T ss_pred ccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCceeccceEEEcCCceEEEeccccccEecCCEEECHH
Confidence 4578899999999877632 2333 478999999999999999999999999999999999985
No 76
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-33 Score=234.86 Aligned_cols=214 Identities=30% Similarity=0.519 Sum_probs=181.1
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCC
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 86 (228)
+.++.|+++..+|++|..++.. ++ .++.|++.++.+ .+++..+++.++++++|.+.++|++++.+.+.+......+
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~~~-~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 279 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGIHQ-LC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDH 279 (528)
T ss_pred CCCcccEEEEeccchhHHHHHH-HH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCC
Confidence 5678899999999999999875 44 577788777664 4789999999999999999999999999988766666678
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCC------CCCCCCCCccccCCCceEEEEeCCC
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF------AGSRNIGSAGALAPGVEALIVSVDT 160 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~------~~~~~~~~~g~p~~~~~~~i~d~~~ 160 (228)
+++|.++++|++++++..+++.+.+ +.++++.||+||++..+...... ......+++|.|+++++++++| ++
T Consensus 280 ~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~ 357 (528)
T PRK07470 280 SSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DE 357 (528)
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CC
Confidence 8999999999999999999998888 57899999999998766543211 0122446889999999999999 78
Q ss_pred CCCCCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 161 QKPLPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 161 ~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++++.|+.|||+++++.++..+ ...+ .++||+|||+++++++|++++.||.||+||++|.+|+|.
T Consensus 358 ~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~ 430 (528)
T PRK07470 358 GRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPR 430 (528)
T ss_pred CCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHH
Confidence 89999999999999999887632 2222 478999999999999999999999999999999999985
No 77
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-32 Score=231.09 Aligned_cols=216 Identities=28% Similarity=0.409 Sum_probs=181.8
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KK 83 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~ 83 (228)
..+++.+++++++.+|++|.+++.. .+.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ..
T Consensus 193 ~~~~~~~~~~~l~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 271 (511)
T PRK13391 193 RLWGFRSDMVYLSPAPLYHSAPQRA-VMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDK 271 (511)
T ss_pred HhcCCCCCCeEEEcCCHHHHHHHHH-HHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhccc
Confidence 4466788999999999999988876 67889999999999889999999999999999999999999988765322 23
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
..++++|.++.+|+++++++.+++++.+ +..+++.||+||++.++...... .....+++|+|+++ +++++| +++++
T Consensus 272 ~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d-~~~~~ 347 (511)
T PRK13391 272 YDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILD-DDGAE 347 (511)
T ss_pred CCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEecCcc-ccccCCCcCCcccc-eEEEEC-CCCCC
Confidence 4578999999999999999999999988 68899999999999876543221 12345789999999 689999 78899
Q ss_pred CCCCCceEEEEecCcccccc-------cccccC-CCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRAT-------KLTIDK-KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~-------~~~~~~-~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|+.|||+++++ .+..+ ...+.. ++||+|||+++++++|.+++.||.||++|++|.+|+|+
T Consensus 348 ~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 418 (511)
T PRK13391 348 LPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQ 418 (511)
T ss_pred CCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHH
Confidence 99999999999998 44421 222322 48999999999999999999999999999999999874
No 78
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.8e-32 Score=231.25 Aligned_cols=215 Identities=28% Similarity=0.401 Sum_probs=181.9
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCC
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~ 88 (228)
.+.++|++++.+|++|..+....++.++..|+++++.+++++..+++.++++++|.+.++|++++.+............+
T Consensus 210 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 289 (517)
T PRK08008 210 ALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHC 289 (517)
T ss_pred CCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcccccccc
Confidence 46789999999999999888877899999999999999999999999999999999999999999988765433334567
Q ss_pred ceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCC
Q 027096 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (228)
Q Consensus 89 lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~ 168 (228)
++.++++ .+++++..+.+.+.+ +.++++.||+||++..+....... .....++|.|+++++++++| +++++++.|+
T Consensus 290 l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~ 365 (517)
T PRK08008 290 LREVMFY-LNLSDQEKDAFEERF-GVRLLTSYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRD-DHNRPLPAGE 365 (517)
T ss_pred ceeeEEe-cCCCHHHHHHHHHHh-CCeEEeeccccccccccccCCccc-cccCCccccCCCCcEEEEEC-CCCCCCCCCC
Confidence 8877765 478999999999988 789999999999987655433222 23456899999999999999 7889999999
Q ss_pred ceEEEEecC---cccc-------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 169 LGEIWLRGP---NMMR-------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 169 ~Gel~v~~~---~~~~-------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|||+++|+ .++. .+.+.+..+|||+|||+++++++|.++++||.||+||++|.+|+|.
T Consensus 366 ~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 434 (517)
T PRK08008 366 IGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCV 434 (517)
T ss_pred cceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHH
Confidence 999999983 4443 2344555689999999999999999999999999999999999984
No 79
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.5e-33 Score=273.06 Aligned_cols=221 Identities=21% Similarity=0.280 Sum_probs=188.4
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
....++++++|++++.+|++|+.++.. ++.+|++|+++++.+. .++..+++.|+++++|+++++|++++.+.+...
T Consensus 1750 ~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~ 1828 (3956)
T PRK12467 1750 TQEAYQLSAADVVLQFTSFAFDVSVWE-LFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE 1828 (3956)
T ss_pred HHHhcCCCcccEEEEecCccHHHHHHH-HHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc
Confidence 345688999999999999999999877 8899999999999863 578999999999999999999999999987422
Q ss_pred CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCC---CCCCCCCCccccCCCceEEEEe
Q 027096 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF---AGSRNIGSAGALAPGVEALIVS 157 (228)
Q Consensus 81 ~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~i~d 157 (228)
....++++|.+++|||++++++.++|.+.+++.+++|.||+||++..++..... .......++|+|++++++.++|
T Consensus 1829 -~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld 1907 (3956)
T PRK12467 1829 -QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD 1907 (3956)
T ss_pred -ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC
Confidence 234578899999999999999999999988888999999999998766543221 1122346899999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCcccccc-------ccccc-------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeE
Q 027096 158 VDTQKPLPPNQLGEIWLRGPNMMRAT-------KLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 223 (228)
Q Consensus 158 ~~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~ 223 (228)
+++++++.|+.|||+|+|+.++..+ .+.|. .++||+|||++++++||.++++||.||+||++|++
T Consensus 1908 -~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~r 1986 (3956)
T PRK12467 1908 -ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFR 1986 (3956)
T ss_pred -CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEE
Confidence 8899999999999999999988732 22221 34599999999999999999999999999999999
Q ss_pred eecC
Q 027096 224 VTSN 227 (228)
Q Consensus 224 v~p~ 227 (228)
|.|.
T Consensus 1987 Iel~ 1990 (3956)
T PRK12467 1987 IELG 1990 (3956)
T ss_pred echH
Confidence 9874
No 80
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-32 Score=232.64 Aligned_cols=212 Identities=31% Similarity=0.499 Sum_probs=181.7
Q ss_pred CcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceE
Q 027096 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~ 91 (228)
...+++.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+..+|+++..+..........++++|.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 4577889999999988766778888898877765 458899999999999999999999999998876655667789999
Q ss_pred EEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceE
Q 027096 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (228)
Q Consensus 92 ~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 171 (228)
++.+|+++++.+.+++.+.+ +.++++.||+||++.++...... ......++|.|+++++++++| +++++++.|+.||
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Ge 408 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGE 408 (557)
T ss_pred EEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceE
Confidence 99999999999999999988 79999999999999876544322 223456899999999999999 7889999999999
Q ss_pred EEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 172 IWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 172 l~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+++++..+..+ ...+..+|||+|||+++++++|.+++.||.+|+||++|.+|+|.
T Consensus 409 l~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~ 471 (557)
T PRK07059 409 ICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPN 471 (557)
T ss_pred EEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHH
Confidence 999999887632 23345689999999999999999999999999999999999985
No 81
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.3e-33 Score=230.40 Aligned_cols=224 Identities=26% Similarity=0.392 Sum_probs=191.3
Q ss_pred eecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 3 TMDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 3 ~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
+....++++++|++++...+.|+.+....++.+|++|+++++.+. +++..+++.+.++++|.++..|+.++.+.....
T Consensus 271 ~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~ 350 (626)
T KOG1175|consen 271 TSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQ 350 (626)
T ss_pred hcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcc
Confidence 456789999999999999999999999988889999999999863 589999999999999999999999997766543
Q ss_pred --CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC
Q 027096 81 --VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 81 --~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
.....+++||++.++||++.++..+++.+.++..++.+.||+||+|..+..+........++..+.|++++.+.|+|
T Consensus 351 ~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d- 429 (626)
T KOG1175|consen 351 EDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD- 429 (626)
T ss_pred ccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-
Confidence 33345577999999999999999999999984447999999999999987765443245778999999999999999
Q ss_pred CCCCCCCCC-CceEEEEecCcc-cc--------c-cccc-c-cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 159 DTQKPLPPN-QLGEIWLRGPNM-MR--------A-TKLT-I-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 159 ~~~~~~~~g-~~Gel~v~~~~~-~~--------~-~~~~-~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
++|++++.+ +.|+|+++.+.. .. . .... + .-.|+|+|||.+++|+||++++.||.||+||++|++++
T Consensus 430 e~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRig 509 (626)
T KOG1175|consen 430 ENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIG 509 (626)
T ss_pred CCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeec
Confidence 789988876 889999999877 32 1 1111 1 13689999999999999999999999999999999998
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
++
T Consensus 510 ta 511 (626)
T KOG1175|consen 510 TA 511 (626)
T ss_pred HH
Confidence 74
No 82
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-32 Score=232.34 Aligned_cols=219 Identities=30% Similarity=0.432 Sum_probs=182.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~ 87 (228)
..++++|++++.+|++|.+|+...++.++++|+++++.+++++..+++.+++++++.+..+|..+..+..........++
T Consensus 246 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~ 325 (567)
T PRK06178 246 VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLS 325 (567)
T ss_pred ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcc
Confidence 56788999999999999999876688899999999999999999999999999999999999999998876555555677
Q ss_pred CceEEEEc--ccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC-----CCCCCCCccccCCCceEEEEeCCC
Q 027096 88 SLKLVGSG--AAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-----GSRNIGSAGALAPGVEALIVSVDT 160 (228)
Q Consensus 88 ~lr~~~~~--G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~-----~~~~~~~~g~p~~~~~~~i~d~~~ 160 (228)
+++.+..+ ++.+++++.+.+++.++...+.+.||+||++..+....... ......++|.|+++++++++|+++
T Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~ 405 (567)
T PRK06178 326 SLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFET 405 (567)
T ss_pred hheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCC
Confidence 88876543 58999999999999885444446899999886644322111 012345789999999999999888
Q ss_pred CCCCCCCCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 161 QKPLPPNQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 161 ~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++++.|+.|||+++|+.++..+ ...+ .+|||+|||+++++++|.++++||.||+||.+|.+|+|.
T Consensus 406 ~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ 478 (567)
T PRK06178 406 GELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPS 478 (567)
T ss_pred CCcCCCCCceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHH
Confidence 99999999999999999887632 2223 478999999999999999999999999999999999985
No 83
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8.8e-33 Score=275.15 Aligned_cols=221 Identities=19% Similarity=0.266 Sum_probs=189.6
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
....++++++|++++++|++|..+... ++.+|..|+++++.+. +++..+++.++++++|+++++|++++.+.+....
T Consensus 4726 ~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~lvi~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~ 4804 (5163)
T PRK12316 4726 TGERYELTPDDRVLQFMSFSFDGSHEG-LYHPLINGASVVIRDDSLWDPERLYAEIHEHRVTVLVFPPVYLQQLAEHAER 4804 (5163)
T ss_pred HHHhcCCCcCCeEEEecCcchhhHHHH-HHHHHhCCCEEEEcCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhcc
Confidence 345688999999999999999999876 8999999999999864 3899999999999999999999999999876533
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC---CCCCCCCccccCCCceEEEEeC
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
. ..++++|.+++|||++++++.+++.+.+++.+++|.||+||++.+++...... ......++|+|+++++++|+|
T Consensus 4805 ~-~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d- 4882 (5163)
T PRK12316 4805 D-GEPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLD- 4882 (5163)
T ss_pred c-cCCCCccEEEEecccCCHHHHHHHHHhCCCCEEEecccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEEC-
Confidence 2 26789999999999999999999988888899999999999998765543222 123456899999999999999
Q ss_pred CCCCCCCCCCceEEEEecCcccccc-------ccccc-------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMRAT-------KLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
+++++++.|+.|||+|+|+.++..+ ...|. ..+||+|||+|+++++|.++++||+||+||++|++|
T Consensus 4883 ~~~~~~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~ri 4962 (5163)
T PRK12316 4883 GQLNPLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRADGVIDYLGRVDHQVKIRGFRI 4962 (5163)
T ss_pred CCCCcCCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECCCCcEEEeccccceEeeccEee
Confidence 8899999999999999999988732 22331 246999999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
+|.
T Consensus 4963 ~~~ 4965 (5163)
T PRK12316 4963 ELG 4965 (5163)
T ss_pred cHH
Confidence 984
No 84
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-32 Score=229.92 Aligned_cols=212 Identities=29% Similarity=0.454 Sum_probs=181.9
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC--CCCCCCC
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFDLSS 88 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~ 88 (228)
..++++++.+|++|.+++.. .+.++..|+++++.+.+++..+++.++++++|++.++|+++..++..+.. ...++++
T Consensus 185 ~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 263 (502)
T PRK08276 185 GPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSS 263 (502)
T ss_pred CCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCccc
Confidence 47789999999999999877 56789999999999889999999999999999999999999999876532 2345789
Q ss_pred ceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCC
Q 027096 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (228)
Q Consensus 89 lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~ 168 (228)
+|.++++|+++++++.+++.+.+ +..+++.||+||++.++...... .....+++|+|+ +.+++++| +++++++.|+
T Consensus 264 lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~ 339 (502)
T PRK08276 264 LRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITSED-WLAHPGSVGKAV-LGEVRILD-EDGNELPPGE 339 (502)
T ss_pred ceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecCcc-ccccCCCcceec-ccEEEEEC-CCCCCCcCCC
Confidence 99999999999999999999988 67899999999999866543322 123456899999 88999999 7789999999
Q ss_pred ceEEEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 169 LGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 169 ~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.|||+++++.++.. +...+..++||+|||+++++++|.+++.||.||+||++|.+|+|+
T Consensus 340 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~ 405 (502)
T PRK08276 340 IGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQ 405 (502)
T ss_pred ceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHH
Confidence 99999999887752 233344459999999999999999999999999999999999884
No 85
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=7.6e-33 Score=240.34 Aligned_cols=216 Identities=27% Similarity=0.349 Sum_probs=167.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCC--------HHHHHHHHHhcCceEEEechHHHHHHHhcC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD--------LEMFLRAIEKHRVTHIWVVPPLILALAKHG 79 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~ 79 (228)
.+++++|++++.+|++|++++.. .+..+..|+++.+..... +..++..++.+++|++.++|.+++.+.+..
T Consensus 287 ~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~ 365 (696)
T PLN02387 287 PKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGV 365 (696)
T ss_pred CCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHH
Confidence 35788999999999999999876 455677888877644321 223566889999999999999999886431
Q ss_pred CCC---------------------------------C--------------CCCCCceEEEEcccCCCHHHHHHHHHhCC
Q 027096 80 LVK---------------------------------K--------------FDLSSLKLVGSGAAPLGKELMEECAKNVP 112 (228)
Q Consensus 80 ~~~---------------------------------~--------------~~~~~lr~~~~~G~~l~~~~~~~~~~~~~ 112 (228)
... . ....++|.+++||+++++++.+.++..+
T Consensus 366 ~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~- 444 (696)
T PLN02387 366 RKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL- 444 (696)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-
Confidence 100 0 0015899999999999999988887777
Q ss_pred CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCC-CCC--CCCCceEEEEecCccccc-------
Q 027096 113 SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ-KPL--PPNQLGEIWLRGPNMMRA------- 182 (228)
Q Consensus 113 ~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~-~~~--~~g~~Gel~v~~~~~~~~------- 182 (228)
+.++++.||+||+++.++..... ....+++|.|+++++++|+|.+++ ..+ +++..|||+|+||.++..
T Consensus 445 g~~v~~~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~ 522 (696)
T PLN02387 445 GAPIGQGYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEK 522 (696)
T ss_pred CCCeeEeechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHH
Confidence 78999999999998766554332 234578999999999999995443 322 234569999999999873
Q ss_pred ccccc--cCCC--eEEcCceEEEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 183 TKLTI--DKKG--WVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 183 ~~~~~--~~~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
+.+.+ +.+| ||+|||+|++|+||.+++.||.||+||. +|++|+|+
T Consensus 523 T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~ 572 (696)
T PLN02387 523 TDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLG 572 (696)
T ss_pred HhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchH
Confidence 33344 3345 9999999999999999999999999998 79999985
No 86
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.2e-32 Score=236.51 Aligned_cols=205 Identities=25% Similarity=0.274 Sum_probs=167.0
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCH---HHHHHHHHhcCceEEEechHHHHHHHhcCC----CCC
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDL---EMFLRAIEKHRVTHIWVVPPLILALAKHGL----VKK 83 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~----~~~ 83 (228)
.++++++++|++|..++...++.++++|+++++.+. +++ ..+++.++++++|+++++|+++..|++... ...
T Consensus 251 ~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~ 330 (614)
T PRK08180 251 EPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRR 330 (614)
T ss_pred CCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhh
Confidence 568999999999999987778899999999998763 443 467888999999999999999998876422 123
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHh----CC-CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKN----VP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~----~~-~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
..++++|.+++||+++++++.+++.+. ++ +.++++.||+||++.++...... ....+++|+|+++++++++|
T Consensus 331 ~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d- 407 (614)
T PRK08180 331 RFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVP- 407 (614)
T ss_pred hhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEec-
Confidence 456899999999999999999999875 32 36899999999998776544322 23567899999999999998
Q ss_pred CCCCCCCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEE----cCCCcEEEecccCCceee-cCeEeec
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYF----DGDGQLYVVDRIKELIKY-KGFQVTS 226 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~----~~~g~~~~~GR~~d~i~~-~G~~v~p 226 (228)
+ ++.|||+++|+.++.. +...++.+|||+|||+|++ |++|.+++.||.||+||. +|++|+|
T Consensus 408 ~-------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~ 480 (614)
T PRK08180 408 V-------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSV 480 (614)
T ss_pred C-------CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecc
Confidence 3 3459999999998863 3344556899999999999 467999999999998885 8998875
No 87
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.5e-32 Score=271.69 Aligned_cols=219 Identities=22% Similarity=0.285 Sum_probs=188.1
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC---CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
...++++++|++++.+|++|..++.. ++.+|++|+++++.+ ..++..+++.++++++|+++++|++++.+.+...
T Consensus 1306 ~~~~~~~~~d~~l~~~~~~fd~s~~~-~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~- 1383 (4334)
T PRK05691 1306 QATYALDDSDVLMQKAPISFDVSVWE-CFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL- 1383 (4334)
T ss_pred HHhcCCCCCCEEEEeCCccHHHHHHH-HHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc-
Confidence 45678999999999999999999876 889999999999985 3689999999999999999999999999976532
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCC
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 161 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~ 161 (228)
...++++|.+++|||++++++.++|.+.+++.+++|.||+||++..++............++|+|++++++.|+| +++
T Consensus 1384 -~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~ 1461 (4334)
T PRK05691 1384 -AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AEL 1461 (4334)
T ss_pred -cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCC
Confidence 345789999999999999999999999998999999999999987665432222223456899999999999999 788
Q ss_pred CCCCCCCceEEEEecCcccccc-------ccccc-------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 162 KPLPPNQLGEIWLRGPNMMRAT-------KLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 162 ~~~~~g~~Gel~v~~~~~~~~~-------~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++++.|+.|||+|+|+.++..+ .+.|. ..+||+|||++++++||.++++||+||+||++|++|.|.
T Consensus 1462 ~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~ 1541 (4334)
T PRK05691 1462 NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPE 1541 (4334)
T ss_pred CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHH
Confidence 9999999999999999988732 22231 235999999999999999999999999999999999874
No 88
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.6e-32 Score=229.98 Aligned_cols=214 Identities=38% Similarity=0.603 Sum_probs=182.3
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCce
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLK 90 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr 90 (228)
...+++++..|++|..++...++.++.+|+++++.+.+++..+++.|+++++|.+.++|+++..+.+........++++|
T Consensus 236 ~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~ 315 (541)
T TIGR03205 236 GDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLA 315 (541)
T ss_pred CCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccc
Confidence 34579999999999999888788999999999988888999999999999999999999999999876544455678899
Q ss_pred EEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC-CCCCCCCCCCc
Q 027096 91 LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQKPLPPNQL 169 (228)
Q Consensus 91 ~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~~~~~~g~~ 169 (228)
.++.+|+++++++.+++.+.+ +.++++.||+||++.++....... ....+++|.|++++.+++++. +++++++.|+.
T Consensus 316 ~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~ 393 (541)
T TIGR03205 316 TIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPPEG-PDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV 393 (541)
T ss_pred eEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCCCC-CCCCCCcceeccCceeEEEecCCCCccCCCCCe
Confidence 999999999999999998877 689999999999988765543221 233468999999999888642 66789999999
Q ss_pred eEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 170 GEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 170 Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|||+++++.++..+ .+.+ .++||+|||+++++++|.+++.||.||+||++|.+|+|+
T Consensus 394 Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~ 457 (541)
T TIGR03205 394 GELRIRGPNVTRGYWNRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQ 457 (541)
T ss_pred eEEEEecCCccccccCChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHH
Confidence 99999999877632 2233 367999999999999999999999999999999999985
No 89
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-32 Score=229.03 Aligned_cols=218 Identities=25% Similarity=0.363 Sum_probs=183.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..++++++|+++...|++|.+++.. .+.++..|+++++.. .+++..+++.++++++|.++++|++++.+.+.......
T Consensus 213 ~~~~~~~~d~~~~~~p~~h~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 291 (542)
T PRK06018 213 DALGTSAADTMLPVVPLFHANSWGI-AFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGL 291 (542)
T ss_pred hhcCCCCCCEEEEecCHHHHhhhHH-HHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCC
Confidence 4577889999999999999998876 567899999998874 57899999999999999999999999999887655556
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC---------CCCCCCccccCCCceEEE
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVEALI 155 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~~~i 155 (228)
+++++|.++++|+++++++.+++++ + +.++++.||+||++.+...+..... .....++|+|.+++++++
T Consensus 292 ~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v 369 (542)
T PRK06018 292 KLPHLKMVVCGGSAMPRSMIKAFED-M-GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKI 369 (542)
T ss_pred CcccceEEEEcCCCCCHHHHHHHHH-h-CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEE
Confidence 7789999999999999999999999 6 8999999999999987654321110 112357899999999999
Q ss_pred EeCCCCCCCCCC--CceEEEEecCccccccc----ccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 156 VSVDTQKPLPPN--QLGEIWLRGPNMMRATK----LTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 156 ~d~~~~~~~~~g--~~Gel~v~~~~~~~~~~----~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+| +++++++.+ +.|||+++++.++..+. ...+.++||+|||+++++++|.+++.||.||+||.+|.+|+|.
T Consensus 370 ~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~ 446 (542)
T PRK06018 370 TD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSI 446 (542)
T ss_pred EC-CCCCCCCCCCCceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHH
Confidence 99 677777653 67999999998876332 2334578999999999999999999999999999999999984
No 90
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.5e-33 Score=240.36 Aligned_cols=210 Identities=28% Similarity=0.409 Sum_probs=165.6
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHH-------HHHhcCceEEEechHHHHHHHhcCCC-
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLR-------AIEKHRVTHIWVVPPLILALAKHGLV- 81 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~~~~l~~~~~~- 81 (228)
.+++|++++.+|++|+++... ....+..|+++++. ++..+.+ .++++++|++.++|.+++.+.+....
T Consensus 307 ~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~ 382 (700)
T PTZ00216 307 PEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAK 382 (700)
T ss_pred CCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHH
Confidence 378899999999999998765 45567888887763 3445444 67889999999999999887542100
Q ss_pred --------------------------CC--------------CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEeccc
Q 027096 82 --------------------------KK--------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYG 121 (228)
Q Consensus 82 --------------------------~~--------------~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG 121 (228)
.. ....++|.+++||+++++++.++++..+ + ++++.||
T Consensus 383 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG 460 (700)
T PTZ00216 383 LPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWG 460 (700)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccC
Confidence 00 0015799999999999999998887776 5 8999999
Q ss_pred ccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCC-CCCCCCCceEEEEecCcccc-------cccccccCCCeE
Q 027096 122 LTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ-KPLPPNQLGEIWLRGPNMMR-------ATKLTIDKKGWV 193 (228)
Q Consensus 122 ~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~-~~~~~g~~Gel~v~~~~~~~-------~~~~~~~~~~~~ 193 (228)
+||+++........ ....+++|+|+++++++|+|.++. ...+++..|||+|+|+.++. .+.+.++.+|||
T Consensus 461 ~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~ 538 (700)
T PTZ00216 461 LTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWF 538 (700)
T ss_pred cccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCe
Confidence 99998765443322 234678999999999999994432 23455667999999999987 345556678999
Q ss_pred EcCceEEEcCCCcEEEecccCCcee-ecCeEeecC
Q 027096 194 HTGDLGYFDGDGQLYVVDRIKELIK-YKGFQVTSN 227 (228)
Q Consensus 194 ~TGD~~~~~~~g~~~~~GR~~d~i~-~~G~~v~p~ 227 (228)
+|||+|++++||.+++.||.||+|| .+|++|+|+
T Consensus 539 ~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~ 573 (700)
T PTZ00216 539 HTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALE 573 (700)
T ss_pred eccceEEEcCCCcEEEEEehHhheecCCCceeccH
Confidence 9999999999999999999999999 799999985
No 91
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=4.9e-32 Score=227.72 Aligned_cols=220 Identities=21% Similarity=0.265 Sum_probs=185.0
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
.+.+++..++++++..|++|..++.. ++.++..|+++++.+. .++..+++.+++++++.+.++|++++.+......
T Consensus 176 ~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~ 254 (503)
T PRK04813 176 LEDFALPEGPQFLNQAPYSFDLSVMD-LYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSF 254 (503)
T ss_pred HHHcCCCcCceeeecCCcchhHhHHH-HHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhcc
Confidence 35577889999999999999998876 7899999999999875 5889999999999999999999999887665444
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC---CCCCCCCccccCCCceEEEEeC
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
....++++|.++++|+++++.+.+++.+.+++..+++.||+||++..+....... ......++|+|.++++++++|
T Consensus 255 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d- 333 (503)
T PRK04813 255 NEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID- 333 (503)
T ss_pred CcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-
Confidence 5566789999999999999999999999998899999999999986554332211 122345789999999999999
Q ss_pred CCCCCCCCCCceEEEEecCcccccc-------cccc---cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMRAT-------KLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++.+++.|+.|||+++++.++..+ ...+ +..+||+|||++++ ++|.+++.||.||+||++|.+|+|.
T Consensus 334 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~ 411 (503)
T PRK04813 334 EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELE 411 (503)
T ss_pred CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHH
Confidence 8889999999999999999877622 1111 23359999999999 8999999999999999999999985
No 92
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.4e-32 Score=235.97 Aligned_cols=214 Identities=32% Similarity=0.393 Sum_probs=170.8
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC--------
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-------- 80 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-------- 80 (228)
+++++|++++.+|++|.++... .+.++..|+++++... ++..+++.|++.++|++.++|.+++.+.+...
T Consensus 262 ~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~ 339 (660)
T PLN02430 262 KMTHDDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNP 339 (660)
T ss_pred CCCCCCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCH
Confidence 5678999999999999999877 4567899999987654 78889999999999999999999987764200
Q ss_pred -----------------------CCCC--------------CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEeccccc
Q 027096 81 -----------------------VKKF--------------DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLT 123 (228)
Q Consensus 81 -----------------------~~~~--------------~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~t 123 (228)
.... ...++|.+++||+++++++.+.++. +++..+++.||+|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~-~~~~~i~~~YG~T 418 (660)
T PLN02430 340 RRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRV-TSCAFVVQGYGLT 418 (660)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHH-hcCCCeeeecchh
Confidence 0000 0157999999999999998766554 4457899999999
Q ss_pred ccCCceeeccCCCCCCCCCCccccCCCceEEEEeC-CCC-CCCCCCCceEEEEecCccccc-------ccccccCCCeEE
Q 027096 124 ETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQ-KPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVH 194 (228)
Q Consensus 124 E~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~ 194 (228)
|+++..+...... ....+++|.|.++++++++|. +.+ .+++.+..|||+|+|+.++.. +.+.+ .+|||+
T Consensus 419 E~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~ 496 (660)
T PLN02430 419 ETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFH 496 (660)
T ss_pred hhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hcccee
Confidence 9987665443221 234578999999999999873 333 455666789999999998873 33444 589999
Q ss_pred cCceEEEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 195 TGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 195 TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
|||+|++|+||.+++.||.||+||. +|++|+|+
T Consensus 497 TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~ 530 (660)
T PLN02430 497 TGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALE 530 (660)
T ss_pred ccceEEECCCCcEEEEEcccccEEcCCCcEEchH
Confidence 9999999999999999999999997 79999985
No 93
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.8e-32 Score=227.49 Aligned_cols=205 Identities=23% Similarity=0.289 Sum_probs=162.0
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 86 (228)
.+++++ ++.++++|++|.+|+.. ++.+++.|+++++.+.............+++++++++|++++.+.+. ....+
T Consensus 155 ~~~~~~-~~~~~~~Pl~h~~g~~~-~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~---~~~~l 229 (452)
T PRK07445 155 YFQLQQ-VNSFCVLPLYHVSGLMQ-FMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQL---RPQWL 229 (452)
T ss_pred HhcCCC-CceEeccCchhhhhHHH-HHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhh---Chhhh
Confidence 345554 46788999999999976 78899999999988643222223334578899999999999998763 22346
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCC
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 166 (228)
+++|.+++||+++++++.+++.+ + +.++++.||+||++..+.............++|+|+++++++++ .
T Consensus 230 ~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~ 298 (452)
T PRK07445 230 AQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------A 298 (452)
T ss_pred hcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------C
Confidence 78999999999999999998876 3 78999999999998655433222212234678999999999987 3
Q ss_pred CCceEEEEecCcccccccccc-cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 167 NQLGEIWLRGPNMMRATKLTI-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 167 g~~Gel~v~~~~~~~~~~~~~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+.|||+|+++.++..+.... ..++||+|||++++|+||++++.||.||+||++|+||+|+
T Consensus 299 g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~ 360 (452)
T PRK07445 299 NQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPA 360 (452)
T ss_pred CCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHH
Confidence 567999999999887554332 3568999999999999999999999999999999999985
No 94
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-32 Score=227.73 Aligned_cols=211 Identities=32% Similarity=0.451 Sum_probs=178.8
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhc-------------
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKH------------- 78 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~------------- 78 (228)
..|++++.+|+.|++.-.. -...++.|+++.+..+ |+..+.+.|++.++|.+.++|.+++++-+.
T Consensus 301 ~~dv~lSyLPLAHi~er~~-~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr 378 (691)
T KOG1256|consen 301 GDDVYLSYLPLAHIFERVV-ELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKR 378 (691)
T ss_pred cCceEEEeCcHHHHHHHHH-HHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHH
Confidence 3699999999999999988 4566788999999875 888888889999999999999998866531
Q ss_pred ----------C-------CCC-CC--------------CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccC
Q 027096 79 ----------G-------LVK-KF--------------DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETS 126 (228)
Q Consensus 79 ----------~-------~~~-~~--------------~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g 126 (228)
. ... .. .-.++|.+++|++|+++++...++..+ ++++.+.||+||+.
T Consensus 379 ~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts 457 (691)
T KOG1256|consen 379 KLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETS 457 (691)
T ss_pred HHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccC
Confidence 0 000 00 014789999999999999999999987 79999999999998
Q ss_pred CceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccc-------cccccccCCCeEEcCceE
Q 027096 127 GIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMR-------ATKLTIDKKGWVHTGDLG 199 (228)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-------~~~~~~~~~~~~~TGD~~ 199 (228)
+.+....... ...+++|.|+|+++++++|+++-+.-..+..|||||||+.++. .|.+.++.|||++|||+|
T Consensus 458 ~g~~~~~~~d--~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG 535 (691)
T KOG1256|consen 458 AGTTLTLPGD--NVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIG 535 (691)
T ss_pred CceEeccCCC--CCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccce
Confidence 5444433322 2678999999999999999877777777778999999999997 678888999999999999
Q ss_pred EEcCCCcEEEecccCCceee-cCeEeecC
Q 027096 200 YFDGDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 200 ~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
+++++|.+++.||.++++|. +|+.|.|+
T Consensus 536 ~~~p~G~l~IidRkK~ifklaqGEyVaPe 564 (691)
T KOG1256|consen 536 EWDPNGTLKIIDRKKNIFKLAQGEYVAPE 564 (691)
T ss_pred eECCCccEEEEecccceEEcCCCCccChH
Confidence 99999999999999999999 99999985
No 95
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.3e-32 Score=233.38 Aligned_cols=217 Identities=17% Similarity=0.134 Sum_probs=176.1
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC-
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~- 80 (228)
..++++++|++++.++++|+.+. .++.+|+.|+++++.++ +++..+++.++++++|++..+|++++.+.+...
T Consensus 298 ~~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 298 LHCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred HhcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 45788999999999999998553 26689999999999753 479999999999999999999999998876432
Q ss_pred -CCCCCCCCceEEEEcccCCCHHHHHHHHHhC-CCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC
Q 027096 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNV-PSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 81 -~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~-~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
....++++||.++++|+++++++.+++.+.+ ++..+.+.||+||++.......... ....+.+|.|.++++++++|
T Consensus 376 ~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~~~ivd- 453 (655)
T PRK03584 376 PGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLL-PVYRGEIQCRGLGMAVEAWD- 453 (655)
T ss_pred ccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCC-CcCCCccCCCcCCceeEEEC-
Confidence 2335678999999999999999999999988 4688999999999865433221111 23456789999999999999
Q ss_pred CCCCCCCCCCceEEEEecCc--ccccccc-----c-----c-cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 159 DTQKPLPPNQLGEIWLRGPN--MMRATKL-----T-----I-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~--~~~~~~~-----~-----~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
++++++ .|+.|||+|+++. ++..+.. . + ..++||+|||++++|+||.++++||+||+||++|++|+
T Consensus 454 ~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~ 532 (655)
T PRK03584 454 EDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIG 532 (655)
T ss_pred CCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEEC
Confidence 788888 7999999999974 3331111 1 1 12578999999999999999999999999999999999
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
|.
T Consensus 533 p~ 534 (655)
T PRK03584 533 TA 534 (655)
T ss_pred HH
Confidence 84
No 96
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=6e-32 Score=230.14 Aligned_cols=212 Identities=32% Similarity=0.512 Sum_probs=179.4
Q ss_pred CcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceE
Q 027096 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~ 91 (228)
++++++.+|++|.+++....+.++..|++.++. +.+++..+++.++++++|.+..+|+++..+.+.....+..++++|.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 333 (560)
T PRK08751 254 CEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKM 333 (560)
T ss_pred CceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhhee
Confidence 357788899999999876556677777776665 4578999999999999999999999999998876555566789999
Q ss_pred EEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceE
Q 027096 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (228)
Q Consensus 92 ~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 171 (228)
+++||+++++.+.+.+++.+ +..+++.||+||++..+..+... .....+++|.|+++++++++| +++++++.|+.||
T Consensus 334 v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Ge 410 (560)
T PRK08751 334 TLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLT-LKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGE 410 (560)
T ss_pred eeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceeccccc-ccccCCCcCccCCCceEEEEC-CCCCCCCCCCceE
Confidence 99999999999999999987 68899999999998876554322 123456899999999999999 7889999999999
Q ss_pred EEEecCccccc-------ccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 172 IWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 172 l~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|+++++.++.. +...+..+|||+|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 411 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~ 473 (560)
T PRK08751 411 LCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPN 473 (560)
T ss_pred EEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHH
Confidence 99999987762 233444578999999999999999999999999999999999984
No 97
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-32 Score=236.28 Aligned_cols=218 Identities=27% Similarity=0.401 Sum_probs=168.1
Q ss_pred ccc-CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC--C--CHHHHHHHHH--hcCceEEEechHHHHHHHhcC
Q 027096 7 ETA-GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIE--KHRVTHIWVVPPLILALAKHG 79 (228)
Q Consensus 7 ~~~-~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~ 79 (228)
.++ ++++|++++++|++|..|+...++.++ .|++.++..+ + ++..+++.++ +++++.++.+|+++..++...
T Consensus 228 ~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~-~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~ 306 (612)
T PRK12476 228 SIDLLDRNTHGVSWLPLYHDMGLSMIGFPAV-YGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQR 306 (612)
T ss_pred HhccCCCCceEEEeCCcccccchHHHHHHHh-cCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHh
Confidence 355 688899999999999999987444445 4555544432 3 7889999995 588999999999888776642
Q ss_pred C----CCCCCCCCceEEEEcccCCCHHHHHHHHHhCC-----CCeEEecccccccCCceeeccCCCC-------------
Q 027096 80 L----VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAG------------- 137 (228)
Q Consensus 80 ~----~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-----~~~l~~~yG~tE~g~~~~~~~~~~~------------- 137 (228)
. .....++++| ++++|+++++++.+++.+.|+ ...+++.||+||++..+........
T Consensus 307 ~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (612)
T PRK12476 307 GLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGA 385 (612)
T ss_pred cChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhC
Confidence 1 1234578899 999999999999999999772 3469999999998765433211100
Q ss_pred ------------CCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccccc-------ccccc----------
Q 027096 138 ------------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRAT-------KLTID---------- 188 (228)
Q Consensus 138 ------------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~---------- 188 (228)
.....++|+|+++++++|+|.+++++++.|+.|||+++|+.++..+ ...|.
T Consensus 386 g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g 465 (612)
T PRK12476 386 GRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEG 465 (612)
T ss_pred CCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccc
Confidence 0012478999999999999955599999999999999999988632 22221
Q ss_pred --------CCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 189 --------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 189 --------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.++||+|||+|++ ++|.++++||+||+||++|++|+|.
T Consensus 466 ~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~ 511 (612)
T PRK12476 466 SHADGAADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQ 511 (612)
T ss_pred cccccccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHH
Confidence 2359999999998 5999999999999999999999985
No 98
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-31 Score=225.15 Aligned_cols=213 Identities=24% Similarity=0.323 Sum_probs=175.8
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++++++|++++.+|++|..++...++.++..|+++++.+.+++..+++.++++++|++.++|+.+..++...+....
T Consensus 185 ~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~ 264 (529)
T PRK07867 185 AQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDD 264 (529)
T ss_pred HHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccc
Confidence 45678899999999999999999988778899999999999889999999999999999999999999988876543333
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
...++|. ++||+.+++.. +++.+.+ +.++++.||+||++......+ ....+++|.|.++ ++++|+++++++
T Consensus 265 ~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~~----~~~~~~~g~~~~~--~~i~~~~~~~~~ 335 (529)
T PRK07867 265 ADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRTP----DTPPGALGPLPPG--VAIVDPDTGTEC 335 (529)
T ss_pred cccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccCC----CCCCCCcCCCCCC--EEEEECCCCCCC
Confidence 3456774 56888887764 6777777 789999999999986554322 1234678999998 677887788889
Q ss_pred CCCC------------ceEEEE-ecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 165 PPNQ------------LGEIWL-RGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 165 ~~g~------------~Gel~v-~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
+.|+ .|||++ +++.++..+ ...+ .+|||+|||+++++++|.+++.||.||+||++|.+|
T Consensus 336 ~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v 414 (529)
T PRK07867 336 PPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENL 414 (529)
T ss_pred CCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEe
Confidence 8888 899998 998877632 2223 478999999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
+|.
T Consensus 415 ~p~ 417 (529)
T PRK07867 415 GTA 417 (529)
T ss_pred CHH
Confidence 985
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-31 Score=226.45 Aligned_cols=213 Identities=32% Similarity=0.517 Sum_probs=181.9
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCc
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l 89 (228)
...++++..+|++|.+++...++.++..|+++++.. ..++..+++.++++++|.+.++|++++.+.+........++++
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 327 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSL 327 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccce
Confidence 456788899999999998766777888999877764 5688899999999999999999999999988765555667899
Q ss_pred eEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCc
Q 027096 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQL 169 (228)
Q Consensus 90 r~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~ 169 (228)
|.++.+|+++++.+.++|++.+ +.++++.||+||++.++..+.... ....+++|.|+++++++++| +++++++.|+.
T Consensus 328 r~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~ 404 (560)
T PRK08974 328 KLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDL-DYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEP 404 (560)
T ss_pred eEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCC-cccCCccccCcCCCEEEEEC-CCCCCCCCCCc
Confidence 9999999999999999999987 789999999999998766554322 23456899999999999999 67899999999
Q ss_pred eEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 170 GEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 170 Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|||+++++.++..+ ...+ .++||+|||+++++++|.++++||.||+|+++|.+|+|.
T Consensus 405 Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ 468 (560)
T PRK08974 405 GELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPN 468 (560)
T ss_pred eEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHH
Confidence 99999999877522 2223 478999999999999999999999999999999999884
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.6e-31 Score=242.30 Aligned_cols=213 Identities=23% Similarity=0.390 Sum_probs=179.9
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
.+.++.+++|++++.+|++|..++...++.++..|+++++.+. .+...+.+.++++++|+++.+|++++.+.+.. ..
T Consensus 826 ~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~ 903 (1140)
T PRK06814 826 AARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HP 903 (1140)
T ss_pred HHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--cc
Confidence 3457889999999999999999997668899999999998764 56778899999999999999999999887653 34
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
.+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++.++...... ....+++|+|.+++++++++ ..+
T Consensus 904 ~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~-~~~-- 977 (1140)
T PRK06814 904 YDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEP-VPG-- 977 (1140)
T ss_pred ccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEee-cCC--
Confidence 5578999999999999999999999988 78999999999998876544322 23456899999999999987 332
Q ss_pred CCCCCceEEEEecCccccccccc-------ccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRATKLT-------IDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~~~~-------~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.++.|||+++|+.++..+... ...+|||+|||++++|+||.+++.||.||+||++|++|+|.
T Consensus 978 --~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~ 1046 (1140)
T PRK06814 978 --IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLA 1046 (1140)
T ss_pred --CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHH
Confidence 357799999999987743221 12478999999999999999999999999999999999984
No 101
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-31 Score=265.36 Aligned_cols=218 Identities=18% Similarity=0.214 Sum_probs=188.0
Q ss_pred ecccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC
Q 027096 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 80 (228)
....+++++.|+++..+|++|+.++.. ++.+|+.|+++++++. .++..+.+.++++++|++.++|++++.++..
T Consensus 3901 ~~~~~~~~~~~~~~~~~s~~fd~s~~~-~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~-- 3977 (4334)
T PRK05691 3901 KVPYLALSEADVIAQTASQSFDISVWQ-FLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAE-- 3977 (4334)
T ss_pred HHHhcCCCccceEEEecCCchhHHHHH-HHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhh--
Confidence 345688999999999999999999988 8999999999999864 5789999999999999999999999988754
Q ss_pred CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC--CCCCCCccccCCCceEEEEeC
Q 027096 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG--SRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 81 ~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~--~~~~~~~g~p~~~~~~~i~d~ 158 (228)
....+++||.+++|||++++++.++|.+.+++++++|.||+||++..++....... .....++|+|++++++.++|
T Consensus 3978 -~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d- 4055 (4334)
T PRK05691 3978 -DRQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD- 4055 (4334)
T ss_pred -ccccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-
Confidence 22346789999999999999999999998889999999999999887654332211 12335799999999999999
Q ss_pred CCCCCCCCCCceEEEEecCccccc-------ccccc-------cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMRA-------TKLTI-------DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~~-------~~~~~-------~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
+.+++++.|..|||+|+|+.++.. +.+.| ..++||+|||++++++||.++++||.|++||++|++|
T Consensus 4056 ~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~ri 4135 (4334)
T PRK05691 4056 EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRI 4135 (4334)
T ss_pred CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEe
Confidence 889999999999999999999862 33333 2357999999999999999999999999999999999
Q ss_pred ec
Q 027096 225 TS 226 (228)
Q Consensus 225 ~p 226 (228)
.+
T Consensus 4136 el 4137 (4334)
T PRK05691 4136 EL 4137 (4334)
T ss_pred cH
Confidence 86
No 102
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.4e-32 Score=231.77 Aligned_cols=205 Identities=25% Similarity=0.272 Sum_probs=165.3
Q ss_pred CcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCH---HHHHHHHHhcCceEEEechHHHHHHHhcCCCC----CC
Q 027096 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDL---EMFLRAIEKHRVTHIWVVPPLILALAKHGLVK----KF 84 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~ 84 (228)
.+++++++|++|.+++...++.++..|+++++.+. +++ ..+++.++++++|+++++|++++.|.+..... ..
T Consensus 264 ~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 343 (624)
T PRK12582 264 PPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRS 343 (624)
T ss_pred CceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHH
Confidence 58999999999999988777889999999998763 333 45677788999999999999999887543221 23
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhC----C-CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNV----P-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 159 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~----~-~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~ 159 (228)
.+++||.+++||+++++++.+++.+.+ + +.++++.||+||++.++...... ....+++|+|++++++++++
T Consensus 344 ~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~-- 419 (624)
T PRK12582 344 FFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP-- 419 (624)
T ss_pred HhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc--
Confidence 467899999999999999999998863 2 36899999999998766532211 24467899999999999864
Q ss_pred CCCCCCCCCceEEEEecCccccc-------ccccccCCCeEEcCceEEE-c---CCCcEEEecccCCceee-cCeEeecC
Q 027096 160 TQKPLPPNQLGEIWLRGPNMMRA-------TKLTIDKKGWVHTGDLGYF-D---GDGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 160 ~~~~~~~g~~Gel~v~~~~~~~~-------~~~~~~~~~~~~TGD~~~~-~---~~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
.|+.|||+|+|+.++.. +.+.++.+|||+|||+|++ | ++|.+++.||.||+||. +|++|+|.
T Consensus 420 ------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~ 493 (624)
T PRK12582 420 ------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVG 493 (624)
T ss_pred ------CCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechH
Confidence 47789999999988863 3345556899999999998 4 46899999999999996 89999974
No 103
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.9e-31 Score=225.85 Aligned_cols=218 Identities=24% Similarity=0.356 Sum_probs=179.1
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
..++++++|++++.+|++|.+++.. ++.++..|+++++.+ .+++..+++.+++++++.++.+|+++..++........
T Consensus 217 ~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 295 (576)
T PRK05620 217 DSLAVTHGESFLCCVPIYHVLSWGV-PLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPP 295 (576)
T ss_pred hhcCCCCCCeEEEeCChHHhhhhHH-HHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCc
Confidence 3577889999999999999999876 788899999998875 57999999999999999999999999988765332333
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC------CCCCCCccccCCCceEEEEeC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG------SRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~------~~~~~~~g~p~~~~~~~i~d~ 158 (228)
...++|.++.+|+++++++.+++.+.+ +.++++.||+||++.++........ ......+|++.++++++++|
T Consensus 296 ~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~- 373 (576)
T PRK05620 296 ERMSLQEIYVGGSAVPPILIKAWEERY-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN- 373 (576)
T ss_pred ccCceeEEEEcCCCCCHHHHHHHHHHh-CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-
Confidence 345799999999999999999999988 6899999999999887654322110 11224688999999999999
Q ss_pred CCCCCCC--CCCceEEEEecCccccccc-----------------------ccccCCCeEEcCceEEEcCCCcEEEeccc
Q 027096 159 DTQKPLP--PNQLGEIWLRGPNMMRATK-----------------------LTIDKKGWVHTGDLGYFDGDGQLYVVDRI 213 (228)
Q Consensus 159 ~~~~~~~--~g~~Gel~v~~~~~~~~~~-----------------------~~~~~~~~~~TGD~~~~~~~g~~~~~GR~ 213 (228)
+ +++++ .++.|||+++|+.++..+. ..+..++||+|||++++++||.+++.||.
T Consensus 374 ~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~ 452 (576)
T PRK05620 374 D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRA 452 (576)
T ss_pred C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEech
Confidence 5 66554 4688999999998776321 11335789999999999999999999999
Q ss_pred CCceeecCeEeecC
Q 027096 214 KELIKYKGFQVTSN 227 (228)
Q Consensus 214 ~d~i~~~G~~v~p~ 227 (228)
||+||.+|.+|+|.
T Consensus 453 ~d~i~~~G~~i~~~ 466 (576)
T PRK05620 453 RDVIRSGGEWIYSA 466 (576)
T ss_pred hhhhhcCCEEEcHH
Confidence 99999999999984
No 104
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.98 E-value=3.5e-31 Score=228.75 Aligned_cols=217 Identities=17% Similarity=0.137 Sum_probs=171.0
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC-
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~- 80 (228)
..++++++|++++.+|++|+.+. . ++.+|+.|+++++.++ .++..+++.++++++|++..+|++++.+.....
T Consensus 299 ~~~~~~~~d~~~~~~~~~~~~~~-~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~ 376 (652)
T TIGR01217 299 LHCDLGPGDRLFYYTTTGWMMWN-W-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVH 376 (652)
T ss_pred hccCCCCCcEEEEeCCcchhhhH-H-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCC
Confidence 35788999999999999998542 2 5689999999999853 378899999999999999888887776654321
Q ss_pred -CCCCCCCCceEEEEcccCCCHHHHHHHHHhCC-CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC
Q 027096 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 81 -~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
....++++||.++++|+++++++.+++.+.++ +..+.+.||+||++.......... ....+.+|.|.++++++++|
T Consensus 377 ~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~v~ivd- 454 (652)
T TIGR01217 377 PARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTL-PVHIGEIQAPGLGTAVQSWD- 454 (652)
T ss_pred ccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCC-CCcCCccCCCcCCCceEEEC-
Confidence 23456889999999999999999999999874 356789999999754332221111 22346788999999999999
Q ss_pred CCCCCCCCCCceEEEEecCc--ccccccc---------c-c-cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 159 DTQKPLPPNQLGEIWLRGPN--MMRATKL---------T-I-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~--~~~~~~~---------~-~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
++|+++ .|+.|||++++|. ++..+.. . + ..+|||+|||+|++|+||.++++||+||+||++|+||+
T Consensus 455 ~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~ 533 (652)
T TIGR01217 455 PEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMG 533 (652)
T ss_pred CCCCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcC
Confidence 788888 5999999999974 3331110 1 1 12689999999999999999999999999999999999
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
|.
T Consensus 534 p~ 535 (652)
T TIGR01217 534 SA 535 (652)
T ss_pred HH
Confidence 84
No 105
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.98 E-value=6.7e-31 Score=222.76 Aligned_cols=214 Identities=21% Similarity=0.280 Sum_probs=171.9
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++++++|++++.+|++|..++...++.+|..|+++++.+.+++..+++.+++++++++..+|+.+..+...+.....
T Consensus 183 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~ 262 (540)
T PRK13388 183 TERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDD 262 (540)
T ss_pred HHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccc
Confidence 45678999999999999999999887667789999999998888999999999999999999999999988876543323
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEE----------
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEAL---------- 154 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~---------- 154 (228)
...+++.+ .|++++++..+++.+.+ +.++++.||+||++.++.... ....+++|+|++++++.
T Consensus 263 ~~~~l~~~--~G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~----~~~~~~vG~p~~g~~i~~~~~~~~~~~ 335 (540)
T PRK13388 263 ADNPLRVA--FGNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVREP----GTPPGSIGRGAPGVAIYNPETLTECAV 335 (540)
T ss_pred cccceEEE--ECCCCCHHHHHHHHHHh-CCceecccccccccceeecCC----CCCCCCCCCCCCCcEEEcCCCCccccc
Confidence 33456643 36677888999999888 689999999999987665432 12346899999997652
Q ss_pred -EEeCCCCCCC-CCCCceEEEEe-cCccccccc-------ccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEe
Q 027096 155 -IVSVDTQKPL-PPNQLGEIWLR-GPNMMRATK-------LTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 224 (228)
Q Consensus 155 -i~d~~~~~~~-~~g~~Gel~v~-~~~~~~~~~-------~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 224 (228)
++| ++|+++ +.++.|||+++ |+.++..+. ..+ .+|||+|||+++++++|.++++||.||+||++|.+|
T Consensus 336 ~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v 413 (540)
T PRK13388 336 ARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENL 413 (540)
T ss_pred eecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccCCceEEECCEEe
Confidence 334 445554 34678999998 888776332 223 368999999999999999999999999999999999
Q ss_pred ecC
Q 027096 225 TSN 227 (228)
Q Consensus 225 ~p~ 227 (228)
+|.
T Consensus 414 ~p~ 416 (540)
T PRK13388 414 SAA 416 (540)
T ss_pred CHH
Confidence 984
No 106
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.97 E-value=1e-30 Score=216.08 Aligned_cols=207 Identities=29% Similarity=0.464 Sum_probs=170.3
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++++++|++++.+|++|.+++.. ++.++..|+++++.+.+ ..+++.++++++|++.++|+++..+++.....
T Consensus 144 ~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-- 218 (436)
T TIGR01923 144 KENLGFTEDDNWLLSLPLYHISGLSI-LFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-- 218 (436)
T ss_pred HhhcCCCCCceEEEccCcHhHHHHHH-HHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC--
Confidence 45678899999999999999999875 88999999999998755 38999999999999999999999998864322
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
.++|.++++|+++++++.+++++. +..+++.||+||++..+............ .+|.|++++++++.+.+.
T Consensus 219 --~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~~~~~i~~~~~---- 289 (436)
T TIGR01923 219 --ENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARP-DVGRPLAGREIKIKVDNK---- 289 (436)
T ss_pred --CceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCcccccccc-CCCccCCCcEEEEEeCCC----
Confidence 689999999999999999988764 78999999999998876544333222222 489999999999844122
Q ss_pred CCCCceEEEEecCcccccccc------cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKL------TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~------~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++.|||+++++.++..+.. ....++||+|||++++++||.+++.||.||+||++|.+|+|.
T Consensus 290 --~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~ 356 (436)
T TIGR01923 290 --EGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPE 356 (436)
T ss_pred --CCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHH
Confidence 2679999999887752211 122468999999999999999999999999999999999874
No 107
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.4e-30 Score=212.74 Aligned_cols=194 Identities=20% Similarity=0.278 Sum_probs=167.0
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
.+.++...+|+++..+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.++++|+.+..+.+....
T Consensus 134 ~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--- 210 (414)
T PRK08308 134 NEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG--- 210 (414)
T ss_pred HHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc---
Confidence 34577888999999999999999877789999999999999889999999999999999999999999999876432
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
..+++.++.+|+++++++.+++++. ..++++.||+||++++..... ......+|+|++++++++.+ +
T Consensus 211 -~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~----~~~~~~~G~p~~~~~~~~~~-~----- 277 (414)
T PRK08308 211 -TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICPD----MKSHLDLGNPLPHVSVSAGS-D----- 277 (414)
T ss_pred -cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecCC----CCCCCccCccCCCeEEEEec-C-----
Confidence 1368899999999999999999987 468999999999987554221 22346799999999998875 2
Q ss_pred CCCCceEEEEecCcccccccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.++.|||++++ .++||+|||+++++++|.++++||.||+||++|.+|+|.
T Consensus 278 -~~~~gel~v~~------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~ 327 (414)
T PRK08308 278 -ENAPEEIVVKM------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPI 327 (414)
T ss_pred -CCCCceEEEEc------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHH
Confidence 35679999975 367999999999999999999999999999999999984
No 108
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=1.6e-30 Score=220.75 Aligned_cols=221 Identities=26% Similarity=0.418 Sum_probs=176.5
Q ss_pred ccccCCCC-cEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcC-
Q 027096 6 QETAGELD-YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHG- 79 (228)
Q Consensus 6 ~~~~~~~~-d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~- 79 (228)
..+++.++ |++++++|++|..++...++.++..|+++++.+. .++..+.+.+++++++.+..+|..+..+....
T Consensus 186 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 265 (545)
T PRK07768 186 VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLR 265 (545)
T ss_pred HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHh
Confidence 34566766 8999999999999998777788999999988764 26788899999999999887777766554421
Q ss_pred ---CCCCCCCCCceEEEEcccCCCHHHHHHHHHh---C--CCCeEEecccccccCCceeeccCCC---------------
Q 027096 80 ---LVKKFDLSSLKLVGSGAAPLGKELMEECAKN---V--PSATVIQGYGLTETSGIATMENSFA--------------- 136 (228)
Q Consensus 80 ---~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~---~--~~~~l~~~yG~tE~g~~~~~~~~~~--------------- 136 (228)
.....+++++|.++.+|+++++++.+++.+. + +...+++.||+||++..+.......
T Consensus 266 ~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (545)
T PRK07768 266 RQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAAL 345 (545)
T ss_pred ccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhcc
Confidence 1223567899999999999999999998874 4 2235999999999987654332110
Q ss_pred ---------CCCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccccc------cccccCCCeEEcCceEEE
Q 027096 137 ---------GSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRAT------KLTIDKKGWVHTGDLGYF 201 (228)
Q Consensus 137 ---------~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~------~~~~~~~~~~~TGD~~~~ 201 (228)
.......+|+|+++++++++| +++++++.|+.|||+++++.++..+ ......++||+|||++++
T Consensus 346 ~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~ 424 (545)
T PRK07768 346 RRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYL 424 (545)
T ss_pred CceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEE
Confidence 011335789999999999999 8889999999999999998877632 222235689999999999
Q ss_pred cCCCcEEEecccCCceeecCeEeecC
Q 027096 202 DGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 202 ~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+++|.++++||.||+||.+|.+|+|.
T Consensus 425 ~~~g~l~~~GR~~d~i~~~G~~v~~~ 450 (545)
T PRK07768 425 TEEGEVVVCGRVKDVIIMAGRNIYPT 450 (545)
T ss_pred ecCCEEEEEccccceEEECCEecCHH
Confidence 99999999999999999999999985
No 109
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.97 E-value=5.1e-30 Score=218.97 Aligned_cols=214 Identities=27% Similarity=0.406 Sum_probs=167.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~ 87 (228)
+.+...++++..+|++|..++.. .+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+..........
T Consensus 222 ~~~~~~~~~l~~~pl~h~~g~~~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 300 (579)
T PLN03102 222 WEMGTCPVYLWTLPMFHCNGWTF-TWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRS 300 (579)
T ss_pred cCCCCCCeEEecCChhhhcchhH-HHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcc
Confidence 44567789999999999999876 67788899999988888999999999999999999999999999876543334456
Q ss_pred CceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC------------CCCCCCccccCCCceEEE
Q 027096 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG------------SRNIGSAGALAPGVEALI 155 (228)
Q Consensus 88 ~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~------------~~~~~~~g~p~~~~~~~i 155 (228)
+++.++++|+++++++.+++.+ + +.++++.||+||+++.+........ ....+..+.+.+ .+.+
T Consensus 301 ~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i 376 (579)
T PLN03102 301 GPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDV 376 (579)
T ss_pred cceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEE
Confidence 7888999999999999999876 5 6899999999999865443211100 001122223333 4556
Q ss_pred EeCCCCCCCCC--CCceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeec
Q 027096 156 VSVDTQKPLPP--NQLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 226 (228)
Q Consensus 156 ~d~~~~~~~~~--g~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p 226 (228)
++.+.+++++. ++.|||+++|+.++..+ ...+ .+|||+|||+|++|++|.+++.||.||+||++|.+|+|
T Consensus 377 ~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p 455 (579)
T PLN03102 377 KNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISS 455 (579)
T ss_pred eccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECH
Confidence 66566677764 36799999999888733 2233 47899999999999999999999999999999999998
Q ss_pred C
Q 027096 227 N 227 (228)
Q Consensus 227 ~ 227 (228)
.
T Consensus 456 ~ 456 (579)
T PLN03102 456 V 456 (579)
T ss_pred H
Confidence 4
No 110
>PLN02479 acetate-CoA ligase
Probab=99.97 E-value=4.9e-30 Score=218.69 Aligned_cols=218 Identities=26% Similarity=0.354 Sum_probs=171.8
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC-C
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK-F 84 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~ 84 (228)
..++++++|++++.+|++|..++...+..+++.|.++++ ..+++..+++.++++++|+++.+|+++..+.+...... .
T Consensus 229 ~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 307 (567)
T PLN02479 229 LIWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETIL 307 (567)
T ss_pred hhcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccc
Confidence 356788899999999999999987644456666666554 56899999999999999999999999999987643332 2
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCC---------CCCCCCCCccccCCCce-EE
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF---------AGSRNIGSAGALAPGVE-AL 154 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~---------~~~~~~~~~g~p~~~~~-~~ 154 (228)
.+++++.++++|+++++++.+++.+. +.++++.||+||+++.+..+... .........|.+.++.+ ++
T Consensus 308 ~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 385 (567)
T PLN02479 308 PLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLD 385 (567)
T ss_pred cccceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCcee
Confidence 56889999999999999999999875 68999999999986544322100 00001134677777775 78
Q ss_pred EEeCCCCCCCCCC--CceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 155 IVSVDTQKPLPPN--QLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 155 i~d~~~~~~~~~g--~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
++|++++++++.+ +.|||+++|+.++..+ ...+ .++||+|||+++++++|.+++.||.||+||.+|.+|+
T Consensus 386 i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~ 464 (567)
T PLN02479 386 VVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENIS 464 (567)
T ss_pred EEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEc
Confidence 8886778888754 6799999999887632 3333 4789999999999999999999999999999999999
Q ss_pred cC
Q 027096 226 SN 227 (228)
Q Consensus 226 p~ 227 (228)
|.
T Consensus 465 ~~ 466 (567)
T PLN02479 465 SL 466 (567)
T ss_pred HH
Confidence 85
No 111
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.97 E-value=5.7e-30 Score=219.65 Aligned_cols=215 Identities=20% Similarity=0.251 Sum_probs=168.1
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
.+.++++++|++++.+|++|..++...++.++..|+++++.+.+++..+++.++++++|++.++|++++.+.........
T Consensus 232 ~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~ 311 (600)
T PRK08279 232 GGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTD 311 (600)
T ss_pred HHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccc
Confidence 34578999999999999999999988778889999999999999999999999999999999999999998876544444
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCC----CceEE------
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAP----GVEAL------ 154 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~----~~~~~------ 154 (228)
...++|.+ +|+.+++++.+++.+.++...+++.||+||++...... ....+++|.+.+ +..+.
T Consensus 312 ~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~ 384 (600)
T PRK08279 312 RDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDT 384 (600)
T ss_pred cCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc-----CCCCcccccccccccccceeeeeccCc
Confidence 45567754 47889999999999999766799999999987543321 112345665544 33222
Q ss_pred ---EEeCCCC--CCCCCCCceEEE--EecCcccccccc------cc------cCCCeEEcCceEEEcCCCcEEEecccCC
Q 027096 155 ---IVSVDTQ--KPLPPNQLGEIW--LRGPNMMRATKL------TI------DKKGWVHTGDLGYFDGDGQLYVVDRIKE 215 (228)
Q Consensus 155 ---i~d~~~~--~~~~~g~~Gel~--v~~~~~~~~~~~------~~------~~~~~~~TGD~~~~~~~g~~~~~GR~~d 215 (228)
+.+ .++ .+++.|+.|||+ ++++.++..+.. .+ ..++||+|||+|+++++|.+++.||.||
T Consensus 385 ~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d 463 (600)
T PRK08279 385 GEPVRD-ADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGD 463 (600)
T ss_pred CceeeC-CCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCC
Confidence 222 222 357889999998 667766653311 11 2357999999999999999999999999
Q ss_pred ceeecCeEeecC
Q 027096 216 LIKYKGFQVTSN 227 (228)
Q Consensus 216 ~i~~~G~~v~p~ 227 (228)
+||++|++|+|.
T Consensus 464 ~ik~~G~~i~p~ 475 (600)
T PRK08279 464 TFRWKGENVATT 475 (600)
T ss_pred eEEECCcccCHH
Confidence 999999999984
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.6e-30 Score=220.93 Aligned_cols=219 Identities=25% Similarity=0.398 Sum_probs=174.5
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCC--
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-- 80 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-- 80 (228)
.+++.++|++++++|++|.+++...++.++..|+++++.+. .++..+++.+.+++++.++..|..+..+.....
T Consensus 212 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~ 291 (579)
T PRK09192 212 GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK 291 (579)
T ss_pred cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc
Confidence 67889999999999999999998778888999999877652 368899999999999877665554444433221
Q ss_pred -CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCC-----CeEEecccccccCCceeeccCCCC-----------------
Q 027096 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS-----ATVIQGYGLTETSGIATMENSFAG----------------- 137 (228)
Q Consensus 81 -~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~-----~~l~~~yG~tE~g~~~~~~~~~~~----------------- 137 (228)
....+++++|.++++|+++++++.+++.+.++. ..+++.||+||++..+........
T Consensus 292 ~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (579)
T PRK09192 292 DLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKA 371 (579)
T ss_pred cccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCcee
Confidence 223567899999999999999999999987632 358999999999876543321100
Q ss_pred ---------CCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccccc------cccccCCCeEEcCceEEEc
Q 027096 138 ---------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRAT------KLTIDKKGWVHTGDLGYFD 202 (228)
Q Consensus 138 ---------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~------~~~~~~~~~~~TGD~~~~~ 202 (228)
.....++|+|+++++++++| +++++++.|+.|||+++|+.++..+ ...+..++||+|||++++
T Consensus 372 ~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~- 449 (579)
T PRK09192 372 VAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL- 449 (579)
T ss_pred eccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-
Confidence 01124689999999999999 7789999999999999999887632 233445789999999999
Q ss_pred CCCcEEEecccCCceeecCeEeecC
Q 027096 203 GDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 203 ~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++|.++++||.||+||++|++|+|.
T Consensus 450 ~~G~l~~~GR~dd~i~~~G~~v~p~ 474 (579)
T PRK09192 450 LDGYLYITGRAKDLIIINGRNIWPQ 474 (579)
T ss_pred ECCEEEEEeccccEEEECCCccCHH
Confidence 8999999999999999999999984
No 113
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.97 E-value=7.2e-30 Score=218.16 Aligned_cols=215 Identities=22% Similarity=0.399 Sum_probs=163.8
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcCceEEEechHHHHHH-HhcC---CC
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILAL-AKHG---LV 81 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l-~~~~---~~ 81 (228)
..+++++++++|++|..|+...++.+++.|+++++.+.. ++..+++.+++++++.. .+|+.+..+ .... ..
T Consensus 204 ~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~ 282 (578)
T PRK05850 204 PPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDM 282 (578)
T ss_pred CCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhh
Confidence 356889999999999999987789999999999998642 78999999999999855 566554433 3221 11
Q ss_pred CCCCCCCceEEEEcccCCCHHHHHHHHHhCC-----CCeEEecccccccCCceeeccCCCCC------------------
Q 027096 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAGS------------------ 138 (228)
Q Consensus 82 ~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-----~~~l~~~yG~tE~g~~~~~~~~~~~~------------------ 138 (228)
....++++|.++.||+++++++.+++.+.|+ +..+++.||+||++..+.........
T Consensus 283 ~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 362 (578)
T PRK05850 283 AGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRC 362 (578)
T ss_pred cCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEec
Confidence 2345678999999999999999999988763 35789999999987654332111000
Q ss_pred -----CCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCcccccc-------ccccc-----------CCCeEEc
Q 027096 139 -----RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRAT-------KLTID-----------KKGWVHT 195 (228)
Q Consensus 139 -----~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~~-------~~~~~-----------~~~~~~T 195 (228)
......|.|. +.+++++|++++++++.|+.|||+++|+.++..+ ...|. .++||+|
T Consensus 363 ~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~T 441 (578)
T PRK05850 363 ETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRT 441 (578)
T ss_pred CCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeec
Confidence 0001234443 5789999977788999999999999999988633 22221 2579999
Q ss_pred CceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 196 GDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 196 GD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
||+++++ +|.++++||.||+||++|++|+|+
T Consensus 442 GDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~ 472 (578)
T PRK05850 442 GDLGFIS-EGELFIVGRIKDLLIVDGRNHYPD 472 (578)
T ss_pred cceeeEE-CCEEEEEcccccEEEECCeecCHH
Confidence 9999997 899999999999999999999985
No 114
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.8e-28 Score=207.51 Aligned_cols=210 Identities=22% Similarity=0.268 Sum_probs=168.7
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEechHHHHH-HHhcCC-CCCCCC
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILA-LAKHGL-VKKFDL 86 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~-l~~~~~-~~~~~~ 86 (228)
.++++++..+|++|..++.. ++.+++.|+++++.+ .+++..+++.++++++|.+.++|+.+.. +..... .....+
T Consensus 217 ~~~~~~~~~~pl~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~ 295 (533)
T PRK07798 217 GPGMRRFPAPPLMHGAGQWA-AFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDL 295 (533)
T ss_pred CCCceEEEecchhhhhhHHH-HHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCC
Confidence 67799999999999999986 789999999999998 7899999999999999999999875543 333222 234567
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCcc--ccCCCceEEEEeCCCCCCC
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAG--ALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g--~p~~~~~~~i~d~~~~~~~ 164 (228)
+++|.++++|+++++++.+++++.+++..+++.||+||++.+........ ....| .+.++..++++| ++++++
T Consensus 296 ~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----~~~~g~~~~~~~~~~~i~~-~~~~~~ 370 (533)
T PRK07798 296 SSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG----AVHTGGPRFTIGPRTVVLD-EDGNPV 370 (533)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC----CccCCCCccCCCceEEEEC-CCCCCC
Confidence 89999999999999999999999998899999999999976554332111 12233 678899999999 778899
Q ss_pred CCCCc--eEEEEecCccccc-------ccccc---cCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQL--GEIWLRGPNMMRA-------TKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~--Gel~v~~~~~~~~-------~~~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+.|+. |+++.. +.++.. +...+ +.++||+|||+++++++|.+++.||.||+||.+|.+|+|+
T Consensus 371 ~~g~~~~g~l~~~-~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~ 444 (533)
T PRK07798 371 EPGSGEIGWIARR-GHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPE 444 (533)
T ss_pred CCCCCCeeEEEee-cCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHH
Confidence 98887 777654 444432 12222 2346999999999999999999999999999999999985
No 115
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.97 E-value=8.5e-29 Score=210.20 Aligned_cols=217 Identities=25% Similarity=0.332 Sum_probs=167.9
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 86 (228)
.+.+.+++++++.+|++|..++...++.+ +.|++.++...+++..+++.++++++|++.++|++++.|.+........+
T Consensus 217 ~~~~~~~~~~l~~~pl~h~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 295 (545)
T PRK08162 217 AWGMPKHPVYLWTLPMFHCNGWCFPWTVA-ARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGI 295 (545)
T ss_pred hcCCCCCCeeEeccCcHhhhhHHHHHHHH-HHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCC
Confidence 45677889999999999999987644444 45666666667899999999999999999999999999987654433345
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC---------CCCCCCccccCCC-ceEEEE
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------SRNIGSAGALAPG-VEALIV 156 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~-~~~~i~ 156 (228)
...+.++++|+.+++++.+.+++. +.++++.||+||++..+..+..... ......+|.+.+. ..++++
T Consensus 296 ~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 373 (545)
T PRK08162 296 DHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVL 373 (545)
T ss_pred ccceEEEECCCCCCHHHHHHHHHh--CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEE
Confidence 566778899999999999998774 7899999999998755444321110 0112345555543 357888
Q ss_pred eCCCCCCCCC-C-CceEEEEecCcccccc-------cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 157 SVDTQKPLPP-N-QLGEIWLRGPNMMRAT-------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 157 d~~~~~~~~~-g-~~Gel~v~~~~~~~~~-------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|++++++++. | +.|||+++++.++..+ ...+ .++||+|||+++++++|.++++||.||+||.+|.+|+|.
T Consensus 374 d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~ 452 (545)
T PRK08162 374 DPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSI 452 (545)
T ss_pred cCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHH
Confidence 8677888875 3 4699999999887633 2233 468999999999999999999999999999999999984
No 116
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.96 E-value=2.2e-28 Score=201.57 Aligned_cols=209 Identities=18% Similarity=0.145 Sum_probs=161.6
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC--C
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK--F 84 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~ 84 (228)
+++++++|++++..+..+..+.....+.++..|++++..+..++..+++.|++++++++.++|+++..|++...... .
T Consensus 113 ~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~ 192 (422)
T TIGR02155 113 AAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDP 192 (422)
T ss_pred HcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCc
Confidence 36888999999877765544443335667888999988877778999999999999999999999998876543222 2
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCC--ceeeccCCCCCCCCCCccccCCCceEEEEeCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG--IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 162 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~--~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 162 (228)
...++|.++++||++++++.+.+.+.| ++++++.||+||+++ +...+... ..+.. .+.+.+.++++|+++++
T Consensus 193 ~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~tE~~~~~~~~~~~~~----~~g~~-~~~~~~~~eivd~~~g~ 266 (422)
T TIGR02155 193 AQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLSEVIGPGVAMECVET----QDGLH-IWEDHFYPEIIDPHTGE 266 (422)
T ss_pred ccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccchhhcCCceeeccccc----CCCce-EecCeeEEEEECCCCCC
Confidence 235899999999999999999999999 689999999999853 22222111 11111 12235678899977899
Q ss_pred CCCCCCceEEEEecCcccccccccccCCCeEEcCceEEEcCC-C-----cEEEecccCCceeecCeEeecC
Q 027096 163 PLPPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGD-G-----QLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 163 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~-g-----~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++++|+.|||++++.. ...+ ..+||+|||+++++++ | .+++.||.||+|+++|.+|+|.
T Consensus 267 ~v~~Ge~Gelvvt~~~-----~~~~-p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~ 331 (422)
T TIGR02155 267 VLPDGEEGELVFTTLT-----KEAL-PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPT 331 (422)
T ss_pred CCCCCCeeEEEEecCC-----cccc-ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHH
Confidence 9999999999999743 2333 4579999999999875 4 4689999999999999999984
No 117
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=2.9e-28 Score=202.84 Aligned_cols=194 Identities=28% Similarity=0.430 Sum_probs=159.6
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
...++..++|+++..+|++|.+++.. ++.+|..|+++++.+. ..+++.+. +++.+..+|+++..+......
T Consensus 168 ~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~--- 238 (458)
T PRK09029 168 LSLMPFTAQDSWLLSLPLFHVSGQGI-VWRWLYAGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE--- 238 (458)
T ss_pred hhcCCCCccceEEEecCcHhhhhhHH-HHHHHhCCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc---
Confidence 34577889999999999999999875 7788999999998764 45666663 789999999999998876432
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
..++|.+++||+++++.+.+++.+. +.++++.||+||++........ .....+|+|++++++++++
T Consensus 239 -~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~------- 304 (458)
T PRK09029 239 -PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA----DGLAGVGSPLPGREVKLVD------- 304 (458)
T ss_pred -CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC----CCCCCCCCCCCCCEEEEeC-------
Confidence 3479999999999999999998764 7899999999999876543322 1234699999999999987
Q ss_pred CCCCceEEEEecCcccccccc------cccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKL------TIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~------~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|||+++|+.++..+.. ....++||+|||+|+++ +|.+++.||+||+||++|.+|+|.
T Consensus 305 -----gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~ 367 (458)
T PRK09029 305 -----GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPE 367 (458)
T ss_pred -----CEEEEecCceeeeeecCccccccccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHH
Confidence 8999999988763321 11356899999999999 999999999999999999999984
No 118
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=1.8e-27 Score=192.26 Aligned_cols=187 Identities=27% Similarity=0.390 Sum_probs=154.2
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc---CCCCHHHHHHHHHhcC--ceEEEechHHHHHHHhcCCCCCCCC
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM---AKFDLEMFLRAIEKHR--VTHIWVVPPLILALAKHGLVKKFDL 86 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~---~~~~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~~ 86 (228)
..++++..+|++|..++.. ++.+++.|++.++. ..+++..+++.+++++ .++...+|..+..++.... ....+
T Consensus 73 ~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~ 150 (358)
T PRK07824 73 GPGQWLLALPAHHIAGLQV-LVRSVIAGSEPVELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAAL 150 (358)
T ss_pred CCCeEEEECChHHHHHHHH-HHHHHHcCCeEEecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCc
Confidence 4578899999999999876 78889999998873 3578999999999998 5666778888887766543 22457
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCC
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 166 (228)
.++|.++++|+++++++.+++.+. +.++++.||+||++..+. ..|.|++++++++.+
T Consensus 151 ~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE~~~~~~------------~~G~~~~g~~v~i~~--------- 207 (358)
T PRK07824 151 AELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSETSGGCV------------YDGVPLDGVRVRVED--------- 207 (358)
T ss_pred ccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCccCCCcC------------cCceeCCCCEEEecC---------
Confidence 889999999999999999998864 789999999999875431 357899999998844
Q ss_pred CCceEEEEecCcccccc-----cccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 167 NQLGEIWLRGPNMMRAT-----KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 167 g~~Gel~v~~~~~~~~~-----~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
|||+++|+.++..+ ...+..++||+|||++++ ++|.+++.||.||+||.+|++|+|.
T Consensus 208 ---Gei~v~g~~~~~gY~~~~~~~~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~ 269 (358)
T PRK07824 208 ---GRIALGGPTLAKGYRNPVDPDPFAEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQ 269 (358)
T ss_pred ---CEEEEecCccccccCCCcccccccCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHH
Confidence 89999999887632 222335679999999999 8899999999999999999999984
No 119
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.94 E-value=8.7e-27 Score=187.06 Aligned_cols=214 Identities=28% Similarity=0.384 Sum_probs=167.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHH----H----HHHHHhcCceEEEechHHHHHHHhcC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEM----F----LRAIEKHRVTHIWVVPPLILALAKHG 79 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~----~----~~~i~~~~~t~l~~~p~~~~~l~~~~ 79 (228)
..+.+.|+++..+|+.|+.-+.. =+.+++.|+++-+.+..+..+ + --.+...++|+|.++|..+.++.+.-
T Consensus 274 ~~lg~~D~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgV 352 (678)
T KOG1180|consen 274 PELGPKDRYIAYLPLAHILELTA-ELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGV 352 (678)
T ss_pred cccCCCceEEEechHHHHHHHHH-HHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHH
Confidence 36789999999999999999988 467799999988876432211 1 23346789999999999888664310
Q ss_pred --------------------------C----------------CCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEE
Q 027096 80 --------------------------L----------------VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVI 117 (228)
Q Consensus 80 --------------------------~----------------~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~ 117 (228)
+ .+...--+||.+++||++++++..+.+.-.+ .+++.
T Consensus 353 l~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~ 431 (678)
T KOG1180|consen 353 LSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVL 431 (678)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-ccccc
Confidence 0 0001114799999999999999998888777 67999
Q ss_pred ecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCC--ceEEEEecCcccc-------ccccccc
Q 027096 118 QGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ--LGEIWLRGPNMMR-------ATKLTID 188 (228)
Q Consensus 118 ~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~~~~-------~~~~~~~ 188 (228)
+.||.||++.-.+..... ....+.+|.|++-++++++|-+++.-...+. .|||+|+|+.++. .+.+.|.
T Consensus 432 qGYGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft 509 (678)
T KOG1180|consen 432 QGYGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFT 509 (678)
T ss_pred ccccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhce
Confidence 999999998876655443 3455799999999999999976664444444 6999999999987 4555565
Q ss_pred C-CC--eEEcCceEEEcCCCcEEEecccCCceee-cCeEee
Q 027096 189 K-KG--WVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVT 225 (228)
Q Consensus 189 ~-~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~ 225 (228)
. +| ||+|||+|++.+||+|.+.+|++|++|. +|+=|+
T Consensus 510 ~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIs 550 (678)
T KOG1180|consen 510 VEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYIS 550 (678)
T ss_pred ecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceee
Confidence 5 77 9999999999999999999999999999 888765
No 120
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=99.93 E-value=3.8e-24 Score=172.50 Aligned_cols=220 Identities=22% Similarity=0.215 Sum_probs=170.8
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 84 (228)
-+.++++++|+++..+|++|+++....+..++..|+|+++..+|++.++|+.+.++++|++.-+-.+.+.|+.++.....
T Consensus 275 ~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~e 354 (649)
T KOG1179|consen 275 YYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEE 354 (649)
T ss_pred HHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhh
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999998876666
Q ss_pred CCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCC-CCCCCCccccCCCceEEEEeCCCCC-
Q 027096 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SRNIGSAGALAPGVEALIVSVDTQK- 162 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~-~~~~~~~g~p~~~~~~~i~d~~~~~- 162 (228)
+-..+|.++ |..+.+++++.|.++|+..++.+.||+||...-.......-+ ........+-+--+++.-+|+++++
T Consensus 355 r~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~ 432 (649)
T KOG1179|consen 355 RQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEP 432 (649)
T ss_pred cCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecCccccccchhhhhhhccceEEEEecCCCCce
Confidence 666777776 777999999999999977889999999997664444322110 1111111222233455555666665
Q ss_pred ---------CCCCCCceEEEEe--cCcc---ccc------------ccccc-cCCCeEEcCceEEEcCCCcEEEecccCC
Q 027096 163 ---------PLPPNQLGEIWLR--GPNM---MRA------------TKLTI-DKKGWVHTGDLGYFDGDGQLYVVDRIKE 215 (228)
Q Consensus 163 ---------~~~~g~~Gel~v~--~~~~---~~~------------~~~~~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d 215 (228)
+|++||+|.++-+ .... +.. ....| ..|-||.|||+-..|+.|.+++.+|..|
T Consensus 433 iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGD 512 (649)
T KOG1179|consen 433 IRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGD 512 (649)
T ss_pred eecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCC
Confidence 5678999987533 2111 111 11222 2345999999999999999999999999
Q ss_pred ceeecCeEeec
Q 027096 216 LIKYKGFQVTS 226 (228)
Q Consensus 216 ~i~~~G~~v~p 226 (228)
....+|+||+.
T Consensus 513 TFRWKGENVsT 523 (649)
T KOG1179|consen 513 TFRWKGENVST 523 (649)
T ss_pred ceeecCCcccH
Confidence 99999999975
No 121
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.92 E-value=5.6e-24 Score=176.07 Aligned_cols=208 Identities=19% Similarity=0.080 Sum_probs=152.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC--CC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK--FD 85 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~ 85 (228)
.+++++|+++...|..+..+.....+.++..|++++.... ....++.|++++++.+.++|+.+..+++..+... ..
T Consensus 125 ~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~ 202 (445)
T TIGR03335 125 QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPA 202 (445)
T ss_pred cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcc
Confidence 4889999999999988776665545667888988765442 3456889999999999999998888776433222 12
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
..++|.++++||++++++++.+.+.| ++++++.||+||++. +..+.... + ...+.+...++|+|++++.+++
T Consensus 203 ~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE~~~-~~~c~~~~-----g-~h~~~d~~~vEIvDp~~~~~vp 274 (445)
T TIGR03335 203 ESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGSTEGTM-CGECQAVA-----G-LHVPEDLVHLDVYDPRHQRFLP 274 (445)
T ss_pred cCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChhhhhh-eEEecCCC-----C-ccccCCceEEEEEcCCCCCCCc
Confidence 46899999999999999999999988 799999999999863 33332110 1 1123345789999988888999
Q ss_pred CCCceEEEEecCcccccccccccCCCeEEcCceEEEc--CC---C----cEEEecccCCceeecCeEeecC
Q 027096 166 PNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFD--GD---G----QLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 166 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~--~~---g----~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
+|+.|||++++-.... +...+ +-=-|+|||++++. +. | .+...||.||+++++|.+|+|+
T Consensus 275 ~Ge~GELvvT~L~~~~-~r~~~-PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~ 343 (445)
T TIGR03335 275 DGECGRIVLTTLLKPG-ERCGS-LLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRV 343 (445)
T ss_pred CCCceEEEEEecCCCC-ccCCc-eEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHH
Confidence 9999999998754310 00000 00138999999963 22 2 1445799999999999999985
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.92 E-value=5e-24 Score=172.77 Aligned_cols=181 Identities=20% Similarity=0.207 Sum_probs=139.8
Q ss_pred ccccCCC--CcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 6 QETAGEL--DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 6 ~~~~~~~--~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
+.++.+. .|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++.. +++.++|++++.+.+..
T Consensus 129 ~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~---- 202 (386)
T TIGR02372 129 KILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD---- 202 (386)
T ss_pred HHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----
Confidence 3455543 468999999999999877688899999999998888888888877643 78999999999997642
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 163 (228)
..+++++. +++|+++++++.+.+.+. +...+++.||+||+++++.... ....++|+|++++.+ +++..
T Consensus 203 ~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~-------~~~~~~~~p~~~~~~---~~~~~ 270 (386)
T TIGR02372 203 YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA-------PDDPFRLLPDLACFA---DTLSS 270 (386)
T ss_pred cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC-------CCCCcccCCCccccC---CCccC
Confidence 33566775 678999999999999885 3357999999999987654321 123456777766543 11110
Q ss_pred CCCCCceEEEEecCcccccccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEeecC
Q 027096 164 LPPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 164 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
.+ ...|++|||+++++++|.+++.||.||+||++|++|+|.
T Consensus 271 -----------~g------------~~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~ 311 (386)
T TIGR02372 271 -----------AG------------LARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPG 311 (386)
T ss_pred -----------CC------------ccceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHH
Confidence 01 123689999999999999999999999999999999985
No 123
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=3.1e-22 Score=173.22 Aligned_cols=219 Identities=21% Similarity=0.241 Sum_probs=180.0
Q ss_pred cccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCC
Q 027096 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (228)
Q Consensus 5 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 81 (228)
.+.+..+..|+++...++++..+... ++.++..|+++++.+. .++..+.+.+.++++|.+..+|..+..++.....
T Consensus 399 ~~~~~~~~~d~~l~~~s~~fD~~~~~-~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~ 477 (642)
T COG1020 399 GARFGLDADDRVLALASLSFDASVFE-IFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALA 477 (642)
T ss_pred HHhcCCCcccEEeecCCcccchhHHH-HHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhh
Confidence 34588999999999999999988887 8999999999999874 5899999999999999999999999988876322
Q ss_pred CC--CCCCCceEEEEcccCCCHHHHHHHHHhCC-CCeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeC
Q 027096 82 KK--FDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (228)
Q Consensus 82 ~~--~~~~~lr~~~~~G~~l~~~~~~~~~~~~~-~~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 158 (228)
.. .....+|.++++|+.++.++.+++....+ ...+.|.||+||+.................++|.|+++..+.++|
T Consensus 478 ~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild- 556 (642)
T COG1020 478 PDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD- 556 (642)
T ss_pred ccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-
Confidence 22 22235899999999999999999888764 578999999999666554433222122146899999999999999
Q ss_pred CCCCCCCCCCceEEEEecCcccc-------cccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 159 DTQKPLPPNQLGEIWLRGPNMMR-------ATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 159 ~~~~~~~~g~~Gel~v~~~~~~~-------~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
+..++++.|..||+++.|..+.. .+.+.|..+.+|+|||+++...+|.+.++||.|+++|++|.+|.
T Consensus 557 ~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Rie 630 (642)
T COG1020 557 QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIE 630 (642)
T ss_pred CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecC
Confidence 88999999999999999988876 23333322248999999999999999999999999999999983
No 124
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.88 E-value=3.6e-21 Score=153.96 Aligned_cols=207 Identities=20% Similarity=0.150 Sum_probs=157.1
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC--CC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK--FD 85 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~ 85 (228)
.+...+|++..+.-..--.|.....+.+---|++++...+-+.+.-+.++..+++|.+.++|+++..+++..+... ..
T Consensus 129 ~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~ 208 (438)
T COG1541 129 AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPD 208 (438)
T ss_pred ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChh
Confidence 5677888887766632222222224555557888887766688999999999999999999999999988765442 33
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCce-eeccCCCCCCCCCCccccCCCceEEEEeCCCCCCC
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIA-TMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~-~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~ 164 (228)
-.++|.+++|+|+++++.++.+.+.| +++.+++||+||..+.. ..|.... -..-......++++||++++.+
T Consensus 209 ~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGltE~~g~g~~eC~~~~------glhi~eD~~~~Ei~dP~t~e~l 281 (438)
T COG1541 209 KLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGLTEGFGPGAGECTERN------GLHIWEDHFIFEIVDPETGEQL 281 (438)
T ss_pred hcceeEEEEecccCCHHHHHHHHHHh-CCceeeccccccccCCccccccccc------CCCcchhhceeeeecCCcCccC
Confidence 45799999999999999999999999 89999999999987663 2232211 1111345678999999999999
Q ss_pred CCCCceEEEEecCcccccccccccCCCeEEcCceEEEcCC----C-----cEEEecccCCceeecCeEeecC
Q 027096 165 PPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGD----G-----QLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~----g-----~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
++|+.|||++++-.-. .+ +-=-|+|||+..+.++ | ...+.||.||++++.|.+|+|+
T Consensus 282 ~dge~GelV~T~L~~~-----~~-PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~ 347 (438)
T COG1541 282 PDGERGELVITTLTKE-----GM-PLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPS 347 (438)
T ss_pred CCCCeeEEEEEecccc-----Cc-ceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHH
Confidence 9999999999874421 11 1114999999998653 2 2579999999999999999996
No 125
>PTZ00297 pantothenate kinase; Provisional
Probab=99.68 E-value=3.8e-16 Score=142.62 Aligned_cols=187 Identities=15% Similarity=0.105 Sum_probs=131.4
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCC----C---
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL----V--- 81 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~----~--- 81 (228)
...++|++++.+|++|+++... .+.+++.|+++.. +++..+++.|+++++|+++++|.+++.+.+... .
T Consensus 641 ~~~~~D~~Ls~LPLaHI~er~~-~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~ 716 (1452)
T PTZ00297 641 SSFKKHLMVHFTPFAMLFNRVF-VLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSA 716 (1452)
T ss_pred CCCCCCEEEEechHHHHHHHHH-HHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhH
Confidence 3467899999999999999655 6778999999864 478999999999999999999999997754210 0
Q ss_pred --------------------CCC---------------CCCCceEEEEccc--CCCHHHHHHHHHhCCCCeEEecccccc
Q 027096 82 --------------------KKF---------------DLSSLKLVGSGAA--PLGKELMEECAKNVPSATVIQGYGLTE 124 (228)
Q Consensus 82 --------------------~~~---------------~~~~lr~~~~~G~--~l~~~~~~~~~~~~~~~~l~~~yG~tE 124 (228)
... .-.++|.+++||. +++..+.+ +.++...||.||
T Consensus 717 ~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~g~glTE 789 (1452)
T PTZ00297 717 VYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCYVPCLRE 789 (1452)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEEecceEE
Confidence 000 0046888888873 44433332 467888999999
Q ss_pred cCCceeeccCCCCCCCCCCccccCCCceEEEEeC-CCCCCCCCCCceEEEEecCcccccccccccCCCeEEcCceEEEcC
Q 027096 125 TSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQKPLPPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDG 203 (228)
Q Consensus 125 ~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~ 203 (228)
... ..... .....|.|+|+++++|.+. +.+.. +..|||++++..--..+.+. .++| .+
T Consensus 790 ~~~---~~~~~----~~~~~G~PlpgvEvKI~~~~E~~~~---~~~GEIlvr~~kdpe~T~e~--~~gW---------~~ 848 (1452)
T PTZ00297 790 VFF---LPSEG----VFCVDGTPAPSLQVDLEPFDEPSDG---AGIGQLVLAKKGEPRRTLPI--AAQW---------KR 848 (1452)
T ss_pred eee---ecCCC----CcccCCeecCceEEEEcccccccCC---CCCCeEEEEECCChHHHHHh--hCcC---------cc
Confidence 532 22211 1123499999999999873 22221 23599999875211122221 1344 47
Q ss_pred CCcEEEecccCCceee-cCeEeecC
Q 027096 204 DGQLYVVDRIKELIKY-KGFQVTSN 227 (228)
Q Consensus 204 ~g~~~~~GR~~d~i~~-~G~~v~p~ 227 (228)
||.|+|.||++|+||. +|++|+|+
T Consensus 849 dG~L~IidRkKdlikls~GEyVaP~ 873 (1452)
T PTZ00297 849 DRTLRLLGPPLGILLPVAYEYVIAA 873 (1452)
T ss_pred CCeEEEEeccccceECCCCcEEcHH
Confidence 8999999999999999 99999996
No 126
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.57 E-value=3.2e-14 Score=116.36 Aligned_cols=155 Identities=15% Similarity=0.075 Sum_probs=107.9
Q ss_pred CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCC
Q 027096 48 FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG 127 (228)
Q Consensus 48 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~ 127 (228)
.+.+..++.|++++++++.+.|+.+..|++..+..... .+++.++++||.++++..+.+.+.| ++++++.||+|| |.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 46788999999999999999999999998864433333 4689999999999999999999999 799999999999 65
Q ss_pred ceeeccCCCCCCCCCCccccCC-CceEE--EEeCCCCCCCCCCCceEEEEecCcccccccccccCCCeEEcCceEEEcCC
Q 027096 128 IATMENSFAGSRNIGSAGALAP-GVEAL--IVSVDTQKPLPPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGD 204 (228)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~p~~-~~~~~--i~d~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 204 (228)
++..|... . -+..+ .+.++ ++| ++++ ++.+|++-.....+.. -|+|||++...++
T Consensus 251 la~eC~~g-------~-lHl~ed~~~vE~~ivD-~~~~-------~~~ViT~L~n~~~PlI------RYrtGD~~~~~~~ 308 (430)
T TIGR02304 251 LASTCRCG-------T-LHLNEDLVHIEKQYLD-EHKR-------FVPIITDFTRTTQPIV------RYRLNDILVESEQ 308 (430)
T ss_pred eEEecCCC-------C-EEEccccEEEEeeEEC-CCCc-------eEEEEecCCCccceEE------eeeCCCEEEeCCC
Confidence 55444211 1 11222 23344 778 3343 3446655332111111 3899999887443
Q ss_pred ----Cc----E-EEecccCCceee---cCeEe--ecC
Q 027096 205 ----GQ----L-YVVDRIKELIKY---KGFQV--TSN 227 (228)
Q Consensus 205 ----g~----~-~~~GR~~d~i~~---~G~~v--~p~ 227 (228)
|. + .+.||.||+++. +|..+ +|.
T Consensus 309 ~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~ 345 (430)
T TIGR02304 309 PCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPD 345 (430)
T ss_pred CCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHH
Confidence 22 3 488999999985 45544 663
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.04 E-value=5.5e-09 Score=91.32 Aligned_cols=219 Identities=19% Similarity=0.214 Sum_probs=146.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 83 (228)
..+.+..-++...+.+-..|+..+++..+++|...+++++ -++..++..++++++.-++.+=+.+....+......
T Consensus 979 ~~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~ 1058 (1363)
T KOG3628|consen 979 CQLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSV 1058 (1363)
T ss_pred HccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhcccccc
Confidence 3455555566667777777888889999999999888864 489999999999999988887776665554322111
Q ss_pred -------CCCCCceEEEEcccCCCHHHHHHHHHhCCC-----CeEEecccccccCCceeeccC----------CCC----
Q 027096 84 -------FDLSSLKLVGSGAAPLGKELMEECAKNVPS-----ATVIQGYGLTETSGIATMENS----------FAG---- 137 (228)
Q Consensus 84 -------~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~-----~~l~~~yG~tE~g~~~~~~~~----------~~~---- 137 (228)
.+.++ ..++..-++...++.+-+.+.|.. ..+.-.|++-=--.++..... ...
T Consensus 1059 enl~~~gnn~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~g 1137 (1363)
T KOG3628|consen 1059 ENLSKRGNNTSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREG 1137 (1363)
T ss_pred chhhhhhccccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhcc
Confidence 12222 445556777788888888776621 123344443322222221000 000
Q ss_pred -----------CCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecCccccc-----------------ccccccC
Q 027096 138 -----------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRA-----------------TKLTIDK 189 (228)
Q Consensus 138 -----------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~~-----------------~~~~~~~ 189 (228)
.......|...+++++.++++|+..+|.+|+.||||+.|.+.... .......
T Consensus 1138 rV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~ 1217 (1363)
T KOG3628|consen 1138 RVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLG 1217 (1363)
T ss_pred ceeeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhcccccccc
Confidence 000112377789999999999999999999999999999765431 0111123
Q ss_pred CCeEEcCceEEEc------CC----CcEEEecccCCceeecCeEeecC
Q 027096 190 KGWVHTGDLGYFD------GD----GQLYVVDRIKELIKYKGFQVTSN 227 (228)
Q Consensus 190 ~~~~~TGD~~~~~------~~----g~~~~~GR~~d~i~~~G~~v~p~ 227 (228)
..|-||||+|+.. +. ..+|++|-.++.+-++|.+-+|.
T Consensus 1218 ~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~ 1265 (1363)
T KOG3628|consen 1218 KSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPS 1265 (1363)
T ss_pred ccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcc
Confidence 4599999999972 22 35999999999999999887764
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.99 E-value=9.7e-09 Score=91.05 Aligned_cols=219 Identities=15% Similarity=0.044 Sum_probs=126.0
Q ss_pred ecccccCCCCcEEEEecc-h-hhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHhc
Q 027096 4 MDQETAGELDYVFLCVLP-L-FHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKH 78 (228)
Q Consensus 4 ~~~~~~~~~~d~~~~~~p-~-~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~ 78 (228)
+...+..+..+++ .+.+ . ++..-... ....|++|+.+..+.. -++.++.+.+++++++..+.+|++.++++..
T Consensus 228 ~~~~f~~t~s~~~-~~~~~~~~~d~i~~~-~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~ 305 (1032)
T KOG1178|consen 228 MFTTFPPTGSDRF-TFKTSVYFDDTIQKF-IGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAI 305 (1032)
T ss_pred ccccCCcCccchh-hhhheeecccchHHH-HhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhh
Confidence 3444566666654 2222 2 23322222 5566777776666543 2479999999999999999999997777654
Q ss_pred CCC-------------CCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccccccCCceeeccCCCCC--CCCCC
Q 027096 79 GLV-------------KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGS--RNIGS 143 (228)
Q Consensus 79 ~~~-------------~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~~~--~~~~~ 143 (228)
... ...+.++|+..+.+|++....+...+...+...-...-|+++|.............. .....
T Consensus 306 ~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~ 385 (1032)
T KOG1178|consen 306 LTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNEN 385 (1032)
T ss_pred cCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceeccee
Confidence 321 112335799999999999988888666655334444558888876655432211100 00111
Q ss_pred ccccCCC-------ceEEEEeCCCCCCCCCCCceEEEEec----Cccccc--c------cccc---cCCCeEEcCceEEE
Q 027096 144 AGALAPG-------VEALIVSVDTQKPLPPNQLGEIWLRG----PNMMRA--T------KLTI---DKKGWVHTGDLGYF 201 (228)
Q Consensus 144 ~g~p~~~-------~~~~i~d~~~~~~~~~g~~Gel~v~~----~~~~~~--~------~~~~---~~~~~~~TGD~~~~ 201 (228)
+..+-.+ ..+.+.. ..+.+.+.++.+...... .+.... + ...+ ..+..|+|||+|+.
T Consensus 386 v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~ 464 (1032)
T KOG1178|consen 386 VYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDGYSTPENFLPNFLTVDGVKARIYRTGDNGRS 464 (1032)
T ss_pred EEeccchhhccCCCcceeeee-ccCcccCCcccceeecccccccceeeccccchhhcCCcccccccchhhccccccccee
Confidence 1111111 1112222 233333333222221111 111111 1 1111 12458999999998
Q ss_pred cCCCcEEEecccCCceeecCeEee
Q 027096 202 DGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 202 ~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
-.+|.+.+.||.|+.||.+|.++-
T Consensus 465 l~ng~l~~~GR~d~qIK~rG~Ri~ 488 (1032)
T KOG1178|consen 465 LKNGGLEISGRADRQIKDRGVRIE 488 (1032)
T ss_pred ecCCCEEEEEeccceEEEccEEEe
Confidence 889999999999999999999984
No 129
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.83 E-value=1.6e-07 Score=75.66 Aligned_cols=163 Identities=23% Similarity=0.278 Sum_probs=105.9
Q ss_pred hhcCcEEEEcC-CCCHHHHHHHH----HhcCceEEEechHHHHHHHhcCCCCC--CCCC-CceEEEEcc------cCCC-
Q 027096 36 LQKGSCIILMA-KFDLEMFLRAI----EKHRVTHIWVVPPLILALAKHGLVKK--FDLS-SLKLVGSGA------APLG- 100 (228)
Q Consensus 36 l~~G~~~~~~~-~~~~~~~~~~i----~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~~-~lr~~~~~G------~~l~- 100 (228)
+..++...+-. .++.+.+...+ .+.++..++.+|.++..++...+... ..++ ..+.+..|| +.++
T Consensus 162 ~~~~~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r 241 (365)
T PF04443_consen 162 LFFGSRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSR 241 (365)
T ss_pred cccCceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCH
Confidence 44556644422 36777666655 35568889999988777765433232 2333 455555554 5565
Q ss_pred HHHHHHHHHhCCC---CeEEecccccccCCceeeccCCCCCCCCCCccccCCCceEEEEeCCCCCCCCCCCceEEEEecC
Q 027096 101 KELMEECAKNVPS---ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGP 177 (228)
Q Consensus 101 ~~~~~~~~~~~~~---~~l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 177 (228)
++..+.+.+.|+- ..+++.||+||.......+... . .+.|.- +.+.|+++-++++.|+.|-|.+-++
T Consensus 242 ~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~-------~--~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl 311 (365)
T PF04443_consen 242 EEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG-------H--FHVPPW-VIIRDPETLEPLPPGETGLIQVIDL 311 (365)
T ss_pred HHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC-------c--ccCCCe-EEEECCCCCcCCCCCCeeEEEEEcc
Confidence 5667777777733 4799999999977654433111 1 122222 7777989999999999999988765
Q ss_pred cccccccccccCCCeEEcCceEEEcCC--------CcEEEecccCC
Q 027096 178 NMMRATKLTIDKKGWVHTGDLGYFDGD--------GQLYVVDRIKE 215 (228)
Q Consensus 178 ~~~~~~~~~~~~~~~~~TGD~~~~~~~--------g~~~~~GR~~d 215 (228)
.... .-+..-|.|+|.+.++ .++.++||.+.
T Consensus 312 ~~~s-------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 312 ANTS-------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred cccC-------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 5432 3344779999987543 26999999874
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.67 E-value=1.8e-07 Score=82.16 Aligned_cols=216 Identities=19% Similarity=0.164 Sum_probs=139.9
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEechHHHHHHHh----c
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAK----H 78 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~----~ 78 (228)
..++....+.++.-...+...|+...++.+|++|.|.+..|+ ..+..+.+.+..++++++..--..+.+... .
T Consensus 303 ~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~ 382 (1363)
T KOG3628|consen 303 HVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQED 382 (1363)
T ss_pred hccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCC
Confidence 345667778888888888888999999999999999999986 678899999999999987654333332221 1
Q ss_pred C-------CCCCCCCCCceEEEEcccCCCHHHHHHHHHhC----C-----------------CCeEEecccccccCCcee
Q 027096 79 G-------LVKKFDLSSLKLVGSGAAPLGKELMEECAKNV----P-----------------SATVIQGYGLTETSGIAT 130 (228)
Q Consensus 79 ~-------~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~----~-----------------~~~l~~~yG~tE~g~~~~ 130 (228)
+ +.+..+++++|.+++.-..+..+..+-..+.| + +.-.+..=+++|.+....
T Consensus 383 p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~ 462 (1363)
T KOG3628|consen 383 PKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSI 462 (1363)
T ss_pred cccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccc
Confidence 1 11225678999999988888887765554443 1 111223333455555443
Q ss_pred eccCCCC----------------------------CCCCCCccccCCC-ceEEEEeCCCCCCCCCCCceEEEEecCcccc
Q 027096 131 MENSFAG----------------------------SRNIGSAGALAPG-VEALIVSVDTQKPLPPNQLGEIWLRGPNMMR 181 (228)
Q Consensus 131 ~~~~~~~----------------------------~~~~~~~g~p~~~-~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 181 (228)
..+.... ......++...++ +.+.++++++.+.|..++.|||||.+++...
T Consensus 463 r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~ 542 (1363)
T KOG3628|consen 463 RRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGK 542 (1363)
T ss_pred cCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCccc
Confidence 3322110 0112234554544 6778888888999999999999999988765
Q ss_pred ----------cccccc---------cCCCeEEcCceEEEcCCCcEEEecccCCceeecC
Q 027096 182 ----------ATKLTI---------DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKG 221 (228)
Q Consensus 182 ----------~~~~~~---------~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G 221 (228)
.+++.. ....+.|||=+|++..++.+++.++.|......|
T Consensus 543 ~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~ 601 (1363)
T KOG3628|consen 543 LFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSG 601 (1363)
T ss_pred ceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhh
Confidence 111111 1123899999999976654444445444433344
No 131
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=98.59 E-value=1.1e-07 Score=72.10 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=53.4
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCce
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVT 63 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 63 (228)
..++++++|+++ .+|++|..|+...++.+|..|+++++.++|++..+++.|++++||
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 456789999999 999999999988899999999999999999999999999999986
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.35 E-value=3.6e-07 Score=73.63 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=30.7
Q ss_pred CCCeEEcCceEEE-cCCCcEEEecccCCceeecC---eEeecC
Q 027096 189 KKGWVHTGDLGYF-DGDGQLYVVDRIKELIKYKG---FQVTSN 227 (228)
Q Consensus 189 ~~~~~~TGD~~~~-~~~g~~~~~GR~~d~i~~~G---~~v~p~ 227 (228)
.+|||+|||+|++ |++|.+++.||.+ +| .||+|+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~ 244 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA 244 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH
Confidence 6799999999998 7999999999998 78 788884
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.97 E-value=5.9e-05 Score=64.22 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=69.2
Q ss_pred CCCceEEEEcccCCCHHHHHHHHHhCCCCe-EEecccccccCCceeeccCCCCCCCCCCccccCCC-ceEEEEeCCC---
Q 027096 86 LSSLKLVGSGAAPLGKELMEECAKNVPSAT-VIQGYGLTETSGIATMENSFAGSRNIGSAGALAPG-VEALIVSVDT--- 160 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~-l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~-~~~~i~d~~~--- 160 (228)
.++|+.+.+.+..-...-.+++++.+|++. +...|++||+ .+....... ....+-.|-.+ .|+.-++...
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~~----~~~~~l~~~~~ffEFip~~~~~~~~ 340 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDPE----DPGYVLAPDSGFFEFIPVDEDEQNP 340 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-CC----C--EEE-TTSSEEEEEE-STT----
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCCC----CCceEeecCCeEEEEEeccCCcccc
Confidence 578997666555555677778888887755 4589999995 333322211 11111112122 2333333111
Q ss_pred ---C-----CCCCCCCceEEEEecCcccccccccccCCCeEEcCceEEEc--CCC--cEEEecccCCceeecCeEeec
Q 027096 161 ---Q-----KPLPPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFD--GDG--QLYVVDRIKELIKYKGFQVTS 226 (228)
Q Consensus 161 ---~-----~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~--~~g--~~~~~GR~~d~i~~~G~~v~p 226 (228)
+ ..++.|+.-||+|++..-. --|+.||++++. .++ .+.|+||.+.++++.|+|++.
T Consensus 341 ~~~~~~l~~~ele~G~~YelviTt~~GL----------yRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e 408 (528)
T PF03321_consen 341 SEQPKTLLLHELEVGEEYELVITTNSGL----------YRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSE 408 (528)
T ss_dssp ---SSSEEGGG--TT-EEEEEEESTTS-----------SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEH
T ss_pred cCCCceecHHHhcCCCeEEEEEecccce----------eeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCH
Confidence 2 2456788889998763311 139999999974 233 799999999999999999874
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.41 E-value=0.0029 Score=54.35 Aligned_cols=127 Identities=14% Similarity=0.050 Sum_probs=77.3
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEE-ecccccccCCceeeccCCCCCCCCCC-ccccCCC---ceEEEEeC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGS-AGALAPG---VEALIVSV 158 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~-~~yG~tE~g~~~~~~~~~~~~~~~~~-~g~p~~~---~~~~i~d~ 158 (228)
...+++++|-+.-..-...-...++.-++++++. ..|++||+-. .....+. ..+.. .....|+ .|+.-++.
T Consensus 301 rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~-ginl~P~---~~p~~~sy~L~p~~~yFEFip~~~ 376 (612)
T PLN02620 301 RLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF-GVNLNPL---CKPSEVSYTLIPTMAYFEFLPVHR 376 (612)
T ss_pred HhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEE-EeccCCC---CCcccceeeecCCcEEEEEeeccC
Confidence 3457788776655555566667777777787655 8999999533 3322111 01111 1122233 12322221
Q ss_pred CC-----------------CC-----CCCCCCceEEEEecCcccccccccccCCC--eEEcCceEEE----cCCCcEEEe
Q 027096 159 DT-----------------QK-----PLPPNQLGEIWLRGPNMMRATKLTIDKKG--WVHTGDLGYF----DGDGQLYVV 210 (228)
Q Consensus 159 ~~-----------------~~-----~~~~g~~Gel~v~~~~~~~~~~~~~~~~~--~~~TGD~~~~----~~~g~~~~~ 210 (228)
++ ++ .++.|+.-||+|+. ..| -|+.||+.+. +..-.+.|+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt------------~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv 444 (612)
T PLN02620 377 NNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT------------YAGLYRYRVGDVLRVAGFKNKAPQFSFI 444 (612)
T ss_pred cccccccccccccccccccCccccHHHccCCCeEEEEEEe------------cCceEEEecCCEEEEeeecCCCceEEEE
Confidence 11 11 24677778888865 223 3899999987 345689999
Q ss_pred cccCCceeecCeEeec
Q 027096 211 DRIKELIKYKGFQVTS 226 (228)
Q Consensus 211 GR~~d~i~~~G~~v~p 226 (228)
+|.+.+..+.|.|+..
T Consensus 445 ~R~~~~lsi~gEK~tE 460 (612)
T PLN02620 445 CRKNVVLSIDSDKTDE 460 (612)
T ss_pred eecCceeecccccCCH
Confidence 9999999999998764
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.38 E-value=0.0086 Score=51.74 Aligned_cols=122 Identities=11% Similarity=0.076 Sum_probs=71.8
Q ss_pred CCC---ceEEEEcccCCCHHHHHHHHHhCCCCe-EEecccccccCCceeeccCCCCCCCCCCccc-c-CCCceEEEEeCC
Q 027096 86 LSS---LKLVGSGAAPLGKELMEECAKNVPSAT-VIQGYGLTETSGIATMENSFAGSRNIGSAGA-L-APGVEALIVSVD 159 (228)
Q Consensus 86 ~~~---lr~~~~~G~~l~~~~~~~~~~~~~~~~-l~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~-p-~~~~~~~i~d~~ 159 (228)
.++ +..++.||.. .-.+.++..+++.. +...|++||+. +........ .+..++. . ..+.-.+-++.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~-~gi~~~~~~---~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESY-FGINLNPMC---KPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceE-EEeecCCCC---CCCCcceEecCCcEEEEeeecc
Confidence 466 5555555533 56677777776654 56999999953 233221110 0011111 0 113333333211
Q ss_pred -CC------------CCCCCCCceEEEEecCcccccccccccCCC--eEEcCceEEEc----CCCcEEEecccCCceeec
Q 027096 160 -TQ------------KPLPPNQLGEIWLRGPNMMRATKLTIDKKG--WVHTGDLGYFD----GDGQLYVVDRIKELIKYK 220 (228)
Q Consensus 160 -~~------------~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~--~~~TGD~~~~~----~~g~~~~~GR~~d~i~~~ 220 (228)
.+ ..++.|+.-+|+|++ ..| -|+.||.+++. .--++.|+||.+.++++.
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT------------~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~ 441 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITT------------YAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIE 441 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEc------------ccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecc
Confidence 11 134567777888865 333 39999999984 235799999999999999
Q ss_pred CeEeec
Q 027096 221 GFQVTS 226 (228)
Q Consensus 221 G~~v~p 226 (228)
|+++..
T Consensus 442 GEKl~e 447 (597)
T PLN02249 442 SDKTDE 447 (597)
T ss_pred cccCCH
Confidence 999864
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.31 E-value=0.0028 Score=54.40 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=78.2
Q ss_pred CCCCCceEEEEcccCCCHHHHHHHHHhCCCCeEE-ecccccccCCceeeccCCCCCCCCCCccccCCCc-eEEEEeCCCC
Q 027096 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSAGALAPGV-EALIVSVDTQ 161 (228)
Q Consensus 84 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~-~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~-~~~i~d~~~~ 161 (228)
...++++.|-+.-..-...-..+++.-++++++. ..|++||+-. .....+..... .......|+. -++-++.+++
T Consensus 290 rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~-ginl~p~~~p~--~~sy~L~p~~~yFEFip~~~~ 366 (606)
T PLN02247 290 RLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYF-GINLKPLSDPS--DVSYTLLPNMAYFEFLPVDKN 366 (606)
T ss_pred HhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEE-EeccCcCCCcc--CCceeecCCcEEEEEeecCCC
Confidence 3457788877655455666777887777887766 6999999533 33221110000 1112222331 2233321111
Q ss_pred -----------------------------CCCCCCCceEEEEecCcccccccccccCCC--eEEcCceEEE----cCCCc
Q 027096 162 -----------------------------KPLPPNQLGEIWLRGPNMMRATKLTIDKKG--WVHTGDLGYF----DGDGQ 206 (228)
Q Consensus 162 -----------------------------~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~--~~~TGD~~~~----~~~g~ 206 (228)
..++.|+.-||+|+. ..| -|+.||+.+. +..-.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt------------~~GLYRYrlGDvv~V~GF~n~~P~ 434 (606)
T PLN02247 367 NGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTT------------FTGLYRYRVGDILMVTGFYNNAPQ 434 (606)
T ss_pred cccccccccccccccccccccccCceecHHHccCCCeEEEEEEe------------cCceEEEecCCEEEEeeecCCCce
Confidence 134567777888765 233 4899999886 44568
Q ss_pred EEEecccCCceeecCeEeec
Q 027096 207 LYVVDRIKELIKYKGFQVTS 226 (228)
Q Consensus 207 ~~~~GR~~d~i~~~G~~v~p 226 (228)
+.|++|.+.+..+.|.|+..
T Consensus 435 ~~Fv~R~~~vlsi~gEK~tE 454 (606)
T PLN02247 435 FRFVQRRNVVLSIDTDKTNE 454 (606)
T ss_pred EEEEecCCceeecccccCCH
Confidence 99999999999999998764
No 137
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=86.10 E-value=7.9 Score=26.81 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=59.8
Q ss_pred cEEEEecch-hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH------HHHHHHhcCCCCCCC
Q 027096 14 YVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKFD 85 (228)
Q Consensus 14 d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~ 85 (228)
.+++...+- .|..|........-..|-.++... ...++++.+.+.+++++++.++-. .++.+.+..+ ...
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~--~~~ 82 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCI--EAG 82 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHH--hcC
Confidence 344444443 788888775556667788888775 467899999999999998776532 2233333221 122
Q ss_pred CCCceEEEEcccCC-----CHHHHHHHHHhCCCCeEEecccc
Q 027096 86 LSSLKLVGSGAAPL-----GKELMEECAKNVPSATVIQGYGL 122 (228)
Q Consensus 86 ~~~lr~~~~~G~~l-----~~~~~~~~~~~~~~~~l~~~yG~ 122 (228)
++.+ .+++||... +++..+++++. + +-..|++
T Consensus 83 ~~~~-~i~vGG~~~~~~~~~~~~~~~l~~~--G--~~~vf~~ 119 (137)
T PRK02261 83 LGDI-LLYVGGNLVVGKHDFEEVEKKFKEM--G--FDRVFPP 119 (137)
T ss_pred CCCC-eEEEECCCCCCccChHHHHHHHHHc--C--CCEEECc
Confidence 3344 466666553 34445566554 3 3445553
No 138
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=84.12 E-value=8.9 Score=32.55 Aligned_cols=88 Identities=14% Similarity=0.045 Sum_probs=63.4
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH-----HHHhc--
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL-----ALAKH-- 78 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~-----~l~~~-- 78 (228)
.+|++++|++..+.|-+.-.-+ ..+++-..|...+... .....++--.|.+.++..++..|.+-. .+.+.
T Consensus 96 ~lGL~kGDrVgvwgpN~~~w~l--~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icP 173 (596)
T KOG1177|consen 96 SLGLKKGDRVGVWGPNSYEWVL--CQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICP 173 (596)
T ss_pred hhcCCCCCEEEEecCChHHHHH--HHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhH
Confidence 4799999999999997664333 3566777788888774 466777888899999999998886532 23321
Q ss_pred -------CCCCCCCCCCceEEEEcc
Q 027096 79 -------GLVKKFDLSSLKLVGSGA 96 (228)
Q Consensus 79 -------~~~~~~~~~~lr~~~~~G 96 (228)
...+...++.+++++..+
T Consensus 174 Ev~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 174 EVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred HhhcCCCccccccccccceEEEecC
Confidence 123445678899988877
No 139
>PLN02736 long-chain acyl-CoA synthetase
Probab=82.44 E-value=16 Score=32.44 Aligned_cols=83 Identities=8% Similarity=0.002 Sum_probs=61.1
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..++.++|++...++-..-.. ...++++..|+.++... ..+++.+..++++.++..+++.+..+..+..... .
T Consensus 97 ~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~----~ 170 (651)
T PLN02736 97 QHGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS----E 170 (651)
T ss_pred HhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh----c
Confidence 368899999998888666533 33678889999998774 5789999999999999999998877666544211 2
Q ss_pred CCCceEEEEc
Q 027096 86 LSSLKLVGSG 95 (228)
Q Consensus 86 ~~~lr~~~~~ 95 (228)
++.++.++..
T Consensus 171 ~~~l~~ii~~ 180 (651)
T PLN02736 171 IPSVRLIVVV 180 (651)
T ss_pred CCCceEEEEE
Confidence 3455555543
No 140
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=80.25 E-value=21 Score=32.08 Aligned_cols=84 Identities=10% Similarity=0.030 Sum_probs=62.1
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 85 (228)
..+++++|++...++-..- +....++++..|+..+... ...++.+...+++.++..+++....+..+.+... .
T Consensus 125 ~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~----~ 198 (696)
T PLN02387 125 ALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISS----Q 198 (696)
T ss_pred HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh----c
Confidence 4588999999988886554 3334678899999999774 5789999999999999999998877776654321 2
Q ss_pred CCCceEEEEcc
Q 027096 86 LSSLKLVGSGA 96 (228)
Q Consensus 86 ~~~lr~~~~~G 96 (228)
++.++.++.-+
T Consensus 199 ~~~l~~ii~~~ 209 (696)
T PLN02387 199 LETVKRVIYMD 209 (696)
T ss_pred cCCceEEEEEC
Confidence 34566555443
No 141
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=79.41 E-value=25 Score=31.94 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=60.7
Q ss_pred ccCCCC-----------cEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELD-----------YVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~-----------d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.|+.++ |++...++-..- +....++++..|++.+.. +.+.++++..++++-++.++++.+..+..+
T Consensus 114 ~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e--w~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l 191 (746)
T PTZ00342 114 KGIPEKKYNEEQNNGKFKLLGLYGSNSIN--WLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGL 191 (746)
T ss_pred cCCCcCccccccccccccEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHH
Confidence 477777 888888876543 334467889999998887 468999999999999999999887777766
Q ss_pred HhcCCCCCCCCCCceEEEEc
Q 027096 76 AKHGLVKKFDLSSLKLVGSG 95 (228)
Q Consensus 76 ~~~~~~~~~~~~~lr~~~~~ 95 (228)
.... ..++.++.+++-
T Consensus 192 ~~~~----~~~~~l~~ii~~ 207 (746)
T PTZ00342 192 LERK----NELPHLKKLIIL 207 (746)
T ss_pred HHhh----ccCCCceEEEEE
Confidence 5432 124567666554
No 142
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=79.29 E-value=9.8 Score=28.16 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=55.7
Q ss_pred cEEEEecch--hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHH------HHHHHhcCCCCCC
Q 027096 14 YVFLCVLPL--FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKF 84 (228)
Q Consensus 14 d~~~~~~p~--~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~------~~~l~~~~~~~~~ 84 (228)
.+++..++. .|..|.......--..|-.++... ...++.+.+.+++.+++.+.++-+. ++.+.+..+...
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~- 163 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG- 163 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC-
Confidence 355555555 788888775555556777777654 5688999999999999987665322 222222211111
Q ss_pred CCCCceEEEEcccCCCHHHHH
Q 027096 85 DLSSLKLVGSGAAPLGKELME 105 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~ 105 (228)
..+.+ .+++||.++.++..+
T Consensus 164 ~~~~v-~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 164 YRDSV-KFMVGGAPVTQDWAD 183 (197)
T ss_pred CCCCC-EEEEEChhcCHHHHH
Confidence 11223 478899888876443
No 143
>PLN02614 long-chain acyl-CoA synthetase
Probab=77.57 E-value=34 Score=30.57 Aligned_cols=68 Identities=9% Similarity=-0.104 Sum_probs=54.8
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 76 (228)
..++.++|++...++-+.- +....++++..|+..+... ...++++..++++.++..+++....+..+.
T Consensus 98 ~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 166 (666)
T PLN02614 98 SVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELF 166 (666)
T ss_pred HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 3588999999999886654 3344778899999999885 578999999999999999998877665554
No 144
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=76.75 E-value=35 Score=30.42 Aligned_cols=67 Identities=7% Similarity=-0.066 Sum_probs=53.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 76 (228)
.++.++|++...++-..- +....++++..|++.+... ..+++++..++++.+++.+++....+..++
T Consensus 96 ~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 96 SGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 588999999988887665 3334678899999988875 578999999999999999998776544443
No 145
>PRK07788 acyl-CoA synthetase; Validated
Probab=73.50 E-value=25 Score=30.31 Aligned_cols=66 Identities=11% Similarity=0.002 Sum_probs=52.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...++-+-. +...+++++..|+.++..+ ....+.+...+++.++..++..+.....+
T Consensus 94 ~gi~~gd~V~i~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 94 LGVRAGDGVAVLARNHRG--FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLL 160 (549)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHH
Confidence 478899999988876543 3344789999999999886 47889999999999999998887665544
No 146
>PLN03102 acyl-activating enzyme; Provisional
Probab=73.21 E-value=25 Score=30.70 Aligned_cols=63 Identities=8% Similarity=0.056 Sum_probs=51.0
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...+|-.-. +...+++.+..|++++..+ ..+.+.+..+++..+++.+++.+...
T Consensus 59 ~Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 59 LNITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred cCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH
Confidence 578999999999885443 4444788999999988885 57899999999999999998876544
No 147
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=73.16 E-value=7.7 Score=27.99 Aligned_cols=77 Identities=8% Similarity=0.082 Sum_probs=47.7
Q ss_pred hcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccC-CCHHHHHHHHHhCCCCe
Q 027096 37 QKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKNVPSAT 115 (228)
Q Consensus 37 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~-l~~~~~~~~~~~~~~~~ 115 (228)
++.+.++++++.....+.+.+ ..++..-...+.++..+++..... ..+..++||.+ .-....+.+++.+|+..
T Consensus 3 ~~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 3 LNSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HHhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 456677777765555566666 555544455666777777654322 35677777764 33445557777888887
Q ss_pred EEec
Q 027096 116 VIQG 119 (228)
Q Consensus 116 l~~~ 119 (228)
+.-.
T Consensus 77 ivg~ 80 (172)
T PF03808_consen 77 IVGY 80 (172)
T ss_pred EEEe
Confidence 7643
No 148
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=72.25 E-value=30 Score=29.98 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=53.0
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~ 74 (228)
..++.++|++...++-+.. +...+++++..|+.++..+ .+.++++...+++.+++.+...+..+..
T Consensus 92 ~~gv~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 158 (570)
T PRK04319 92 ELGVEKGDRVFIFMPRIPE--LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLER 158 (570)
T ss_pred HhCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhc
Confidence 3578899999988886665 3344788999999988774 5788999999999999999988876544
No 149
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=72.15 E-value=20 Score=29.47 Aligned_cols=59 Identities=10% Similarity=0.039 Sum_probs=47.5
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEe
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV 67 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 67 (228)
..+++++|++....+-+.. +...+++++..|+..++.+ ..+.+.+...+++.+++++++
T Consensus 40 ~~g~~~~~~V~i~~~n~~~--~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 40 KLGVKKGDRVAILLPNSIE--FVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp HTTSSTTSEEEEEESSSHH--HHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEE
T ss_pred HhCCCccccccccCCccce--eeeeecccccccccccccccccccccccccccccceeEEEE
Confidence 4688999999888887543 3344788899999999985 578999999999999999996
No 150
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=71.87 E-value=20 Score=31.09 Aligned_cols=68 Identities=9% Similarity=0.039 Sum_probs=56.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHHh
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAK 77 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~ 77 (228)
++++++|++...+|-+..+... .++++..|+.+.... .++..++...+..-++.++++....+..+..
T Consensus 67 ~~i~~gDvV~i~~pNs~~~~~~--~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 67 LGIKKGDVVGILAPNTPEFVEL--ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISE 135 (537)
T ss_pred CCCCCCCEEEEEcCCCHHHHHH--HHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHH
Confidence 3588999999999987765444 678899999998885 5799999999999999999998777776643
No 151
>PRK06839 acyl-CoA synthetase; Validated
Probab=71.86 E-value=28 Score=29.39 Aligned_cols=67 Identities=6% Similarity=-0.039 Sum_probs=53.3
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.+++.++|++...++-+.. +...+++++..|+..+..+ ..++..+...+++.+++.++..+.....+
T Consensus 47 ~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 47 ELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred hcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 3578899999998887755 3344788999999999886 46888999999999999998887765443
No 152
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=71.09 E-value=19 Score=31.90 Aligned_cols=61 Identities=8% Similarity=-0.034 Sum_probs=50.3
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.+|+.++|+|...+|-.--.-. .+++++..|+..+... .+.++.+...+++.++..+++..
T Consensus 111 ~~Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 111 NLNISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcc
Confidence 3689999999999997665333 3678899999988874 68999999999999999988754
No 153
>PRK13383 acyl-CoA synthetase; Provisional
Probab=70.18 E-value=30 Score=29.48 Aligned_cols=66 Identities=6% Similarity=0.011 Sum_probs=52.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|+|...++-+-. +...+++++..|+..+..+ .+..+.+...+++.++..++..+.....+
T Consensus 80 ~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 146 (516)
T PRK13383 80 DGVAPGRAVGVMCRNGRG--FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERI 146 (516)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHH
Confidence 478899999988875554 3334778899999999886 46889999999999999999877665544
No 154
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=69.97 E-value=29 Score=29.44 Aligned_cols=65 Identities=8% Similarity=-0.086 Sum_probs=51.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~ 74 (228)
.++.++|++...++-+...-. .+++++..|+..+..+ ....+.+...+++.++..++..+..+..
T Consensus 45 ~g~~~~~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 110 (515)
T TIGR03098 45 LGLARGERVAIYLDKRLETVT--AMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDL 110 (515)
T ss_pred cCCCCCCEEEEEcCCCHHHHH--HHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhh
Confidence 477889999988887665333 3778899999988875 5789999999999999998887655443
No 155
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=69.89 E-value=37 Score=30.28 Aligned_cols=66 Identities=8% Similarity=-0.087 Sum_probs=52.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...++-..- +....++++..|+.++... ....+++..++++.++..+++....+..+
T Consensus 97 ~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 97 RGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSI 163 (660)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHH
Confidence 578999999999886654 3334678899999998875 57889999999999999999876655544
No 156
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=69.47 E-value=26 Score=28.59 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=52.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.+++++|++...+|-... +...+++++..|+.+++.+ ....+.+...+++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~--~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE--LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 578999999999987754 3334778899999999875 56888899999999999998887655443
No 157
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=69.15 E-value=34 Score=29.34 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=52.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
+++.++|++...++-+. .+...+++++..|+..+..+ ......+...+++.+++.++..+.....+
T Consensus 56 ~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 122 (546)
T PRK08314 56 CGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKV 122 (546)
T ss_pred hCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhH
Confidence 48899999999988654 34444788999999999875 46889999999999999998877655444
No 158
>PRK08316 acyl-CoA synthetase; Validated
Probab=69.13 E-value=33 Score=29.14 Aligned_cols=66 Identities=9% Similarity=-0.017 Sum_probs=52.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.+++++|++...+|-+.. +...+++++..|+..+..+ ..+.+.+...+++.++..++........+
T Consensus 56 ~gi~~~~~V~l~~~~~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~ 122 (523)
T PRK08316 56 LGLKKGDRVAALGHNSDA--YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTA 122 (523)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHH
Confidence 478899999998887665 3334778999999988886 46888999999999999998877665544
No 159
>PLN02654 acetate-CoA ligase
Probab=69.01 E-value=24 Score=31.48 Aligned_cols=62 Identities=11% Similarity=0.136 Sum_probs=50.7
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
..+++++|+|...+|-.-. +...+++++..|+..+.+. .+..+.+...+++.++..+++...
T Consensus 139 ~~Gv~~GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 139 DVGVKKGDAVVIYLPMLME--LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 4689999999999987664 3334788899999988874 689999999999999998887654
No 160
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.82 E-value=39 Score=28.62 Aligned_cols=66 Identities=8% Similarity=-0.072 Sum_probs=52.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++++++++...+|-+.. +...+++++..|+..+..+ ......+...++..++..++........+
T Consensus 51 ~g~~~~~~V~l~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~ 117 (521)
T PRK06187 51 LGVKKGDRVAVFDWNSHE--YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLL 117 (521)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHH
Confidence 578899999999887764 3334789999999998886 46788899999999999888877655443
No 161
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.64 E-value=34 Score=29.63 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=53.0
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
..++.++|++...+|-+.. +...+++++..|+.++..+ ..+.+.+...+.+.++..++........+
T Consensus 76 ~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 76 ALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred HhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 3578899999998887665 3344788899999999875 57899999999999999998877654433
No 162
>PRK07514 malonyl-CoA synthase; Validated
Probab=67.99 E-value=40 Score=28.55 Aligned_cols=65 Identities=8% Similarity=-0.024 Sum_probs=51.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~ 74 (228)
.++.++|++...++-... +...+++++..|+..+..+ ..+...+...++..+++.+...+.....
T Consensus 48 ~g~~~gd~v~i~~~~~~e--~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~ 113 (504)
T PRK07514 48 LGVKPGDRVAVQVEKSPE--ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAW 113 (504)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHH
Confidence 578899999988886654 3344789999999999875 4688889999999999998887765543
No 163
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=67.45 E-value=24 Score=26.14 Aligned_cols=88 Identities=16% Similarity=0.159 Sum_probs=51.7
Q ss_pred EEEEecc-hhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH---HHH---HHHhcCCCCCCCC
Q 027096 15 VFLCVLP-LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP---LIL---ALAKHGLVKKFDL 86 (228)
Q Consensus 15 ~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~---~~~---~l~~~~~~~~~~~ 86 (228)
+++...| =.|..|....-..--..|-.++... ...++.+.+.+.+.+++.+.++-+ .+. .+.+..+... ..
T Consensus 85 vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~~ 163 (201)
T cd02070 85 VVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-LR 163 (201)
T ss_pred EEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-CC
Confidence 4444444 2777777764444446777777554 568999999999999998765532 222 2222211111 01
Q ss_pred CCceEEEEcccCCCHHHH
Q 027096 87 SSLKLVGSGAAPLGKELM 104 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~ 104 (228)
..+ .+++||.+++++..
T Consensus 164 ~~~-~i~vGG~~~~~~~~ 180 (201)
T cd02070 164 DKV-KVMVGGAPVNQEFA 180 (201)
T ss_pred cCC-eEEEECCcCCHHHH
Confidence 133 47778888887643
No 164
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=67.10 E-value=45 Score=28.77 Aligned_cols=67 Identities=10% Similarity=-0.015 Sum_probs=53.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 76 (228)
.++.+++++...+|-.... ...+++.+..|+..+..+ ..+..++...+++.+++.++........+.
T Consensus 66 ~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 66 AGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALE 133 (542)
T ss_pred cCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHH
Confidence 5788999999988876654 333788999999999875 578899999999999999998877655543
No 165
>PLN02246 4-coumarate--CoA ligase
Probab=67.07 E-value=34 Score=29.35 Aligned_cols=65 Identities=9% Similarity=0.051 Sum_probs=50.4
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
..++.++|++...++-+.. +...+++++..|++.+..+ ......+...++..++..+........
T Consensus 69 ~~g~~~gd~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 134 (537)
T PLN02246 69 KLGIRQGDVVMLLLPNCPE--FVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVD 134 (537)
T ss_pred HhCCCCCCEEEEECCCChH--HHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHH
Confidence 3578899999988876643 4444788899999999885 467888999999999998877655444
No 166
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=66.20 E-value=39 Score=29.15 Aligned_cols=65 Identities=11% Similarity=0.089 Sum_probs=51.4
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
..+++++|++...+|-... +...+++++..|+..+..+ .+...++...+.+.+++.+........
T Consensus 70 ~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~ 135 (560)
T PRK08751 70 ELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGT 135 (560)
T ss_pred HhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHH
Confidence 4688999999998886654 3344788899999999775 578889999999999998887765443
No 167
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=66.17 E-value=28 Score=30.96 Aligned_cols=61 Identities=10% Similarity=-0.009 Sum_probs=49.6
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
..++.++|+|...+|-.-..-. .+++++..|+..+... .+..+.+...+++.++..+++..
T Consensus 133 ~~Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 133 ALGVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 3589999999999997665333 3678899999988875 57899999999999998888654
No 168
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=65.81 E-value=30 Score=30.49 Aligned_cols=61 Identities=10% Similarity=0.006 Sum_probs=49.5
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
..++.++|+|...+|-.-. ....+++++..|+..+... .+....+...+++.++..+++..
T Consensus 102 ~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 102 ALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECC
Confidence 3589999999999987654 3334788999999988874 57899999999999999888753
No 169
>PLN02574 4-coumarate--CoA ligase-like
Probab=65.46 E-value=44 Score=28.92 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=52.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...++-+.. +...++.++..|+..+..+ ......+...+...++..++..+.....+
T Consensus 87 ~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 87 MGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred hCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 688999999999886543 3344788999999999886 46788899999999999888877665544
No 170
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=64.99 E-value=23 Score=21.45 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccCCCHHHHHHHHHhCCCCeE
Q 027096 51 EMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATV 116 (228)
Q Consensus 51 ~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l 116 (228)
..+++.+.+++++.+.- ..+.+++.+.+.+.......+.+.+.+.||++.+
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 45788888888887653 2334677778877777778888899899987655
No 171
>PRK09274 peptide synthase; Provisional
Probab=64.52 E-value=33 Score=29.56 Aligned_cols=60 Identities=7% Similarity=0.096 Sum_probs=47.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.+++++|++...++-+.. +...+++++..|+..+..+ ....+.+...+++.++..+...+
T Consensus 61 ~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 61 AGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred cCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEecc
Confidence 578999999999886654 3344788899999999885 46788888999999988887654
No 172
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.06 E-value=53 Score=27.80 Aligned_cols=64 Identities=8% Similarity=0.122 Sum_probs=50.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
.+++++|++...+|-.... ...+++.+..|+..+..+ ..+...+.+.+++.++..++..+....
T Consensus 50 ~gv~~g~~V~l~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 114 (513)
T PRK07656 50 LGIGKGDRVAIWAPNSPHW--VIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLG 114 (513)
T ss_pred cCCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHH
Confidence 5788899999888866543 333678899999999875 468888999999999999988765443
No 173
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=63.22 E-value=62 Score=24.31 Aligned_cols=89 Identities=16% Similarity=0.138 Sum_probs=56.0
Q ss_pred cEEEEecch-hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHH---HH---HHHhcCCCCCCC
Q 027096 14 YVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL---IL---ALAKHGLVKKFD 85 (228)
Q Consensus 14 d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~---~~---~l~~~~~~~~~~ 85 (228)
.+++...+- .|..|....-..--.+|-.++... ...++.+.+.+.+.+++++.++-.. .. .+.+..+...
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~-- 167 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG-- 167 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC--
Confidence 344444442 777777765455556777777775 4689999999999999987655322 22 2222221111
Q ss_pred CCCceEEEEcccCCCHHHHHH
Q 027096 86 LSSLKLVGSGAAPLGKELMEE 106 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~~~~ 106 (228)
..+ .+++||.+++++..+.
T Consensus 168 -~~~-~i~vGG~~~~~~~~~~ 186 (213)
T cd02069 168 -IKI-PLLIGGAATSRKHTAV 186 (213)
T ss_pred -CCC-eEEEEChhcCHHHHhh
Confidence 134 3777899999888765
No 174
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=63.20 E-value=53 Score=27.97 Aligned_cols=65 Identities=8% Similarity=-0.041 Sum_probs=51.9
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
..++.++|++....+-+...- ..+++++..|+.++..+ ..+.+.+...+++.++..++..+....
T Consensus 56 ~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 56 SLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 358889999999988776543 33678899999988875 578999999999999999988776443
No 175
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=63.15 E-value=59 Score=28.43 Aligned_cols=66 Identities=12% Similarity=0.065 Sum_probs=51.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.+++++|++...++-+.. +...+++++..|+.++..+ ....+.+...+++.++..++........+
T Consensus 82 ~g~~~gd~V~i~~~n~~~--~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 82 RGVGKGDVVALLMENRPE--YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 578899999998887665 3344788999999998875 46788899999999999988776554433
No 176
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=62.70 E-value=34 Score=30.08 Aligned_cols=62 Identities=10% Similarity=0.050 Sum_probs=50.0
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.+++.++|++...+|-+-.+ ...+++++..|+..+... .+.++.+...+++.++..++....
T Consensus 107 ~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 107 SLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 36889999999999876543 333778899999988874 578999999999999998887653
No 177
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=62.05 E-value=28 Score=30.02 Aligned_cols=66 Identities=15% Similarity=0.098 Sum_probs=50.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
+.-.++|++...+|-+..+ ...+++++..|+.++.++ ....+++...++..+++.+.+....+..+
T Consensus 62 L~~~~gd~Val~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 128 (539)
T PRK06334 62 VSKYPDQHIGIMMPASAGA--YIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHL 128 (539)
T ss_pred HhhccCCeEEEEcCCchHH--HHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHH
Confidence 3335889999998876653 334789999999999886 46788899999999999888876655443
No 178
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=62.05 E-value=38 Score=30.05 Aligned_cols=60 Identities=12% Similarity=0.006 Sum_probs=48.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...+|-+-.. ...+++++..|+..+... .+..+.+...++..++..+++..
T Consensus 134 ~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 134 LGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred cCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEcc
Confidence 5889999999999876543 334788999999988875 57889999999999998888754
No 179
>PRK07798 acyl-CoA synthetase; Validated
Probab=61.49 E-value=69 Score=27.24 Aligned_cols=66 Identities=2% Similarity=-0.131 Sum_probs=50.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...++-... +...+++.+..|+..+..+ ....+.+...+++.++..++........+
T Consensus 48 ~g~~~~~~v~v~~~n~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 114 (533)
T PRK07798 48 QGLGPGDHVGIYARNRIE--YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRV 114 (533)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHH
Confidence 578899999888876554 3344778899999998875 46888899999999999888776554443
No 180
>PLN03052 acetate--CoA ligase; Provisional
Probab=61.34 E-value=41 Score=30.48 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=50.6
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
..++.++|+|...+|-+--.- ..+++++..|+..+.+. .+.++.+...+++.++..++....
T Consensus 227 ~~Gv~~GdrVai~~pn~~e~v--ia~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 227 ALGFEKGDAIAIDMPMNVHAV--IIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred HcCCCCCCEEEEEeCCCHHHH--HHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 368999999999999765533 33778899999988874 688999999999999998887654
No 181
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=61.01 E-value=50 Score=25.58 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=50.4
Q ss_pred HHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccC-CCHHHHHHHHHh
Q 027096 32 TCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKN 110 (228)
Q Consensus 32 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~-l~~~~~~~~~~~ 110 (228)
-+..++..+.++++++.........+...+...-.....++..+++.+... ..+..+.||.+ +.....+.+++.
T Consensus 57 e~~~~i~~A~li~pDG~gvV~~ar~~~g~~~~~rv~G~Dl~~~Ll~~a~~~-----~~~vfllGgkp~V~~~a~~~l~~~ 131 (253)
T COG1922 57 EFREILNQADLILPDGIGVVRAARRLLGQPLPERVAGTDLVEALLKRAAEE-----GKRVFLLGGKPGVAEQAAAKLRAK 131 (253)
T ss_pred HHHHHHhhcCEEccCchhHHHHHHHHhCccCcccCChHHHHHHHHHHhCcc-----CceEEEecCCHHHHHHHHHHHHHH
Confidence 456677788888887766555554443333322222344566666553322 47778888876 667777788888
Q ss_pred CCCCeEE
Q 027096 111 VPSATVI 117 (228)
Q Consensus 111 ~~~~~l~ 117 (228)
+|+..+.
T Consensus 132 ~p~l~iv 138 (253)
T COG1922 132 YPGLKIV 138 (253)
T ss_pred CCCceEE
Confidence 9877655
No 182
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=60.95 E-value=40 Score=29.70 Aligned_cols=61 Identities=11% Similarity=0.051 Sum_probs=49.1
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
..++.++|++...+|-.-.. ...+++++..|+..+... .+....+...+++.++..+++..
T Consensus 103 ~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 103 SLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 35889999999999876653 333778899999988874 57889999999999999888754
No 183
>PRK08162 acyl-CoA synthetase; Validated
Probab=60.76 E-value=52 Score=28.23 Aligned_cols=66 Identities=9% Similarity=0.057 Sum_probs=52.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...+|-+.. +...+++.+..|+..+..+ ..+...+...+++.+++.++..+.....+
T Consensus 63 ~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 129 (545)
T PRK08162 63 RGIGRGDTVAVLLPNIPA--MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVA 129 (545)
T ss_pred hCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHH
Confidence 478899999988887664 3344778899999988875 57889999999999999998877655433
No 184
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.49 E-value=58 Score=28.21 Aligned_cols=63 Identities=10% Similarity=0.093 Sum_probs=50.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...+|-+.. +...+++++..|+..+..+ .+..+++...+++.++..++......
T Consensus 70 ~gi~~gd~Vai~~~n~~~--~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 133 (562)
T PRK05677 70 TDLKPGDRIAVQLPNVLQ--YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMA 133 (562)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchh
Confidence 478899999999887665 3334788999999999885 46888999999999999888765443
No 185
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=59.87 E-value=63 Score=29.08 Aligned_cols=68 Identities=7% Similarity=-0.098 Sum_probs=52.9
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 76 (228)
.+++.++|++...++-... +....++++..|+..+... ..+++.+...+++.++..+++....+..+.
T Consensus 140 ~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~ 208 (700)
T PTZ00216 140 ELGLTKGSNVAIYEETRWE--WLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLL 208 (700)
T ss_pred HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHH
Confidence 3588999999998886654 3444778899999888764 578899999999999999998776555443
No 186
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=59.69 E-value=42 Score=29.10 Aligned_cols=60 Identities=8% Similarity=-0.099 Sum_probs=48.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...+|-+.. +...+++++..|+.++..+ ....+++...+++.+++.+...+
T Consensus 52 ~Gv~~gd~V~v~~~n~~~--~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~ 112 (563)
T PLN02860 52 LGLRNGDVVAIAALNSDL--YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDE 112 (563)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEec
Confidence 578999999999887665 3333678899999999885 47889999999999998888754
No 187
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=59.41 E-value=84 Score=26.69 Aligned_cols=66 Identities=11% Similarity=0.131 Sum_probs=50.9
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~ 74 (228)
..++++++++...++-.. .+...+++++..|+..+..+ ..+...+...+++.+++.++........
T Consensus 49 ~~g~~~g~~v~l~~~~~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 115 (508)
T TIGR02262 49 RLGVKREERVLLLMLDGV--DFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPV 115 (508)
T ss_pred HcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHH
Confidence 357888998888776554 34445788999999988875 4788999999999999999887655443
No 188
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=58.58 E-value=4.8 Score=16.46 Aligned_cols=9 Identities=67% Similarity=1.232 Sum_probs=6.5
Q ss_pred cccccccCC
Q 027096 119 GYGLTETSG 127 (228)
Q Consensus 119 ~yG~tE~g~ 127 (228)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 189
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=58.52 E-value=66 Score=27.34 Aligned_cols=66 Identities=9% Similarity=0.049 Sum_probs=52.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...+|-... +...+++.+..|+..+..+ ......+...++..+++.++........+
T Consensus 31 ~g~~~g~~V~v~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 97 (509)
T PRK12406 31 LGVRPGDCVALLMRNDFA--FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLLHGL 97 (509)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchhhhh
Confidence 578899999988887665 3344778899999999885 46889999999999999998876655544
No 190
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.19 E-value=54 Score=28.51 Aligned_cols=66 Identities=11% Similarity=-0.042 Sum_probs=52.1
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...++-+... ...+++.+..|+..+..+ ......+...++..++..+++.+.....+
T Consensus 59 ~g~~~gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 59 LGITGDQRVGSMMYNCAEH--LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred cCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 5788999999888866543 333678899999988885 46788999999999999998877655543
No 191
>PRK05857 acyl-CoA synthetase; Validated
Probab=58.00 E-value=51 Score=28.38 Aligned_cols=62 Identities=8% Similarity=-0.045 Sum_probs=49.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~ 71 (228)
.++.++|++...++-+..+- ..+++.+..|+..+..+ ....+.+..+++..++..++..+..
T Consensus 61 ~g~~~g~~V~i~~~~~~e~~--~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 61 QSVSRGSRVLVISDNGPETY--LSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred hCcCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccc
Confidence 57889999999888776533 33788999999999886 4688889999998888888876643
No 192
>PRK13388 acyl-CoA synthetase; Provisional
Probab=57.96 E-value=75 Score=27.38 Aligned_cols=64 Identities=6% Similarity=-0.097 Sum_probs=49.4
Q ss_pred ccC-CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 8 TAG-ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 8 ~~~-~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
.++ .++|++...++-+.. +...+++++..|+..+..+ .+..+.+...+++.++..++.......
T Consensus 46 ~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~ 111 (540)
T PRK13388 46 LADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRP 111 (540)
T ss_pred hcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhH
Confidence 356 688999888886655 3334788999999999875 467889999999999998887665443
No 193
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=57.77 E-value=51 Score=29.13 Aligned_cols=60 Identities=8% Similarity=0.021 Sum_probs=49.0
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...+|-....-. .+++++..|+..+... .+..+.+...+++.++..++...
T Consensus 118 ~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 118 LGVKKGDRVAIYMPMIPEAAV--AMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred cCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 578999999999887665333 3678899999998875 57899999999999999888654
No 194
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.36 E-value=66 Score=27.25 Aligned_cols=66 Identities=9% Similarity=-0.042 Sum_probs=51.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.+++++|++...++-+...-. .+++++..|+..+..+ .+....+...+++.+++.++..+.....+
T Consensus 31 ~g~~~~~~V~i~~~~~~~~~~--~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 31 LGLREGDVVAILLENNPEFFE--VYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALADTA 97 (502)
T ss_pred hCCCCCCEEEEEeCCCHHHHH--HHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchhhHH
Confidence 578899999999887655333 3788999999999875 46788899999999999888877655443
No 195
>PRK06178 acyl-CoA synthetase; Validated
Probab=57.12 E-value=76 Score=27.46 Aligned_cols=66 Identities=11% Similarity=0.106 Sum_probs=52.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++++++++...++-... +...+++++..|+..+..+ ......+...+++.++..++..+.....+
T Consensus 78 ~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l 144 (567)
T PRK06178 78 RGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVV 144 (567)
T ss_pred cCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 578899999988887665 3334778899999988775 56888999999999999999888765544
No 196
>PRK07470 acyl-CoA synthetase; Validated
Probab=57.05 E-value=76 Score=27.12 Aligned_cols=63 Identities=5% Similarity=-0.093 Sum_probs=49.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...++-... +...+++++..|+..+..+ ......+...+++.+++.++..+...
T Consensus 52 ~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 115 (528)
T PRK07470 52 RGVRKGDRILVHSRNCNQ--MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFP 115 (528)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhH
Confidence 578899999888876664 3344678899999988875 46888999999999999988876543
No 197
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=56.70 E-value=54 Score=28.20 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=47.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEec
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~ 68 (228)
.++.++|++...+|-+.. +...+++++..|+..+..+ ....+++...++..++..+++.
T Consensus 69 ~G~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 69 KGIEPGDRVAFQLPGWCE--FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEe
Confidence 578899999998886654 3344789999999988875 4678889999999998887764
No 198
>PRK13382 acyl-CoA synthetase; Provisional
Probab=56.22 E-value=91 Score=26.82 Aligned_cols=63 Identities=10% Similarity=-0.008 Sum_probs=50.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...++-+.. +...+++.+..|+.++..+ .....++...+++.+++.++......
T Consensus 88 ~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (537)
T PRK13382 88 LPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS 151 (537)
T ss_pred cCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH
Confidence 578899999988886654 4445789999999999886 46788899999999999888765543
No 199
>PLN02479 acetate-CoA ligase
Probab=55.77 E-value=89 Score=27.11 Aligned_cols=63 Identities=8% Similarity=0.077 Sum_probs=50.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...+|-+-. +...+++.+..|+..+..+ .+...++...+++.++..+++.+..+
T Consensus 65 ~g~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 65 RSIGPGSTVAVIAPNIPA--MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred cCCCCCCEEEEECCCcHH--HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhh
Confidence 478999999988886554 3334778899999988885 47888999999999999998876654
No 200
>PRK07867 acyl-CoA synthetase; Validated
Probab=55.57 E-value=68 Score=27.58 Aligned_cols=64 Identities=6% Similarity=-0.098 Sum_probs=49.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
.+..+++++...++-... +...+++++..|+.++..+ ....+.+...+++.++..++.......
T Consensus 49 ~~~~~~~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 113 (529)
T PRK07867 49 LDPTRPPHVGVLLDNTPE--FSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE 113 (529)
T ss_pred hCCCCCCEEEEECCCCHH--HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH
Confidence 356778888877775443 3344778999999999875 468889999999999999888876554
No 201
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=55.16 E-value=6.5 Score=23.07 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=11.8
Q ss_pred CCCCeEEecccccccCCc
Q 027096 111 VPSATVIQGYGLTETSGI 128 (228)
Q Consensus 111 ~~~~~l~~~yG~tE~g~~ 128 (228)
+.+.+++..|||+|..-+
T Consensus 25 l~~~~yvPfyGSSEl~r~ 42 (62)
T PF04915_consen 25 LKDPKYVPFYGSSELSRF 42 (62)
T ss_dssp HSSS-EEEEE-SSTTTS-
T ss_pred hcCCCeeeecCcHHHhcc
Confidence 346789999999996543
No 202
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=55.06 E-value=71 Score=26.34 Aligned_cols=61 Identities=10% Similarity=-0.034 Sum_probs=48.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++.++|++...+|-+.. ....+++.+..|+..++.+ ..+...+...+++.++..+...+.
T Consensus 19 ~g~~~gd~v~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 19 QGIRSGSRVALVGQNSIE--MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578899999999887754 3344789999999999886 467888999999999988876554
No 203
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=54.95 E-value=59 Score=28.03 Aligned_cols=64 Identities=14% Similarity=0.059 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
.++.++|++...+|-....- ..+++++..|+..+..+ ....+++...+++.++..+...+..+.
T Consensus 75 ~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 75 LGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred hCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 57888999998888766533 33678899999988775 457888999999999988877655443
No 204
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=54.44 E-value=41 Score=28.61 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=41.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC----CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA----KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
+-.+++|+++.--|.++.+-- ..-..|..++-++ +.+++.+.+.++++++..++++|+
T Consensus 174 ~l~~pGd~v~vE~PtY~~~~~-----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 174 LLLDPGDTVLVEDPTYPGALQ-----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred HhCCCCCEEEEcCCCcHHHHH-----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 345588888888887775222 2234577777664 468888888888888999998886
No 205
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=53.81 E-value=44 Score=19.61 Aligned_cols=34 Identities=21% Similarity=0.495 Sum_probs=25.9
Q ss_pred eEEEEecCcccccccccccCCCeEEcCceEEEcCCCcEEEec
Q 027096 170 GEIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGDGQLYVVD 211 (228)
Q Consensus 170 Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~G 211 (228)
|.+|++-.. ...|-|...||..++...+.+++.+
T Consensus 25 G~vWlT~~g--------~~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREG--------DPDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCC--------CCCCEEECCCCEEEeCCCCEEEEEe
Confidence 888886533 1256699999999998888887765
No 206
>PTZ00297 pantothenate kinase; Provisional
Probab=53.65 E-value=1.5e+02 Score=29.63 Aligned_cols=81 Identities=9% Similarity=0.006 Sum_probs=60.3
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCC
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 86 (228)
.+|+.++|+|...++-..- +....++++..|+..+.... +...+..++++.++.++++....+..+.+...
T Consensus 476 ~lGV~~GDrVaIls~N~~E--wvia~lA~~~~GaV~VPly~-t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~------ 546 (1452)
T PTZ00297 476 ALGVRPGDVIGVDCEASRN--IVILEVACALYGFTTLPLVG-KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS------ 546 (1452)
T ss_pred HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEeCCC-CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc------
Confidence 3689999999988886544 33336788999999998753 56789999999999999998877776654311
Q ss_pred CCceEEEEcc
Q 027096 87 SSLKLVGSGA 96 (228)
Q Consensus 87 ~~lr~~~~~G 96 (228)
+.++.+++-.
T Consensus 547 ~~Lr~IIv~d 556 (1452)
T PTZ00297 547 RKLETVVYTH 556 (1452)
T ss_pred cCCcEEEEEC
Confidence 2577777654
No 207
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=53.58 E-value=61 Score=27.90 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=48.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...+|-+... ...+++++..|+..+..+ ....+.+...++..++..+.+..
T Consensus 75 ~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 75 LGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred hCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEec
Confidence 5788999999998876654 333778999999998875 46788899999999998887654
No 208
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=53.55 E-value=87 Score=27.02 Aligned_cols=63 Identities=10% Similarity=0.109 Sum_probs=49.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...++-+...- ..+++++..|+..+..+ ....+.+...+++.+++.+.......
T Consensus 68 ~gi~~gd~V~i~~~n~~~~~--~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 131 (557)
T PRK07059 68 RGLAKGARVAIMMPNVLQYP--VAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFA 131 (557)
T ss_pred hCCCCCCEEEEECCCCHHHH--HHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhH
Confidence 47889999998888665433 33678899999999875 46788999999999999888766543
No 209
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=52.63 E-value=1.1e+02 Score=25.63 Aligned_cols=63 Identities=10% Similarity=0.054 Sum_probs=49.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...+|-+.. +...+++++..|+..+..+. .+...+...+++.++..+.......
T Consensus 47 ~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 110 (483)
T PRK03640 47 LGVKKGDRVALLMKNGME--MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFE 110 (483)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhh
Confidence 467899999999887765 34447899999999998864 6888899999998888877655433
No 210
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=52.61 E-value=84 Score=26.82 Aligned_cols=49 Identities=8% Similarity=-0.017 Sum_probs=34.0
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++...|+.+-..+.. .+..+|..|.++++-+.. ....+.+++.+.
T Consensus 135 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 188 (478)
T cd07131 135 PIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEA 188 (478)
T ss_pred ceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhc
Confidence 3458899999877654433 467899999999998642 344566666663
No 211
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=52.44 E-value=42 Score=29.16 Aligned_cols=67 Identities=7% Similarity=-0.117 Sum_probs=53.8
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
+..+. ++|++...+|..-..... +++++--|+....+ +.+.++.+...+.+..+.++......++..
T Consensus 59 ~~~gv-kGDrV~iymp~~pe~~~a--~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 59 DLGGV-KGDRVAIYMPNSPEAVIA--LLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred HhCCC-CCCEEEEEcCCCHHHHHH--HHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEeccccccc
Confidence 44567 999999999988764443 67888899987776 578999999999999999998777665544
No 212
>PRK08315 AMP-binding domain protein; Validated
Probab=52.23 E-value=75 Score=27.35 Aligned_cols=61 Identities=8% Similarity=0.027 Sum_probs=48.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++.++|++....+-... +...+++.+..|+..+..+ ..+...+...++..+++.++....
T Consensus 63 ~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 124 (559)
T PRK08315 63 LGIEKGDRVGIWAPNVPE--WVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADG 124 (559)
T ss_pred cCCCCCCEEEEECCCChH--HHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEecc
Confidence 478899999988887654 3344789999999999875 467888999999999998877653
No 213
>PRK09088 acyl-CoA synthetase; Validated
Probab=52.14 E-value=75 Score=26.78 Aligned_cols=61 Identities=3% Similarity=-0.082 Sum_probs=48.1
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
..++.++|++...++-+.. +...+++++..|+..+..+ ....+.+...+++.+++.++...
T Consensus 41 ~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 41 RRGCVDGERLAVLARNSVW--LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcc
Confidence 3578899999988887665 3333678899999988875 56888899999999998887654
No 214
>PRK06164 acyl-CoA synthetase; Validated
Probab=51.34 E-value=71 Score=27.39 Aligned_cols=62 Identities=13% Similarity=0.109 Sum_probs=49.3
Q ss_pred cccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 7 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
..++.++|++...++-+.. +...+++.+..|+..+..+ ..+...+...+++.+++.++..+.
T Consensus 54 ~~g~~~g~~V~i~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 54 AQGVRRGDRVAVWLPNCIE--WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred HhCCCCCCEEEEEcCCcHH--HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccc
Confidence 3578899999988887765 3334778899999999886 467888999999999998887654
No 215
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=50.83 E-value=1e+02 Score=26.61 Aligned_cols=58 Identities=16% Similarity=0.118 Sum_probs=38.1
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
|--+++..+|+.+-..+ ...+..+|..|.++++-+.. ....+.+++.+. ....+.+++
T Consensus 166 P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~ 230 (512)
T cd07124 166 PLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLP 230 (512)
T ss_pred cceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEec
Confidence 44688999998774433 34578999999999998642 344566666653 334444443
No 216
>PRK12583 acyl-CoA synthetase; Provisional
Probab=50.42 E-value=84 Score=27.02 Aligned_cols=61 Identities=7% Similarity=-0.007 Sum_probs=48.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++.++|++...+|-+.. +...+++++..|+..+..+ ..+.+.+...+++.+++.+++.+.
T Consensus 65 ~gi~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 65 LGVQPGDRVGIWAPNCAE--WLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred hCCCCCCEEEEECCCChH--HHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEecc
Confidence 578899999888876654 3334778899999988775 578999999999999998887653
No 217
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=50.40 E-value=79 Score=27.19 Aligned_cols=63 Identities=8% Similarity=-0.110 Sum_probs=49.0
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.++.++|++...++-....-. .+++.+..|+..+..+ ....+.+...++..++..++......
T Consensus 59 ~g~~~gd~v~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 122 (542)
T PRK06018 59 DGIKLGDRVATIAWNTWRHLE--AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV 122 (542)
T ss_pred cCCCCCCEEEEEcCCchHHHH--HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccH
Confidence 578899999988886665333 3678889999988875 46788999999999999888765443
No 218
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.31 E-value=1.2e+02 Score=26.13 Aligned_cols=63 Identities=5% Similarity=-0.069 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
.+++++|++...++-... +...+++.+..|+..+..+ .....++...+++.++..++..+...
T Consensus 62 ~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~ 125 (542)
T PRK07786 62 RGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA 125 (542)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH
Confidence 478899999888886554 3334788899999999885 46788899999999998888776544
No 219
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=50.20 E-value=1.6e+02 Score=24.97 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=46.4
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech----HHHHHHHhcCC
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGL 80 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p----~~~~~l~~~~~ 80 (228)
|--+++..+|+.+-..+ ...+..+|..|.++++-+.. ....+.+++.+. ....+..++ .....|+.+
T Consensus 117 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~-- 194 (454)
T cd07109 117 PHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAH-- 194 (454)
T ss_pred eeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcC--
Confidence 33488889988766433 33467999999999998642 344566777663 334444433 234445443
Q ss_pred CCCCCCCCceEEEEcc
Q 027096 81 VKKFDLSSLKLVGSGA 96 (228)
Q Consensus 81 ~~~~~~~~lr~~~~~G 96 (228)
+.++.+.+.|
T Consensus 195 ------~~v~~v~ftG 204 (454)
T cd07109 195 ------PGVDHISFTG 204 (454)
T ss_pred ------CCCCEEEEEC
Confidence 2355555555
No 220
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=50.19 E-value=76 Score=27.48 Aligned_cols=61 Identities=8% Similarity=0.049 Sum_probs=48.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++.++|++...++-+.. +...+++++..|+..+..+ ......+...+++.++..+...+.
T Consensus 70 ~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~ 131 (562)
T PRK12492 70 TDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNM 131 (562)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccc
Confidence 478899999998886664 3344788899999988875 468889999999999988876554
No 221
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.08 E-value=1e+02 Score=26.56 Aligned_cols=64 Identities=6% Similarity=-0.171 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
.++.++|++...+|-... +...+++.+..|+.++..+ ...++.+...++..++..+...+.+..
T Consensus 59 ~g~~~~d~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 123 (539)
T PRK07008 59 LGVEPGDRVGTLAWNGYR--HLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLP 123 (539)
T ss_pred cCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHH
Confidence 578899999998886653 3333678889999998885 468888999999999988877765443
No 222
>PRK06188 acyl-CoA synthetase; Validated
Probab=49.51 E-value=91 Score=26.59 Aligned_cols=61 Identities=8% Similarity=-0.094 Sum_probs=48.6
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++.+++++...++-+... ...+++.+..|+..+..+ ..+...+...++..+++.+...+.
T Consensus 57 ~gv~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 118 (524)
T PRK06188 57 LGLGTGDAVALLSLNRPEV--LMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPA 118 (524)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecc
Confidence 5788999999888766643 333678899999999875 467888999999999998887765
No 223
>PRK06060 acyl-CoA synthetase; Validated
Probab=49.31 E-value=1.1e+02 Score=27.56 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=48.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~ 71 (228)
.++.++|++...++-+.. +...+++.+..|+..+..+ ......+...+++.++..+......
T Consensus 50 ~g~~~g~~V~i~~~~~~~--~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~ 112 (705)
T PRK06060 50 RGLSSGDRVLLCLPDSPD--LVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDAL 112 (705)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHH
Confidence 578899999999887665 3334778899999988875 4677888888888888888765543
No 224
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=49.25 E-value=87 Score=29.87 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=40.2
Q ss_pred CCCcEEEEecchhhH-HhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh--cCceEEEechH
Q 027096 11 ELDYVFLCVLPLFHV-FGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEK--HRVTHIWVVPP 70 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~-~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~--~~~t~l~~~p~ 70 (228)
.+--++++.+|+.+- ......+..+|..|.++++-|.. ....+.+++.+ .....+.++|.
T Consensus 683 ~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G 749 (1038)
T PRK11904 683 HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPG 749 (1038)
T ss_pred ecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeC
Confidence 456788999999773 33344578999999999997642 23445666665 34556665553
No 225
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.98 E-value=88 Score=27.04 Aligned_cols=62 Identities=10% Similarity=0.129 Sum_probs=49.0
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~ 71 (228)
.++.++|++....+-... +...+++++..|+..+.++ ....+.+...+++.++..+...+..
T Consensus 69 ~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~ 131 (560)
T PRK08974 69 LGLKKGDRVALMMPNLLQ--YPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNF 131 (560)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccc
Confidence 578899999988876544 3344778999999999885 4678889999999999988876543
No 226
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=48.54 E-value=1.4e+02 Score=26.29 Aligned_cols=63 Identities=11% Similarity=0.002 Sum_probs=48.7
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CC-CC--HHHHHHHHHhcCceEEEechHHHHH
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AK-FD--LEMFLRAIEKHRVTHIWVVPPLILA 74 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~-~~--~~~~~~~i~~~~~t~l~~~p~~~~~ 74 (228)
+.++|++...++-... +...+++++..|+.++.. +. .. .+.+...+++.++..+++.+.....
T Consensus 89 ~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 89 AGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred cCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 6889999999987754 444478999999998876 33 22 6788999999999999987765543
No 227
>PRK07529 AMP-binding domain protein; Validated
Probab=48.33 E-value=75 Score=28.13 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=44.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEec
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVV 68 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~ 68 (228)
+++.++|++...+|-+... ...+++++..|.. +.+ +..+++.+..++++.++..++..
T Consensus 78 ~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~-~pi~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 78 LGVGPGDVVAFLLPNLPET--HFALWGGEAAGIA-NPINPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEE-EeCCCcCCHHHHHHHHHhcCCcEEEEe
Confidence 5889999999999976653 3336777888854 444 45789999999999999988875
No 228
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.81 E-value=83 Score=27.21 Aligned_cols=62 Identities=11% Similarity=0.056 Sum_probs=48.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~ 71 (228)
.++.++|++...++-+... ...+++.+..|+..+.++ .....++...++..+++.+.+.+..
T Consensus 69 ~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~ 131 (563)
T PRK06710 69 LGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLV 131 (563)
T ss_pred cCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccc
Confidence 4678899999888876653 334778899999888875 4678889999999999988877643
No 229
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=47.79 E-value=1.2e+02 Score=22.85 Aligned_cols=84 Identities=17% Similarity=0.258 Sum_probs=54.5
Q ss_pred HHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEE--EechHHHHHHHhcCCCCCCCCCCceEEEEcccCC-CHHHHHHHH
Q 027096 32 TCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHI--WVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPL-GKELMEECA 108 (228)
Q Consensus 32 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l--~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l-~~~~~~~~~ 108 (228)
.-.++-.|+..++.|.+++ .+.+...++.+.++ .++|+-+....+..- .-+|. += ++.+ .++..+.++
T Consensus 80 a~~a~~aGA~FivsP~~~~-~vi~~a~~~~i~~iPG~~TptEi~~a~~~Ga------~~vKl-FP-a~~~gg~~~lk~l~ 150 (212)
T PRK05718 80 LAQAIEAGAQFIVSPGLTP-PLLKAAQEGPIPLIPGVSTPSELMLGMELGL------RTFKF-FP-AEASGGVKMLKALA 150 (212)
T ss_pred HHHHHHcCCCEEECCCCCH-HHHHHHHHcCCCEeCCCCCHHHHHHHHHCCC------CEEEE-cc-chhccCHHHHHHHh
Confidence 4467888999999998888 77777777888877 466776665544321 11222 22 2222 577788888
Q ss_pred HhCCCCeEEecccccc
Q 027096 109 KNVPSATVIQGYGLTE 124 (228)
Q Consensus 109 ~~~~~~~l~~~yG~tE 124 (228)
..||+.++...=|-++
T Consensus 151 ~p~p~~~~~ptGGV~~ 166 (212)
T PRK05718 151 GPFPDVRFCPTGGISP 166 (212)
T ss_pred ccCCCCeEEEeCCCCH
Confidence 8888888776655443
No 230
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=47.49 E-value=1.3e+02 Score=23.10 Aligned_cols=85 Identities=15% Similarity=0.226 Sum_probs=56.3
Q ss_pred hhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccC-------CCHHHHHHHH
Q 027096 36 LQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-------LGKELMEECA 108 (228)
Q Consensus 36 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~-------l~~~~~~~~~ 108 (228)
+--|.++++-.+.+...+.+.|.+..+|++.-.+..+..+... ++++.++.||+. ..+...+.+.
T Consensus 91 I~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l~ 162 (240)
T PRK10411 91 IEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQLK 162 (240)
T ss_pred CCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHHH
Confidence 4446666666667777888888766677777667777766443 346778888853 3355666666
Q ss_pred HhCCCCeEEecccccccCCc
Q 027096 109 KNVPSATVIQGYGLTETSGI 128 (228)
Q Consensus 109 ~~~~~~~l~~~yG~tE~g~~ 128 (228)
+...+.-++..-|.++.+++
T Consensus 163 ~~~~d~afis~~gi~~~~G~ 182 (240)
T PRK10411 163 SLEIDLFIFSCEGIDSSGAL 182 (240)
T ss_pred hcCCCEEEEeceeECCCCCc
Confidence 65446778888887644443
No 231
>PRK05850 acyl-CoA synthetase; Validated
Probab=47.41 E-value=1e+02 Score=26.73 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=49.3
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++|++...++-+.. +...+++.+..|+.++..+. .+.+.+...++..++..++..+.....+
T Consensus 57 ~~gd~V~l~~~n~~~--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 57 STGDRAVILAPQGLE--YIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCEEEEEcCCccc--HHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 468999988886654 44447889999999998863 3567899999999999999887765554
No 232
>PRK05852 acyl-CoA synthetase; Validated
Probab=46.96 E-value=98 Score=26.54 Aligned_cols=58 Identities=2% Similarity=-0.126 Sum_probs=46.4
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEe
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV 67 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 67 (228)
.++.++|++...+|-+.. +...+++.+..|+.++..+ ..+...+...++..++..++.
T Consensus 63 ~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 63 SGLLPGDRVALRMGSNAE--FVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cCCCCCCEEEEECCCcHH--HHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 578899999988886554 3334788999999999875 467888999999999998874
No 233
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=46.90 E-value=35 Score=24.84 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=39.1
Q ss_pred hcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccC-CCHHHHHHHHHhCCCCe
Q 027096 37 QKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKNVPSAT 115 (228)
Q Consensus 37 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~-l~~~~~~~~~~~~~~~~ 115 (228)
++.+.++++++.......+.+....+.- ..-+.++..+++.... ...+..++||.+ +-....+.+++.+|+..
T Consensus 3 ~~~ad~v~~DG~~iv~~~r~~g~~~~~R-v~G~dl~~~l~~~~~~-----~~~~vfllG~~~~v~~~~~~~l~~~yP~l~ 76 (177)
T TIGR00696 3 INQAELVTPDGIGVVWGLKLLGYPQQSR-VAGPDLMEELCQRAGK-----EKLPIFLYGGKPDVLQQLKVKLIKEYPKLK 76 (177)
T ss_pred HHhCCEEecCcHHHHHHHHHcCCCCCCc-cChHHHHHHHHHHHHH-----cCCeEEEECCCHHHHHHHHHHHHHHCCCCE
Confidence 4455666666543333333332111111 2245666666664322 225667777654 44555677777778776
Q ss_pred EE
Q 027096 116 VI 117 (228)
Q Consensus 116 l~ 117 (228)
+.
T Consensus 77 i~ 78 (177)
T TIGR00696 77 IV 78 (177)
T ss_pred EE
Confidence 54
No 234
>PRK12582 acyl-CoA synthetase; Provisional
Probab=46.74 E-value=79 Score=27.90 Aligned_cols=60 Identities=7% Similarity=-0.002 Sum_probs=45.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CC-----HHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-----LEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...++-... +...+++++..|+..+..+. ++ .+++...+++.++..++...
T Consensus 100 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~ 165 (624)
T PRK12582 100 LGLDPGRPVMILSGNSIE--HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQS 165 (624)
T ss_pred cCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecC
Confidence 578999999999985543 33347889999999988754 33 37888888888888777653
No 235
>PRK13391 acyl-CoA synthetase; Provisional
Probab=46.40 E-value=1.4e+02 Score=25.36 Aligned_cols=64 Identities=2% Similarity=-0.111 Sum_probs=50.5
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
.++.+++++...++-+... ...+++.+..|+.++..+ ..+...+...++..++..+...+....
T Consensus 44 ~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 108 (511)
T PRK13391 44 LGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLD 108 (511)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHH
Confidence 4788899998888876653 333678899999998875 468889999999999998888775543
No 236
>PRK09192 acyl-CoA synthetase; Validated
Probab=46.20 E-value=1.5e+02 Score=25.88 Aligned_cols=65 Identities=5% Similarity=-0.123 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CC-------HHHHHHHHHhcCceEEEechHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-------LEMFLRAIEKHRVTHIWVVPPLILA 74 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-------~~~~~~~i~~~~~t~l~~~p~~~~~ 74 (228)
.++.++|++...++-+-. +...+++++..|+..+.++. +. .+++...++..++..+.........
T Consensus 69 ~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~ 141 (579)
T PRK09192 69 LGLKPGDRVALIAETDGD--FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPW 141 (579)
T ss_pred hCCCCCCEEEEEcCCchh--HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHH
Confidence 578999999999987554 33347788999999988842 11 5788999999999988887665433
No 237
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=43.86 E-value=2.2e+02 Score=24.74 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=32.9
Q ss_pred CCCcEEEEecchhhH-HhHHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHh
Q 027096 11 ELDYVFLCVLPLFHV-FGLAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEK 59 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~-~g~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~ 59 (228)
.+--+++..+|+.+- ......+..+|..|.++++-+. . ....+.+++.+
T Consensus 166 ~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e 219 (518)
T cd07125 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHE 219 (518)
T ss_pred ecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH
Confidence 345678888888663 2334457899999999999764 2 23456666665
No 238
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=43.15 E-value=1e+02 Score=20.66 Aligned_cols=84 Identities=17% Similarity=0.006 Sum_probs=49.1
Q ss_pred hhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechH---H---HHHHHhcCCCCCCCCCCceEEEEc
Q 027096 23 FHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP---L---ILALAKHGLVKKFDLSSLKLVGSG 95 (228)
Q Consensus 23 ~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~---~---~~~l~~~~~~~~~~~~~lr~~~~~ 95 (228)
.|..|........-..|-.++.... ..++.+.+.+.+.+++++...-+ . ++.+++..+.. ....++ ++.|
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~--~~~~i~-i~~G 87 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL--GAGDIL-VVGG 87 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc--CCCCCE-EEEE
Confidence 5777777644454556666666654 57889999999999998776532 1 22222221111 122343 5556
Q ss_pred ccCCCHHHHHHHHHh
Q 027096 96 AAPLGKELMEECAKN 110 (228)
Q Consensus 96 G~~l~~~~~~~~~~~ 110 (228)
|. .+++..+++.+.
T Consensus 88 G~-~~~~~~~~~~~~ 101 (122)
T cd02071 88 GI-IPPEDYELLKEM 101 (122)
T ss_pred CC-CCHHHHHHHHHC
Confidence 64 455666666664
No 239
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=43.06 E-value=1.2e+02 Score=23.66 Aligned_cols=75 Identities=11% Similarity=0.180 Sum_probs=40.3
Q ss_pred HHhhcCcEEEEcCC-------------CCH--HHHHHHHHhcCceEEEechHHHHHHHhcCCC---CCCCCCCceEEEEc
Q 027096 34 GQLQKGSCIILMAK-------------FDL--EMFLRAIEKHRVTHIWVVPPLILALAKHGLV---KKFDLSSLKLVGSG 95 (228)
Q Consensus 34 ~~l~~G~~~~~~~~-------------~~~--~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~---~~~~~~~lr~~~~~ 95 (228)
-|+.+|.++.+... .++ .++|+.+.+.+++ |..+..+++..+. .+....+++.+.
T Consensus 83 iAVA~G~~vyiYkNlkP~yKftlP~~~~~~~E~eiW~~~~~~~i~-----~~~l~~~L~~lr~~~~~~LS~rSl~~L~-- 155 (257)
T PF14779_consen 83 IAVAAGPSVYIYKNLKPFYKFTLPPLEINPLEQEIWQQLREGKID-----PETLKEMLESLRDIAGVKLSPRSLRFLQ-- 155 (257)
T ss_pred EEEEeCCEEEEEecccceeeecCCCCCCCHHHHHHHHhcccCCCC-----HHHHHHHHHHHhhccCCccCHHHHHHHC--
Confidence 45677888877642 133 4567777766655 3334434333222 222223455442
Q ss_pred ccCCCHHHHHHHHHhCCCCeEEe
Q 027096 96 AAPLGKELMEECAKNVPSATVIQ 118 (228)
Q Consensus 96 G~~l~~~~~~~~~~~~~~~~l~~ 118 (228)
++++.++.+.+.+.+.++.+
T Consensus 156 ---l~~ee~~~fi~~~k~~pl~~ 175 (257)
T PF14779_consen 156 ---LDPEEREAFIERYKDSPLKR 175 (257)
T ss_pred ---CCHHHHHHHHHHHhcCCccc
Confidence 45677777777765555544
No 240
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.61 E-value=1.5e+02 Score=25.67 Aligned_cols=60 Identities=7% Similarity=0.030 Sum_probs=47.8
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechH
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
++.++|++...+|-+.- +...+++++..|+..+..+. ....++...++..++..++....
T Consensus 59 ~v~~gdrVail~~N~~e--~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 59 GVKPGDRVAILLPNSPE--FLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred CCCCCCEEEEECCCCHH--HHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEccc
Confidence 47889999999987654 33447888999999999865 57888888898888888877755
No 241
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=42.37 E-value=80 Score=19.35 Aligned_cols=16 Identities=19% Similarity=0.144 Sum_probs=12.8
Q ss_pred CccccCCCceEEEEeC
Q 027096 143 SAGALAPGVEALIVSV 158 (228)
Q Consensus 143 ~~g~p~~~~~~~i~d~ 158 (228)
+-++|+.++++++.+.
T Consensus 6 C~~~P~~~~~V~L~e~ 21 (80)
T PF01060_consen 6 CGGKPAKNVKVKLWED 21 (80)
T ss_pred eCCccCCCCEEEEEEC
Confidence 3467899999999983
No 242
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=42.01 E-value=1.9e+02 Score=24.77 Aligned_cols=48 Identities=15% Similarity=0.032 Sum_probs=33.1
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
|--++....|+.+-..+ ...+..+|..|.++++-+.. +...+.+++.+
T Consensus 145 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~ 197 (481)
T cd07141 145 PVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKE 197 (481)
T ss_pred ceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH
Confidence 34578889998776554 33467899999999998642 34455666655
No 243
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=41.80 E-value=1.4e+02 Score=29.41 Aligned_cols=80 Identities=11% Similarity=0.085 Sum_probs=50.4
Q ss_pred CCCCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHh--cCceEEEechH----HHHHHHhc
Q 027096 10 GELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF-D---LEMFLRAIEK--HRVTHIWVVPP----LILALAKH 78 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~--~~~t~l~~~p~----~~~~l~~~ 78 (228)
..+-.++.+.+|+.+-..+. ..+..+|..|.++++-|.. + ...+.+++.+ .....+.++|. .-..|..+
T Consensus 766 ~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~ 845 (1318)
T PRK11809 766 HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVAD 845 (1318)
T ss_pred eecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcC
Confidence 34667999999998754443 3467899999999998742 2 3445666666 34556666653 33444444
Q ss_pred CCCCCCCCCCceEEEEccc
Q 027096 79 GLVKKFDLSSLKLVGSGAA 97 (228)
Q Consensus 79 ~~~~~~~~~~lr~~~~~G~ 97 (228)
+.++.|.+.|.
T Consensus 846 --------p~V~~V~FTGS 856 (1318)
T PRK11809 846 --------ARVRGVMFTGS 856 (1318)
T ss_pred --------CCcCEEEEeCC
Confidence 33555555553
No 244
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=41.68 E-value=1.3e+02 Score=25.91 Aligned_cols=60 Identities=12% Similarity=0.001 Sum_probs=47.1
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...++-+... ...+++.+..|+.++..+ ....+.+...++..+++.+++.+
T Consensus 73 ~g~~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 133 (538)
T TIGR03208 73 LGVGRGDVVSFQLPNRWEF--TALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPS 133 (538)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEcc
Confidence 5788999999888865543 333678899999988775 46788899999999999888755
No 245
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=41.65 E-value=22 Score=19.50 Aligned_cols=22 Identities=27% Similarity=0.244 Sum_probs=19.0
Q ss_pred eEEEEcccCCCHHHHHHHHHhC
Q 027096 90 KLVGSGAAPLGKELMEECAKNV 111 (228)
Q Consensus 90 r~~~~~G~~l~~~~~~~~~~~~ 111 (228)
+.+-++|.|++.+..+.++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 4577899999999999998877
No 246
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=41.44 E-value=1.6e+02 Score=25.07 Aligned_cols=57 Identities=11% Similarity=0.024 Sum_probs=36.8
Q ss_pred CcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
--+++...|+.+-..+. ..+..+|..|.++++-+.. ....+.+++.+. ....+..++
T Consensus 136 ~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~ 199 (473)
T cd07097 136 LGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVM 199 (473)
T ss_pred eeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEec
Confidence 35788888987765443 2367899999999997642 344566666653 334444443
No 247
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=41.32 E-value=1.2e+02 Score=25.52 Aligned_cols=61 Identities=11% Similarity=-0.025 Sum_probs=46.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++.++|++...++-+...- ..+++++..|+..++.+. ...+.+...++..++..+.....
T Consensus 45 ~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 106 (502)
T TIGR01734 45 RILPKKSPIIVYGHMEPHML--VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAE 106 (502)
T ss_pred hCCCCCCeEEEEeCCCHHHH--HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEeccc
Confidence 46788888888888765533 337789999999888764 56778889999999888887653
No 248
>PRK13390 acyl-CoA synthetase; Provisional
Probab=41.27 E-value=1.3e+02 Score=25.47 Aligned_cols=60 Identities=8% Similarity=-0.057 Sum_probs=47.1
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...++-+.. +...+++.+..|+..+..+ ...+..+..+++..++..+....
T Consensus 44 ~gv~~gd~V~i~~~n~~~--~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 44 AGLRTGDVVALLSDNSPE--ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred cCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcc
Confidence 578899999998887665 3344788899999988875 46888888889888888776644
No 249
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=40.95 E-value=2.6e+02 Score=27.38 Aligned_cols=79 Identities=11% Similarity=0.075 Sum_probs=49.0
Q ss_pred CCCcEEEEecchhhHH-hHHHHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHhc--CceEEEechH----HHHHHHhcC
Q 027096 11 ELDYVFLCVLPLFHVF-GLAVITCGQLQKGSCIILMAKF-D---LEMFLRAIEKH--RVTHIWVVPP----LILALAKHG 79 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~-g~~~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~~--~~t~l~~~p~----~~~~l~~~~ 79 (228)
.+--++.+.+|+.+-. -+...+..+|..|.++++-|.. + ...+.+++.+. +...+.++|. .-..|..+
T Consensus 675 ~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~- 753 (1208)
T PRK11905 675 KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVAD- 753 (1208)
T ss_pred cCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcC-
Confidence 3567899999997743 3333467999999999998642 2 34456666663 4455555543 34445444
Q ss_pred CCCCCCCCCceEEEEccc
Q 027096 80 LVKKFDLSSLKLVGSGAA 97 (228)
Q Consensus 80 ~~~~~~~~~lr~~~~~G~ 97 (228)
+.+..+.+.|.
T Consensus 754 -------p~v~~V~FTGS 764 (1208)
T PRK11905 754 -------PRIAGVMFTGS 764 (1208)
T ss_pred -------CCcCEEEEeCC
Confidence 23555555554
No 250
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=40.26 E-value=2.3e+02 Score=24.19 Aligned_cols=66 Identities=14% Similarity=0.019 Sum_probs=40.3
Q ss_pred CcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech---HHHHHHHhc
Q 027096 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP---PLILALAKH 78 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p---~~~~~l~~~ 78 (228)
--+++..+|+.+-..+ ...+..+|..|.++++-+.. ....+.+++++. ....+..++ .....|+++
T Consensus 137 ~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~ 212 (478)
T cd07085 137 LGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDH 212 (478)
T ss_pred ceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcC
Confidence 3588888898765433 33367899999999998642 345566666653 333444332 334445444
No 251
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=39.53 E-value=1.9e+02 Score=25.00 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=37.9
Q ss_pred CCCcEEEEecchhhHHh-HHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHh--cCceEEEech
Q 027096 11 ELDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEK--HRVTHIWVVP 69 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~--~~~t~l~~~p 69 (228)
.+--+++...|+.+-.. ....+..+|..|.++++-+. . ....+.+++.+ .....+..++
T Consensus 166 ~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~ 231 (511)
T TIGR01237 166 QPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVP 231 (511)
T ss_pred ecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEcc
Confidence 34568888999877433 33457899999999999864 2 34445666655 3444444443
No 252
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=39.37 E-value=1.3e+02 Score=26.55 Aligned_cols=60 Identities=5% Similarity=-0.006 Sum_probs=46.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CC-----HHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-----LEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...++-+.. +...+++++..|++++..+. .. ..++..++++.++..+++..
T Consensus 89 ~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 89 RGLSAERPLMILSGNSIE--HALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred cCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 578899999999887664 33347889999999998864 33 67888889988888887753
No 253
>PLN02278 succinic semialdehyde dehydrogenase
Probab=39.05 E-value=2.1e+02 Score=24.73 Aligned_cols=58 Identities=10% Similarity=-0.043 Sum_probs=36.9
Q ss_pred CCCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHh--cCceEEEec
Q 027096 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF-D---LEMFLRAIEK--HRVTHIWVV 68 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~--~~~t~l~~~ 68 (228)
.|--+++...|+.+-..+. ..+..+|..|.++++-+.. . ...+.+++.+ .....+..+
T Consensus 159 ~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v 223 (498)
T PLN02278 159 QPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVV 223 (498)
T ss_pred ecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEE
Confidence 3556889999997764443 2477999999999998642 2 3345555555 333444443
No 254
>PRK08308 acyl-CoA synthetase; Validated
Probab=38.94 E-value=1.8e+02 Score=23.87 Aligned_cols=60 Identities=10% Similarity=0.016 Sum_probs=45.0
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.+++++...++-... +...+++.+..|+.++..+. ...+.+...+++.++..+....
T Consensus 27 ~~~~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (414)
T PRK08308 27 FQEAAGNRFAVCLKDPFD--IITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGE 87 (414)
T ss_pred cCCCCCCEEEEECCCChH--HHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecC
Confidence 467889999888876554 33446788999999998864 5667788888888888777644
No 255
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=38.74 E-value=1.6e+02 Score=25.37 Aligned_cols=60 Identities=8% Similarity=-0.009 Sum_probs=46.9
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...++-.... ...+++.+..|+.++..+ ......+...++..++..+++..
T Consensus 66 ~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~ 126 (541)
T TIGR03205 66 AGYGKDASVALYLGNTPDH--PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSD 126 (541)
T ss_pred cCCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeC
Confidence 4788999999888865542 333678888999998775 46788899999999999887653
No 256
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=38.58 E-value=1.6e+02 Score=25.23 Aligned_cols=37 Identities=19% Similarity=0.072 Sum_probs=26.3
Q ss_pred CCCcEEEEecchhhHH-hHHHHHHHHhhcCcEEEEcCC
Q 027096 11 ELDYVFLCVLPLFHVF-GLAVITCGQLQKGSCIILMAK 47 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~-g~~~~~~~~l~~G~~~~~~~~ 47 (228)
.|--++...+|+.+-. -....+..+|..|.++++-|.
T Consensus 132 ~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPs 169 (472)
T COG1012 132 EPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPS 169 (472)
T ss_pred ecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECc
Confidence 3445788888886554 223346799999999999763
No 257
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=37.87 E-value=36 Score=19.42 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=9.5
Q ss_pred CceEEEcCCCcEEEecc
Q 027096 196 GDLGYFDGDGQLYVVDR 212 (228)
Q Consensus 196 GD~~~~~~~g~~~~~GR 212 (228)
|.+.+.++||.+.+.|+
T Consensus 33 ~~i~Y~~~dg~yli~G~ 49 (57)
T PF10411_consen 33 GGILYVDEDGRYLIQGQ 49 (57)
T ss_dssp TEEEEEETTSSEEEES-
T ss_pred CeEEEEcCCCCEEEEeE
Confidence 34555666666666654
No 258
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=37.75 E-value=1.9e+02 Score=24.20 Aligned_cols=60 Identities=7% Similarity=-0.082 Sum_probs=46.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++....+-.... ...+++.+..|+..+..+ ....+.+...+++.++..+....
T Consensus 48 ~g~~~~~~v~l~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~ 108 (458)
T PRK09029 48 QGVVEGSGVALRGKNSPET--LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLE 108 (458)
T ss_pred cCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 4788999999888766643 333678899999999885 46788888889999988877654
No 259
>PRK13509 transcriptional repressor UlaR; Provisional
Probab=37.66 E-value=1.2e+02 Score=23.49 Aligned_cols=84 Identities=15% Similarity=0.048 Sum_probs=50.2
Q ss_pred HHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccCCC------HHHHHHH
Q 027096 34 GQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLG------KELMEEC 107 (228)
Q Consensus 34 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~------~~~~~~~ 107 (228)
.-+-.|.++++-.+.+...+.+.|...++|++.-.......+.+. ++++.++.||+--+ ....+.+
T Consensus 89 ~~I~~g~~Ifld~GsT~~~la~~L~~~~ltVvTnsl~ia~~l~~~--------~~~~v~l~GG~~~~~~~~~~G~~~~~l 160 (251)
T PRK13509 89 QLCNPGESVVINCGSTAFLLGRELCGKPVQIITNYLPLANYLIDQ--------EHDSVIIMGGQYNKSQSITLSPQGSEN 160 (251)
T ss_pred HhCCCCCEEEECCcHHHHHHHHHhCCCCeEEEeCCHHHHHHHHhC--------CCCEEEEECCeEcCCcceeECHHHHHH
Confidence 334556677776677777888888766677766666666666543 23567777775311 1223444
Q ss_pred HHhCCCCeEEeccccccc
Q 027096 108 AKNVPSATVIQGYGLTET 125 (228)
Q Consensus 108 ~~~~~~~~l~~~yG~tE~ 125 (228)
++...+..++..-|-++.
T Consensus 161 ~~~~~d~aFig~~gi~~~ 178 (251)
T PRK13509 161 SLYAGHWMFTSGKGLTAD 178 (251)
T ss_pred HhCcCCEEEECCCcCCCC
Confidence 443235556666666543
No 260
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=37.01 E-value=2.6e+02 Score=23.63 Aligned_cols=48 Identities=13% Similarity=0.026 Sum_probs=32.1
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
|-.+++..+|+.+-... ...+..+|..|.++++-+.. ....+.+++++
T Consensus 118 P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~ 170 (450)
T cd07092 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE 170 (450)
T ss_pred ccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh
Confidence 44588888998665443 33467899999999998642 33445666654
No 261
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=36.96 E-value=2.1e+02 Score=24.33 Aligned_cols=49 Identities=16% Similarity=0.097 Sum_probs=33.0
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++..+|+.+-... ...+..+|..|.++++-+.. ....+.+++.+.
T Consensus 123 P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~a 176 (459)
T cd07089 123 PVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAET 176 (459)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 33488888898665332 33467999999999998642 344566666663
No 262
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=36.73 E-value=1.5e+02 Score=24.97 Aligned_cols=60 Identities=12% Similarity=-0.019 Sum_probs=45.8
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.+++++....+-... +...++..+..|+..+..+. ...+.+...++..++..++...
T Consensus 47 ~g~~~~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (503)
T PRK04813 47 LKLPDKSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATE 107 (503)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecc
Confidence 467788999888885554 33447888999999888764 6777888888888888887654
No 263
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=36.72 E-value=2.1e+02 Score=24.29 Aligned_cols=49 Identities=12% Similarity=-0.005 Sum_probs=33.9
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++...|+.+-..+.. .+..+|..|.++++-+.. ....+.+++++.
T Consensus 120 P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 173 (456)
T cd07110 120 PVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEA 173 (456)
T ss_pred cceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHc
Confidence 4458889999876654432 467899999999997642 344566666654
No 264
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=36.67 E-value=15 Score=21.72 Aligned_cols=7 Identities=57% Similarity=1.232 Sum_probs=6.0
Q ss_pred CeEEcCc
Q 027096 191 GWVHTGD 197 (228)
Q Consensus 191 ~~~~TGD 197 (228)
-||.|||
T Consensus 73 hwydtgd 79 (80)
T PF05452_consen 73 HWYDTGD 79 (80)
T ss_pred ccccCCC
Confidence 4999998
No 265
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=36.66 E-value=1.6e+02 Score=25.27 Aligned_cols=60 Identities=8% Similarity=-0.021 Sum_probs=46.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++.++|++...++-... +...+++++..|+..+... ....+.+...+++.++..+...+
T Consensus 68 ~g~~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~ 128 (527)
T TIGR02275 68 LGIGQGDTAVVQLPNIAE--FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDR 128 (527)
T ss_pred cCCCCCCEEEEECCCcHH--HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcC
Confidence 578899999988876554 3344778899999887664 45788899999998888877654
No 266
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=34.70 E-value=2.5e+02 Score=26.83 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=52.0
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHHHHHH
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 76 (228)
+.++|++...+|-+...-. .+++.+..|+..+..+ ....+++...+++.+++.+...+.....+.
T Consensus 662 ~~~g~~V~i~~~n~~~~~~--~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 662 LKDEENVGILLPPSVAGAL--ANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CCCCCeEEEECCCchHHHH--HHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 5789999999887765333 3678899999988875 467899999999999999998887666553
No 267
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=34.66 E-value=84 Score=22.59 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=36.7
Q ss_pred cCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccC-CCHHHHHHHHHhCCCCeE
Q 027096 38 KGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKNVPSATV 116 (228)
Q Consensus 38 ~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~-l~~~~~~~~~~~~~~~~l 116 (228)
+.+.++++++.....+.+.+... ...-..-+.++..+++..... ..|..++|+.+ .-....+++++.+|+..+
T Consensus 2 ~~a~~~~~DG~~l~~~~~~~~~~-~~~r~~g~dl~~~ll~~~~~~-----~~~v~llG~~~~~~~~~~~~l~~~yp~l~i 75 (171)
T cd06533 2 NSADLVLPDGIGVVWAARLLGGP-LPERVTGSDLMPALLELAAQK-----GLRVFLLGAKPEVLEKAAERLRARYPGLKI 75 (171)
T ss_pred CCCCEEecCcHHHHHHHHHcCCC-CCcccCcHHHHHHHHHHHHHc-----CCeEEEECCCHHHHHHHHHHHHHHCCCcEE
Confidence 34556666554444444444332 111223355566665543222 35666666643 223334457777787775
Q ss_pred E
Q 027096 117 I 117 (228)
Q Consensus 117 ~ 117 (228)
.
T Consensus 76 ~ 76 (171)
T cd06533 76 V 76 (171)
T ss_pred E
Confidence 5
No 268
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=34.44 E-value=3e+02 Score=23.58 Aligned_cols=67 Identities=12% Similarity=-0.021 Sum_probs=40.4
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC--ceEEEec---hHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR--VTHIWVV---PPLILALAKH 78 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~--~t~l~~~---p~~~~~l~~~ 78 (228)
|--++...+|+.+-..+. ..+..+|..|.++++-+. . +...+.+++.+.. ...+.++ ......|+++
T Consensus 136 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~ 212 (477)
T TIGR01722 136 PLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEH 212 (477)
T ss_pred ccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcC
Confidence 345888899887754333 235588999999999864 2 3445666666642 2333333 3344555544
No 269
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=34.38 E-value=2.3e+02 Score=24.04 Aligned_cols=48 Identities=13% Similarity=0.082 Sum_probs=33.3
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
|--+++..+|+.+-..+ ...+..+|..|.++++-+.. +...+.+++++
T Consensus 123 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ 175 (456)
T cd07145 123 PIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEE 175 (456)
T ss_pred cceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence 44578888888765443 23467899999999997642 34456777766
No 270
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=33.93 E-value=2.2e+02 Score=24.31 Aligned_cols=46 Identities=13% Similarity=0.070 Sum_probs=31.6
Q ss_pred cEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
-+++...|+.+-..+. ..+..+|..|.++++-+.. ....+.+++.+
T Consensus 143 GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~ 193 (476)
T cd07091 143 GVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKE 193 (476)
T ss_pred eEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 4788888887654443 2366899999999998642 33456666666
No 271
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=33.88 E-value=1.7e+02 Score=20.70 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=58.6
Q ss_pred HHhhcCcEEEEcCCCCHHHHHHHHHhc-CceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccCC-------CHHHHH
Q 027096 34 GQLQKGSCIILMAKFDLEMFLRAIEKH-RVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPL-------GKELME 105 (228)
Q Consensus 34 ~~l~~G~~~~~~~~~~~~~~~~~i~~~-~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l-------~~~~~~ 105 (228)
.-+-.|.++++-.+.+...+.+.|.+. ++|++.-....+..+.+. +..+.++.||+.- .+...+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~ 86 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALE 86 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHH
Confidence 335567777777778888999999887 788777777777777554 2577888888432 345566
Q ss_pred HHHHhCCCCeEEecccccccCC
Q 027096 106 ECAKNVPSATVIQGYGLTETSG 127 (228)
Q Consensus 106 ~~~~~~~~~~l~~~yG~tE~g~ 127 (228)
.+++...+.-++..-|-++-.+
T Consensus 87 ~l~~~~~d~afi~~~gi~~~~G 108 (161)
T PF00455_consen 87 ALRQFRFDKAFIGADGISEEGG 108 (161)
T ss_pred HHHhhccceEEecccEecCCCc
Confidence 6666544666777777666433
No 272
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=33.69 E-value=2.3e+02 Score=24.06 Aligned_cols=50 Identities=12% Similarity=0.107 Sum_probs=33.8
Q ss_pred CCCcEEEEecchhhHH-hHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 11 ELDYVFLCVLPLFHVF-GLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~-g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
.|--++....|+.+-. .....+..+|..|.++++-+.. ....+.+++++.
T Consensus 129 ~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 183 (466)
T cd07138 129 EPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEA 183 (466)
T ss_pred eecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHc
Confidence 3445788899986553 2333478999999999997642 344566666654
No 273
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=33.64 E-value=2.4e+02 Score=23.84 Aligned_cols=49 Identities=20% Similarity=0.070 Sum_probs=32.6
Q ss_pred CCcEEEEecchhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
+--+++..+|+.+-.. ....+..+|..|.++++-+.. ....+.+.+++.
T Consensus 116 P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 169 (452)
T cd07102 116 PLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEA 169 (452)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 3458888888766532 233478999999999998642 334566666654
No 274
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=33.54 E-value=2e+02 Score=24.22 Aligned_cols=57 Identities=9% Similarity=0.088 Sum_probs=43.1
Q ss_pred CCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
..++++...++-+.. +...+++++..|+.++..+ .....++...+++.+++.+....
T Consensus 43 ~~~~~V~i~~~n~~e--~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (452)
T PRK07445 43 RTPPKILLAESDPLQ--FLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLD 100 (452)
T ss_pred CCCCeEEEecCCCHH--HHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecC
Confidence 468888777775432 3334778899999999985 46888899999999998887643
No 275
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=33.51 E-value=2.9e+02 Score=23.11 Aligned_cols=50 Identities=12% Similarity=0.010 Sum_probs=34.5
Q ss_pred CCcEEEEecchhhH-HhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC
Q 027096 12 LDYVFLCVLPLFHV-FGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR 61 (228)
Q Consensus 12 ~~d~~~~~~p~~~~-~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~ 61 (228)
+-.+++...|..+- ......+..+|..|.++++.+.. ....+.+.+++..
T Consensus 96 P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag 150 (432)
T cd07078 96 PLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAG 150 (432)
T ss_pred ecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcC
Confidence 44588888887665 33344578999999999987642 3456777777643
No 276
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=33.49 E-value=1.6e+02 Score=20.31 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=51.9
Q ss_pred hhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechH------HHHHHHhcCCCCCCCCCCceEEEEc
Q 027096 23 FHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKFDLSSLKLVGSG 95 (228)
Q Consensus 23 ~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~~~~lr~~~~~ 95 (228)
.|..|........=.+|-.++.... .+++++.+...+++++.+.++.- .+..+.+..+.. .+... .+++|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~--gl~~~-~vivG 89 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEA--GLEGI-LLYVG 89 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHC--CCCCC-EEEec
Confidence 6777776533333345666666553 58999999999999987654431 133333322222 23333 47778
Q ss_pred ccC-CCHHHHH----HHHHhCCCCeEEeccccc
Q 027096 96 AAP-LGKELME----ECAKNVPSATVIQGYGLT 123 (228)
Q Consensus 96 G~~-l~~~~~~----~~~~~~~~~~l~~~yG~t 123 (228)
|.+ ++++-.+ ++++. + +-..||+.
T Consensus 90 G~~vi~~~d~~~~~~~l~~~--G--v~~vF~pg 118 (134)
T TIGR01501 90 GNLVVGKQDFPDVEKRFKEM--G--FDRVFAPG 118 (134)
T ss_pred CCcCcChhhhHHHHHHHHHc--C--CCEEECcC
Confidence 865 4544433 45543 2 44455543
No 277
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=33.33 E-value=2.6e+02 Score=23.94 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=33.7
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--++...+|+.+-..+ ...+..+|..|.++++-+.. ....+.+++.+.
T Consensus 144 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 197 (481)
T cd07143 144 PIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA 197 (481)
T ss_pred cceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhc
Confidence 34578888888776554 33467899999999998642 334456666653
No 278
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.09 E-value=3.4e+02 Score=23.93 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=46.1
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCC---HHHHHHHHHhcCceEEEechHHHH
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFD---LEMFLRAIEKHRVTHIWVVPPLIL 73 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~---~~~~~~~i~~~~~t~l~~~p~~~~ 73 (228)
+.++|++...++-+.. +...+++++..|+.++.. +... .+.+..++++.++..+........
T Consensus 76 ~~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 141 (631)
T PRK07769 76 TKPGDRVAILAPQNLD--YLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAE 141 (631)
T ss_pred cCCCCEEEEEcCCChH--HHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHH
Confidence 5789999998887654 334477889999998876 3222 567888899999998888776543
No 279
>PRK09490 metH B12-dependent methionine synthase; Provisional
Probab=32.91 E-value=4.7e+02 Score=25.82 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=52.8
Q ss_pred cEEEEecch-hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech---HHHHHHH---hcCCCCCCC
Q 027096 14 YVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP---PLILALA---KHGLVKKFD 85 (228)
Q Consensus 14 d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p---~~~~~l~---~~~~~~~~~ 85 (228)
-+++.+.+- -|..|....-..--.+|-.++... ...++.+++.+.+++++++.++- +.+..+. +..+...
T Consensus 753 kvvlaTv~GDvHDIGkniV~~~L~~~GfeVIdLG~~vp~e~iv~aa~e~~~diVgLS~L~t~s~~~m~~~i~~L~~~g-- 830 (1229)
T PRK09490 753 KILMATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMVPAEKILETAKEENADIIGLSGLITPSLDEMVHVAKEMERQG-- 830 (1229)
T ss_pred eEEEEeCCCCcchHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcchhhHHHHHHHHHHHHhcC--
Confidence 344444442 677788765445456677777765 46899999999999999876542 2222222 2211121
Q ss_pred CCCceEEEEcccCCCHHH
Q 027096 86 LSSLKLVGSGAAPLGKEL 103 (228)
Q Consensus 86 ~~~lr~~~~~G~~l~~~~ 103 (228)
..+ .+++||.++++..
T Consensus 831 -~~v-~v~vGGa~~s~~~ 846 (1229)
T PRK09490 831 -FTI-PLLIGGATTSKAH 846 (1229)
T ss_pred -CCC-eEEEEeeccchhh
Confidence 133 3778999988655
No 280
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=32.87 E-value=3e+02 Score=23.15 Aligned_cols=58 Identities=21% Similarity=0.083 Sum_probs=37.5
Q ss_pred CCCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEec
Q 027096 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~ 68 (228)
.|--+++..+|+.+-... ...+..+|..|.++++-+.. ....+.+++.+. +...+..+
T Consensus 97 ~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v 161 (432)
T cd07105 97 EPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVV 161 (432)
T ss_pred ecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEE
Confidence 455688888888775442 23477999999999998642 344566666653 33444443
No 281
>PRK07787 acyl-CoA synthetase; Validated
Probab=31.80 E-value=2.4e+02 Score=23.73 Aligned_cols=58 Identities=5% Similarity=-0.088 Sum_probs=44.3
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
+.++|++...++-.- .+...+++.+..|+..+..+ ....+.+...+++.+++.+...+
T Consensus 42 L~~~~~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~ 100 (471)
T PRK07787 42 VAGARRVAVLATPTL--ATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPA 100 (471)
T ss_pred hccCCEEEEECCCCH--HHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecC
Confidence 346788877776553 34445788999999998875 46788999999999999888764
No 282
>PRK07868 acyl-CoA synthetase; Validated
Probab=31.45 E-value=3e+02 Score=26.26 Aligned_cols=64 Identities=16% Similarity=0.025 Sum_probs=48.2
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|+|...++-.-. +...+++++..|+.++..+.. ..+...++..++..++..+..+..+
T Consensus 492 ~Gv~~Gd~VaI~~~n~~e--~v~a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li~~~~~~~~~ 555 (994)
T PRK07868 492 VGVRQGDRVGVLMETRPS--ALVAIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEIITDPTNLEAA 555 (994)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEEEChHHHHHH
Confidence 588999999988886554 333477899999999998752 4667778888888888776655443
No 283
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=31.10 E-value=3.5e+02 Score=23.44 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=37.6
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~ 68 (228)
+--+++...|+.+-..+ ...+..+|..|.++++-+.. ....+.+++.+. ....+..+
T Consensus 171 P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv 234 (514)
T PRK03137 171 PLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFV 234 (514)
T ss_pred cCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEe
Confidence 44589999998775443 33478999999999998642 344566666654 34444443
No 284
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=31.04 E-value=3.3e+02 Score=23.06 Aligned_cols=49 Identities=12% Similarity=0.051 Sum_probs=34.1
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
+--++...+|+.+-.... ..+..+|..|.++++-+.. ....+.+++.+.
T Consensus 117 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 170 (448)
T TIGR01780 117 PVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA 170 (448)
T ss_pred eeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHc
Confidence 445888899987665443 3477999999999998642 344466666654
No 285
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=30.57 E-value=40 Score=21.71 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=16.7
Q ss_pred CccccCCCceEEEEeCCCCCCCC
Q 027096 143 SAGALAPGVEALIVSVDTQKPLP 165 (228)
Q Consensus 143 ~~g~p~~~~~~~i~d~~~~~~~~ 165 (228)
.-|+|++++++++.+...++++.
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~ 45 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLA 45 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEee
Confidence 35789999999999844455443
No 286
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=30.51 E-value=2.7e+02 Score=23.82 Aligned_cols=49 Identities=12% Similarity=-0.034 Sum_probs=33.4
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++..+|+.+-..+. ..+..+|..|.++++-+.. ....+.+++.+.
T Consensus 141 P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a 194 (476)
T cd07142 141 PIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEA 194 (476)
T ss_pred ceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHc
Confidence 445888889987765543 3366899999999998642 234456666654
No 287
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase. S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase.
Probab=30.46 E-value=5.3e+02 Score=25.32 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=56.4
Q ss_pred CcEEEEecch-hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech---HHHHHHH---hcCCCCCC
Q 027096 13 DYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP---PLILALA---KHGLVKKF 84 (228)
Q Consensus 13 ~d~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p---~~~~~l~---~~~~~~~~ 84 (228)
+.+++.+.+- -|..|....-..--.+|-.++-.. ...++.+++.+++++++++.++- +.+..+. +..+...
T Consensus 733 gkVvlaTV~GDvHDIGKnIV~~~L~~~GfeVIdLG~dVp~e~iv~aa~e~~~diVgLS~Lmt~t~~~m~~vi~~L~~~g- 811 (1178)
T TIGR02082 733 GKIVLATVKGDVHDIGKNIVGVVLSCNGYEVVDLGVMVPIEKILEAAKDHNADVIGLSGLITPSLDEMKEVAEEMNRRG- 811 (1178)
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcccccHHHHHHHHHHHHhcC-
Confidence 4455555543 677788765555556677777665 46799999999999999876542 2222222 2221121
Q ss_pred CCCCceEEEEcccCCCHHHHHH
Q 027096 85 DLSSLKLVGSGAAPLGKELMEE 106 (228)
Q Consensus 85 ~~~~lr~~~~~G~~l~~~~~~~ 106 (228)
+ .+ .+++||.+++++..+.
T Consensus 812 -~-~v-~v~vGGa~~s~~~~~~ 830 (1178)
T TIGR02082 812 -I-TI-PLLIGGAATSKTHTAV 830 (1178)
T ss_pred -C-Cc-eEEEeccccchhHHHh
Confidence 1 23 4788999998887764
No 288
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=30.45 E-value=2.9e+02 Score=23.54 Aligned_cols=48 Identities=15% Similarity=0.024 Sum_probs=32.4
Q ss_pred CcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 027096 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (228)
--+++..+|+.+-..+. ..+..+|..|.++++-+. . ....+.+++.+.
T Consensus 125 ~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 177 (462)
T cd07112 125 LGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEA 177 (462)
T ss_pred eeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhc
Confidence 45788888987655443 235689999999999764 2 334566666653
No 289
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.29 E-value=22 Score=29.43 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=31.2
Q ss_pred CCceEEEEcccCCCHHHHHHHHHhCCCCeEEecccc-cccCCcee
Q 027096 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGL-TETSGIAT 130 (228)
Q Consensus 87 ~~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~-tE~g~~~~ 130 (228)
...+..+++++...+...++++..--.+ =++.||+ ||+-++-.
T Consensus 128 kG~K~~LvcaDTFRagAfDQLkqnA~k~-~iP~ygsyte~dpv~i 171 (483)
T KOG0780|consen 128 KGYKVALVCADTFRAGAFDQLKQNATKA-RVPFYGSYTEADPVKI 171 (483)
T ss_pred cCCceeEEeecccccchHHHHHHHhHhh-CCeeEecccccchHHH
Confidence 4678899999999999999998853122 2477887 77666543
No 290
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=29.86 E-value=4.1e+02 Score=23.79 Aligned_cols=68 Identities=12% Similarity=0.005 Sum_probs=41.7
Q ss_pred CCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEech---HHHHHHHhc
Q 027096 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP---PLILALAKH 78 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~l~~~p---~~~~~l~~~ 78 (228)
.|-.+++..+|+.+-..+.. .+..+|..|.++++-+. . ....+.+++.+. ....+.+++ .....|+.+
T Consensus 248 eP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~ 325 (604)
T PLN02419 248 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDD 325 (604)
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhC
Confidence 45678999999876655443 25679999999999764 2 234456666653 334444443 334444443
No 291
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=29.37 E-value=2.2e+02 Score=27.79 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=50.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEechHHHHHH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l 75 (228)
.++.++|++...++-+.. +...+++.+..|+.++..+. ...+.+...++..++..+.........+
T Consensus 503 ~g~~~g~~V~l~~~~~~~--~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~ 569 (1296)
T PRK10252 503 RGVKPGDSVAVALPRSVF--LTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRF 569 (1296)
T ss_pred cCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhc
Confidence 478899999988887665 33447899999999999865 5567788888999999888776554433
No 292
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=29.33 E-value=3.3e+02 Score=23.31 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=26.8
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCC
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK 47 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~ 47 (228)
|--++....|+.+-..+. ..+..+|..|.++++-+.
T Consensus 136 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs 172 (479)
T cd07116 136 PLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPA 172 (479)
T ss_pred ccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 445788888887665443 346799999999999764
No 293
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=29.10 E-value=2e+02 Score=28.39 Aligned_cols=59 Identities=14% Similarity=0.047 Sum_probs=46.3
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEec
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVV 68 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~ 68 (228)
.++.++|+|...++-+.. +...+++++..|+.++..+. ..++.+...++..++..+...
T Consensus 290 ~gv~~g~~V~i~~~~~~~--~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 290 TGIKRGDVVMIYAYRGVD--LVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred hCCCCCCEEEEEecCCHH--HHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEe
Confidence 478899999998887665 33447899999999998864 567778888888888777654
No 294
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=29.09 E-value=3.2e+02 Score=23.39 Aligned_cols=55 Identities=9% Similarity=0.063 Sum_probs=35.8
Q ss_pred cEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEec
Q 027096 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~l~~~ 68 (228)
-+++...|+.+-..+. ..+..+|..|.++++-+. . ....+.+++.+. ....+.++
T Consensus 141 Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v 202 (472)
T TIGR03250 141 GVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVV 202 (472)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEE
Confidence 7888888987765332 237789999999999864 2 334466666664 33444443
No 295
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=28.70 E-value=3.8e+02 Score=23.10 Aligned_cols=50 Identities=6% Similarity=-0.099 Sum_probs=35.3
Q ss_pred CCCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
.|--+++..+|+.+-..+. ..+..+|..|.++++-+.. ....+.+++.+.
T Consensus 153 ~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea 207 (500)
T cd07083 153 VGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA 207 (500)
T ss_pred eccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc
Confidence 4556889999998875443 3467999999999998642 344566666654
No 296
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=28.63 E-value=1.1e+02 Score=23.45 Aligned_cols=43 Identities=21% Similarity=0.468 Sum_probs=26.9
Q ss_pred CCCCceEEEEecCcccccccccccCCCeEEcCceEEE---------c-CCCcEEEecccCC
Q 027096 165 PPNQLGEIWLRGPNMMRATKLTIDKKGWVHTGDLGYF---------D-GDGQLYVVDRIKE 215 (228)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~TGD~~~~---------~-~~g~~~~~GR~~d 215 (228)
.+|..+|||+.-+.- + --||+.+.+.|+. + ..|.++|+.+..|
T Consensus 171 ~PgiiaELC~SDDP~-------Y-tTGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~~d 223 (239)
T PF03744_consen 171 APGIIAELCWSDDPD-------Y-TTGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGSID 223 (239)
T ss_pred CCcceEEEEecCCCC-------C-ceEEEEeCCcceEECccccccCCCCCCEEEEEeCCCC
Confidence 368889999964221 1 3467778787664 1 3477887766543
No 297
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=28.60 E-value=3.7e+02 Score=22.82 Aligned_cols=57 Identities=18% Similarity=0.082 Sum_probs=35.2
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~l~~~ 68 (228)
|--+++..+|+.+-... ...+..+|..|.++++.+. . ....+.+.+.+. ....+..+
T Consensus 119 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v 182 (457)
T cd07114 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVV 182 (457)
T ss_pred cceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEE
Confidence 33578888888665433 2346789999999999864 2 334456666653 33444443
No 298
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=28.42 E-value=3.2e+02 Score=23.42 Aligned_cols=57 Identities=12% Similarity=-0.036 Sum_probs=36.7
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~ 68 (228)
|--+++..+|+.+-..+.. .+..+|..|.++++-+.. +...+.+++.+. ....+.++
T Consensus 139 P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v 202 (481)
T TIGR03216 139 PLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVV 202 (481)
T ss_pred ccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEE
Confidence 4458888889877654422 356899999999997642 344566666663 33344444
No 299
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=28.23 E-value=2.5e+02 Score=25.33 Aligned_cols=61 Identities=13% Similarity=0.123 Sum_probs=47.7
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 10 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
..++|+|...+|-+.. +...+++++..|+..+... ...++++...+++.++..++......
T Consensus 252 ~~~gd~Val~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~ 313 (718)
T PRK08043 252 SVEGERIGLMLPNATI--SAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFL 313 (718)
T ss_pred cCCCceEEEEcCCcHH--HHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHH
Confidence 4789999999987765 3344678888999888775 46788999999999999888766543
No 300
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=28.17 E-value=3e+02 Score=23.30 Aligned_cols=57 Identities=9% Similarity=0.019 Sum_probs=35.7
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~ 68 (228)
|-.+++..+|+.+-..+. ..+..+|..|.++++-+.. +...+.+++++. ....+..+
T Consensus 123 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v 186 (452)
T cd07147 123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVL 186 (452)
T ss_pred ceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEE
Confidence 446777888876654332 2367899999999997642 344566667664 33444433
No 301
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=27.97 E-value=3.5e+02 Score=23.12 Aligned_cols=58 Identities=16% Similarity=0.032 Sum_probs=36.6
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
|--+++..+|+.+-..+. ..+..+|..|.++++-+.. ....+.+++.+. ....+.+++
T Consensus 142 P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~ 206 (477)
T cd07113 142 PVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVN 206 (477)
T ss_pred ecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEe
Confidence 345688888887665433 2356899999999997642 334556666653 334444443
No 302
>PRK06145 acyl-CoA synthetase; Validated
Probab=27.81 E-value=3.1e+02 Score=23.13 Aligned_cols=61 Identities=5% Similarity=-0.013 Sum_probs=45.7
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechH
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 70 (228)
.++++++++...++-+-. +...+++++..|+..+..+ ....+.+...++..++..+...+.
T Consensus 47 ~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~ 108 (497)
T PRK06145 47 RGIGQGDVVALLMKNSAA--FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEE 108 (497)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccc
Confidence 467888998888775543 3333678899999888775 467888888888888887776543
No 303
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=27.53 E-value=4e+02 Score=22.90 Aligned_cols=50 Identities=14% Similarity=0.132 Sum_probs=34.6
Q ss_pred CCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
.|--+++...|+.+-..+.. .+..+|..|.++++-+.. +...+.+++++.
T Consensus 146 ~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 200 (480)
T cd07111 146 KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA 200 (480)
T ss_pred eecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 45568899999877655422 366899999999998642 344566666654
No 304
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=27.49 E-value=3.9e+02 Score=22.95 Aligned_cols=49 Identities=10% Similarity=-0.061 Sum_probs=33.0
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++...|+.+-..+. ..+..+|..|.++++-+.. +...+.+++++.
T Consensus 142 PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~a 195 (488)
T PRK13252 142 PLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA 195 (488)
T ss_pred eeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHc
Confidence 335778888887754433 2357899999999997642 345566777663
No 305
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=26.93 E-value=95 Score=25.53 Aligned_cols=44 Identities=16% Similarity=0.440 Sum_probs=29.8
Q ss_pred EEEEecCcccccccccccCCCeEEcCceEEEcCCCcEEEecccCCceeecCeEee
Q 027096 171 EIWLRGPNMMRATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 225 (228)
Q Consensus 171 el~v~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 225 (228)
.|.|.|.+-...+.....-+||..+ .++++|++. +|+++|.+|.
T Consensus 78 TIFIGGNHEAsnyL~eLpyGGwVAp----------NIyYlG~ag-Vv~~~gvRIg 121 (456)
T KOG2863|consen 78 TIFIGGNHEASNYLQELPYGGWVAP----------NIYYLGYAG-VVNFGGVRIG 121 (456)
T ss_pred EEEecCchHHHHHHHhcccCceecc----------ceEEeeecc-eEEECCEEEe
Confidence 5677776655544444445667643 488889865 8999999885
No 306
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=26.68 E-value=62 Score=24.77 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=26.8
Q ss_pred CceEEEEcccCCCHHHHHHHHHhCCCCeEEeccccc
Q 027096 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLT 123 (228)
Q Consensus 88 ~lr~~~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~t 123 (228)
+-..++.+|.-+++++++.++. +++++|..++|
T Consensus 28 ~advviYAGSLV~~elL~~~~~---~aei~nSa~~t 60 (254)
T COG2875 28 KADVVIYAGSLVPPELLEYCRP---DAEIVNSASLT 60 (254)
T ss_pred hCCEEEECCCcCCHHHHhhcCC---CCEEEecCcCC
Confidence 3457889999999999987654 78899988877
No 307
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=26.64 E-value=4e+02 Score=22.67 Aligned_cols=49 Identities=20% Similarity=0.168 Sum_probs=33.1
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++...|+.+-..+.. .+..+|..|.++++-+.. ....+.+++.+.
T Consensus 137 P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 190 (471)
T cd07139 137 PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEA 190 (471)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHc
Confidence 4457888888876655432 357899999999998642 344556666653
No 308
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=26.29 E-value=3.9e+02 Score=23.30 Aligned_cols=47 Identities=9% Similarity=0.037 Sum_probs=29.8
Q ss_pred cEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 027096 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (228)
-++....|+.+-..+....+.+.+.|.++++-+. . ....+.+++.+.
T Consensus 172 GVv~~I~PwNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~l~~a 222 (522)
T cd07123 172 GFVYAVSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEA 222 (522)
T ss_pred ceEEEECCcccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHc
Confidence 7788889987765444433343447999998764 2 344556666653
No 309
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=26.19 E-value=79 Score=20.53 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=21.0
Q ss_pred EEcCceEEEcCCCcE-------EEecccCCceeecCeE
Q 027096 193 VHTGDLGYFDGDGQL-------YVVDRIKELIKYKGFQ 223 (228)
Q Consensus 193 ~~TGD~~~~~~~g~~-------~~~GR~~d~i~~~G~~ 223 (228)
|+-||.+-+.-|+.+ ++.||...+++..|.-
T Consensus 35 y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~A 72 (98)
T PRK04306 35 FEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGRA 72 (98)
T ss_pred ccCCCEEEEEecCceecCCccccccCCCEEEEeecCeE
Confidence 677788777666654 4677777777666543
No 310
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.18 E-value=4.1e+02 Score=22.62 Aligned_cols=92 Identities=11% Similarity=-0.007 Sum_probs=52.2
Q ss_pred ccccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEec----hHHHHHHHhcCC
Q 027096 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVV----PPLILALAKHGL 80 (228)
Q Consensus 6 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~----p~~~~~l~~~~~ 80 (228)
..+|++++|+++.-+|--- .+...+|.-|-.|..-|+. +.....++-..++...++.+... +.-++.+++.
T Consensus 71 ~~lGi~~Gd~vlvQLpN~~--ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~-- 146 (542)
T COG1021 71 RRLGIKPGDTVLVQLPNVA--EFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARE-- 146 (542)
T ss_pred HhcCCCCCCEEEEECCchH--HHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHH--
Confidence 3579999999999988544 4555466667777776665 33334444444444444333211 1112222221
Q ss_pred CCCCCCCCceEEEEcccCCCHH
Q 027096 81 VKKFDLSSLKLVGSGAAPLGKE 102 (228)
Q Consensus 81 ~~~~~~~~lr~~~~~G~~l~~~ 102 (228)
--.+.+++|++++.|+.=.+.
T Consensus 147 -~~a~~~tlr~v~v~ge~~~~~ 167 (542)
T COG1021 147 -LVAKHPTLRHVIVAGEAEHPS 167 (542)
T ss_pred -HHhhCCcceEEEEccCCCCcc
Confidence 112357899999998875443
No 311
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=26.03 E-value=4.2e+02 Score=22.67 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=35.7
Q ss_pred CcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
--+++...|+.+-..+. ..+..+|..|.++++-+.. +...+.+++.+. ....+..++
T Consensus 135 ~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~ 198 (482)
T cd07119 135 VGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVT 198 (482)
T ss_pred eeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 34788888876544332 2366899999999998642 344566666653 444444443
No 312
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=25.68 E-value=3.6e+02 Score=23.53 Aligned_cols=35 Identities=14% Similarity=-0.090 Sum_probs=25.3
Q ss_pred CcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCC
Q 027096 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK 47 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~ 47 (228)
.-+++...|+.+-..+ ...+..+|..|.++++-+.
T Consensus 149 ~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs 184 (521)
T PRK11903 149 RGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPA 184 (521)
T ss_pred cceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4788888887665432 2235699999999999864
No 313
>PF14617 CMS1: U3-containing 90S pre-ribosomal complex subunit
Probab=25.66 E-value=2.2e+02 Score=22.11 Aligned_cols=49 Identities=24% Similarity=0.215 Sum_probs=37.4
Q ss_pred CHHHHHHHHHhcCceEEEechHHHHHHHhcCCCCCCCCCCceEEEEcccCCC
Q 027096 49 DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLG 100 (228)
Q Consensus 49 ~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~ 100 (228)
-.++-+..++..++.+..++|.-+..|++. ....+.+++.+++-...++
T Consensus 165 Kl~eqv~~L~~~~~~i~vGTP~Rl~kLle~---~~L~l~~l~~ivlD~s~~D 213 (252)
T PF14617_consen 165 KLEEQVKLLKKTRVHIAVGTPGRLSKLLEN---GALSLSNLKRIVLDWSYLD 213 (252)
T ss_pred cHHHHHHHHHhCCceEEEeChHHHHHHHHc---CCCCcccCeEEEEcCCccc
Confidence 445556677778999999999999999865 4456788999988776444
No 314
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=25.56 E-value=4.1e+02 Score=22.42 Aligned_cols=57 Identities=16% Similarity=-0.024 Sum_probs=36.4
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~ 68 (228)
+--+++..+|+.+-..+ ...+..+|..|.++++-+.. +...+.+++.+. ....+.++
T Consensus 119 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v 182 (451)
T cd07150 119 PLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVV 182 (451)
T ss_pred cccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEe
Confidence 34588888898765432 23368999999999998642 344556666653 33444443
No 315
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=25.33 E-value=4.2e+02 Score=22.47 Aligned_cols=50 Identities=14% Similarity=0.014 Sum_probs=34.7
Q ss_pred CCCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
.|--+++...|+.+-..+ ...+..+|..|.++++-+.. ....+.+++++.
T Consensus 118 ~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a 172 (454)
T cd07118 118 EPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA 172 (454)
T ss_pred ecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 345688899998776554 33477999999999997642 344566666664
No 316
>PRK07638 acyl-CoA synthetase; Validated
Probab=25.22 E-value=3.7e+02 Score=22.64 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=43.1
Q ss_pred CCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEech
Q 027096 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p 69 (228)
.++++...++-+.. +...+++++..|+..+..+ ..+++.+...++..+++.+....
T Consensus 49 ~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~ 105 (487)
T PRK07638 49 KNKTIAILLENRIE--FLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTER 105 (487)
T ss_pred CCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEec
Confidence 56777777775543 3444788899999999886 46888999999999888887665
No 317
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=24.98 E-value=3.8e+02 Score=25.13 Aligned_cols=67 Identities=16% Similarity=0.001 Sum_probs=40.5
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHh------cCceEEEech----HHHHHHH
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEK------HRVTHIWVVP----PLILALA 76 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~------~~~t~l~~~p----~~~~~l~ 76 (228)
|--+++..+|+.+-..+.. .+..+|.+|.++++-+.. +...+.+++++ ....++.+++ .....|+
T Consensus 108 P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~ 187 (862)
T PRK13805 108 PVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALM 187 (862)
T ss_pred cceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHH
Confidence 3357778888876554433 467899999999998752 23344555543 3445555554 2345555
Q ss_pred hc
Q 027096 77 KH 78 (228)
Q Consensus 77 ~~ 78 (228)
++
T Consensus 188 ~~ 189 (862)
T PRK13805 188 NH 189 (862)
T ss_pred cC
Confidence 44
No 318
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=24.68 E-value=4.3e+02 Score=22.34 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=36.5
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~l~~~ 68 (228)
+--+++...|+.+-..+ ...+..+|..|.++++-+. . ....+.+.+.+. ....+..+
T Consensus 123 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v 186 (453)
T cd07094 123 PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVV 186 (453)
T ss_pred ccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEE
Confidence 44567888888765332 3347899999999999764 2 344566666663 44444444
No 319
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=24.67 E-value=4.3e+02 Score=22.38 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=26.4
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCC
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK 47 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~ 47 (228)
|--+++..+|+.+-..+. ..+..+|..|.++++-+.
T Consensus 116 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps 152 (456)
T cd07107 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPP 152 (456)
T ss_pred cceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCC
Confidence 445888888986654332 246789999999999864
No 320
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=24.61 E-value=4.4e+02 Score=22.39 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=26.6
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCC
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK 47 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~ 47 (228)
|--+++..+|+.+-..... .+..+|..|.++++-+.
T Consensus 95 P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps 131 (436)
T cd07122 95 PVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPH 131 (436)
T ss_pred cccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECC
Confidence 4457888888876654433 36799999999999874
No 321
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=24.56 E-value=2.9e+02 Score=24.03 Aligned_cols=58 Identities=14% Similarity=0.008 Sum_probs=36.6
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
|--+++..+|+.+-..+ ...+..+|..|.++++-+.. ....+.+++.+. ....+..++
T Consensus 154 P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~ 218 (524)
T PRK09407 154 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVT 218 (524)
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEe
Confidence 44588888887665332 23477999999999998642 334456666654 334444443
No 322
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=24.55 E-value=1.9e+02 Score=18.18 Aligned_cols=18 Identities=11% Similarity=0.193 Sum_probs=14.1
Q ss_pred CccccCCCceEEEEeCCCC
Q 027096 143 SAGALAPGVEALIVSVDTQ 161 (228)
Q Consensus 143 ~~g~p~~~~~~~i~d~~~~ 161 (228)
.-|.|+++..++++| .+|
T Consensus 16 ~~G~Pv~gAyVRLLD-~sg 33 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLD-SSG 33 (85)
T ss_pred cCCcCCCCeEEEEEc-CCC
Confidence 357799999999999 444
No 323
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=24.53 E-value=2.5e+02 Score=21.40 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=50.7
Q ss_pred HHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEE--------------EechHHHHHHHhcCCCCCCCCCCceEEEE
Q 027096 31 ITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHI--------------WVVPPLILALAKHGLVKKFDLSSLKLVGS 94 (228)
Q Consensus 31 ~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~l--------------~~~p~~~~~l~~~~~~~~~~~~~lr~~~~ 94 (228)
+++.++.-|...-++. +.+...+-+.++++.++.. ...|.-+++++.+.-.+..+...-..++.
T Consensus 101 sv~~A~~vgrrfsViTtt~rs~~il~~lv~~~g~s~~~~~vrstdl~vL~l~~~~~~~~~~l~~~~~~a~~edgAeaIiL 180 (230)
T COG4126 101 SVLAALFVGRRFSVITTTERSRPILEELVRSYGLSRHCRSVRSTDLPVLALEGPPEEAEALLVIEAAEALKEDGAEAIIL 180 (230)
T ss_pred HHHHHHHhcceEEEEecCcccHHHHHHHHHhcCccccccceeeCCCCcccccCChHHHHHHHHHHHHHHhhhcCCCEEEE
Confidence 3556677777765553 2355556666665544432 22355555554433223333445667888
Q ss_pred cccCCCHHHHHHHHHhCCCCeEEec
Q 027096 95 GAAPLGKELMEECAKNVPSATVIQG 119 (228)
Q Consensus 95 ~G~~l~~~~~~~~~~~~~~~~l~~~ 119 (228)
|+..++.- .+++++.| +.+++..
T Consensus 181 GCAGms~l-a~~Lq~~~-gvPVIDg 203 (230)
T COG4126 181 GCAGMSDL-ADQLQKAF-GVPVIDG 203 (230)
T ss_pred cCccHHHH-HHHHHHHh-CCCcccc
Confidence 88888754 77888888 6776654
No 324
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=24.03 E-value=4.6e+02 Score=22.40 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=25.6
Q ss_pred CcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCC
Q 027096 13 DYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK 47 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~ 47 (228)
--+++...|+.+-..+.. .+..+|..|.++++-+.
T Consensus 139 ~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps 174 (475)
T PRK13473 139 VGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPS 174 (475)
T ss_pred ceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECC
Confidence 357888899877554432 35689999999999764
No 325
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=23.75 E-value=4.8e+02 Score=22.54 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=26.7
Q ss_pred CCcEEEEecchhhHHhHHHH-HHHHhhcCcEEEEcCC
Q 027096 12 LDYVFLCVLPLFHVFGLAVI-TCGQLQKGSCIILMAK 47 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~~-~~~~l~~G~~~~~~~~ 47 (228)
|--++....|+.+-...... ...+|.+|.++++-+.
T Consensus 104 PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps 140 (488)
T TIGR02518 104 PVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPH 140 (488)
T ss_pred cceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECC
Confidence 44578888888776544443 6689999999999875
No 326
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=23.75 E-value=4.4e+02 Score=22.13 Aligned_cols=49 Identities=16% Similarity=0.101 Sum_probs=33.7
Q ss_pred CCCcEEEEecchhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 11 ELDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
.|--+++..+|+.+-.. ....+..+|..|.++++-+.. ....+.+++.+
T Consensus 95 ~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~ 148 (429)
T cd07100 95 EPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFRE 148 (429)
T ss_pred EeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH
Confidence 34567888899876543 233477999999999997642 34456666666
No 327
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=23.18 E-value=1.7e+02 Score=22.05 Aligned_cols=37 Identities=19% Similarity=0.096 Sum_probs=29.1
Q ss_pred ccCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC
Q 027096 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA 46 (228)
Q Consensus 8 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 46 (228)
++++++|++...+|-+..+ ...++.++..|+.++...
T Consensus 48 ~Gv~~GdrV~i~~~n~~~~--~~~~~a~~~~G~v~vp~n 84 (227)
T TIGR03089 48 LDAEPGSRVALDLPAHWQT--AVWLLAAWSTGVEVVLAG 84 (227)
T ss_pred hCCCCCCEEEEECCCCHHH--HHHHHHHHHcCCEEEeCC
Confidence 6899999999999976553 333678899999988773
No 328
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=22.93 E-value=4.6e+02 Score=22.09 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=36.9
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
+--+++...|+.+-..+ ...+..+|..|.++++-+.. ....+.+.+.+. ....+..++
T Consensus 123 P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~ 187 (453)
T cd07149 123 PIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVT 187 (453)
T ss_pred cceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEee
Confidence 44578888887665422 33467899999999998642 344566666663 334444443
No 329
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=22.92 E-value=4.6e+02 Score=22.05 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=24.6
Q ss_pred cEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCC
Q 027096 14 YVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK 47 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~ 47 (228)
.++-..+|+.+-+.... -.-++|..|+++++-|.
T Consensus 161 GV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs 195 (503)
T KOG2451|consen 161 GVVALITPWNFPAAMITRKAGAALAAGCTVVVKPS 195 (503)
T ss_pred eeEEEecCcCChHHHHHhHHHHHHhcCceEEEccC
Confidence 46677888877666543 23478999999998774
No 330
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=22.88 E-value=4.2e+02 Score=21.53 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=34.4
Q ss_pred CCcEEEEecchhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC
Q 027096 12 LDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR 61 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~ 61 (228)
+--+++...|..+-.. ....++.+|..|.++++.+.. ....+.+.+.+..
T Consensus 92 p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag 146 (367)
T cd06534 92 PLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAG 146 (367)
T ss_pred eeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcC
Confidence 4557888888776644 444578999999999997642 3445666666543
No 331
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=22.44 E-value=2.3e+02 Score=18.41 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=31.7
Q ss_pred hhhHHhHHHHHHHHhhc-CcEEEEcCC-CCHHHHHHHHHhcCceEEEec
Q 027096 22 LFHVFGLAVITCGQLQK-GSCIILMAK-FDLEMFLRAIEKHRVTHIWVV 68 (228)
Q Consensus 22 ~~~~~g~~~~~~~~l~~-G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~ 68 (228)
-.|..|+.. +...|-. |..+.+.+. .+.+.+.+.+.+.+++.+..+
T Consensus 11 ~~~~lGl~~-la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS 58 (121)
T PF02310_consen 11 EVHPLGLLY-LAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGIS 58 (121)
T ss_dssp SSTSHHHHH-HHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEE
T ss_pred cchhHHHHH-HHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 355667766 5555555 888877754 467999999999988876553
No 332
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=22.39 E-value=6e+02 Score=23.19 Aligned_cols=84 Identities=17% Similarity=0.085 Sum_probs=56.1
Q ss_pred HHHHhhcCcEEEE-cCCCCHHHHHHHHHhcCceEEEec-hHHHHHHHhcCCCCCCCCCCceEEEEcccCCCHHHHHHHHH
Q 027096 32 TCGQLQKGSCIIL-MAKFDLEMFLRAIEKHRVTHIWVV-PPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAK 109 (228)
Q Consensus 32 ~~~~l~~G~~~~~-~~~~~~~~~~~~i~~~~~t~l~~~-p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~ 109 (228)
-+++...|..++. .+...++.+..++.+-.+.++++- +..+..|++... ...+++||.++.-.++ +.++.++..+
T Consensus 150 ~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~--~~~~~~LK~iI~~~~~-~~~~~~~~~~ 226 (691)
T KOG1256|consen 150 EMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKE--NDSLPSLKAIIQLDEP-SDELKEKAEN 226 (691)
T ss_pred HHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcc--cccCccceeEEEecCC-chhhhhhhhc
Confidence 4455555665555 467899999999999999999888 888998887632 2236789988876654 3444444333
Q ss_pred hCCCCeEEecc
Q 027096 110 NVPSATVIQGY 120 (228)
Q Consensus 110 ~~~~~~l~~~y 120 (228)
. +.+++...
T Consensus 227 ~--gv~v~S~~ 235 (691)
T KOG1256|consen 227 N--GVEVYSWD 235 (691)
T ss_pred C--CeEEEEHH
Confidence 2 45555443
No 333
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=22.30 E-value=4.9e+02 Score=22.12 Aligned_cols=49 Identities=20% Similarity=0.156 Sum_probs=33.7
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
+--+++..+|+.+-... ...+..+|..|.++++-+.. ....+.+++++.
T Consensus 133 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~a 186 (468)
T cd07088 133 PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEA 186 (468)
T ss_pred cceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 44578888888766543 33478999999999998642 344566666653
No 334
>PF06183 DinI: DinI-like family; InterPro: IPR010391 This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity []. The structure of DinI is known [].; PDB: 1GHH_A.
Probab=22.15 E-value=47 Score=19.69 Aligned_cols=25 Identities=28% Similarity=0.305 Sum_probs=18.3
Q ss_pred CCHHHHHHHHHhCCCCeEEeccccc
Q 027096 99 LGKELMEECAKNVPSATVIQGYGLT 123 (228)
Q Consensus 99 l~~~~~~~~~~~~~~~~l~~~yG~t 123 (228)
+..++.+++.+.||++.+.-.+|++
T Consensus 9 L~~EL~kRl~~~yPd~~v~Vr~~s~ 33 (65)
T PF06183_consen 9 LESELTKRLHRQYPDAEVRVRPGSA 33 (65)
T ss_dssp HHHHHHHHHHHH-SS-EEEEEEESS
T ss_pred HHHHHHHHHHHHCCCceEeeeeccc
Confidence 4567888899999998888777765
No 335
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=22.06 E-value=2.8e+02 Score=23.83 Aligned_cols=48 Identities=10% Similarity=-0.009 Sum_probs=32.4
Q ss_pred CCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC-C---HHHHHHHHHh
Q 027096 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF-D---LEMFLRAIEK 59 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~ 59 (228)
|--++....|+.+-..+.. .+..+|..|.++++-+.. . ...+.+++.+
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~ 198 (482)
T PRK11241 146 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIR 198 (482)
T ss_pred eceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHH
Confidence 4458889999877655432 366889999999998642 2 3344555555
No 336
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=22.00 E-value=4e+02 Score=22.89 Aligned_cols=49 Identities=12% Similarity=-0.006 Sum_probs=32.8
Q ss_pred CCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++...|+.+-..+. ..+..+|..|.++++-+.. ....+.+++.+.
T Consensus 135 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 188 (488)
T TIGR02299 135 PVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEA 188 (488)
T ss_pred ecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHc
Confidence 446788888887664432 2366899999999998642 334456666664
No 337
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=21.93 E-value=4.7e+02 Score=22.91 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=33.2
Q ss_pred cEEEEecchhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEech
Q 027096 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (228)
Q Consensus 14 d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~p 69 (228)
-+++...|+.+-..+......+.+.|.++++-+.. ....+.+++.+. ....+..++
T Consensus 172 GVv~~I~PwN~P~~~~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~ 233 (533)
T TIGR01236 172 GFVYAISPFNFTAIAGNLPGAPALMGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVP 233 (533)
T ss_pred CEEEEEeCCchHHHHHHHHHHHHHhCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEe
Confidence 67888888877654444333333379999997642 344566666653 344444443
No 338
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=21.90 E-value=5.3e+02 Score=22.33 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=33.8
Q ss_pred CCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCC-C---CHHHHHHHHHh
Q 027096 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK-F---DLEMFLRAIEK 59 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~ 59 (228)
.|--+++..+|+.+-..+.. .+..+|..|.++++-+. . +...+.+.+.+
T Consensus 141 ~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~ 194 (489)
T cd07126 141 WPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL 194 (489)
T ss_pred ecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 35568889999877654443 37799999999999764 2 33445555554
No 339
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=21.79 E-value=5.5e+02 Score=24.73 Aligned_cols=62 Identities=15% Similarity=0.075 Sum_probs=48.5
Q ss_pred cCCCCcEEEEecchhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEechHHH
Q 027096 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (228)
Q Consensus 9 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~ 72 (228)
+..++|++...+|-+... ...+++.+..|+..+..+ ....+++...+++.+++.+...+...
T Consensus 678 g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 740 (1140)
T PRK06814 678 NTPPGENVGVMLPNANGA--AVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFI 740 (1140)
T ss_pred cCCCCCeEEEEcCCchHH--HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHH
Confidence 678899999888876653 333678899998887775 46888999999999999988776543
No 340
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=21.76 E-value=5.2e+02 Score=22.19 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=32.5
Q ss_pred CCCcEEEEecchhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
.|--++...+|+.+-..+.. .+..+|..|.++++-+.. +...+.+++++
T Consensus 135 ~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~ 188 (480)
T cd07559 135 EPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGD 188 (480)
T ss_pred eccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHH
Confidence 34468899999877655432 357899999999998642 23344555544
No 341
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=21.65 E-value=5.4e+02 Score=23.31 Aligned_cols=57 Identities=11% Similarity=-0.099 Sum_probs=36.5
Q ss_pred cEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHh---cCceEEEechH
Q 027096 14 YVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEK---HRVTHIWVVPP 70 (228)
Q Consensus 14 d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~---~~~t~l~~~p~ 70 (228)
-++....|+.+-..+ ...+..+|..|.++++-+. . ....+.+++.+ .....+.+++.
T Consensus 150 GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g 214 (675)
T PRK11563 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICG 214 (675)
T ss_pred ceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeC
Confidence 677778888654332 3347799999999999764 2 34556667666 33445555543
No 342
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=21.50 E-value=5.1e+02 Score=22.56 Aligned_cols=57 Identities=11% Similarity=-0.026 Sum_probs=36.5
Q ss_pred CcEEEEecchhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh---cCceEEEech
Q 027096 13 DYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEK---HRVTHIWVVP 69 (228)
Q Consensus 13 ~d~~~~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~---~~~t~l~~~p 69 (228)
.-+++...|+.+-.. ....+..+|..|.++++-+.. ....+.+++.+ .....+..++
T Consensus 145 ~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~ 209 (513)
T cd07128 145 RGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLIC 209 (513)
T ss_pred ccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEec
Confidence 367788888765432 223477999999999997642 34456677766 3445555554
No 343
>PRK11121 nrdG anaerobic ribonucleotide reductase-activating protein; Provisional
Probab=21.29 E-value=1.7e+02 Score=20.55 Aligned_cols=11 Identities=45% Similarity=0.522 Sum_probs=8.7
Q ss_pred EEEEcccCCCH
Q 027096 91 LVGSGAAPLGK 101 (228)
Q Consensus 91 ~~~~~G~~l~~ 101 (228)
..++||||+-+
T Consensus 69 vt~sGGEPl~~ 79 (154)
T PRK11121 69 LSLSGGDPLHP 79 (154)
T ss_pred EEEECCCccch
Confidence 57789999863
No 344
>PF05748 Rubella_E1: Rubella membrane glycoprotein E1; InterPro: IPR008820 Rubella virus (RV), the sole member of the genus Rubivirus within the family Togaviridae, is a small enveloped, positive strand RNA virus. The nucleocapsid consists of 40S genomic RNA and a single species of capsid protein which is enveloped within a host-derived lipid bilayer containing two viral glycoproteins, E1 (58 kDa) and E2 (42-46 kDa). In virus infected cells, RV matures by budding either at the plasma membrane, or at the internal membranes depending on the cell type and enters adjacent uninfected cells by a membrane fusion process in the endosome, directed by E1-E2 heterodimers. The heterodimer formation is crucial for E1 transport out of the endoplasmic reticulum to the Golgi and plasma membrane. In RV E1, a cysteine at position 82 is crucial for the E1-E2 heterodimer formation and cell surface expression of the two proteins. E1 has been shown to be a type 1 membrane protein, rich in cysteine residues with extensive intramolecular disulphide bonds []. This family is found together with IPR008819 from INTERPRO and IPR008821 from INTERPRO.; GO: 0016021 integral to membrane, 0019013 viral nucleocapsid
Probab=21.17 E-value=3e+02 Score=21.51 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=41.8
Q ss_pred CHHHHHHHHHhCCCCeEEecccccccCCceeeccCCC-CCCC-CCCccccCCCceEEEEeCCCCCCCCCCCceEEEEec
Q 027096 100 GKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-GSRN-IGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRG 176 (228)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~~~yG~tE~g~~~~~~~~~~-~~~~-~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 176 (228)
+.++.+.+++-.++..-....|+..+-+.-...+... ...+ ...+|.--..-+++++|.++.-....-.+||+||+-
T Consensus 215 pgdlveyimnytgnqqsrwglgspnchgpdwaspvcqrhspdcsrlvgatperprlrlvdaddpllrtapgpgevwvtp 293 (496)
T PF05748_consen 215 PGDLVEYIMNYTGNQQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTP 293 (496)
T ss_pred chHHHHHHHhccCcccccccCCCCCCCCCCccchhhhccCCchhhhhcCCCCCCceeeecCCCcceecCCCCCceeEee
Confidence 4567777777655555555666665443322221111 0111 123565556678999996554333334569999863
No 345
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=21.08 E-value=5.2e+02 Score=21.95 Aligned_cols=49 Identities=12% Similarity=0.158 Sum_probs=33.5
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (228)
|--+++..+|+.+-..+ ...+..+|..|.++++-+.. +...+.+++.+.
T Consensus 124 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 177 (455)
T cd07148 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA 177 (455)
T ss_pred cceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHc
Confidence 44677888887665433 33467899999999997642 345566777663
No 346
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=20.95 E-value=78 Score=21.34 Aligned_cols=19 Identities=21% Similarity=0.372 Sum_probs=14.4
Q ss_pred CCccccCCCceEEEEeCCC
Q 027096 142 GSAGALAPGVEALIVSVDT 160 (228)
Q Consensus 142 ~~~g~p~~~~~~~i~d~~~ 160 (228)
...|+|.+++++.+...+.
T Consensus 18 ta~GkPAagv~V~L~rl~~ 36 (124)
T COG2351 18 TASGKPAAGVKVELYRLEG 36 (124)
T ss_pred cccCCcCCCCEEEEEEecC
Confidence 3578999999988876443
No 347
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=20.48 E-value=5.2e+02 Score=21.76 Aligned_cols=49 Identities=14% Similarity=0.061 Sum_probs=33.4
Q ss_pred CCCcEEEEecchhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 027096 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (228)
Q Consensus 11 ~~~d~~~~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (228)
.+--+++...|+.+-..+. ..+..+|..|.++++-+.. ....+.+.+.+
T Consensus 96 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ 149 (431)
T cd07095 96 RPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEE 149 (431)
T ss_pred ecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHH
Confidence 3556888999987655432 3467889999999998642 33445566655
No 348
>PF12503 CMV_1a_C: Cucumber mosaic virus 1a protein C terminal ; InterPro: IPR022184 This domain family is found in viruses, and is approximately 90 amino acids in length. The family is found in association with PF01443 from PFAM, PF01660 from PFAM. There is a conserved GLG sequence motif. 1a protein is the major virulence factor of the (Cucumber mosaic virus. The Ns strain of CMV causes necrotic lesions to Nicotiana spp. while other strains cause systemic mosaic. The determinant of the pathogenesis of these different strains is the specific amino acid residue at the 461 residue of the 1a protein. ; GO: 0008168 methyltransferase activity, 0016817 hydrolase activity, acting on acid anhydrides
Probab=20.40 E-value=1.3e+02 Score=18.69 Aligned_cols=9 Identities=11% Similarity=0.457 Sum_probs=4.0
Q ss_pred cccCCCeEE
Q 027096 186 TIDKKGWVH 194 (228)
Q Consensus 186 ~~~~~~~~~ 194 (228)
.+...+|.+
T Consensus 34 Hf~~GrWm~ 42 (85)
T PF12503_consen 34 HFPNGRWMY 42 (85)
T ss_pred EecCCceec
Confidence 333444555
No 349
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=20.13 E-value=5.6e+02 Score=22.00 Aligned_cols=57 Identities=12% Similarity=0.007 Sum_probs=36.7
Q ss_pred CCcEEEEecchhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEec
Q 027096 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV 68 (228)
Q Consensus 12 ~~d~~~~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~l~~~ 68 (228)
|--+++..+|+.+-..+ ...+..+|..|.++++-+.. ....+.+++.+. ....+.++
T Consensus 134 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v 197 (487)
T PRK09457 134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLV 197 (487)
T ss_pred ccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEE
Confidence 44588889998766432 22367899999999997642 344556666664 33444444
Done!