Query 027097
Match_columns 228
No_of_seqs 249 out of 2052
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:39:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027097.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027097hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i4t_A Diphthine synthase; nia 100.0 6.1E-45 2.1E-49 318.7 17.0 221 1-226 22-243 (292)
2 2z6r_A Diphthine synthase; met 100.0 4.1E-38 1.4E-42 271.6 23.0 207 1-226 2-210 (265)
3 1wde_A Probable diphthine synt 100.0 6.5E-35 2.2E-39 255.4 18.5 205 1-226 9-221 (294)
4 1vhv_A Diphthine synthase; str 100.0 6.3E-34 2.2E-38 246.0 21.3 180 1-207 14-194 (268)
5 2ybo_A Methyltransferase; SUMT 100.0 4.1E-30 1.4E-34 225.0 19.0 161 1-171 26-195 (294)
6 1s4d_A Uroporphyrin-III C-meth 100.0 5.5E-30 1.9E-34 222.7 19.4 162 1-172 16-187 (280)
7 3ndc_A Precorrin-4 C(11)-methy 100.0 5.5E-30 1.9E-34 221.1 18.7 161 1-171 5-170 (264)
8 1cbf_A Cobalt-precorrin-4 tran 100.0 1.1E-29 3.9E-34 221.1 20.3 161 1-171 22-186 (285)
9 4e16_A Precorrin-4 C(11)-methy 100.0 1.4E-29 4.8E-34 217.1 20.5 162 1-171 6-170 (253)
10 1ve2_A Uroporphyrin-III C-meth 100.0 8.5E-30 2.9E-34 215.9 15.9 151 1-171 4-162 (235)
11 1va0_A Uroporphyrin-III C-meth 100.0 7.8E-30 2.7E-34 216.6 15.3 154 1-171 2-161 (239)
12 2qbu_A Precorrin-2 methyltrans 100.0 3.1E-28 1.1E-32 205.3 20.4 158 1-171 4-178 (232)
13 2e0n_A Precorrin-2 C20-methylt 100.0 1.1E-28 3.7E-33 212.0 15.5 160 1-172 6-183 (259)
14 1wyz_A Putative S-adenosylmeth 100.0 4.2E-28 1.4E-32 206.7 16.9 123 1-132 4-138 (242)
15 1pjq_A CYSG, siroheme synthase 100.0 3.2E-28 1.1E-32 224.7 15.4 159 1-171 217-384 (457)
16 3kwp_A Predicted methyltransfe 100.0 1.3E-27 4.5E-32 209.3 16.3 154 1-171 17-176 (296)
17 2zvb_A Precorrin-3 C17-methylt 100.0 2.5E-27 8.6E-32 207.5 17.6 171 1-204 3-201 (295)
18 3nut_A Precorrin-3 methylase; 100.0 1.7E-27 5.8E-32 203.9 16.1 152 1-170 10-171 (251)
19 2npn_A Putative cobalamin synt 99.9 3E-26 1E-30 196.0 13.3 133 1-139 4-166 (251)
20 3nd1_A Precorrin-6A synthase/C 99.9 1.4E-24 4.7E-29 188.3 13.2 138 2-140 24-187 (275)
21 2bb3_A Cobalamin biosynthesis 99.9 1.4E-24 4.7E-29 182.6 10.4 148 1-173 23-172 (221)
22 3hh1_A Tetrapyrrole methylase 99.9 1.4E-23 4.8E-28 160.0 11.9 107 1-116 7-117 (117)
23 3ffy_A Putative tetrapyrrole ( 97.0 0.0029 9.8E-08 47.1 7.9 96 114-223 1-111 (115)
24 3mvn_A UDP-N-acetylmuramate:L- 72.1 25 0.00084 26.7 8.8 76 17-102 84-160 (163)
25 3sho_A Transcriptional regulat 57.3 60 0.002 24.5 8.9 100 62-172 25-125 (187)
26 2pju_A Propionate catabolism o 56.5 40 0.0014 27.3 7.6 65 13-90 49-117 (225)
27 2q5c_A NTRC family transcripti 54.9 73 0.0025 24.9 8.8 62 17-91 43-106 (196)
28 3kbq_A Protein TA0487; structu 48.3 59 0.002 25.2 7.0 53 5-60 42-94 (172)
29 3gx1_A LIN1832 protein; APC633 46.5 36 0.0012 25.0 5.3 46 71-121 52-99 (130)
30 2qip_A Protein of unknown func 40.0 47 0.0016 25.1 5.2 39 72-114 101-140 (165)
31 3gdw_A Sigma-54 interaction do 34.7 63 0.0022 24.0 5.1 36 80-121 64-101 (139)
32 3mcu_A Dipicolinate synthase, 30.9 46 0.0016 26.7 3.9 42 78-119 4-45 (207)
33 3lqk_A Dipicolinate synthase s 30.7 47 0.0016 26.4 3.9 41 78-118 6-46 (201)
34 3kkj_A Amine oxidase, flavin-c 29.4 23 0.0008 26.8 1.9 30 2-34 5-34 (336)
35 1mkz_A Molybdenum cofactor bio 28.6 1.3E+02 0.0044 22.9 6.1 32 5-36 47-80 (172)
36 1x92_A APC5045, phosphoheptose 28.0 1.6E+02 0.0055 22.3 6.7 110 65-180 30-157 (199)
37 3etn_A Putative phosphosugar i 27.4 2.1E+02 0.0071 22.3 7.4 111 62-182 40-154 (220)
38 1g63_A Epidermin modifying enz 27.1 64 0.0022 25.2 4.1 39 80-119 3-41 (181)
39 2ab1_A Hypothetical protein; H 25.4 1.6E+02 0.0056 21.2 5.8 40 80-119 62-101 (122)
40 3l7o_A Ribose-5-phosphate isom 24.8 1.3E+02 0.0045 24.4 5.7 61 69-134 8-73 (225)
41 2yva_A DNAA initiator-associat 23.9 2.3E+02 0.0079 21.2 7.6 102 66-171 27-146 (196)
42 3nav_A Tryptophan synthase alp 23.8 59 0.002 27.1 3.4 29 81-110 22-50 (271)
43 3can_A Pyruvate-formate lyase- 21.9 85 0.0029 23.5 3.8 31 83-113 7-38 (182)
44 3vnd_A TSA, tryptophan synthas 21.4 80 0.0027 26.2 3.8 28 81-109 20-47 (267)
45 3ixl_A Amdase, arylmalonate de 21.1 3E+02 0.01 22.0 7.2 87 18-115 57-150 (240)
46 1p9o_A Phosphopantothenoylcyst 20.7 1.7E+02 0.0057 24.9 5.8 43 78-120 35-92 (313)
47 1jeo_A MJ1247, hypothetical pr 20.2 1.8E+02 0.0061 21.6 5.4 79 80-171 41-119 (180)
No 1
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica}
Probab=100.00 E-value=6.1e-45 Score=318.66 Aligned_cols=221 Identities=56% Similarity=0.925 Sum_probs=177.0
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES 80 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~ 80 (228)
|||+||+||||+++||+||+++|++||+|+|+++++.. . .+.+ .++.+.++++...++..+++..+.+++.++++
T Consensus 22 ~l~lVG~GpGd~~~LT~rA~~~L~~ADvV~~e~~~s~~-~-~~~~---~L~~~~~~~~i~~~~~~~~~~~~~i~~~a~~~ 96 (292)
T 3i4t_A 22 MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAIL-Q-CDVA---KLEEFYGKKVIIGDRDLVETEADQILEPAKTK 96 (292)
T ss_dssp EEEEEECBSSSGGGSCHHHHHHHHHCSEEEECGGGGGS-S-SCHH---HHHHHHTSCCEEC-------CCCTTHHHHTTS
T ss_pred EEEEEEECCCChHHhhHHHHHHHHhCCEEEEecccccc-c-CCHH---HHHhCCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence 69999999999999999999999999999999886543 1 2344 56555566665555555666666777887779
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhc
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL 160 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~ 160 (228)
+||+|++|||++|+++.++++++.+.|++++|||||||++|+|++|+||++|+.+.++.|.+.|++|.++++.+++++..
T Consensus 97 ~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p~~~~~~~~~~l~~ 176 (292)
T 3i4t_A 97 NVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDN 176 (292)
T ss_dssp EEEEEESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCCCTHHHHHHHHHHT
T ss_pred CEEEEecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCCCccHHHHHHHhhc
Confidence 99999999999999999999999999999999999999998888999999999999999999999998889999999999
Q ss_pred CCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eecc
Q 027097 161 GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQ 226 (228)
Q Consensus 161 g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~ 226 (228)
+.+|+||+|++.+|+++++++|+++.|+|+|||++.+++++|++++++...+.+++++++++ .+++
T Consensus 177 ~~~Tlvl~d~~~~e~~~~~~~~~~~~y~p~r~m~~~~~~~~L~~~~~~l~~~g~~~dtpv~vv~~~t 243 (292)
T 3i4t_A 177 NMHTLVLLDIKVKERSEESIIKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVA 243 (292)
T ss_dssp TCBEEEEECEECCC-------------CCCEECCHHHHHHHHHHHHHHHCCCSCCTTCEEEEEESTT
T ss_pred CCCeEEEEeccccccchhhccccccccCCccccCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence 99999999999999999999999999999999999999999999998877778887776666 4443
No 2
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=100.00 E-value=4.1e-38 Score=271.57 Aligned_cols=207 Identities=43% Similarity=0.726 Sum_probs=172.9
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHH-HHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKIL-SESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~-~~a~~ 79 (228)
|||+||+|||||++||+||+++|++||+|++++|.+.+ .+.+.+ .++.+.++++...++..+++..+.++ +.+++
T Consensus 2 ~l~iVG~GpG~~~~LT~~A~~~L~~advv~~~~~~~~l-~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 77 (265)
T 2z6r_A 2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLM-AGTTLG---RIQRLIGKEIRVLSREDVELNFENIVLPLAKE 77 (265)
T ss_dssp CEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC-TTCCHH---HHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred EEEEEccCCCChHhcCHHHHHHHHhCCEEEEecccccc-ccCCHH---HHHhccCCcEEEcCcccHHHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999886433 001233 56555566665555566777778887 77777
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS 159 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~ 159 (228)
++||+|++|||++|+++.++++.+.++|++++|||||||++++|++|+||++++.++++++.+.|++|.+.++.+..++.
T Consensus 78 ~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~aaa~~g~pl~~~~~~~~v~~~s~~~~~~~~~~~l~~~~~ 157 (265)
T 2z6r_A 78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE 157 (265)
T ss_dssp SCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred CcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHHHHHHhCCCccCCCccEEEEEecCCcCCCchHHHHHHHHh
Confidence 89999999999999999999999999999999999999999667799999999999999999999998766788888888
Q ss_pred cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eecc
Q 027097 160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQ 226 (228)
Q Consensus 160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~ 226 (228)
.+.+|++++|++.++ +|||++.+..+.|.++.++...+++++++.+++ .+++
T Consensus 158 ~~~~tlvl~d~~~~~---------------~~y~~~~~~~~~l~~~~~~l~~~~~~~~~~v~v~~~l~ 210 (265)
T 2z6r_A 158 RGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAG 210 (265)
T ss_dssp TTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEESTT
T ss_pred CCCceEEEEeccccc---------------ccccCHHHHHHHHHHHHHHHhhcCCCCCCEEEEEEeCC
Confidence 888999999999654 789999999999988888877767776765554 5554
No 3
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=100.00 E-value=6.5e-35 Score=255.43 Aligned_cols=205 Identities=30% Similarity=0.372 Sum_probs=162.1
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
|||+||+| |||++||++|+++|++||+|+++.++.. -...+++.+..+. .+++...+++..++..+.+++.++.
T Consensus 9 ~l~lVG~G-Gd~~lLTl~A~~~L~~ADvV~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~g 83 (294)
T 1wde_A 9 TLLLVGWG-YAPGMQTLEALDAVRRADVVYVESYTMP----GSSWLYKSVVEAAGEARVVEASRRDLEERSREIVSRALD 83 (294)
T ss_dssp EEEEEECB-SSTTCCCHHHHHHHHHCSEEEEECSSST----TCHHHHHHHHHHHTSSSEEECCHHHHHTSHHHHTCCSSC
T ss_pred EEEEEECC-CChHHhhHHHHHHHHhCCEEEEeccccc----ccccchHHHHHhccCCeEEecChHHHHHHHHHHHHHhCC
Confidence 59999999 9999999999999999999999977510 0011111233333 2455555556666677778777666
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR 158 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~ 158 (228)
++||+|++|||++|+++.++++.+.++|++++|||||||++++ |++|+||+++++++++.|.+.|+.|.+.++.+.+++
T Consensus 84 ~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~v~~~~~~~~p~~~~~~l~~~l 163 (294)
T 1wde_A 84 AVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNL 163 (294)
T ss_dssp CEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCCCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHhCCCccCCCceEEEEeccCcccCCChHHHHHHHH
Confidence 8999999999999999999999999999999999999999975 689999999999999999888887766788888889
Q ss_pred hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHH----hCC-CCCCCCcEE-EEEecc
Q 027097 159 SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELL----QGE-SGKAHELKI-ILKQLQ 226 (228)
Q Consensus 159 ~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~----~~~-~~~~~~~~~-v~~~~~ 226 (228)
..+.+|+||++.... +|||++++++++|+++++. .++ |..++++.+ |+.+++
T Consensus 164 ~~~~~tlvl~~~~~~----------------~~~m~~~~i~~~L~~l~~~l~~~~~~~G~~~~~~~v~v~~~lg 221 (294)
T 1wde_A 164 CAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPSVLVEAGAG 221 (294)
T ss_dssp HHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCEEEEECCGG
T ss_pred hcCCCeEEEEecccc----------------cccccHHHHHHHHHHHHHhhhccccccCcCCCCCEEEEEEeCC
Confidence 888899999987632 6899999999999987665 344 344555544 445554
No 4
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=100.00 E-value=6.3e-34 Score=246.01 Aligned_cols=180 Identities=38% Similarity=0.686 Sum_probs=146.9
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES 80 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~ 80 (228)
+||+||+|||||++||+||+++|++||+|+++.+.+.+ .+ .. +.++.+++++....++..+++..+.+++.++++
T Consensus 14 ~l~vVG~GpGd~~lLTlrA~~~L~~ADvI~~~~~~~~l-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~ 88 (268)
T 1vhv_A 14 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-LS-SI---EEMEEFFGKRVVELERSDLEENSFRLIERAKSK 88 (268)
T ss_dssp EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC-SS-CH---HHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTS
T ss_pred EEEEEECCCCCHHHHHHHHHHHHhcCCEEEECCchHhh-hc-cH---HHHHHHhCCCccccchhHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999876544 11 12 255555565544433455666777888887779
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS 159 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~ 159 (228)
+||+|++|||++|+++.++++++++.|++++|||||||++++ |++|+||++|+..+++.+ +.|.++++.+.+++.
T Consensus 89 ~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiSs~~aa~a~~G~pl~~~~~~~sv~~----~~~~~~~~~~~~~l~ 164 (268)
T 1vhv_A 89 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSW----HRSQTPVNVIKANRS 164 (268)
T ss_dssp EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECS----SCCSHHHHHHHHHHH
T ss_pred CEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCccHHHHHHHHcCCCcccCcceEEEEe----cCCCchHHHHHHHhc
Confidence 999999999999999999999999999999999999999975 689999999998888865 334445677777888
Q ss_pred cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHH
Q 027097 160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVEL 207 (228)
Q Consensus 160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~ 207 (228)
...+|++++|.+ +.+|++.++.+.|+++.+
T Consensus 165 ~~~~tlvl~d~~------------------~~~~~~~~~~~~L~~l~~ 194 (268)
T 1vhv_A 165 IDAHTLLFLDLH------------------PEPMTIGHAVENLIAEDA 194 (268)
T ss_dssp TTCBEEEEECCS------------------SSCCCHHHHHHHHHHHCG
T ss_pred cCCCeEEEEcCc------------------hhhcCHHHHHHHHHHHHh
Confidence 888999999985 237999999999988654
No 5
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=99.97 E-value=4.1e-30 Score=225.02 Aligned_cols=161 Identities=17% Similarity=0.178 Sum_probs=122.8
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHH
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKI 73 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i 73 (228)
|||+||+|||||++||+||+++|++||+|+++.+.+ .+ .++.+. +.+.... ....++++.+.+
T Consensus 26 ~l~lVG~GpGdp~lLTlrA~~~L~~ADvV~~d~~~~-------~~---il~~~~~~~~~i~~~k~~~~~~~~~~~i~~~l 95 (294)
T 2ybo_A 26 SVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVA-------RE---LIALLPESCQRIYVGKRCGHHSLPQEEINELL 95 (294)
T ss_dssp CEEEEEEESSCGGGSCHHHHHHHTTCSEEEECTTSC-------HH---HHHHSCTTSEEEECC--------CHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCEEEEcCCCC-------HH---HHHhcccCCeEEecccccccccCCHHHHHHHH
Confidence 699999999999999999999999999999965422 33 333221 1222111 122366777788
Q ss_pred HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097 74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY 151 (228)
Q Consensus 74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~ 151 (228)
++.+++ ++|++|++|||++|+++.++++.+.+.|++++|||||||++++ |++|+||++++.+.++.+.+.|.++.+..
T Consensus 96 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt~~~~~~~~~~~sg~~~~~~~~ 175 (294)
T 2ybo_A 96 VRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTGHLQNDGRL 175 (294)
T ss_dssp HHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSCBTTTBSCEEEEECSCCTTSSC
T ss_pred HHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcccCCCCcEEEEEcccCCcccch
Confidence 888876 8999999999999999999999999999999999999999975 68999999998777777777777643211
Q ss_pred HHHHHHhhcCCCeEEEEecc
Q 027097 152 EKIKRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 152 ~~i~~~~~~g~~tlvlld~~ 171 (228)
+..++.+..+.+|+||++..
T Consensus 176 ~~~~~~l~~~~~tlVl~~~~ 195 (294)
T 2ybo_A 176 DLDWAGLARGKQTLVFYMGL 195 (294)
T ss_dssp CCCHHHHTSSSCEEEEESCG
T ss_pred hhHHHHHhcCCCeEEEECcH
Confidence 12245666778999998865
No 6
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=99.97 E-value=5.5e-30 Score=222.71 Aligned_cols=162 Identities=15% Similarity=0.184 Sum_probs=121.9
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCCeeecC------hhhHHHHHHHH
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIALAD------REMVEEKADKI 73 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~i~~~~------~~~~e~~~~~i 73 (228)
|||+||+|||||++||+||+++|++||+|+++.+.+ .+ .++.+ .++++.... ...++++.+.+
T Consensus 16 ~l~lVG~GpGd~~lLTl~A~~~L~~ADvV~~d~~~~-------~~---ll~~~~~~~~~~~~~k~~~~~~~~~~~i~~~l 85 (280)
T 1s4d_A 16 SVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVN-------ED---CLKLARPGAVLEFAGKRGGKPSPKQRDISLRL 85 (280)
T ss_dssp CEEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSC-------TT---GGGGSSTTCCEEECSCCC--CCCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCC-------HH---HHHhccCCCEEEeccccccccccCHHHHHHHH
Confidence 699999999999999999999999999999975432 23 23222 123333211 23467777888
Q ss_pred HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh-
Q 027097 74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF- 150 (228)
Q Consensus 74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~- 150 (228)
++.+++ ++|++|+.|||++|+++.++++.+.+.|++++|||||||++++ +++|+||++++.+.++.+.+.|.++...
T Consensus 86 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~~~~~~~~~~~~~~~ 165 (280)
T 1s4d_A 86 VELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVP 165 (280)
T ss_dssp HHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC------
T ss_pred HHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCccCCCcccEEEEECCcCCccccc
Confidence 888876 8999999999999999999999999999999999999999975 6899999988876666667777764210
Q ss_pred HHHHHHHhhcCCCeEEEEeccc
Q 027097 151 YEKIKRNRSLGLHTLCLLDIRV 172 (228)
Q Consensus 151 ~~~i~~~~~~g~~tlvlld~~~ 172 (228)
....++.+..+.+|+||++...
T Consensus 166 ~~~~~~~l~~~~~tlVl~~~~~ 187 (280)
T 1s4d_A 166 DRINWQGIASGSPVIVMYMAMK 187 (280)
T ss_dssp -CCCHHHHHTTCSEEEEESCST
T ss_pred ccccHHHHhCCCCeEEEECchh
Confidence 0012344556779999998764
No 7
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=99.97 E-value=5.5e-30 Score=221.08 Aligned_cols=161 Identities=19% Similarity=0.166 Sum_probs=122.1
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
|||+||+|||||++||+||+++|++||+|++++.. ++.+ .++.+. +++++......++++.+.+++.+++
T Consensus 5 ~l~iVG~GpG~~~lLT~~A~~~L~~AdvV~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 75 (264)
T 3ndc_A 5 TVHFIGAGPGAADLITIRGRDLIASCPVCLYAGSL------VPEA---LLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAA 75 (264)
T ss_dssp CEEEEECBSSCGGGSBHHHHHHHHHCSEEEECSTT------SCGG---GGGGSCTTCEEEECTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCChHHHHHHHHHHHHcCCEEEEECCC------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence 69999999999999999999999999999985431 1223 333332 3444433334467788888888765
Q ss_pred -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCC--ChHHHHH
Q 027097 80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG--SFYEKIK 155 (228)
Q Consensus 80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~--~~~~~i~ 155 (228)
++||+|++|||++|+++.++++.+.+.|++++|+|||||++++ |++|+||++.+.+.++.+.+.|.+.. ...+.+
T Consensus 76 G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaaA~lG~plt~~~~~~~~~~~s~~~~~~~~~~~~~l- 154 (264)
T 3ndc_A 76 GQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGRASAMPAGETL- 154 (264)
T ss_dssp TCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHTCCSCBTTTBCCEEEEECCTTTCCCCTTCCH-
T ss_pred CCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHHHHhCCCccCCCceeEEEEEeccCCCCCcchHHHH-
Confidence 8999999999999999999999999999999999999999975 67999999888777777777676531 111223
Q ss_pred HHhhcCCCeEEEEecc
Q 027097 156 RNRSLGLHTLCLLDIR 171 (228)
Q Consensus 156 ~~~~~g~~tlvlld~~ 171 (228)
+.+.....|+++++..
T Consensus 155 ~~l~~~~~tlvl~~~~ 170 (264)
T 3ndc_A 155 ENFARTGAVLAIHLSV 170 (264)
T ss_dssp HHHHTTTCEEEEESCG
T ss_pred HHHhcCCCcEEEecCH
Confidence 3444455788887753
No 8
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=99.97 E-value=1.1e-29 Score=221.12 Aligned_cols=161 Identities=24% Similarity=0.271 Sum_probs=124.7
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
|||+||+|||||++||++|+++|++||+|++++.. .+.+ .++.+. ++++.......+++..+.+++.+++
T Consensus 22 ~l~lVG~GpGd~~~LT~~A~~~L~~AdvV~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 92 (285)
T 1cbf_A 22 KLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSL------VSQD---LIAKSKPGAEVLKTAGMHLEEMVGTMLDRMRE 92 (285)
T ss_dssp EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCHH---HHTTSCTTCEEEECTTCCHHHHHHHHHHHHTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHHhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence 59999999999999999999999999999986531 1122 333222 3444433334567788888888876
Q ss_pred -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCC-CCChHHHHHH
Q 027097 80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR-PGSFYEKIKR 156 (228)
Q Consensus 80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~-p~~~~~~i~~ 156 (228)
++||+|++|||++|+++.++++.+.+.|++++|||||||++++ |++|+||+.++.+.++.+.+.|++ |....+. +.
T Consensus 93 g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~pl~~~~~~~~~~~~~~~g~~~~~~~~~-l~ 171 (285)
T 1cbf_A 93 GKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEK-LT 171 (285)
T ss_dssp TCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSSSCCCGGGC-HH
T ss_pred CCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHHHHcCCCcccCCcceeEEEeccCCCCCcchHHH-HH
Confidence 8999999999999999999999999999999999999999975 679999998887777777666665 2222222 34
Q ss_pred HhhcCCCeEEEEecc
Q 027097 157 NRSLGLHTLCLLDIR 171 (228)
Q Consensus 157 ~~~~g~~tlvlld~~ 171 (228)
++..+.+|+++++..
T Consensus 172 ~l~~~~~tlvl~~~~ 186 (285)
T 1cbf_A 172 DLAKHKCTIALFLSS 186 (285)
T ss_dssp HHHTTCSEEEEESCT
T ss_pred HHhcCCCeEEEECcH
Confidence 566677899998754
No 9
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=99.97 E-value=1.4e-29 Score=217.11 Aligned_cols=162 Identities=17% Similarity=0.106 Sum_probs=119.9
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
+||+||+||||+++||+||+++|++||+|+++++. ...+ .++.+. ++++.......++++.+.+.+.+++
T Consensus 6 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~------~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 76 (253)
T 4e16_A 6 KVHFVGAGPGDKELITLKGYKLLSNADVVIYAGSL------VNPE---LLEYCKEDCQIHNSAHMDLQEIIDVMREGIEN 76 (253)
T ss_dssp CEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCGG---GGGGSCTTCEEEEGGGCCHHHHHHHHHHHHHT
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence 59999999999999999999999999999996531 1122 232221 2333332233467778888888766
Q ss_pred -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHH
Q 027097 80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRN 157 (228)
Q Consensus 80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~ 157 (228)
++|++|++|||++|+++.++++.+.+.|+++++||||||++++ |++|+||++.+.+.++.+.+.|+++.......++.
T Consensus 77 g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~~~~~~~~~g~~~~~~~~~~~~ 156 (253)
T 4e16_A 77 NKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRMEGRTPVPEKESIQS 156 (253)
T ss_dssp TCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHHHHHTCCSCBTTTBSCEEEEEC---CCCCGGGSHHH
T ss_pred CCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHhCCCcccCCccceEEEEeccCCCCcchHHHHHH
Confidence 8999999999999999999999999999999999999999975 67999998877666666666666532111122345
Q ss_pred hhcCCCeEEEEecc
Q 027097 158 RSLGLHTLCLLDIR 171 (228)
Q Consensus 158 ~~~g~~tlvlld~~ 171 (228)
+.....|+++++..
T Consensus 157 l~~~~~t~vl~~~~ 170 (253)
T 4e16_A 157 YAKHQTSMVIFLSV 170 (253)
T ss_dssp HHTTCSEEEEEECS
T ss_pred HhcCCCeEEEECcH
Confidence 66677899998753
No 10
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=99.97 E-value=8.5e-30 Score=215.85 Aligned_cols=151 Identities=21% Similarity=0.253 Sum_probs=117.2
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecC------hhhHHHHHHHHH
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALAD------REMVEEKADKIL 74 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~------~~~~e~~~~~i~ 74 (228)
|||+||+|||||++||+||+++|++||+|+++.+.+ .+ .++.+ ++++.... ...+++..+.++
T Consensus 4 ~l~vVG~GpG~~~~LT~~A~~~L~~advv~~~~~~~-------~~---~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 72 (235)
T 1ve2_A 4 KVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVH-------PG---VLALA-KGELVPVGKEGYGGKTPQEAITARLI 72 (235)
T ss_dssp EEEEEECBSSSGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTC-CSEEEEC-------CCCHHHHHHHHH
T ss_pred EEEEEeeCCCCHHHHHHHHHHHHHhCCEEEEeCCCC-------HH---HHHhh-CcEEEEecccCcccccCHHHHHHHHH
Confidence 499999999999999999999999999999865432 23 33322 33333211 123567777788
Q ss_pred HHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHH
Q 027097 75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE 152 (228)
Q Consensus 75 ~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~ 152 (228)
+.+++ ++|++|++|||++|+++.++++.+.+.|+++++||||||++++ |++|+||++++.+.++.+.+.|. |..
T Consensus 73 ~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~~s~~~-~~~--- 148 (235)
T 1ve2_A 73 ALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD-PAL--- 148 (235)
T ss_dssp HHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC-TTS---
T ss_pred HHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHcCCCcccCCcccEEEEeCCCC-chh---
Confidence 88876 8999999999999999999999998889999999999999975 68999999988666666667776 532
Q ss_pred HHHHHhhcCCCeEEEEecc
Q 027097 153 KIKRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 153 ~i~~~~~~g~~tlvlld~~ 171 (228)
++. +.+|+++++..
T Consensus 149 ----~l~-~~~t~vl~~~~ 162 (235)
T 1ve2_A 149 ----PLP-RADTLVLLMPL 162 (235)
T ss_dssp ----CCC-BCSEEEEEC--
T ss_pred ----hhc-cCCeEEEEcCh
Confidence 445 66899998754
No 11
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=99.97 E-value=7.8e-30 Score=216.57 Aligned_cols=154 Identities=21% Similarity=0.196 Sum_probs=117.7
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecC-----hhhHHHHHHHHHH
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALAD-----REMVEEKADKILS 75 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~-----~~~~e~~~~~i~~ 75 (228)
|||+||+|||||++||+||+++|++||+|+++.+.+ .+ .++.+. ++....+ ...+++..+.+.+
T Consensus 2 ~l~iVG~GpG~~~~LT~~A~~~L~~advI~~~~~~~-------~~---~l~~~~-~~~i~~~~~~~~~~~~~~~~~~i~~ 70 (239)
T 1va0_A 2 RVYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLVD-------ER---VLALAP-GEKVYVGKEEGESEKQEEIHRLLLR 70 (239)
T ss_dssp EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTCC-SEEEECCCCC----CHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCC-------HH---HHhhcc-ccEEecccccccccCHHHHHHHHHH
Confidence 699999999999999999999999999999965422 33 232211 2222111 2346777788888
Q ss_pred HcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHH
Q 027097 76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKI 154 (228)
Q Consensus 76 ~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i 154 (228)
.+++ ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |+||++++.+..+.+.+.|.++.. ...
T Consensus 71 ~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa---g~pl~~~~~~~~~~~~~~~~~~~~--~~~ 145 (239)
T 1va0_A 71 HARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS---GLPLTHRGLAHGFAAVSGVLEGGG--YPD 145 (239)
T ss_dssp HHHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTT---CCCSSBTTTBSEEEEEESSCGGGC--CCC
T ss_pred HHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECCcchHhhc---CCCcccCCccceEEEEeccCCccc--hhh
Confidence 8876 8999999999999999999999999999999999999999987 999999886556666666665321 112
Q ss_pred HHHhhcCCCeEEEEecc
Q 027097 155 KRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 155 ~~~~~~g~~tlvlld~~ 171 (228)
++++..+ +|+++++..
T Consensus 146 ~~~l~~~-~t~vl~~~~ 161 (239)
T 1va0_A 146 LRPFARV-PTLVVLMGV 161 (239)
T ss_dssp CTTTTTC-SSEEEESCS
T ss_pred HHHhcCC-CcEEEEccH
Confidence 3556667 999998865
No 12
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.96 E-value=3.1e-28 Score=205.35 Aligned_cols=158 Identities=21% Similarity=0.268 Sum_probs=116.8
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-----CCCeee-----c-C----hhh
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-----GKPIAL-----A-D----REM 65 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-----~~~i~~-----~-~----~~~ 65 (228)
|||+||+|||||++||+||+++|++||+|+++.+...- ..-+.+.++.+. ++++.. . + ...
T Consensus 4 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~~----~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (232)
T 2qbu_A 4 KLIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSER----ESIALSIVEDILTERRDGCRILDPVFPMTDDRDELESH 79 (232)
T ss_dssp CEEEEECBSSCGGGSBHHHHHHHHHCSEEECCBCTTCS----SCHHHHHHHHHHHHCSSCCEEECCBCCSCSSSTTHHHH
T ss_pred eEEEEEcCCCChHHHHHHHHHHHHhCCEEEEeCCCCCc----cchHHHHHHHHhccccCCcEEEEecCCCCccHHHHHHH
Confidence 59999999999999999999999999999987653100 000222443332 333321 1 1 124
Q ss_pred HHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccC
Q 027097 66 VEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE 143 (228)
Q Consensus 66 ~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~ 143 (228)
+++..+.+.+.+++ ++||+|++|||++|+++.++++.+.++|++++++|||||++++ |++|+|++.++..+++..
T Consensus 80 ~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~--- 156 (232)
T 2qbu_A 80 WDSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAATAGRTLVEGDEILLVVP--- 156 (232)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCCBCTTCCEEEES---
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHHHhCCCCCCCCceEEEEe---
Confidence 67777888888876 8999999999999999999999999999999999999999975 689999988776666542
Q ss_pred CCCCCChHHHHHHHhhcCCCeEEEEecc
Q 027097 144 TWRPGSFYEKIKRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 144 ~~~p~~~~~~i~~~~~~g~~tlvlld~~ 171 (228)
.++. .+...+..+ +|++|++..
T Consensus 157 -~~~~----~l~~~~~~~-~t~vl~~~~ 178 (232)
T 2qbu_A 157 -RVDD----RFERVLRDV-DACVIMKTS 178 (232)
T ss_dssp -SCCH----HHHHHGGGC-SEEEESSHH
T ss_pred -CCHH----HHHHHhhcC-CeEEEEccc
Confidence 2221 344445444 799998654
No 13
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=99.96 E-value=1.1e-28 Score=212.00 Aligned_cols=160 Identities=18% Similarity=0.216 Sum_probs=116.6
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh------CCCee----ecCh------h
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY------GKPIA----LADR------E 64 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~------~~~i~----~~~~------~ 64 (228)
|||+||+|||||++||+||+++|++||+|+++.+...- .++++.++.+. ++++. ...+ .
T Consensus 6 ~l~iVG~GpG~~~~LT~~A~~~L~~advV~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
T 2e0n_A 6 SIISVSLGPGDPGLITVKALSQLREADVIYYPGTVSAS-----GAVTSVALDILKEFDLDPSKLRGMLVPMSRSRGAAEA 80 (259)
T ss_dssp EEEEEECBSSCGGGSBHHHHHHHHHCSEEEEEEEECTT-----CCEECHHHHHHTTTTCCGGGEEEEEEECC--------
T ss_pred EEEEEEeCCCChHHHHHHHHHHHHhCCEEEEecccccc-----ccHHHHHHHHHHhcCCCCCEEEeeccCCccchhhhHH
Confidence 39999999999999999999999999999998543110 00112343322 22332 1111 1
Q ss_pred hHHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEeccc
Q 027097 65 MVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFT 142 (228)
Q Consensus 65 ~~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~ 142 (228)
.+++..+.|++.+++ ++||+|++|||++|+++.++++.+.+.|++++|||||||++++ |++|+||++++..+++..
T Consensus 81 ~~~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~G~pl~~~~~~~~~~~-- 158 (259)
T 2e0n_A 81 SYAANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVLA-- 158 (259)
T ss_dssp -CGGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHHHTTCCSBCTTCCEEEEC--
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHHhcCCCCcCCCceEEEEc--
Confidence 145667788888776 8999999999999999999999999999999999999999965 689999998777777543
Q ss_pred CCCCCCChHHHHHHHhhcCCCeEEEEeccc
Q 027097 143 ETWRPGSFYEKIKRNRSLGLHTLCLLDIRV 172 (228)
Q Consensus 143 ~~~~p~~~~~~i~~~~~~g~~tlvlld~~~ 172 (228)
.+. + .+.+.+.+.. .+|+++++...
T Consensus 159 ~~~-~---~~~l~~~~~~-~~t~vl~~~~~ 183 (259)
T 2e0n_A 159 QID-E---IGELERALVT-HSTVVVMKLST 183 (259)
T ss_dssp SCS-S---THHHHHHHTT-CSEEEECCTTS
T ss_pred CCC-C---HHHHHHHhhc-CCEEEEEcccc
Confidence 222 1 3455555554 47999987653
No 14
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=99.96 E-value=4.2e-28 Score=206.71 Aligned_cols=123 Identities=18% Similarity=0.214 Sum_probs=90.5
Q ss_pred CEEEEecCCCCcc---hhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCC-----eeecChhhHHHHHH
Q 027097 1 MLYIIGLGLGDER---DITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKP-----IALADREMVEEKAD 71 (228)
Q Consensus 1 ml~iVG~GpG~~~---~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~-----i~~~~~~~~e~~~~ 71 (228)
|||+||+|||||+ +||+||+++|++||+|+++++.. +.+ .++.+ .+++ +....+..+++..+
T Consensus 4 ~ly~VG~GpGd~~~~dLlTlrA~~~L~~aDvI~~~~~~~------~~~---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (242)
T 1wyz_A 4 ALYLLPVTLGDTPLEQVLPSYNTEIIRGIRHFIVEDVRS------ARR---FLKKVDREIDIDSLTFYPLNKHTSPEDIS 74 (242)
T ss_dssp SEEEECCCSSSSCHHHHSCTHHHHHHTTCCEEEESCHHH------HHH---HHHHHCSSSCTTCCCCEECCSSCCHHHHH
T ss_pred eEEEEecCCCCCcccCccCHHHHHHHHhCCEEEEeCCcc------hHH---HHHhcCCCCceeeeeeecccccCHHHHHH
Confidence 5999999999998 69999999999999999876421 122 34333 1222 22223334456667
Q ss_pred HHHHHcCC-CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccC
Q 027097 72 KILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRF 132 (228)
Q Consensus 72 ~i~~~a~~-~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~ 132 (228)
.+++.+++ ++||+|+ +|||++|+++.++++.+++.|++++|||||||++++ |++|+|+++|
T Consensus 75 ~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiSs~~aa~a~~G~p~~~f 138 (242)
T 1wyz_A 75 GYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSF 138 (242)
T ss_dssp HHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSE
T ss_pred HHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHHHHHHHHHHcCCCCCeE
Confidence 88888877 8999997 899999999999999999999999999999999975 6799997754
No 15
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=99.95 E-value=3.2e-28 Score=224.71 Aligned_cols=159 Identities=22% Similarity=0.244 Sum_probs=120.6
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHH
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKI 73 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i 73 (228)
|||+||+|||||++||++|+++|++||+|+++.+.+ .+ .++.+. +.+.... ....++++.+.+
T Consensus 217 ~l~lVG~GpGd~~lLTlrA~~~L~~ADvV~~d~~~~-------~~---il~~~~~~~~~~~~~k~~~~~~~~~~~i~~~l 286 (457)
T 1pjq_A 217 EVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVS-------DD---IMNLVRRDADRVFVGKRAGYHCVPQEEINQIL 286 (457)
T ss_dssp EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTSCTTSEEEECSCC---CCCTTHHHHHHH
T ss_pred EEEEEeCCCCChHHccHHHHHHHHhCCEEEEeCCCC-------HH---HHhhcccCCEEEeccccccccCCCHHHHHHHH
Confidence 589999999999999999999999999999975432 23 232211 1222211 112356777788
Q ss_pred HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097 74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY 151 (228)
Q Consensus 74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~ 151 (228)
++.+++ ++|++|++|||++|+++.++++.+.+.|++++|+|||||++++ |++|+||++++.+.++.+.+.|+++..
T Consensus 287 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~v~vvPGiSs~~aa~a~~Giplt~~~~~~~~~~vsg~~~~~~-- 364 (457)
T 1pjq_A 287 LREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGG-- 364 (457)
T ss_dssp HHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--------
T ss_pred HHHHHCCCcEEEEeCCCCCccCCHHHHHHHHHHCCCCEEEeCCHhHHHHHHHHcCCCccCCCccceEEEEeCCCCCcc--
Confidence 888876 8999999999999999999999999999999999999999975 679999999998788888888876421
Q ss_pred HHHHHHhhcCCCeEEEEecc
Q 027097 152 EKIKRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 152 ~~i~~~~~~g~~tlvlld~~ 171 (228)
...++++..+.+|+||++..
T Consensus 365 ~~~~~~l~~~~~t~Vl~~~~ 384 (457)
T 1pjq_A 365 ELDWENLAAEKQTLVFYMGL 384 (457)
T ss_dssp CCCHHHHHSSSEEEEESSCS
T ss_pred hhhHHHHhcCCCeEEEEcch
Confidence 11245666778999998765
No 16
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=99.95 E-value=1.3e-27 Score=209.29 Aligned_cols=154 Identities=15% Similarity=0.156 Sum_probs=115.7
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
|||+||+||||+++||+||+++|++||+|+++++.. ..+ .++.+. ++++........++..+.+++.+++
T Consensus 17 ~LylVG~GpG~~~~lT~rA~~~L~~aDvI~~edtr~------~~~---lL~~~~~~~~~i~~~~~~~~~~~~~li~~l~~ 87 (296)
T 3kwp_A 17 HLYLVPTPIGNLDDMTFRAVKTLTAVDLIAAEDTRN------TQK---LLNHFEITTKQISFHEHNTQERIPQLIAKLKQ 87 (296)
T ss_dssp EEEECCBCSSCGGGCCHHHHHHHHHSSEEEESCHHH------HHH---HHHHTTCCCEEEECSTTTHHHHHHHHHHHHHT
T ss_pred eEEEeccCCCCccchhhHHHHHHhHhhhhhhhcccc------HHH---HhhheeeeeeeeehhhcchhhHhHHHHHHHhc
Confidence 499999999999999999999999999999976311 112 344332 3444433334456677788888876
Q ss_pred -CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh--HHHH
Q 027097 80 -SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF--YEKI 154 (228)
Q Consensus 80 -~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~--~~~i 154 (228)
++||+++ +|||++|+++.++++.+.+.|++|+++||+||++++ +++|+|+.+| .+ ...+ |... ....
T Consensus 88 G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~~~f----~f--~g~~--p~~~~~r~~~ 159 (296)
T 3kwp_A 88 GMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQPF----YF--YGFL--DRKPKDRKAE 159 (296)
T ss_dssp TCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCCSSE----EE--EEEC--CSSHHHHHHH
T ss_pred CceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCCCce----eE--Eeec--cCCcHHHHHH
Confidence 8999998 999999999999999999999999999999999864 7899999754 22 2222 2221 2234
Q ss_pred HHHhhcCCCeEEEEecc
Q 027097 155 KRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 155 ~~~~~~g~~tlvlld~~ 171 (228)
++.+....+|+||++..
T Consensus 160 l~~l~~~~~tlV~y~~~ 176 (296)
T 3kwp_A 160 IAGLAQRPETLIFYEAP 176 (296)
T ss_dssp HHTTTTCCSEEEEEECG
T ss_pred HHHhhcCCceeEeeeCc
Confidence 56677777899997765
No 17
>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A*
Probab=99.95 E-value=2.5e-27 Score=207.49 Aligned_cols=171 Identities=22% Similarity=0.284 Sum_probs=120.9
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH--h-CCCeeecChhhHHHHHHHHHHHc
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL--Y-GKPIALADREMVEEKADKILSES 77 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~--~-~~~i~~~~~~~~e~~~~~i~~~a 77 (228)
|||+||+|||||++||++|+++|++||+|++ +.. .++.+..+ + ++++.........+..+.+++.+
T Consensus 3 ~l~lVG~GpGdp~lLT~rA~~~L~~ADvVig--~~~---------~l~ll~~~~~~~~k~~~~~~~~~e~~~~~~~l~~a 71 (295)
T 2zvb_A 3 ELFLVGMGPGDLPGLTQRAREALEGAEVVIG--YST---------YVKLLEEMGLLAGKEVVRKGMTEELDRAEEALERA 71 (295)
T ss_dssp EEEEEECBTSSGGGSCHHHHHHHHHCSEEEC--CHH---------HHHHHHHHTCCTTSEEECTTCCSHHHHHHHHHHHH
T ss_pred EEEEEECCCCChHHHHHHHHHHHHcCCEEEE--eCc---------HHHHHHHhhccCCCEEEecCCchHHHHHHHHHHHH
Confidence 5999999999999999999999999999993 321 12245444 2 45543322112224456677776
Q ss_pred CC-CcEEEEecCCCCCcccHHHHHHHHHhCC--------------------CcEEEECCCCHHhHH-HHhCCccccCCce
Q 027097 78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLG--------------------IQVKAVHNASVMNAV-GICGLQLYRFGET 135 (228)
Q Consensus 78 ~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~g--------------------i~v~viPGiSs~~a~-a~~Gl~l~~~~~~ 135 (228)
++ ++||+|++|||++|+++..+.+.+++.+ ++++|||||||++++ |++|+||++.
T Consensus 72 ~~G~~Va~L~~GDP~~yg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~gi~veVIPGiSS~~aaaA~lG~plt~~--- 148 (295)
T 2zvb_A 72 LSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHD--- 148 (295)
T ss_dssp HTTCEEEEEESBCTTSSSSHHHHHHHHHHTTCEECSCCCSSSEEEEETTEEEEEEEECCCCHHHHHHHTTEETTSSC---
T ss_pred HCCCcEEEEeCCCCChhhhHHHHHHHHHHhcccccccccccccccccccCCCcEEEECCHhHHHHHHHHhCCCccCC---
Confidence 66 8999999999999999999988887654 999999999999975 6799999642
Q ss_pred eEEecccCCCCCCChHHHHHHHh---hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHH
Q 027097 136 VSIPFFTETWRPGSFYEKIKRNR---SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLE 204 (228)
Q Consensus 136 ~~v~~~~~~~~p~~~~~~i~~~~---~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~ 204 (228)
+.+ .+.|.+. .+++.+.+.+ ..+.+|++|++.... .|++++.++++.|++
T Consensus 149 ~~~--is~~~~~-~~~~~l~~~l~~~~~~~~t~vl~~~~~~----------------~r~~~~~~i~~~L~~ 201 (295)
T 2zvb_A 149 TCL--ISLSDLL-TPWPLIERRLHAAGQGDFVVVLYNPQSK----------------RRDWQLRKSAEILLE 201 (295)
T ss_dssp EEE--EECCCTT-SCHHHHHHHHHHHHHTTCEEEEESCCCS----------------SCTTHHHHHHHHHTT
T ss_pred CeE--EeCCCCC-CCHHHHHHHHHHhhcCCcEEEEEcCCcc----------------cchhhHHHHHHHHHh
Confidence 122 2344331 2355554433 446789999987532 355677777777765
No 18
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=99.95 E-value=1.7e-27 Score=203.89 Aligned_cols=152 Identities=16% Similarity=0.163 Sum_probs=106.7
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeec-ChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA-DREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~-~~~~~e~~~~~i~~~a~~ 79 (228)
++|+||+|||||++||+||+++|++||+|++.+. .+ +.+....++++... +.+..+ ..+.+++.+++
T Consensus 10 ~~~~vG~GPGd~~lLT~rA~~~L~~AdvI~g~d~--~~---------~~~~~~~~~~~~~~~~~~ei~-~~~~li~~~~~ 77 (251)
T 3nut_A 10 WVTVAGLGPGREDLVTPEVTAALAEATDIVGYIP--YV---------ARIAPREGLTLHPTDNRVELD-RATHALEMAAE 77 (251)
T ss_dssp EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECGG--GG---------TTCCCCTTCEEEECCSSCCHH-HHHHHHHHHHT
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHhCCEEEEcCc--cc---------ccccccCCCEEeecCCHHHHH-HHHHHHHHHHC
Confidence 4799999999999999999999999999995432 11 01111123444322 122222 23467777765
Q ss_pred -CcEEEEecCCCCCcccHHHHHHHHHh----CCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHH
Q 027097 80 -SNVAFLVVGDPFGATTHTDLVVRAKK----LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK 153 (228)
Q Consensus 80 -~~Va~l~~GDP~~~~~~~~l~~~~~~----~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~ 153 (228)
++||+|++|||++|+++.++++.+.+ .|++++|||||||++++ |++|+||++.... .+.|.+. .+++.
T Consensus 78 G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~-----~s~~~~~-~~~~~ 151 (251)
T 3nut_A 78 GRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCA-----INLSDNL-KPFEI 151 (251)
T ss_dssp TCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEECCCCHHHHHHHHHEETTSSSEEE-----EESCCTT-SCHHH
T ss_pred CCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEECCHHHHHHHHHHhCCCccCCeEE-----EEecCCC-CChHH
Confidence 89999999999999999999999987 89999999999999975 6799999643222 2233322 12555
Q ss_pred HHHHh---hcCCCeEEEEec
Q 027097 154 IKRNR---SLGLHTLCLLDI 170 (228)
Q Consensus 154 i~~~~---~~g~~tlvlld~ 170 (228)
+.+.+ .....|+++++.
T Consensus 152 ~~~~l~~l~~~~~tlvl~~~ 171 (251)
T 3nut_A 152 LEKRLRHAARGDFAMAFYNP 171 (251)
T ss_dssp HHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHhCCCCEEEEECC
Confidence 54433 456678888764
No 19
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}
Probab=99.94 E-value=3e-26 Score=196.00 Aligned_cols=133 Identities=21% Similarity=0.378 Sum_probs=98.4
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcch-----hhHHhhHh-CCCeeecC---h--------
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDG-----LSTLEKLY-GKPIALAD---R-------- 63 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~-----~~~l~~~~-~~~i~~~~---~-------- 63 (228)
|||+||+|||||++||+||+++|++||+|++++... ..+. .+.++.+. ++++.... +
T Consensus 4 ~l~vVG~GpGd~~lLTl~A~~~L~~Advv~~~~~~~------~~~~l~~~~~~il~~~~~~~~~~~~~~p~~~~~~~~~~ 77 (251)
T 2npn_A 4 TIYVIGIGTGSPEFLTLQAISGLRHAQAIVALDKGE------QKSDLLALRQKIVDTHAPGTPIYAVTDPERDRNPDNYE 77 (251)
T ss_dssp EEEEEECBSSCGGGCCHHHHHHHHHCSEEEEEC---------CCHHHHHHHHHHHHHHSTTCCEEEECC----------C
T ss_pred EEEEEEeCCCChhHhhHHHHHHHHhCCEEEEeCCCC------CchhhhhhHHHHHHHHhCCCEEEEecCCCcccchhhhh
Confidence 499999999999999999999999999999875321 0111 11344432 34433211 1
Q ss_pred -------hhHHHHH-HHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCC---CcEEEECCCCHHhHH-HHhCCccc
Q 027097 64 -------EMVEEKA-DKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLG---IQVKAVHNASVMNAV-GICGLQLY 130 (228)
Q Consensus 64 -------~~~e~~~-~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~g---i~v~viPGiSs~~a~-a~~Gl~l~ 130 (228)
...++.. +.+.+.+++ ++||+|++|||++|+++.++++.+.+.| ++++|||||||++++ |++|+||+
T Consensus 78 ~~~~~~~~~~~~~~~~~i~~~~~~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~g~~~i~veviPGiSs~~aa~a~~g~pl~ 157 (251)
T 2npn_A 78 EEVRRWHAERAHLLASTIRERTPDDGAVAFLVWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILIN 157 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEESBCTTSSCCHHHHHHHHHHHHTCCEEEEEECCCCHHHHHHHHHTCCSS
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhcCCCCCcEEEeCChhHHHHHHHHcCCCcC
Confidence 1122223 356677665 8999999999999999999999998876 999999999999975 67999999
Q ss_pred cCCceeEEe
Q 027097 131 RFGETVSIP 139 (228)
Q Consensus 131 ~~~~~~~v~ 139 (228)
++.+++.+.
T Consensus 158 ~~~~~~~~~ 166 (251)
T 2npn_A 158 RIGEAIHIT 166 (251)
T ss_dssp CTTCCCEEE
T ss_pred CCCCeEEEE
Confidence 877666665
No 20
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}
Probab=99.92 E-value=1.4e-24 Score=188.31 Aligned_cols=138 Identities=22% Similarity=0.256 Sum_probs=99.7
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-C--CCeeecC---h-----------h
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-G--KPIALAD---R-----------E 64 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~--~~i~~~~---~-----------~ 64 (228)
||+||+|||||++||+||+++|++||+|++++....- ......+.+.++.+. . ++++... + .
T Consensus 24 ly~VG~GPGdpellTlrA~~~L~~aDvI~~~~t~~~~-~~l~~~a~~il~~~~~~~~~~~i~~~~pm~~~~~~~Y~~~~~ 102 (275)
T 3nd1_A 24 LSLIGIGTGNPRHITGQAVDAMNAADLILIPLKGADK-SDLAGLRRQICAAHLTNPATKVIDFALPVRDASNPSYRKGVD 102 (275)
T ss_dssp EEEEECBSSCGGGCBHHHHHHHHHCSEEEEECCCSCG-GGCHHHHHHHHHHHCCCTTCEEEEECCCCC---------CHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHhCCEEEecCCcccc-hhhhhhHHHHHHHhhcccCcEEEEecCCccccccchhhhhhh
Confidence 9999999999999999999999999999998752100 000000122555543 2 3333211 0 0
Q ss_pred hH-----HHHHHHHHHHcCC--CcEEEEecCCCCCcccHHHHHHHHHh-CCCcEEEECCCCHHhHH-HHhCCccccCCce
Q 027097 65 MV-----EEKADKILSESQE--SNVAFLVVGDPFGATTHTDLVVRAKK-LGIQVKAVHNASVMNAV-GICGLQLYRFGET 135 (228)
Q Consensus 65 ~~-----e~~~~~i~~~a~~--~~Va~l~~GDP~~~~~~~~l~~~~~~-~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~ 135 (228)
.+ +.+.+.|++.+++ ++||+|++|||++|+++.++++.+.+ .|++++|||||||++++ +++|+|++++++.
T Consensus 103 ~~~~~~~~~~~~~i~~~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi~veviPGiSs~~aa~a~~g~pl~~~~~~ 182 (275)
T 3nd1_A 103 DWHDAIAETWLSEITAHVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPLTTKVIPGITAIQALCAAHAIPLNDIGAP 182 (275)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSEEEEEECCCCHHHHHHHHHTCCSSCTTCC
T ss_pred hhhHhHHHHHHHHHHHHHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCCCEEEecCccHHHHHHHHcCCCCccCCcE
Confidence 11 1233457777764 68999999999999999999999887 79999999999999975 6799999988655
Q ss_pred eEEec
Q 027097 136 VSIPF 140 (228)
Q Consensus 136 ~~v~~ 140 (228)
+.+..
T Consensus 183 ~~~l~ 187 (275)
T 3nd1_A 183 VVITT 187 (275)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 55543
No 21
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=99.91 E-value=1.4e-24 Score=182.63 Aligned_cols=148 Identities=18% Similarity=0.231 Sum_probs=97.9
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC-CCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~-~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
|+|+||+||| |++||+||+++|++||+|+++. ++++.++.+.+ +.... ...+++..+.+.+..+.
T Consensus 23 ~l~lVG~GpG-p~lLTlrA~~~L~~AdvI~~~~-----------~~l~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~g 88 (221)
T 2bb3_A 23 MIWIVGSGTC-RGQTTERAKEIIERAEVIYGSR-----------RALELAGVVDDSRARIL--RSFKGDEIRRIMEEGRE 88 (221)
T ss_dssp EEEEEECBSS-TTCCCHHHHHHHHHCSEEEECH-----------HHHHHTTCTTCTTEEEC--SCCSHHHHHHHHHHHHH
T ss_pred EEEEEEeCCC-hhHhHHHHHHHHHhCCEEEECH-----------HHHHHhhhhcCCceEec--cchHHHHHHHHHHhcCC
Confidence 6999999999 9999999999999999999742 22224443322 22222 12234455556533334
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR 158 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~ 158 (228)
++||+|++|||++|+.+.. +.++ ..|++++|||||||++++ |++|+||++ +.+.+.|+++.. +.+. .+
T Consensus 89 ~~Vv~L~~GDP~i~~~~~~-l~~~-~~~i~veviPGiSS~~aa~a~~g~pl~~------~~~vs~~~r~~~--~~l~-~l 157 (221)
T 2bb3_A 89 REVAVISTGDPMVAGLGRV-LREI-AEDVEIKIEPAISSVQVALARLKVDLSE------VAVVDCHAKDFD--AELT-EL 157 (221)
T ss_dssp SCEEEEESBCTTTTTSHHH-HHTS-CCSSEEEEECCCCHHHHHHHHHTCCGGG------EEEEEC----CC--HHHH-TH
T ss_pred CcEEEEeCCCCccccCHHH-HHHh-cCCCCEEEECCHHHHHHHHHHhCCCcee------EEEEeecCCCch--HHHH-HH
Confidence 8999999999999997754 4444 358999999999999975 679999995 233345554322 2222 23
Q ss_pred hcCCCeEEEEecccC
Q 027097 159 SLGLHTLCLLDIRVK 173 (228)
Q Consensus 159 ~~g~~tlvlld~~~~ 173 (228)
.....++++++....
T Consensus 158 ~~~~~~vvl~~~~~~ 172 (221)
T 2bb3_A 158 LKYRHLLILADSHFP 172 (221)
T ss_dssp HHHCEEEEEECTTCC
T ss_pred hcCCeEEEEECCCCC
Confidence 333477777876643
No 22
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=99.90 E-value=1.4e-23 Score=159.95 Aligned_cols=107 Identities=21% Similarity=0.331 Sum_probs=85.6
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-h-CCCeeecChhhHHHHHHHHHHHcC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-Y-GKPIALADREMVEEKADKILSESQ 78 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~-~~~i~~~~~~~~e~~~~~i~~~a~ 78 (228)
|||+||+||||+++||+||+++|++||+|++++... +.+ .++.+ . ++++...+...+++..+.+++.++
T Consensus 7 ~ly~VG~GpGd~~~lT~~a~~~L~~advv~~~~~~~------~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (117)
T 3hh1_A 7 TLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRR------TSI---LLKHFGIEGKRLVSYHSFNEERAVRQVIELLE 77 (117)
T ss_dssp CEEEEEECSSCGGGSCHHHHHHHHHCSEEEESCHHH------HHH---HHHHTTCCSCCEEECCSTTHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHhhHHHHHHHHhCCEEEEecCch------HHH---HHHHhCCCCCEEeccCCccHHHHHHHHHHHHH
Confidence 599999999999999999999999999999865311 112 44444 2 255554444456677788888887
Q ss_pred C-CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCC
Q 027097 79 E-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNA 116 (228)
Q Consensus 79 ~-~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGi 116 (228)
+ ++|++++ +|||++|+++.++++++++.|++++++||.
T Consensus 78 ~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viPGp 117 (117)
T 3hh1_A 78 EGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGA 117 (117)
T ss_dssp TTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC--
T ss_pred CCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeCCC
Confidence 6 8999999 899999999999999999999999999995
No 23
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A
Probab=97.00 E-value=0.0029 Score=47.10 Aligned_cols=96 Identities=19% Similarity=0.194 Sum_probs=52.9
Q ss_pred CCCCHHh-HHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhcCCCeEEEEecccC-CchhHHh-----------
Q 027097 114 HNASVMN-AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVK-EPSLESL----------- 180 (228)
Q Consensus 114 PGiSs~~-a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~g~~tlvlld~~~~-~~~~~~l----------- 180 (228)
||+||+. |++++|+|...| ..+.|... +. . ...-++.+.....|+||++.-.. .+.++.|
T Consensus 1 PG~sA~~~Al~~sGlp~~~F---~F~Gflp~--~~-~-r~~~l~~la~~~~TlVfyesp~Rl~~~l~~L~~~~g~~~~v~ 73 (115)
T 3ffy_A 1 SNATAFVPALVASGLPNEKF---CFEGFLPQ--KK-G-RMTKLKSLVDEHRTMVFYESPHRLLKTLTQFAEYFGPERQVS 73 (115)
T ss_dssp -CTTTHHHHHHHTTSCCSSE---EEEESCCS--ST-T-HHHHHHHTTTCCSEEEEEECTTTHHHHHHHHHHHHCTTCEEE
T ss_pred CchhHHHHHHHHcCCCCCcE---EEEeeCCC--Cc-c-HHHHHHHHhCCCCeEEEEechHHHHHHHHHHHHhcCCCCEEE
Confidence 8999977 567899998753 12222221 11 1 23345566666789998665533 2233333
Q ss_pred -hcc-ccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEEE
Q 027097 181 -CRG-KKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILK 223 (228)
Q Consensus 181 -~~~-~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~~ 223 (228)
+|+ +|.|+.-...++.+.++.+.+ +.+..+.++||+
T Consensus 74 v~relTk~~E~~~rgtl~el~~~~~~-------~~~kGe~vivv~ 111 (115)
T 3ffy_A 74 VSREISKIHEETVRGTLSELIEHFTA-------TDPRGEIVIVLA 111 (115)
T ss_dssp EEEESSSSCEEEEEEEHHHHHHHHHH-------SCCCSSEEEEEC
T ss_pred eeeccCCCceEEEEeeHHHHHHHHHh-------cCCCCCEEEEEe
Confidence 222 344444445678888877644 134556666664
No 24
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=72.14 E-value=25 Score=26.67 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=38.6
Q ss_pred HHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCCcEEEEe-cCCCCCccc
Q 027097 17 LRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLV-VGDPFGATT 95 (228)
Q Consensus 17 ~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~~Va~l~-~GDP~~~~~ 95 (228)
..-.++++.+|.|++-+... .... +..+....+.++... ...++..+.+.+.++.++++++. +|| ++..
T Consensus 84 ~~~~~~~~~aD~vi~~~~~~-----~~~~-~~~~~~~~~~~~~~~--~d~~eai~~~~~~~~~gDvVLv~Gsg~--~~~~ 153 (163)
T 3mvn_A 84 HELATSLQDADSVFIYQPPT-----IEWQ-VSEVLANLAQPAISA--DDVDELVMRIVQQAKPNDHILIMSNGA--FGGI 153 (163)
T ss_dssp HHHHHHHTTCSEEEEECC---------CC-HHHHHTTCCSCEEEE--SSHHHHHHHHHHHCCTTCEEEEECSSC--GGGH
T ss_pred HHHHHHHhcCCEEEEECCCC-----cccC-HHHHHhhCCCCeEEE--CCHHHHHHHHHHhCCCCCEEEEECCCC--HHHH
Confidence 33345677899888643210 0001 111111112233322 23455667777777778877776 787 5555
Q ss_pred HHHHHHH
Q 027097 96 HTDLVVR 102 (228)
Q Consensus 96 ~~~l~~~ 102 (228)
+..++..
T Consensus 154 ~~~l~~~ 160 (163)
T 3mvn_A 154 HQKLLTA 160 (163)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 25
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=57.29 E-value=60 Score=24.48 Aligned_cols=100 Identities=17% Similarity=0.121 Sum_probs=56.1
Q ss_pred ChhhHHHHHHHHHHHcCCCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECC-CCHHhHHHHhCCccccCCceeEEec
Q 027097 62 DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHN-ASVMNAVGICGLQLYRFGETVSIPF 140 (228)
Q Consensus 62 ~~~~~e~~~~~i~~~a~~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPG-iSs~~a~a~~Gl~l~~~~~~~~v~~ 140 (228)
+.+.+++.++.|.+ .++|.+.-.|.. +....++...+...|.++..+++ .+.+..... .+ .. .. .++.
T Consensus 25 ~~~~l~~~~~~i~~---a~~I~i~G~G~S--~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~-~~--~~--~d-~~i~ 93 (187)
T 3sho_A 25 QPEAIEAAVEAICR---ADHVIVVGMGFS--AAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLA-NL--RP--TD-LMIG 93 (187)
T ss_dssp CHHHHHHHHHHHHH---CSEEEEECCGGG--HHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHH-TC--CT--TE-EEEE
T ss_pred CHHHHHHHHHHHHh---CCEEEEEecCch--HHHHHHHHHHHHhcCCCEEEecCCchhHHHHHh-cC--CC--CC-EEEE
Confidence 34445555554422 367777777753 33444555667778999999994 444432221 11 11 12 2333
Q ss_pred ccCCCCCCChHHHHHHHhhcCCCeEEEEeccc
Q 027097 141 FTETWRPGSFYEKIKRNRSLGLHTLCLLDIRV 172 (228)
Q Consensus 141 ~~~~~~p~~~~~~i~~~~~~g~~tlvlld~~~ 172 (228)
.|..+......+.+....++|..++.+.+...
T Consensus 94 iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 94 VSVWRYLRDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp ECCSSCCHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred EeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 35555433335555666677999999988653
No 26
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=56.52 E-value=40 Score=27.31 Aligned_cols=65 Identities=11% Similarity=0.195 Sum_probs=34.6
Q ss_pred chhhHHHHHHHH--hCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCC--CcEEEEecC
Q 027097 13 RDITLRGLEAVK--KCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQE--SNVAFLVVG 88 (228)
Q Consensus 13 ~~lT~~A~~~L~--~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~--~~Va~l~~G 88 (228)
+.-...|.+.++ .+|+|+..|.+.. .+++..+.+++...-..++ ..+ .+..+++ ++|+++..+
T Consensus 49 e~av~~a~~~~~~~~~dVIISRGgta~-----------~Lr~~~~iPVV~I~vs~~D-il~-aL~~a~~~~~kIavVg~~ 115 (225)
T 2pju_A 49 EKAVTYIRKKLANERCDAIIAAGSNGA-----------YLKSRLSVPVILIKPSGYD-VLQ-FLAKAGKLTSSIGVVTYQ 115 (225)
T ss_dssp HHHHHHHHHHTTTSCCSEEEEEHHHHH-----------HHHTTCSSCEEEECCCHHH-HHH-HHHHTTCTTSCEEEEEES
T ss_pred HHHHHHHHHHHhcCCCeEEEeCChHHH-----------HHHhhCCCCEEEecCCHHH-HHH-HHHHHHhhCCcEEEEeCc
Confidence 333344555555 3899997765432 3444444555432222222 333 3344554 689998877
Q ss_pred CC
Q 027097 89 DP 90 (228)
Q Consensus 89 DP 90 (228)
+.
T Consensus 116 ~~ 117 (225)
T 2pju_A 116 ET 117 (225)
T ss_dssp SC
T ss_pred hh
Confidence 65
No 27
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=54.91 E-value=73 Score=24.94 Aligned_cols=62 Identities=10% Similarity=0.093 Sum_probs=32.0
Q ss_pred HHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCC--CcEEEEecCCCC
Q 027097 17 LRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQE--SNVAFLVVGDPF 91 (228)
Q Consensus 17 ~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~--~~Va~l~~GDP~ 91 (228)
..|.+.=+.+|+|+..|.+.. .+++..+.+++...-..++ ..+.+ ..+++ ++++++..++..
T Consensus 43 ~~a~~~~~~~dVIISRGgta~-----------~lr~~~~iPVV~I~~s~~D-il~al-~~a~~~~~kIavvg~~~~~ 106 (196)
T 2q5c_A 43 KIAFGLQDEVDAIISRGATSD-----------YIKKSVSIPSISIKVTRFD-TMRAV-YNAKRFGNELALIAYKHSI 106 (196)
T ss_dssp HHHHHHTTTCSEEEEEHHHHH-----------HHHTTCSSCEEEECCCHHH-HHHHH-HHHGGGCSEEEEEEESSCS
T ss_pred HHHHHhcCCCeEEEECChHHH-----------HHHHhCCCCEEEEcCCHhH-HHHHH-HHHHhhCCcEEEEeCcchh
Confidence 334443245788887665421 3444445555442222222 33333 33443 689999887763
No 28
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=48.30 E-value=59 Score=25.25 Aligned_cols=53 Identities=13% Similarity=0.012 Sum_probs=35.1
Q ss_pred EecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeee
Q 027097 5 IGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60 (228)
Q Consensus 5 VG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~ 60 (228)
+++=|.|++.|...-.++++++|+|+.-+.++.-..++..+ .+.+..++++..
T Consensus 42 ~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~~~~D~T~e---a~a~~~~~~l~~ 94 (172)
T 3kbq_A 42 GFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGPTFDDMTVE---GFAKCIGQDLRI 94 (172)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCSEEEEESCCSSSTTCCHHH---HHHHHHTCCCEE
T ss_pred EEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcCCcccchHH---HHHHHcCCCeee
Confidence 34447788888877778889999999877654321112233 666667777765
No 29
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=46.46 E-value=36 Score=25.04 Aligned_cols=46 Identities=22% Similarity=0.227 Sum_probs=26.7
Q ss_pred HHHHHHcCC-CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhH
Q 027097 71 DKILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121 (228)
Q Consensus 71 ~~i~~~a~~-~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a 121 (228)
...++...+ +-|.+|+ .|.|+-.. ..+. .+.+.++++|.|++---+
T Consensus 52 ~~~i~~~d~~~GVLiL~DmGSp~n~a--~~l~---~~~~~~v~vI~gvnlpml 99 (130)
T 3gx1_A 52 KQTVVKLNPVKGVLILSDMGSLTSFG--NILT---EELGIRTKTVTMVSTPVV 99 (130)
T ss_dssp HHHHHTSCCTTCEEEEECSGGGGTHH--HHHH---HHHCCCEEEECSCCHHHH
T ss_pred HHHHHhhCCCCCEEEEEeCCCHHHHH--HHHH---HhcCCCEEEEeCCCHHHH
Confidence 334444444 5577766 88885321 1222 222578999999997544
No 30
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=39.97 E-value=47 Score=25.14 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=29.0
Q ss_pred HHHHHcCCCcEEEEecCCCCCcccHHHHHHHHHhC-CCcEEEEC
Q 027097 72 KILSESQESNVAFLVVGDPFGATTHTDLVVRAKKL-GIQVKAVH 114 (228)
Q Consensus 72 ~i~~~a~~~~Va~l~~GDP~~~~~~~~l~~~~~~~-gi~v~viP 114 (228)
.+++.+..-+.++|++||- -+..++++++++ |..|.++.
T Consensus 101 D~~~~a~~~d~~vLvSgD~----DF~plv~~lr~~~G~~V~v~g 140 (165)
T 2qip_A 101 DAIEIAPDVDRVILVSGDG----DFSLLVERIQQRYNKKVTVYG 140 (165)
T ss_dssp HHHHHGGGCSEEEEECCCG----GGHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHhhccCCEEEEEECCh----hHHHHHHHHHHHcCcEEEEEe
Confidence 3445554468899999995 455788888996 99998873
No 31
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=34.71 E-value=63 Score=24.02 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=22.6
Q ss_pred CcEEEEe-cCCCCCcccHHHHHHHHHh-CCCcEEEECCCCHHhH
Q 027097 80 SNVAFLV-VGDPFGATTHTDLVVRAKK-LGIQVKAVHNASVMNA 121 (228)
Q Consensus 80 ~~Va~l~-~GDP~~~~~~~~l~~~~~~-~gi~v~viPGiSs~~a 121 (228)
+-|.+|+ .|.|+-. ...+.+ .+.++++|.|++---+
T Consensus 64 ~GVLiL~DmGSp~n~------a~~l~~~~~~~v~vI~gvnlpml 101 (139)
T 3gdw_A 64 NGILLLTDMGSLNSF------GNMLFEETGIRTKAITMTSTMIV 101 (139)
T ss_dssp TCEEEEECSGGGGGH------HHHHHHHHCCCEEEECSCCHHHH
T ss_pred CCEEEEEeCCCHHHH------HHHHHHhhCCCEEEEeCCCHHHH
Confidence 4566666 8888422 222222 2678999999997544
No 32
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=30.92 E-value=46 Score=26.71 Aligned_cols=42 Identities=14% Similarity=0.144 Sum_probs=30.2
Q ss_pred CCCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHH
Q 027097 78 QESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119 (228)
Q Consensus 78 ~~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~ 119 (228)
++|++++..+|-...|-....+++.+++.|++|.++---++.
T Consensus 4 ~~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 347899999997666642447888898899999988766654
No 33
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=30.71 E-value=47 Score=26.44 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=31.7
Q ss_pred CCCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCH
Q 027097 78 QESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASV 118 (228)
Q Consensus 78 ~~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs 118 (228)
+.+++++..+|--..|.-...+++.+++.|++|.++---++
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 34789999999877774455888899889999998865544
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=29.43 E-value=23 Score=26.78 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=20.7
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCc
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAY 34 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~ 34 (228)
+.|||.||.+ ||....=+-+..+++++|..
T Consensus 5 V~IIGaGpaG---L~aA~~La~~G~~V~v~Ek~ 34 (336)
T 3kkj_A 5 IAIIGTGIAG---LSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp EEEECCSHHH---HHHHHHHHHTTCCEEEECSS
T ss_pred EEEECcCHHH---HHHHHHHHHCCCCEEEEECC
Confidence 6799999965 55544333345699999854
No 35
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=28.56 E-value=1.3e+02 Score=22.89 Aligned_cols=32 Identities=13% Similarity=-0.005 Sum_probs=23.4
Q ss_pred EecCCCCcchhhHHHHHHHHh--CCEEEEeCccc
Q 027097 5 IGLGLGDERDITLRGLEAVKK--CDKVYIEAYTS 36 (228)
Q Consensus 5 VG~GpG~~~~lT~~A~~~L~~--aDvV~~~~~~s 36 (228)
.++=|.|++.|...-.+++++ +|+|+.-+.++
T Consensus 47 ~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 47 KAIVKENRYAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 344477888887777777875 99999876654
No 36
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=27.98 E-value=1.6e+02 Score=22.27 Aligned_cols=110 Identities=9% Similarity=0.080 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHH------HhCCCcEEEECCCCHH-hHHH-HhCCc-------
Q 027097 65 MVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRA------KKLGIQVKAVHNASVM-NAVG-ICGLQ------- 128 (228)
Q Consensus 65 ~~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~------~~~gi~v~viPGiSs~-~a~a-~~Gl~------- 128 (228)
.+++.++.+.+...+ ++|.+.-.|... ....++...+ ...|+++..+++-++. .+.. -.+..
T Consensus 30 ~i~~~~~~i~~~i~~a~~I~i~G~G~S~--~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 107 (199)
T 1x92_A 30 YIEQASLVMVNALLNEGKILSCGNGGSA--GDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQI 107 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECSTHHH--HHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCchhH--HHHHHHHHHHhcCcccCCCCCceEecCCChhHHHHhhcCccHHHHHHHHH
Confidence 355566666565555 788777677532 2233444445 3467777777654333 3332 12221
Q ss_pred --cccCCceeEEecccCCCCCCChHHHHHHHhhcCCCeEEEEecccCCchhHHh
Q 027097 129 --LYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180 (228)
Q Consensus 129 --l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~g~~tlvlld~~~~~~~~~~l 180 (228)
....+ . .++..|..+......+.+....++|..++.+.+... ..+..+
T Consensus 108 ~~~~~~~-D-vvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~--s~La~~ 157 (199)
T 1x92_A 108 RALGQPG-D-VLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDG--GGMASL 157 (199)
T ss_dssp HHHCCTT-C-EEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTC--HHHHHH
T ss_pred HhCCCCC-C-EEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCC--CcHHhc
Confidence 11112 2 233345555443445566666677888988988643 244555
No 37
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=27.41 E-value=2.1e+02 Score=22.35 Aligned_cols=111 Identities=10% Similarity=0.109 Sum_probs=60.4
Q ss_pred ChhhHHHHHHHHHHHc-C-CCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEe
Q 027097 62 DREMVEEKADKILSES-Q-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIP 139 (228)
Q Consensus 62 ~~~~~e~~~~~i~~~a-~-~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~ 139 (228)
+.+.+++.++.|.+.+ . .++|.++-.|.. +....++...+...|.++..++......... +....+. .++
T Consensus 40 d~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S--~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~----~~~~~~D--lvI 111 (220)
T 3etn_A 40 VTDAYEKAVELIVEQIHRKKGKLVTSGMGKA--GQIAMNIATTFCSTGIPSVFLHPSEAQHGDL----GILQEND--LLL 111 (220)
T ss_dssp CCTHHHHHHHHHHHHTTTTCCCEEEECSHHH--HHHHHHHHHHHHHTTCCEEECCTTGGGBTGG----GGCCTTC--EEE
T ss_pred CHHHHHHHHHHHHhHhhccCCEEEEEEecHH--HHHHHHHHHHHHhcCCcEEEeCCHHHHHhhh----ccCCCCC--EEE
Confidence 4556777777776622 2 378888777753 2234445556777889998887543222111 1111122 233
Q ss_pred cccCCCCCCChHHHHHHHhh--cCCCeEEEEecccCCchhHHhhc
Q 027097 140 FFTETWRPGSFYEKIKRNRS--LGLHTLCLLDIRVKEPSLESLCR 182 (228)
Q Consensus 140 ~~~~~~~p~~~~~~i~~~~~--~g~~tlvlld~~~~~~~~~~l~~ 182 (228)
..|..+......+.+..... +|..++.+.+.... .+..++.
T Consensus 112 ~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s--~La~~aD 154 (220)
T 3etn_A 112 LISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDS--PLASESD 154 (220)
T ss_dssp EECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTS--HHHHHSS
T ss_pred EEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCC--hhHHhCC
Confidence 33444543333455555555 78889888876532 3444443
No 38
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=27.13 E-value=64 Score=25.16 Aligned_cols=39 Identities=10% Similarity=-0.005 Sum_probs=30.7
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHH
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~ 119 (228)
+++.+..+|-...| -...+++.+++.|++|+++---++.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 57888889988777 4558888898889999998655543
No 39
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=25.45 E-value=1.6e+02 Score=21.23 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=32.3
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHH
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~ 119 (228)
=+|.++-.|....+....++.+.++++||.+|+.+--.+.
T Consensus 62 ~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~~A~ 101 (122)
T 2ab1_A 62 VQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTEQAV 101 (122)
T ss_dssp CSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHHHHH
T ss_pred CCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHHHHH
Confidence 5799999999987755668888999999999998654443
No 40
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=24.83 E-value=1.3e+02 Score=24.36 Aligned_cols=61 Identities=20% Similarity=0.184 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCCcEEEEecCCCCCcccHHHHHHHHHhC----CCcEEEECCCCHH-hHHHHhCCccccCCc
Q 027097 69 KADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKL----GIQVKAVHNASVM-NAVGICGLQLYRFGE 134 (228)
Q Consensus 69 ~~~~i~~~a~~~~Va~l~~GDP~~~~~~~~l~~~~~~~----gi~v~viPGiSs~-~a~a~~Gl~l~~~~~ 134 (228)
+++..+++.+++.+..|-+|. |..++++++.++ +.++.++|.--.. +.+...|+++...+.
T Consensus 8 iA~~A~~~V~dg~vIgLGsGS-----T~~~~i~~L~~~~~~~~~~i~~VttS~~t~~~l~~~Gi~l~~l~~ 73 (225)
T 3l7o_A 8 AGVRAAQYVEDGMIVGLGTGS-----TAYYFVEEVGRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDE 73 (225)
T ss_dssp HHHHHHTTCCTTCEEEECCST-----THHHHHHHHHHHHHHHCCCCEEEESSHHHHHHHHHHTCCBCCGGG
T ss_pred HHHHHHHhCCCCCEEEECCcH-----HHHHHHHHHHHhhhhcCCCEEEEcCCHHHHHHHhccCceEEecCc
Confidence 445555555668899998884 666777766543 5567777643222 223457998876543
No 41
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=23.85 E-value=2.3e+02 Score=21.21 Aligned_cols=102 Identities=8% Similarity=0.079 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHH------hCCCcEEEECCCC-HHhHHHH-hCCc--------
Q 027097 66 VEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAK------KLGIQVKAVHNAS-VMNAVGI-CGLQ-------- 128 (228)
Q Consensus 66 ~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~------~~gi~v~viPGiS-s~~a~a~-~Gl~-------- 128 (228)
.++..+.+.+...+ ++|.+.-.|... ....++..++. ..|+++..+++-. .++|++. .+..
T Consensus 27 i~~~~~~~~~~i~~a~~I~i~G~G~S~--~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~ 104 (196)
T 2yva_A 27 ISRAAMTLVQSLLNGNKILCCGNGTSA--ANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVR 104 (196)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESTHHH--HHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCchhh--HHHHHHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHH
Confidence 33455666666555 788887777532 23334444455 5678887776432 2233321 1211
Q ss_pred -cccCCceeEEecccCCCCCCChHHHHHHHhhcCCCeEEEEecc
Q 027097 129 -LYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 129 -l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~g~~tlvlld~~ 171 (228)
....+ . .++..|..+......+.+....++|..++.+.+..
T Consensus 105 ~~~~~~-D-vvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~ 146 (196)
T 2yva_A 105 ALGHAG-D-VLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYD 146 (196)
T ss_dssp HHCCTT-C-EEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred hcCCCC-C-EEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 11112 2 23333555544344566666667798999998865
No 42
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=23.77 E-value=59 Score=27.14 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=21.4
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCcE
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQV 110 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v 110 (228)
-+.+++.|||.+.++. .+++.+.+.|.++
T Consensus 22 li~yi~aGdP~~~~~~-~~~~~l~~~GaD~ 50 (271)
T 3nav_A 22 FVPFVTIGDPNPEQSL-AIMQTLIDAGADA 50 (271)
T ss_dssp EEEEEETTSSCHHHHH-HHHHHHHHTTCSS
T ss_pred EEEEEeCCCCCHHHHH-HHHHHHHHcCCCE
Confidence 4889999999876654 6777777776543
No 43
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=21.86 E-value=85 Score=23.52 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=16.2
Q ss_pred EEEecCCCCCcccH-HHHHHHHHhCCCcEEEE
Q 027097 83 AFLVVGDPFGATTH-TDLVVRAKKLGIQVKAV 113 (228)
Q Consensus 83 a~l~~GDP~~~~~~-~~l~~~~~~~gi~v~vi 113 (228)
+.++.|.|+++.-. ..+++.+++.|+.+.+.
T Consensus 7 v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~ 38 (182)
T 3can_A 7 VTFCGGEPLLHPEFLIDILKRCGQQGIHRAVD 38 (182)
T ss_dssp EEECSSTGGGSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEcccccCCHHHHHHHHHHHHHCCCcEEEE
Confidence 33445666555433 25555555555555555
No 44
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.40 E-value=80 Score=26.21 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=20.3
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCc
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQ 109 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~ 109 (228)
-+.++..|||.+..+. .+++.+.+.|.+
T Consensus 20 li~yi~aGdP~~~~~~-~~~~~l~~~GaD 47 (267)
T 3vnd_A 20 FVPFVTIGDPSPELSL-KIIQTLVDNGAD 47 (267)
T ss_dssp EEEEEETTSSCHHHHH-HHHHHHHHTTCS
T ss_pred EEEEEeCCCCCHHHHH-HHHHHHHHcCCC
Confidence 4788899999776554 666777777654
No 45
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=21.12 E-value=3e+02 Score=21.99 Aligned_cols=87 Identities=11% Similarity=0.056 Sum_probs=44.1
Q ss_pred HHHHHHH--hCCEEEEeCcc-cccccCCC--cchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCCcEEEEecCCCCC
Q 027097 18 RGLEAVK--KCDKVYIEAYT-SLLSFGLS--TDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFG 92 (228)
Q Consensus 18 ~A~~~L~--~aDvV~~~~~~-s~l~~~~~--~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~~Va~l~~GDP~~ 92 (228)
++.+.|+ .+|+|.+...+ +.+ .|.. ....+.++...+.++.- ..+...+ .+.....++|+++.+
T Consensus 57 ~aa~~L~~ag~d~i~~aCtsas~~-~G~~~~~~~~~~l~~~~~iPv~~----~~~A~~~-al~~~g~~rvglltp----- 125 (240)
T 3ixl_A 57 DHARRLQKQGAAVVSLMCTSLSFY-RGAAFNAALTVAMREATGLPCTT----MSTAVLN-GLRALGVRRVALATA----- 125 (240)
T ss_dssp HHHHHHHHTTEEEEEECCHHHHHT-TCHHHHHHHHHHHHHHHSSCEEE----HHHHHHH-HHHHTTCSEEEEEES-----
T ss_pred HHHHHhccCCCCEEEECCcHHHHh-cccchHHHHHHHHHhccCCCEEC----HHHHHHH-HHHHhCCCEEEEEeC-----
Confidence 3444554 57999987554 322 1110 12123444444555542 1222222 233333489999975
Q ss_pred cccH--HHHHHHHHhCCCcEEEECC
Q 027097 93 ATTH--TDLVVRAKKLGIQVKAVHN 115 (228)
Q Consensus 93 ~~~~--~~l~~~~~~~gi~v~viPG 115 (228)
|++. ....+.+.+.|+++....+
T Consensus 126 y~~~~~~~~~~~l~~~Giev~~~~~ 150 (240)
T 3ixl_A 126 YIDDVNERLAAFLAEESLVPTGCRS 150 (240)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ChHHHHHHHHHHHHHCCCEEecccc
Confidence 3333 2344557888998766544
No 46
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=20.66 E-value=1.7e+02 Score=24.92 Aligned_cols=43 Identities=19% Similarity=0.154 Sum_probs=32.2
Q ss_pred CCCcEEEEecC--------CC------CC-cccHHHHHHHHHhCCCcEEEECCCCHHh
Q 027097 78 QESNVAFLVVG--------DP------FG-ATTHTDLVVRAKKLGIQVKAVHNASVMN 120 (228)
Q Consensus 78 ~~~~Va~l~~G--------DP------~~-~~~~~~l~~~~~~~gi~v~viPGiSs~~ 120 (228)
.+++++++++| || +. ..++..+.+.+.++|.+|..+.|..++.
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~ 92 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAF 92 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCC
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcC
Confidence 45787888877 35 11 2377788888999999999999987654
No 47
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=20.22 E-value=1.8e+02 Score=21.56 Aligned_cols=79 Identities=13% Similarity=0.150 Sum_probs=43.5
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS 159 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~ 159 (228)
++|.++-.|... ....++...+...|.++..++... .+....+. .++..|..+......+.+.....
T Consensus 41 ~~I~i~G~G~S~--~~A~~~~~~l~~~g~~~~~~~~~~---------~~~~~~~d--~vi~iS~sG~t~~~~~~~~~ak~ 107 (180)
T 1jeo_A 41 KKIFIFGVGRSG--YIGRCFAMRLMHLGFKSYFVGETT---------TPSYEKDD--LLILISGSGRTESVLTVAKKAKN 107 (180)
T ss_dssp SSEEEECCHHHH--HHHHHHHHHHHHTTCCEEETTSTT---------CCCCCTTC--EEEEEESSSCCHHHHHHHHHHHT
T ss_pred CEEEEEeecHHH--HHHHHHHHHHHHcCCeEEEeCCCc---------cccCCCCC--EEEEEeCCCCcHHHHHHHHHHHH
Confidence 678777676432 233345555666788888775431 11112222 23333444543333455555566
Q ss_pred cCCCeEEEEecc
Q 027097 160 LGLHTLCLLDIR 171 (228)
Q Consensus 160 ~g~~tlvlld~~ 171 (228)
+|..++.+.+..
T Consensus 108 ~g~~vi~IT~~~ 119 (180)
T 1jeo_A 108 INNNIIAIVCEC 119 (180)
T ss_dssp TCSCEEEEESSC
T ss_pred CCCcEEEEeCCC
Confidence 788899888865
Done!