Query 027097
Match_columns 228
No_of_seqs 249 out of 2052
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 07:39:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027097.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027097hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2deka1 c.90.1.1 (A:1-265) Dip 100.0 7E-38 5.1E-42 268.4 21.3 208 1-227 2-211 (265)
2 d1wdea_ c.90.1.1 (A:) Diphthin 100.0 3.5E-38 2.6E-42 273.4 17.8 206 1-227 4-217 (289)
3 d1vhva_ c.90.1.1 (A:) Diphthin 100.0 2.8E-37 2E-41 262.6 21.2 194 1-227 2-197 (251)
4 d1ve2a1 c.90.1.1 (A:1-235) Uro 99.9 1.5E-27 1.1E-31 198.3 15.5 133 2-145 5-145 (235)
5 d1s4da_ c.90.1.1 (A:) Uroporph 99.9 6.8E-27 5E-31 198.3 19.0 161 2-172 12-182 (265)
6 d1cbfa_ c.90.1.1 (A:) Cobalt p 99.9 9.5E-26 6.9E-30 187.2 20.8 162 2-172 11-175 (239)
7 d2bb3a1 c.90.1.1 (A:1-195) Pre 99.9 1.5E-26 1.1E-30 188.1 10.2 148 1-172 1-149 (195)
8 d1pjqa2 c.90.1.1 (A:216-457) S 99.9 1.2E-24 8.6E-29 180.8 16.2 133 2-145 3-145 (242)
9 d1wyza1 c.90.1.1 (A:2-234) Put 99.9 4.2E-22 3E-26 166.6 13.3 159 2-171 4-174 (233)
10 d1va0a1 c.90.1.1 (A:2-226) Hyp 99.8 2.4E-20 1.8E-24 152.2 15.4 155 2-172 3-163 (225)
11 d1zpda1 c.31.1.3 (A:188-362) P 60.0 13 0.00098 26.6 7.0 53 62-114 4-57 (175)
12 d1p9oa_ c.72.3.1 (A:) Phosphop 46.9 17 0.0012 28.7 6.0 42 78-119 16-72 (290)
13 d2jfga2 c.59.1.1 (A:298-437) U 46.2 7.1 0.00052 27.5 3.2 28 65-92 92-119 (140)
14 d1ii7a_ d.159.1.4 (A:) Mre11 { 42.1 23 0.0017 26.8 6.1 50 67-116 26-84 (333)
15 d1w85b2 c.48.1.2 (B:193-324) P 35.8 13 0.00093 25.5 3.1 36 80-117 10-45 (132)
16 d1p3y1_ c.34.1.1 (1:) MrsD {Ba 34.8 14 0.001 27.2 3.4 42 77-119 4-45 (183)
17 d1qs0b1 c.36.1.7 (B:2-205) 2-o 34.8 69 0.005 23.6 7.6 127 71-207 13-164 (204)
18 d1ovma1 c.31.1.3 (A:181-341) I 34.0 15 0.0011 25.9 3.4 53 62-114 11-64 (161)
19 d2pjua1 c.92.3.1 (A:11-196) Pr 31.6 86 0.0063 22.6 7.6 60 18-90 42-105 (186)
20 d1pl8a2 c.2.1.1 (A:146-316) Ke 30.1 56 0.0041 22.5 6.1 29 2-32 30-58 (171)
21 d1umdb2 c.48.1.2 (B:188-324) B 30.0 18 0.0013 24.8 3.1 36 80-117 16-51 (137)
22 d1qopa_ c.1.2.4 (A:) Trp synth 27.7 22 0.0016 27.8 3.5 29 81-110 19-47 (267)
23 d1vj0a2 c.2.1.1 (A:156-337) Hy 27.4 72 0.0053 22.1 6.4 27 3-32 33-60 (182)
24 d1gpma2 c.23.16.1 (A:3-207) GM 25.9 37 0.0027 24.4 4.5 37 78-118 4-40 (205)
25 d2nzug1 c.93.1.1 (G:58-332) Gl 25.1 19 0.0014 26.7 2.7 63 65-130 17-86 (275)
26 d2ozlb2 c.48.1.2 (B:192-329) E 25.0 23 0.0017 24.4 2.9 35 80-116 14-48 (138)
27 d1wu7a1 c.51.1.1 (A:330-426) H 24.9 32 0.0024 21.9 3.5 50 80-130 4-57 (97)
28 d1g5qa_ c.34.1.1 (A:) Epidermi 24.5 30 0.0022 25.1 3.5 40 80-120 3-42 (174)
29 d2q4qa1 c.103.1.1 (A:2-122) Hy 23.3 86 0.0062 21.1 5.7 40 80-119 61-100 (121)
30 d1tjya_ c.93.1.1 (A:) AI-2 rec 23.2 15 0.0011 27.7 1.6 66 64-130 16-89 (316)
31 d1rd5a_ c.1.2.4 (A:) Trp synth 22.7 31 0.0022 26.7 3.5 28 81-109 19-46 (261)
32 d1pvda1 c.31.1.3 (A:182-360) P 22.0 50 0.0037 23.3 4.5 48 67-114 17-65 (179)
33 d1dbqa_ c.93.1.1 (A:) Purine r 21.0 18 0.0013 26.9 1.7 49 65-116 14-65 (282)
No 1
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=7e-38 Score=268.37 Aligned_cols=208 Identities=43% Similarity=0.720 Sum_probs=177.3
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHc-CC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSES-QE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a-~~ 79 (228)
|||+||+|||||++||+||+++|++||+|+|+++++.+ .....+.++.+.+++.....+..+++..++++..+ ++
T Consensus 2 ~Ly~VG~GPG~pe~lT~~A~~~l~~aDvV~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (265)
T d2deka1 2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLM----AGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKE 77 (265)
T ss_dssp EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC----TTCCHHHHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHCCCEEEECCCCCcc----cHHHHHHHHHhcCCceeccCcchHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999999999988654 12223356666666655555666666656555444 45
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS 159 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~ 159 (228)
++|++|++|||++|+++.++++.+++.|++++|+||||+++|++++|.+.+.++.+.++.+.+.++.|.++++.+..+..
T Consensus 78 ~~V~~l~~GDP~~~~~~~~l~~~~~~~~i~vevvPGiSs~~Aaaa~g~~~~~~~~~~s~~~~~~~~~~~~~~e~i~~~~~ 157 (265)
T d2deka1 78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE 157 (265)
T ss_dssp SEEEEEESBCTTTTSSTHHHHHHHHHTTCEEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred CCEEEEecCccccchhHHHHHHHHHhcCCCceecCCccHHHHHHHhCCCccccCceEEEEEeecCCcCCcchhhHHHHHH
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eeccc
Q 027097 160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQT 227 (228)
Q Consensus 160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~~ 227 (228)
.+.+++++++..... ..+|++.++.++|+++.+..+++.++++|++++ .++++
T Consensus 158 ~~~~~~~~~~~~~~~---------------~~~~~~~~a~~~L~ei~~~l~~~g~~~dtpv~v~~~~g~ 211 (265)
T d2deka1 158 RGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGS 211 (265)
T ss_dssp HTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEESTTS
T ss_pred cCCchhhhhhhcCcc---------------cEEecHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCC
Confidence 999999999987432 578999999999999999999999999987776 45543
No 2
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}
Probab=100.00 E-value=3.5e-38 Score=273.44 Aligned_cols=206 Identities=30% Similarity=0.375 Sum_probs=169.2
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhH-HhhHhCCCeeecChhhHHHHHHHHHHHcCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLST-LEKLYGKPIALADREMVEEKADKILSESQE 79 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~-l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~ 79 (228)
|||+||+|||+ ++||+||+++|++||+||++++++.. .....+. .+...++++...++...++..+.+++.+++
T Consensus 4 ~l~iVGlGpG~-eliTlrA~~~L~~aDvI~~e~~~~~~----~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~i~~~a~~ 78 (289)
T d1wdea_ 4 TLLLVGWGYAP-GMQTLEALDAVRRADVVYVESYTMPG----SSWLYKSVVEAAGEARVVEASRRDLEERSREIVSRALD 78 (289)
T ss_dssp EEEEEECBSST-TCCCHHHHHHHHHCSEEEEECSSSTT----CHHHHHHHHHHHTSSSEEECCHHHHHTSHHHHTCCSSC
T ss_pred EEEEEEeccCc-hHHHHHHHHHHHcCCEEEEccCCchh----hhhhhhhhhhhccCCceeccccchHHHHHHHHHHHhcC
Confidence 59999999995 99999999999999999999987532 0111112 232345566656666677777788887777
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR 158 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~ 158 (228)
++|++|++|||++|+++.+++.++++.|+++++||||||++|+ |++|+|+++|+.+.++++...+++|.++++.++.|+
T Consensus 79 ~~va~L~~GDP~i~~~~~~l~~~~~~~gi~v~vIPGiSs~~aA~a~~Gl~~~~f~~~~sl~~~~~~~~p~s~~~~i~~~~ 158 (289)
T d1wdea_ 79 AVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNL 158 (289)
T ss_dssp CEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCCCCHHHHHHHHHHH
T ss_pred CCeEEEeCCCCcccccHHHHHHHHHhcCCcEEEECCHhHHHHHHHHhCCCcccccEEEEeeeecCCcCCCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 689999999999999999999999999999999999
Q ss_pred hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCC-----CCCCCCcEEEE-Eeccc
Q 027097 159 SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGE-----SGKAHELKIIL-KQLQT 227 (228)
Q Consensus 159 ~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~-----~~~~~~~~~v~-~~~~~ 227 (228)
..|.||++|+|++.. .++|.+.++..+|+++.++... ..+.+++.+++ .|+++
T Consensus 159 ~~~l~tlvl~~~~~~----------------~~~m~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~v~v~~~lg~ 217 (289)
T d1wdea_ 159 CAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPSVLVEAGAGG 217 (289)
T ss_dssp HHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCEEEEECCGGG
T ss_pred HcCCchhhhhhcccc----------------CceeeHHHHHHHHHHHHHHHHHhccchhhhCCCCeEEEEEeCCC
Confidence 999999999999843 5789999999999998766532 24455655554 56654
No 3
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=2.8e-37 Score=262.61 Aligned_cols=194 Identities=35% Similarity=0.647 Sum_probs=159.0
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES 80 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~ 80 (228)
|||+||+|||||++||+||+++|++||+|++++|++.+ ....+.+..++++++...++..+++..+.+++.++++
T Consensus 2 mL~iVG~GpG~~~~iT~~a~~~l~~advv~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 76 (251)
T d1vhva_ 2 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-----LSSIEEMEEFFGKRVVELERSDLEENSFRLIERAKSK 76 (251)
T ss_dssp EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC-----SSCHHHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTS
T ss_pred eEEEEeeCCCCHHHHHHHHHHHHHcCCEEEEcCCCccc-----hhcHHHHHHHhCCccccCcchhHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987654 1112255556677666666766666677788887779
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS 159 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~ 159 (228)
+|++|++|||++|+++.++++.+.++|++++|+|||||++|+ +++|+|+++|+...++++.. +.++++.++.+..
T Consensus 77 ~vv~L~~GDP~i~~~~~~l~~~~~~~gi~vevvPGiSs~~aaaa~~gl~~~~~~~~~~i~~~~----~~~~~~~i~~~~~ 152 (251)
T d1vhva_ 77 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSWHR----SQTPVNVIKANRS 152 (251)
T ss_dssp EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECSSC----CSHHHHHHHHHHH
T ss_pred cEEEEecCCccccchHHHHHHHHHHcCCCcEEEecchHHHHHHHHhCCCccccceeEeeeccC----CCCchhhHHHHHh
Confidence 999999999999999999999999999999999999999975 67999999999998887643 3456899999999
Q ss_pred cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEE-EEeccc
Q 027097 160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII-LKQLQT 227 (228)
Q Consensus 160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v-~~~~~~ 227 (228)
.+.||+|+++.. .++|.+.++.++++..+. ..+++.++ +.|+++
T Consensus 153 ~~~~Tlv~~~~~------------------~~~~~~~~~~~~ll~~~~------~~~d~~v~vv~~lg~ 197 (251)
T d1vhva_ 153 IDAHTLLFLDLH------------------PEPMTIGHAVENLIAEDA------QMKDLYAVGIARAGS 197 (251)
T ss_dssp TTCBEEEEECCS------------------SSCCCHHHHHHHHHHHCG------GGGGSEEEEEESTTS
T ss_pred cCCCcEEEeccc------------------cccchHHHHHHHHHHHcC------CCCCCcEEEEEeCCC
Confidence 999999999987 457899999988876433 24455544 466553
No 4
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]}
Probab=99.95 E-value=1.5e-27 Score=198.26 Aligned_cols=133 Identities=21% Similarity=0.277 Sum_probs=102.5
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh------CCCeeecChhhHHHHHHHHHH
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY------GKPIALADREMVEEKADKILS 75 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~------~~~i~~~~~~~~e~~~~~i~~ 75 (228)
||+||+|||||++||+||+++|++||+|+++.+.+ .+ .++... ++... .....+++..+.+.+
T Consensus 5 l~iVG~GPGdp~~lT~~a~~~L~~aDvV~~~~~~~-------~~---~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 73 (235)
T d1ve2a1 5 VYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVH-------PG---VLALAKGELVPVGKEGY-GGKTPQEAITARLIA 73 (235)
T ss_dssp EEEEECBSSSGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTCCSEEEEC--------CCCHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHcCCEEEEECCCC-------HH---HHHhhhhhccccceecc-cccchHHHHHHHHHH
Confidence 89999999999999999999999999999876532 12 222111 11111 112235566677778
Q ss_pred HcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCC
Q 027097 76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 145 (228)
Q Consensus 76 ~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~ 145 (228)
.+++ ++|+++++|||++|+++.++++.+.+++++++|||||||++++ |++|++|++++....+...+.+.
T Consensus 74 ~~~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~i~veviPGiSs~~aaaa~~g~~~~~~~~~~~~~~~~~~~ 145 (235)
T d1ve2a1 74 LAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD 145 (235)
T ss_dssp HHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC
T ss_pred HHHcCCeEEEEecccccccchHHHHHHHHhhCCCCEEEeccccHHHhhhhhcCCcccccccccccccccchh
Confidence 7777 8899999999999999999999999999999999999999975 67999999888777666655443
No 5
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]}
Probab=99.95 E-value=6.8e-27 Score=198.30 Aligned_cols=161 Identities=14% Similarity=0.166 Sum_probs=117.9
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC-CCeee------cChhhHHHHHHHHH
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIAL------ADREMVEEKADKIL 74 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~-~~i~~------~~~~~~e~~~~~i~ 74 (228)
||+||+|||||++||+||+++|++||+|+++.+.. .+ .++.... ..... ......++..+.++
T Consensus 12 l~iVG~GPGdp~~iT~~a~~~L~~ADvV~~~~~~~-------~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (265)
T d1s4da_ 12 VWLVGAGPGDPGLLTLHAANALRQADVIVHDALVN-------ED---CLKLARPGAVLEFAGKRGGKPSPKQRDISLRLV 81 (265)
T ss_dssp EEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSC-------TT---GGGGSSTTCCEEECSCCC--CCCCHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHcCCEEEEccccC-------HH---HHhhcccccEeeecccccccccchhHHHHHHHH
Confidence 89999999999999999999999999999875532 22 2221111 11111 11123455666777
Q ss_pred HHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh-H
Q 027097 75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-Y 151 (228)
Q Consensus 75 ~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~-~ 151 (228)
+.+++ ++|+++++|||++|+++..+.+.+.+.|++++|+|||||++++ +++|++++.++.+.++.+.+.+...... .
T Consensus 82 ~~a~~G~~V~~l~~GDp~~~~~~~~~~~~~~~~~~~~eViPGiss~~aa~a~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (265)
T d1s4da_ 82 ELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPD 161 (265)
T ss_dssp HHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC-------
T ss_pred HHHHCCCcEEEEecCCcccccchHHHHHHHHhcCCceEEecccccchhhHHHhhhhcccCCCceEEEEecCCCccccccc
Confidence 88877 8999999999999999999999999999999999999999976 5799999998888777777666543221 1
Q ss_pred HHHHHHhhcCCCeEEEEeccc
Q 027097 152 EKIKRNRSLGLHTLCLLDIRV 172 (228)
Q Consensus 152 ~~i~~~~~~g~~tlvlld~~~ 172 (228)
......+.....|+++++...
T Consensus 162 ~~~l~~~~~~~~~~v~~~~~~ 182 (265)
T d1s4da_ 162 RINWQGIASGSPVIVMYMAMK 182 (265)
T ss_dssp CCCHHHHHTTCSEEEEESCST
T ss_pred hHHHHHHhccCcceeccchHH
Confidence 122345556778988877653
No 6
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]}
Probab=99.94 E-value=9.5e-26 Score=187.17 Aligned_cols=162 Identities=22% Similarity=0.199 Sum_probs=121.3
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC-CeeecChhhHHHHHHHHHHHcCC-
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQE- 79 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~-~i~~~~~~~~e~~~~~i~~~a~~- 79 (228)
||+||+|||||++||++|+++|++||+|+++++. ...+ .++.+... .........+.+..+.+.+.+++
T Consensus 11 lyiVG~GpGdp~~lT~~A~~~L~~aDvv~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (239)
T d1cbfa_ 11 LYIIGAGPGDPDLITVKGLKLLQQADVVLYADSL------VSQD---LIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREG 81 (239)
T ss_dssp EEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCHH---HHTTSCTTCEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCCHHHHHHHHHHHHHcCCEEEEeCCc------CCHH---HHhhhcccccccccccchHHHHHHHHHHHhhcC
Confidence 8999999999999999999999999999986542 1122 34433322 22222223355556666666666
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR 158 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~ 158 (228)
++|+++++|||++|+++.++...+.+.+++++|+|||||++++ +++|++++.++...++.+.+.|.+............
T Consensus 82 ~~V~~l~~Gdp~~~~~~~~~~~~~~~~~~~~~vipGiss~~~a~a~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (239)
T d1cbfa_ 82 KMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTDL 161 (239)
T ss_dssp CCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSSSCCCGGGCHHHH
T ss_pred ceEEEeeccccccccccccccccccccceeeEeccCccchhhhhhhcCcccccCcceeeeeeecccCCCccchHHHHHHH
Confidence 8999999999999999999999999999999999999999975 679999999988888888777776433333333455
Q ss_pred hcCCCeEEEEeccc
Q 027097 159 SLGLHTLCLLDIRV 172 (228)
Q Consensus 159 ~~g~~tlvlld~~~ 172 (228)
..+.++.+++....
T Consensus 162 ~~~~~~~~~~~~~~ 175 (239)
T d1cbfa_ 162 AKHKCTIALFLSST 175 (239)
T ss_dssp HTTCSEEEEESCTT
T ss_pred hhcccccccccccc
Confidence 56667777766554
No 7
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.93 E-value=1.5e-26 Score=188.06 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=104.2
Q ss_pred CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097 1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES 80 (228)
Q Consensus 1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~ 80 (228)
|||+||+|||+++ ||+||+++|++||+|+++. ++++.+..+...+.........+ ....+.+.++++
T Consensus 1 mi~~vG~GpG~~~-lT~rA~~~l~~advv~g~~-----------~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~ 67 (195)
T d2bb3a1 1 MIWIVGSGTCRGQ-TTERAKEIIERAEVIYGSR-----------RALELAGVVDDSRARILRSFKGD-EIRRIMEEGRER 67 (195)
T ss_dssp EEEEEECBSSTTC-CCHHHHHHHHHCSEEEECH-----------HHHHHTTCTTCTTEEECSCCSHH-HHHHHHHHHHHS
T ss_pred CEEEEecCCCChH-HHHHHHHHHHhCCEEEECc-----------hHHhhhhcccCCeEEecCCccHH-HHHHHHHHHcCC
Confidence 9999999999986 8999999999999999643 22233433333333222222222 334455555568
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS 159 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~ 159 (228)
+||+|+.|||++|+++.++.+++. +.+++++|||||++++ |++|+|+.++ .. .+.|+++ .+.+...+.
T Consensus 68 ~vv~L~~GDP~iy~~~~~l~~~~~--~~~~eviPGiss~~aaaa~~~~p~~~~---~~---i~~~~~~---~~~~~~~l~ 136 (195)
T d2bb3a1 68 EVAVISTGDPMVAGLGRVLREIAE--DVEIKIEPAISSVQVALARLKVDLSEV---AV---VDCHAKD---FDAELTELL 136 (195)
T ss_dssp CEEEEESBCTTTTTSHHHHHTSCC--SSEEEEECCCCHHHHHHHHHTCCGGGE---EE---EEC-------CCHHHHTHH
T ss_pred CeEEEEcCCCcccchhHHHhhhhc--ccceecCCcchhhhhHHHHhcCCCCCc---EE---EecCCCC---hHHHHHHhh
Confidence 999999999999999988887664 4689999999999975 5799999753 22 2445554 345666777
Q ss_pred cCCCeEEEEeccc
Q 027097 160 LGLHTLCLLDIRV 172 (228)
Q Consensus 160 ~g~~tlvlld~~~ 172 (228)
.+.++++|+|...
T Consensus 137 ~~~~~~vl~~~~~ 149 (195)
T d2bb3a1 137 KYRHLLILADSHF 149 (195)
T ss_dssp HHCEEEEEECTTC
T ss_pred cCCeEEEEeCCcc
Confidence 8888999988653
No 8
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]}
Probab=99.92 E-value=1.2e-24 Score=180.80 Aligned_cols=133 Identities=23% Similarity=0.277 Sum_probs=102.0
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC-CCeee-------cChhhHHHHHHHH
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIAL-------ADREMVEEKADKI 73 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~-~~i~~-------~~~~~~e~~~~~i 73 (228)
||+||+|||||++||+||+++|++||+|+++.+.. . .+..+.. +.... .....+++..+.+
T Consensus 3 l~~VGiGPGdp~~lT~ra~~~l~~Advv~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (242)
T d1pjqa2 3 VVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVS-------D----DIMNLVRRDADRVFVGKRAGYHCVPQEEINQIL 71 (242)
T ss_dssp EEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------H----HHHTTSCTTSEEEECSCC---CCCTTHHHHHHH
T ss_pred EEEEeeCCCChHHHHHHHHHHHHcCCEEEEEcccC-------H----HHHhhhhhhccccccccccccchhhHHHHHHHH
Confidence 89999999999999999999999999999765321 1 2222222 11111 1122356667777
Q ss_pred HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCC
Q 027097 74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 145 (228)
Q Consensus 74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~ 145 (228)
.+.+.+ ++|+++++|||++|+++..+.+.+.+.+++++++||+||++++ |++|+++..++...+..+...+.
T Consensus 72 ~~~~~~g~~V~~l~~Gdp~~~~~~~~l~~~~~~~~~~v~vipGiss~~~aaa~~~~~~~~~~~~~~~~~~~~~~ 145 (242)
T d1pjqa2 72 LREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHL 145 (242)
T ss_dssp HHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--
T ss_pred HHHHHCCCeEEEEeCCCcceecchhhHHHHHhhcCceEeecCCcchHHHHHHHhhhccccCCceeeeeecccCC
Confidence 777766 8999999999999999999999999999999999999999964 67999999888777766655433
No 9
>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.87 E-value=4.2e-22 Score=166.57 Aligned_cols=159 Identities=16% Similarity=0.171 Sum_probs=102.1
Q ss_pred EEEEecCCCCc---chhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCC-----eeecChhhHHHHHHH
Q 027097 2 LYIIGLGLGDE---RDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKP-----IALADREMVEEKADK 72 (228)
Q Consensus 2 l~iVG~GpG~~---~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~-----i~~~~~~~~e~~~~~ 72 (228)
||+|++|+||. ++||+||+++|++||+|+||+.... .. .|..+- ..+ ....+.....+....
T Consensus 4 Lylv~tpiGnl~~~~~it~ra~~~l~~~d~i~~Edtr~~------~~---lL~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 74 (233)
T d1wyza1 4 LYLLPVTLGDTPLEQVLPSYNTEIIRGIRHFIVEDVRSA------RR---FLKKVDREIDIDSLTFYPLNKHTSPEDISG 74 (233)
T ss_dssp EEEECCCSSSSCHHHHSCTHHHHHHTTCCEEEESCHHHH------HH---HHHHHCSSSCTTCCCCEECCSSCCHHHHHH
T ss_pred EEEEcCCCCCCchhhhcCHHHHHHHHhCCEEEEEeCHHH------HH---HHHHcCCccccchhhhhhhhhhhhHHHhHH
Confidence 89999999995 7999999999999999999875321 22 444331 111 122222222333455
Q ss_pred HHHHcCC-CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhH-HHHhCCccccCCceeEEecccCCCCCCC
Q 027097 73 ILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGS 149 (228)
Q Consensus 73 i~~~a~~-~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a-~a~~Gl~l~~~~~~~~v~~~~~~~~p~~ 149 (228)
+++.+.+ ++|++++ .|||++++++.++++.+.+.|++++++||+||+.+ ++.+|++.++|.-.-.+++...+.. .
T Consensus 75 i~~~l~~g~~v~lvsDaG~P~IsDPG~~lV~~~~~~gi~v~iiPG~SA~~aA~s~sG~~~~~~~f~gfl~~~~~~~~--~ 152 (233)
T d1wyza1 75 YLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSFAFHGYLPIEPGERA--K 152 (233)
T ss_dssp HHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSEEEEEECCSSTTHHH--H
T ss_pred HHHHHhcCCeEEEEeccccccccchhhhhhhhhhcccccccccccCcchheeeeeccccccccccceeeeeecCccc--c
Confidence 6666655 8999997 99999999999999999999999999999999886 4679999988754444433322211 1
Q ss_pred hHHHHHHHhhcCCCeEEEEecc
Q 027097 150 FYEKIKRNRSLGLHTLCLLDIR 171 (228)
Q Consensus 150 ~~~~i~~~~~~g~~tlvlld~~ 171 (228)
....+.........|+++++..
T Consensus 153 ~~~~l~~~~~~~~~t~v~~e~~ 174 (233)
T d1wyza1 153 KLKTLEQRVYAESQTQLFIETP 174 (233)
T ss_dssp HHHHHHHHHHHHTCEEEEEECG
T ss_pred hhhhhhhhhhccCceeEEEecc
Confidence 1223333334444677776544
No 10
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]}
Probab=99.84 E-value=2.4e-20 Score=152.21 Aligned_cols=155 Identities=19% Similarity=0.161 Sum_probs=99.7
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC----CeeecChhhHHHHHHHHHHHc
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK----PIALADREMVEEKADKILSES 77 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~----~i~~~~~~~~e~~~~~i~~~a 77 (228)
||+||+|||||++||+||+++|++||+|+++.+. ..+ .++.+... ...........+..+.....+
T Consensus 3 l~~VGiGPGdpd~lTlkA~~~l~~aDvI~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (225)
T d1va0a1 3 VYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLV-------DER---VLALAPGEKVYVGKEEGESEKQEEIHRLLLRHA 72 (225)
T ss_dssp EEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTS-------CHH---HHTTCCSEEEECCCCC----CHHHHHHHHHHHH
T ss_pred EEEEecCCCChHHHHHHHHHHHHhCCEEEEEcCc-------CHH---HHHhccccceeeccccccchhHHHHHHHHHHHh
Confidence 8999999999999999999999999999986532 122 22211111 111111122333444444555
Q ss_pred CC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHH
Q 027097 78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK 155 (228)
Q Consensus 78 ~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~ 155 (228)
.+ ++++++..|||++++++..+.......++.++++||+||++++ ++.+.++........ +.+..+. .....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipgiss~~~a~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~ 146 (225)
T d1va0a1 73 RAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLASGLPLTHRGLAHGFAAV----SGVLEGG--GYPDL 146 (225)
T ss_dssp HTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTTCCCSSBTTTBSEEEEE----ESSCGGG--CCCCC
T ss_pred hccceEEEecCCcccccchhHHHHhhhccccceEEECCcccHHHHHhhccccCccccceeEE----EeecCCc--chhHH
Confidence 55 6778889999999999988888888899999999999999975 567877765432222 2222111 11122
Q ss_pred HHhhcCCCeEEEEeccc
Q 027097 156 RNRSLGLHTLCLLDIRV 172 (228)
Q Consensus 156 ~~~~~g~~tlvlld~~~ 172 (228)
+.+.....+++++....
T Consensus 147 ~~~~~~~~~~~~~~~~~ 163 (225)
T d1va0a1 147 RPFARVPTLVVLMGVGR 163 (225)
T ss_dssp TTTTTCSSEEEESCSTT
T ss_pred HHHhhcccceeeecccc
Confidence 34555666666665543
No 11
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=60.02 E-value=13 Score=26.61 Aligned_cols=53 Identities=23% Similarity=0.177 Sum_probs=41.4
Q ss_pred ChhhHHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEEC
Q 027097 62 DREMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVH 114 (228)
Q Consensus 62 ~~~~~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viP 114 (228)
|+..++...+++++.+.+ ++.++++.|.--.+.....+.+.+.+.|++|-.-+
T Consensus 4 d~~~l~~~v~~~~~~l~~AkrPvIi~G~g~~~~~a~~~l~~lae~~~~Pv~tt~ 57 (175)
T d1zpda1 4 DEASLNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMA 57 (175)
T ss_dssp CHHHHHHHHHHHHHHHTTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCCEEEEG
T ss_pred ChHHHHHHHHHHHHHHHcCCCEEEEECcCccccchHHHHHHHHHhhceeEEecc
Confidence 456677777888888777 99999998888777777777777788888887554
No 12
>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.86 E-value=17 Score=28.73 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=32.4
Q ss_pred CCCcEEEEecC------C--C-------CCcccHHHHHHHHHhCCCcEEEECCCCHH
Q 027097 78 QESNVAFLVVG------D--P-------FGATTHTDLVVRAKKLGIQVKAVHNASVM 119 (228)
Q Consensus 78 ~~~~Va~l~~G------D--P-------~~~~~~~~l~~~~~~~gi~v~viPGiSs~ 119 (228)
.+++++++++| | | ....++..+.+.+..+|.+|..+.|..|+
T Consensus 16 ~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 16 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred cCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 34788888888 6 6 22235777888899999999999888765
No 13
>d2jfga2 c.59.1.1 (A:298-437) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=46.21 E-value=7.1 Score=27.47 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHcCCCcEEEEecCCCCC
Q 027097 65 MVEEKADKILSESQESNVAFLVVGDPFG 92 (228)
Q Consensus 65 ~~e~~~~~i~~~a~~~~Va~l~~GDP~~ 92 (228)
.+++....+.+.++..++++++||.|.+
T Consensus 92 ~l~~av~~a~~~~~~g~~VLlSPa~aSf 119 (140)
T d2jfga2 92 TMEQAMRLLAPRVQPGDMVLLSPACASL 119 (140)
T ss_dssp SHHHHHHHHGGGCCTTCEEEECCSSBST
T ss_pred HHHHHHHHHHHhcccCCEEEECCCccch
Confidence 3566666666666667899999999964
No 14
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=42.09 E-value=23 Score=26.78 Aligned_cols=50 Identities=28% Similarity=0.338 Sum_probs=30.2
Q ss_pred HHHHHHHHHHcCCCcE-EEEecCCCCCcc-----c---HHHHHHHHHhCCCcEEEECCC
Q 027097 67 EEKADKILSESQESNV-AFLVVGDPFGAT-----T---HTDLVVRAKKLGIQVKAVHNA 116 (228)
Q Consensus 67 e~~~~~i~~~a~~~~V-a~l~~GDP~~~~-----~---~~~l~~~~~~~gi~v~viPGi 116 (228)
.+..+++++.+.++++ +++.+||=+=.. . ....+..+.+.|+++-++||=
T Consensus 26 ~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~i~GN 84 (333)
T d1ii7a_ 26 AEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGN 84 (333)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEECCT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEEeCCC
Confidence 3455666666655555 567799953211 1 122334456678999999995
No 15
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=35.81 E-value=13 Score=25.49 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=23.7
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCC
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS 117 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiS 117 (228)
++|++++.|. +++- .....+.+++.|+.++|+-=-+
T Consensus 10 ~dvtIis~G~-~~~~-al~Aa~~L~~~gi~~~vid~~~ 45 (132)
T d1w85b2 10 KDITIIAYGA-MVHE-SLKAAAELEKEGISAEVVDLRT 45 (132)
T ss_dssp SSEEEEECTT-HHHH-HHHHHHHHHHTTCCEEEEECSE
T ss_pred CCEEEEEChH-HHHH-HHHHHHHHHhcCCCeEEEeeec
Confidence 7899999993 3332 2234455777899998876443
No 16
>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}
Probab=34.85 E-value=14 Score=27.22 Aligned_cols=42 Identities=7% Similarity=0.089 Sum_probs=31.3
Q ss_pred cCCCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHH
Q 027097 77 SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119 (228)
Q Consensus 77 a~~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~ 119 (228)
+++|++.+.++|--..|... ++++.+++.|.+|+++---++-
T Consensus 4 l~~KkIllgvTGsiaa~k~~-~l~~~L~~~g~eV~vv~T~~A~ 45 (183)
T d1p3y1_ 4 LKDKKLLIGICGSISSVGIS-SYLLYFKSFFKEIRVVMTKTAE 45 (183)
T ss_dssp GGGCEEEEEECSCGGGGGTH-HHHHHHTTTSSEEEEEECHHHH
T ss_pred cCCCEEEEEEeCHHHHHHHH-HHHHHHHHCCCeEEEEEEcchh
Confidence 35689999999965555444 6778888889999988766553
No 17
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]}
Probab=34.82 E-value=69 Score=23.60 Aligned_cols=127 Identities=17% Similarity=0.061 Sum_probs=65.2
Q ss_pred HHHHHHcC-CCcEEEEe--cCCC-CCcccHHHHHHHH-HhCCCcEEEECCCCHHhHHH-HhCCccccCCceeEEecccCC
Q 027097 71 DKILSESQ-ESNVAFLV--VGDP-FGATTHTDLVVRA-KKLGIQVKAVHNASVMNAVG-ICGLQLYRFGETVSIPFFTET 144 (228)
Q Consensus 71 ~~i~~~a~-~~~Va~l~--~GDP-~~~~~~~~l~~~~-~~~gi~v~viPGiSs~~a~a-~~Gl~l~~~~~~~~v~~~~~~ 144 (228)
+.+.+.++ ++++.++- .||+ .+|++...+.+++ .++ -+=-|||=-..++ +.|+.+.-.-..+.+.+...-
T Consensus 13 ~al~e~m~~d~~v~~~Gedv~~~Gg~f~~t~gl~~kfgp~R----v~dtpIaE~~~vG~A~GlA~~G~rPvve~~~~df~ 88 (204)
T d1qs0b1 13 SAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSR----VFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYF 88 (204)
T ss_dssp HHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTT----EEECCSCHHHHHHHHHHHHHHTCEEEEECSCGGGC
T ss_pred HHHHHHHhhCCCEEEEecCCCccCCccccchHHHHHHhhhh----eecccccceeehhHHHHHhcCCCcEEEEEEecchh
Confidence 33444444 47888884 5687 5676666677776 443 3556777544332 344444422222233333322
Q ss_pred CCCCChHHHHHHHhh---------cCCCeEEEEecc-------cCCchhHHhhc---cccccCCCCccCHHHHHHHHHHH
Q 027097 145 WRPGSFYEKIKRNRS---------LGLHTLCLLDIR-------VKEPSLESLCR---GKKLYEPPRYMTVNIAIEQLLEV 205 (228)
Q Consensus 145 ~~p~~~~~~i~~~~~---------~g~~tlvlld~~-------~~~~~~~~l~~---~~~~~~~~~~~~~~~a~~~ll~~ 205 (228)
++ .+|.|..++. .....++-.-.. .+.+..+.+++ +++++.|. ++.+|...|...
T Consensus 89 ~~---a~dqi~n~~ak~~~~~~~~~~~p~vir~~~g~~~~~g~~Hs~~~~s~~~~iPgl~Vv~Ps---~~~da~~ll~~a 162 (204)
T d1qs0b1 89 YP---ASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPS---NPYDAKGLLIAS 162 (204)
T ss_dssp GG---GHHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSCCSSSSCCCHHHHTTSTTCEEECCC---SHHHHHHHHHHH
T ss_pred hH---HHHHHHHHHHHhhcccccCcccceEEEcCcccccCcccccccCHHHHHhcCCCcEEEeeC---CHHHHHHHHHHH
Confidence 22 2566654442 111222222221 23456677775 46666654 788888887775
Q ss_pred HH
Q 027097 206 EL 207 (228)
Q Consensus 206 ~~ 207 (228)
-+
T Consensus 163 ~~ 164 (204)
T d1qs0b1 163 IE 164 (204)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 18
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=34.05 E-value=15 Score=25.87 Aligned_cols=53 Identities=11% Similarity=-0.009 Sum_probs=37.7
Q ss_pred ChhhHHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEEC
Q 027097 62 DREMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVH 114 (228)
Q Consensus 62 ~~~~~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viP 114 (228)
+.+.+++..+++.+.+.+ ++.+++..+.-.-++....+.+.+++.|++|-..+
T Consensus 11 ~~~~l~a~~~~a~~~l~~AkrP~il~G~gv~~~~a~~~l~~l~e~~~iPv~tt~ 64 (161)
T d1ovma1 11 DSACLKAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATML 64 (161)
T ss_dssp CHHHHHHHHHHHHHHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECG
T ss_pred CHHHHHHHHHHHHHHHHcCCCcEEEECcCcChhhhHHHHHHHHHhcCccEEEcC
Confidence 556677777777777776 89999986655556666566666777788776544
No 19
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=31.59 E-value=86 Score=22.61 Aligned_cols=60 Identities=12% Similarity=0.227 Sum_probs=32.4
Q ss_pred HHHHHH--HhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCC--CcEEEEecCCC
Q 027097 18 RGLEAV--KKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQE--SNVAFLVVGDP 90 (228)
Q Consensus 18 ~A~~~L--~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~--~~Va~l~~GDP 90 (228)
.+.+.+ +.+|+|+..|.+.. .+++....+++...-..++ ..+ .+..+++ ++++++..+..
T Consensus 42 ~~~~~~~~~~~DviISRG~ta~-----------~ir~~~~iPVV~I~vs~~D-il~-al~~a~~~~~kiavV~~~~~ 105 (186)
T d2pjua1 42 YIRKKLANERCDAIIAAGSNGA-----------YLKSRLSVPVILIKPSGYD-VLQ-FLAKAGKLTSSIGVVTYQET 105 (186)
T ss_dssp HHHHHTTTSCCSEEEEEHHHHH-----------HHHTTCSSCEEEECCCHHH-HHH-HHHHTTCTTSCEEEEEESSC
T ss_pred HHHHHHHcCCCCEEEECchHHH-----------HHHHhCCCCEEEEcCCHhH-HHH-HHHHHHHhCCCEEEEeCCcc
Confidence 344444 35899997776532 4555445555442222222 333 3344554 68999877654
No 20
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.14 E-value=56 Score=22.52 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=16.1
Q ss_pred EEEEecCCCCcchhhHHHHHHHHhCCEEEEe
Q 027097 2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIE 32 (228)
Q Consensus 2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~ 32 (228)
+.++|.|| -.+++....+..--..+++.+
T Consensus 30 VlI~G~G~--iG~~~~~~a~~~G~~~Vi~~d 58 (171)
T d1pl8a2 30 VLVCGAGP--IGMVTLLVAKAMGAAQVVVTD 58 (171)
T ss_dssp EEEECCSH--HHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEECCCc--cHHHHHHHHHHcCCceEEecc
Confidence 34566655 356777666665333455544
No 21
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=30.03 E-value=18 Score=24.83 Aligned_cols=36 Identities=8% Similarity=0.211 Sum_probs=22.3
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCC
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS 117 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiS 117 (228)
+++++++.|. ++... .+..+.+++.|+.++|+.=-|
T Consensus 16 ~dvtiis~G~-~~~~a-l~aa~~L~~~gi~~~vid~~~ 51 (137)
T d1umdb2 16 KDLTLICYGT-VMPEV-LQAAAELAKAGVSAEVLDLRT 51 (137)
T ss_dssp SSEEEEECGG-GHHHH-HHHHHHHHHTTCCEEEEECCE
T ss_pred CCEEEEEcch-hhhhh-hhhhhcccccCcceEEEeecc
Confidence 6788888883 33322 234445667788888875443
No 22
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=27.66 E-value=22 Score=27.77 Aligned_cols=29 Identities=21% Similarity=0.302 Sum_probs=20.3
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCcE
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQV 110 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v 110 (228)
-|.+++.|||..-++. +++..+.+.|+++
T Consensus 19 li~y~t~G~P~~~~~~-~~~~~l~~~GaDi 47 (267)
T d1qopa_ 19 FVPFVTLGDPGIEQSL-KIIDTLIDAGADA 47 (267)
T ss_dssp EEEEEETTSSCHHHHH-HHHHHHHHTTCSS
T ss_pred EEEEEeCcCCCHHHHH-HHHHHHHHcCCCE
Confidence 3778889999755444 6777777777554
No 23
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=27.38 E-value=72 Score=22.14 Aligned_cols=27 Identities=15% Similarity=0.078 Sum_probs=13.2
Q ss_pred EEEecCCCCcchhhHHHHHHHHhC-CEEEEe
Q 027097 3 YIIGLGLGDERDITLRGLEAVKKC-DKVYIE 32 (228)
Q Consensus 3 ~iVG~GpG~~~~lT~~A~~~L~~a-DvV~~~ 32 (228)
.|+|+|| -.++.....+.+ .| .++..+
T Consensus 33 lV~GaG~--iG~~~~~~ak~~-Ga~~Vi~~~ 60 (182)
T d1vj0a2 33 VIQGAGP--LGLFGVVIARSL-GAENVIVIA 60 (182)
T ss_dssp EEECCSH--HHHHHHHHHHHT-TBSEEEEEE
T ss_pred EEECCCc--cchhheeccccc-ccccccccc
Confidence 4555553 455555555544 34 344433
No 24
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}
Probab=25.95 E-value=37 Score=24.44 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=26.2
Q ss_pred CCCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCH
Q 027097 78 QESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASV 118 (228)
Q Consensus 78 ~~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs 118 (228)
.+++|+++-.|+-+ ...+.+.+++.|++++|+|.=.+
T Consensus 4 ~~~kI~IiD~G~~~----~~~I~r~lr~lg~~~~I~~~d~~ 40 (205)
T d1gpma2 4 HKHRILILDFGSQY----TQLVARRVRELGVYCELWAWDVT 40 (205)
T ss_dssp TSSEEEEEECSCTT----HHHHHHHHHHTTCEEEEEESCCC
T ss_pred ccCeEEEEECCchH----HHHHHHHHHHCCCEEEEECCCCC
Confidence 34689999988732 12356778889999999986433
No 25
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=25.07 E-value=19 Score=26.66 Aligned_cols=63 Identities=10% Similarity=-0.004 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHcCC--CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHH-hH---HHHhCCccc
Q 027097 65 MVEEKADKILSESQE--SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM-NA---VGICGLQLY 130 (228)
Q Consensus 65 ~~e~~~~~i~~~a~~--~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~-~a---~a~~Gl~l~ 130 (228)
.+.+..+.+.+.+.+ -++.+.. .+|| ......+..+...++.--++-+...- .. +...+.|..
T Consensus 17 f~~~~~~gi~~~~~~~g~~~~~~~~~~~~---~~e~~~i~~~~~~~vdgii~~~~~~~~~~~~~l~~~~~pvv 86 (275)
T d2nzug1 17 FYAELARGIEDIATMYKYNIILSNSDQNQ---DKELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVV 86 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHTTCCSEEEECCSCCCHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCH---HHHHHHHHHHHhcCCceeeccccchhhHHHHHHhhcccccc
Confidence 344555555555544 2444443 3333 12233455566666766665554322 21 234666653
No 26
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.96 E-value=23 Score=24.35 Aligned_cols=35 Identities=6% Similarity=0.089 Sum_probs=22.9
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCC
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNA 116 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGi 116 (228)
+++++++.|. ++.. .....+.+++.|++++++-=.
T Consensus 14 ~ditiis~G~-~~~~-al~aa~~L~~~gi~~~vid~~ 48 (138)
T d2ozlb2 14 THITVVSHSR-PVGH-CLEAAAVLSKEGVECEVINMR 48 (138)
T ss_dssp SSEEEEECST-HHHH-HHHHHHHHHTTTCCEEEEECC
T ss_pred CCEEEEEccH-HHHh-HHHHhhhhcccCcceEEEEec
Confidence 6899999994 2222 123345567789999998433
No 27
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=24.86 E-value=32 Score=21.86 Aligned_cols=50 Identities=14% Similarity=0.162 Sum_probs=36.4
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhH-H---HHhCCccc
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-V---GICGLQLY 130 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a-~---a~~Gl~l~ 130 (228)
+.|.++..|+-.. .....+...+++.|+.+++-++-.++.. + ...|.|+.
T Consensus 4 ~~V~i~~~g~~~~-~~~~~l~~~Lr~~gi~v~~d~~~~~l~kq~~~A~~~~~~~~ 57 (97)
T d1wu7a1 4 KSVYICRVGKINS-SIMNEYSRKLRERGMNVTVEIMERGLSAQLKYASAIGADFA 57 (97)
T ss_dssp CEEEEEEESSCCH-HHHHHHHHHHHTTTCEEEECCSCCCHHHHHHHHHHTTCSEE
T ss_pred ceEEEEEeCHHHH-HHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhcCCCeE
Confidence 6788888887543 3344677889999999999988877763 3 34777763
No 28
>d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD {Staphylococcus epidermidis [TaxId: 1282]}
Probab=24.53 E-value=30 Score=25.12 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=31.7
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHh
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~ 120 (228)
+++.+..+|-...|-.. .+++++++.|.+|+++---|+..
T Consensus 3 ~kIll~vtGsiaa~k~~-~li~~L~~~g~~V~vv~T~sA~~ 42 (174)
T d1g5qa_ 3 GKLLICATASINVININ-HYIVELKQHFDEVNILFSPSSKN 42 (174)
T ss_dssp SCEEEEECSCGGGGGHH-HHHHHHTTTBSCEEEEECGGGGG
T ss_pred CeEEEEEECHHHHHHHH-HHHHHHHHCCCeEEEEEehhhhh
Confidence 45888889988777544 78888999999999998777754
No 29
>d2q4qa1 c.103.1.1 (A:2-122) Hypothetical protein PTD015 (C11orf67) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.27 E-value=86 Score=21.05 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=30.5
Q ss_pred CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHH
Q 027097 80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119 (228)
Q Consensus 80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~ 119 (228)
=++.++=.|.......-..+++.++++|+.+++.+-.++.
T Consensus 61 peilliGtG~~~~~~l~~~~~~~l~~~gi~ve~m~T~~Ac 100 (121)
T d2q4qa1 61 VQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTEQAV 100 (121)
T ss_dssp CSEEEEECCSSCCSCCCHHHHHHHHTTTCEEEEECHHHHH
T ss_pred CCEEEEcCCCCcccCCCHHHHHHHHHcCCceEEeCHHHHH
Confidence 4788888998766544446788899999999998655544
No 30
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=23.23 E-value=15 Score=27.68 Aligned_cols=66 Identities=14% Similarity=0.160 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHcCC-C-cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCH--Hh-HH---HHhCCccc
Q 027097 64 EMVEEKADKILSESQE-S-NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASV--MN-AV---GICGLQLY 130 (228)
Q Consensus 64 ~~~e~~~~~i~~~a~~-~-~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs--~~-a~---a~~Gl~l~ 130 (228)
..+....+-+.+.+++ + ++.+..+.+.- ...-...++.+...++..-|+.+..+ +. .+ ...|+|..
T Consensus 16 pf~~~~~~g~~~~a~~~G~~v~~~~~~~~d-~~~q~~~i~~~i~~~~dgIIi~~~~~~~~~~~~~~a~~~gi~vv 89 (316)
T d1tjya_ 16 GFFTSGGNGAQEAGKALGIDVTYDGPTEPS-VSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKIL 89 (316)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEECCCSSCC-HHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCC-HHHHHHHHHHHHhcCCCeeeecccccchhhhhhhhhhcccccce
Confidence 3455555556555555 3 34443232211 12233455666677888777655533 22 22 24676654
No 31
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=22.71 E-value=31 Score=26.75 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=18.7
Q ss_pred cEEEEecCCCCCcccHHHHHHHHHhCCCc
Q 027097 81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQ 109 (228)
Q Consensus 81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~ 109 (228)
-|.+++.|||..-++. .+++.+.+.|++
T Consensus 19 li~y~~aG~P~~~~~~-~~l~~l~~~G~D 46 (261)
T d1rd5a_ 19 FIPYITAGDPDLATTA-EALRLLDGCGAD 46 (261)
T ss_dssp EEEEEETTSSCHHHHH-HHHHHHHHTTCS
T ss_pred EEEEEeCcCCCHHHHH-HHHHHHHHcCCC
Confidence 5788888888765544 566666666653
No 32
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.01 E-value=50 Score=23.32 Aligned_cols=48 Identities=13% Similarity=-0.001 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEEC
Q 027097 67 EEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVH 114 (228)
Q Consensus 67 e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viP 114 (228)
++..+.+++.+.+ ++.++++.+.-.-++....+.+.+++.|++|-.-+
T Consensus 17 ~~~i~~~~~~l~~AkrPvii~G~g~~~~~a~~~l~~lae~~~~Pv~tt~ 65 (179)
T d1pvda1 17 KEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTP 65 (179)
T ss_dssp HHHHHHHHHHHHHCSSEEEEECGGGTTTSTHHHHHHHHHHHCCCEEECG
T ss_pred HHHHHHHHHHHHhCCCCEEEEecccchhhhHHHHHHHHHhhCceEEecc
Confidence 3445566666655 88999987766666666666666677788776555
No 33
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.04 E-value=18 Score=26.90 Aligned_cols=49 Identities=4% Similarity=-0.033 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHcCC--CcEEEEec-CCCCCcccHHHHHHHHHhCCCcEEEECCC
Q 027097 65 MVEEKADKILSESQE--SNVAFLVV-GDPFGATTHTDLVVRAKKLGIQVKAVHNA 116 (228)
Q Consensus 65 ~~e~~~~~i~~~a~~--~~Va~l~~-GDP~~~~~~~~l~~~~~~~gi~v~viPGi 116 (228)
.+.+..+.|.+.+++ -++.+..+ +|+ .....+++.+...++.--|+-+.
T Consensus 14 f~~~~~~gi~~~~~~~gy~~~~~~~~~d~---~~~~~~~~~l~~~~vdgiIi~~~ 65 (282)
T d1dbqa_ 14 YFAEIIEAVEKNCFQKGYTLILGNAWNNL---EKQRAYLSMMAQKRVDGLLVMCS 65 (282)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCCCH---HHHHHHHHHHHhcCCCEEeeecc
Confidence 344555555555544 24444332 333 22345666777888888666433
Done!