Query 027103
Match_columns 228
No_of_seqs 207 out of 1616
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 04:59:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0224 Aquaporin (major intri 100.0 4.1E-36 8.8E-41 256.6 9.5 170 47-219 28-211 (316)
2 COG0580 GlpF Glycerol uptake f 100.0 3.9E-35 8.4E-40 247.5 14.9 174 49-224 3-183 (241)
3 PLN00184 aquaporin NIP1; Provi 100.0 3.9E-33 8.5E-38 243.5 19.2 170 47-221 50-222 (296)
4 KOG0223 Aquaporin (major intri 100.0 1.9E-33 4.1E-38 237.7 14.8 173 44-223 4-177 (238)
5 PTZ00016 aquaglyceroporin; Pro 100.0 1.6E-32 3.6E-37 239.9 19.0 169 47-219 46-227 (294)
6 PF00230 MIP: Major intrinsic 100.0 5.7E-33 1.2E-37 234.9 15.2 174 45-219 2-179 (227)
7 PLN00167 aquaporin TIP5; Provi 100.0 7.4E-31 1.6E-35 225.4 18.8 170 46-220 17-188 (256)
8 PLN00182 putative aquaporin NI 100.0 1.6E-30 3.5E-35 225.8 18.1 166 47-221 38-203 (283)
9 PRK05420 aquaporin Z; Provisio 100.0 2.7E-30 5.8E-35 219.2 17.3 168 51-222 2-176 (231)
10 PLN00026 aquaporin NIP; Provi 100.0 3.3E-30 7.1E-35 224.8 17.5 167 47-223 67-233 (298)
11 PLN00166 aquaporin TIP2; Provi 100.0 8.7E-30 1.9E-34 218.2 18.2 169 46-219 13-184 (250)
12 PLN00027 aquaporin TIP; Provis 100.0 1.1E-29 2.3E-34 218.1 17.6 169 46-219 15-186 (252)
13 PLN00183 putative aquaporin NI 100.0 3.1E-29 6.8E-34 216.9 17.3 197 17-223 10-207 (274)
14 cd00333 MIP Major intrinsic pr 100.0 8.2E-29 1.8E-33 210.0 15.5 165 52-219 1-174 (228)
15 TIGR00861 MIP MIP family chann 100.0 3.9E-28 8.4E-33 204.3 15.2 166 56-222 1-169 (216)
16 PLN00182 putative aquaporin NI 99.8 8.5E-21 1.8E-25 165.0 11.4 132 13-155 121-254 (283)
17 PLN00183 putative aquaporin NI 99.8 5.1E-20 1.1E-24 159.6 11.3 134 13-157 124-258 (274)
18 PLN00026 aquaporin NIP; Provi 99.8 5.5E-20 1.2E-24 160.7 9.9 134 14-157 151-284 (298)
19 KOG0223 Aquaporin (major intri 99.8 1.6E-20 3.5E-25 159.0 4.9 141 7-157 84-228 (238)
20 cd00333 MIP Major intrinsic pr 99.8 1.5E-19 3.3E-24 153.3 9.8 135 12-152 79-227 (228)
21 TIGR00861 MIP MIP family chann 99.8 1.1E-18 2.4E-23 146.8 10.1 131 13-149 80-215 (216)
22 PLN00184 aquaporin NIP1; Provi 99.8 8.1E-18 1.7E-22 147.3 12.4 135 13-157 133-275 (296)
23 PLN00166 aquaporin TIP2; Provi 99.7 1.4E-17 3E-22 142.9 11.9 138 13-157 102-239 (250)
24 PLN00027 aquaporin TIP; Provis 99.7 4.8E-17 1E-21 139.8 12.8 135 13-156 104-240 (252)
25 PRK05420 aquaporin Z; Provisio 99.7 1.8E-17 3.8E-22 140.8 9.9 137 12-157 81-230 (231)
26 PLN00167 aquaporin TIP5; Provi 99.7 1.7E-16 3.7E-21 136.6 9.4 136 12-157 105-242 (256)
27 PF00230 MIP: Major intrinsic 99.7 4.7E-16 1E-20 131.5 9.9 132 12-150 92-227 (227)
28 PTZ00016 aquaglyceroporin; Pro 99.7 5.5E-16 1.2E-20 135.9 10.0 139 12-157 128-292 (294)
29 COG0580 GlpF Glycerol uptake f 99.6 1E-15 2.2E-20 129.7 10.7 135 13-155 87-240 (241)
30 KOG0224 Aquaporin (major intri 98.9 2.1E-09 4.6E-14 92.9 5.2 137 14-157 113-277 (316)
31 COG2116 FocA Formate/nitrite f 87.6 18 0.0004 31.4 14.5 148 48-201 29-184 (265)
32 PRK10805 formate transporter; 86.7 18 0.00038 31.8 12.2 103 91-200 72-186 (285)
33 PF01226 Form_Nir_trans: Forma 68.1 78 0.0017 27.1 13.3 111 89-201 59-176 (250)
34 PRK10621 hypothetical protein; 63.7 48 0.001 28.4 8.2 29 125-153 73-101 (266)
35 PRK09713 focB putative formate 60.0 1.2E+02 0.0026 26.6 12.7 77 122-201 99-186 (282)
36 COG0730 Predicted permeases [G 55.1 95 0.0021 26.2 8.6 30 124-153 68-97 (258)
37 TIGR00790 fnt formate/nitrite 52.1 1.5E+02 0.0032 25.2 11.1 84 114-197 68-159 (239)
38 PRK11562 nitrite transporter N 50.0 1.7E+02 0.0038 25.4 10.5 105 91-198 62-173 (268)
39 PRK12446 undecaprenyldiphospho 49.9 5.5 0.00012 35.8 0.0 22 104-125 6-27 (352)
40 PF01925 TauE: Sulfite exporte 46.3 71 0.0015 26.4 6.3 26 126-151 60-85 (240)
41 PF03033 Glyco_transf_28: Glyc 45.4 4.7 0.0001 30.4 -1.0 20 108-127 7-26 (139)
42 PRK14218 camphor resistance pr 34.3 1.3E+02 0.0029 23.2 5.6 81 128-224 5-85 (133)
43 PF14034 Spore_YtrH: Sporulati 25.0 1.9E+02 0.004 21.5 4.7 47 110-156 53-101 (102)
44 PF02537 CRCB: CrcB-like prote 24.8 1.5E+02 0.0032 21.8 4.4 73 139-223 4-76 (117)
45 KOG3415 Putative Rab5-interact 24.3 29 0.00062 26.3 0.3 24 8-31 39-62 (129)
46 COG0707 MurG UDP-N-acetylgluco 23.4 37 0.0008 30.8 0.9 23 104-126 5-27 (357)
47 TIGR02587 putative integral me 22.7 5.2E+02 0.011 22.6 9.3 32 126-157 96-127 (271)
48 PRK14221 camphor resistance pr 22.6 2E+02 0.0043 21.9 4.7 72 138-224 10-81 (124)
49 PRK14213 camphor resistance pr 21.2 2E+02 0.0044 21.6 4.5 29 125-153 88-116 (118)
No 1
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=256.64 Aligned_cols=170 Identities=26% Similarity=0.387 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc
Q 027103 47 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 47 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~ 126 (228)
...+.|++++||+||++|+++++++++....++.. ..++..+.++||+++++.+|+.+++||||+|||||+++++.||
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~--~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGT--GGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCC--CCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 34689999999999999999999999887766432 3446677889999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCC--------------ccccCCCCchhHHHHHHHHHHHHHHHH
Q 027103 127 LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGG--------------ANVVAHGYTKGDGLGAEIIGTFVLVYT 192 (228)
Q Consensus 127 ~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g--------------~~~~~~~~s~~~~f~~E~~~T~~L~~~ 192 (228)
+||+|+++|+++|++||++|++.+|.+|++.. ....+| ++.|.|..+.+++|+.|+++|.+|+.+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i-~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLYYDAI-NEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998873 333322 234567899999999999999999999
Q ss_pred HHHhccCCCCCCCCCCceeehHHHHhh
Q 027103 193 VFSATDAKRNARDSHVPVSILSPCHSL 219 (228)
Q Consensus 193 il~~~~~~~~~~~~~~p~~~g~~i~~~ 219 (228)
+++++|++|+.+.++.|+++|++|..+
T Consensus 185 l~aI~D~rN~~p~g~~p~~iG~lv~~I 211 (316)
T KOG0224|consen 185 LFAITDKRNPIPTGLHPLVIGILVVAI 211 (316)
T ss_pred eeEEecCCCCCCcchhHHHHHHHHHHH
Confidence 999999999888899999999998855
No 2
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=247.51 Aligned_cols=174 Identities=30% Similarity=0.450 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccc
Q 027103 49 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLS 128 (228)
Q Consensus 49 ~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~ 128 (228)
+..|++++||+||++|++++++++......+.++...++..++++||+++++.+|+++++||+|+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 45678899999999999999999998887766666777888999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcC------CCccccCCC-CchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 129 LTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLG------GGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 129 ~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~------~g~~~~~~~-~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
|++++.||++|++|+++|+.++|.++++. +...+ .+...+.|+ .+..++|+.|+++||+|+++|++++|++|
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~-~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGK-ILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999887 33333 233334444 47899999999999999999999987666
Q ss_pred CCCCCCCceeehHHHHhhhhccc
Q 027103 202 NARDSHVPVSILSPCHSLSSFLR 224 (228)
Q Consensus 202 ~~~~~~~p~~~g~~i~~~~~f~~ 224 (228)
. +.+..|+++|+.|..+.+..+
T Consensus 162 ~-~~~~apl~iGllv~~i~~s~g 183 (241)
T COG0580 162 A-NAGFAPLAIGLLVTAIGLSLG 183 (241)
T ss_pred c-cccchHHHHHHHHHHHHHHhc
Confidence 5 445899999999997654444
No 3
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=3.9e-33 Score=243.48 Aligned_cols=170 Identities=24% Similarity=0.309 Sum_probs=136.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc
Q 027103 47 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 47 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~ 126 (228)
.++++|++++||+|||+|+|++++++...... ....+++.++++||+++++.+++++++||+|+|||||+++++.++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~---~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~ 126 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQN---DNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR 126 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccC---CCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC
Confidence 45789999999999999999999877543221 112356778999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCC---ccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 127 LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGG---ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 127 ~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g---~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
++|.++++||++|++|+++|+++++.+++... +..... .....+..+.+++|+.|+++|++|+++++++.++++.
T Consensus 127 ~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~-~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~- 204 (296)
T PLN00184 127 FPLKQVPAYVISQVIGSTLAAATLRLLFGLDH-DVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA- 204 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-hccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcC-
Confidence 99999999999999999999999999886542 111111 1123344688999999999999999999998665443
Q ss_pred CCCCCceeehHHHHhhhh
Q 027103 204 RDSHVPVSILSPCHSLSS 221 (228)
Q Consensus 204 ~~~~~p~~~g~~i~~~~~ 221 (228)
.....|+.+|+++.++..
T Consensus 205 ~~~~~~l~IG~~v~~~~~ 222 (296)
T PLN00184 205 IGELAGLAIGSTVLLNVL 222 (296)
T ss_pred CCcchHHHHHHHHHHHHH
Confidence 334678888888886543
No 4
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-33 Score=237.72 Aligned_cols=173 Identities=46% Similarity=0.632 Sum_probs=149.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 44 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 44 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
+.+.++.+|++++||++|++++|++++++..... .....+.+.+++++|+.+++.+++++++||||+|||||+++++
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~---~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK---YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAV 80 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHH
Confidence 4466789999999999999999999998876654 2234567889999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHH-hccCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRN 202 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~-~~~~~~~ 202 (228)
.|++++.+++.||++|++|+++|+.+.+.+.+.+ +...+.+.+.+.++.+.+|+++.|++.||.|++++++ .+|+||+
T Consensus 81 ~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 81 GGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQ-YNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred hCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcc-cccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 9999999999999999999999999999999875 3333445677889999999999999999999999999 8887775
Q ss_pred CCCCCCceeehHHHHhhhhcc
Q 027103 203 ARDSHVPVSILSPCHSLSSFL 223 (228)
Q Consensus 203 ~~~~~~p~~~g~~i~~~~~f~ 223 (228)
.+.|+.+|+++....+.+
T Consensus 160 ---~~a~l~IG~~v~~~~l~~ 177 (238)
T KOG0223|consen 160 ---ELAPLAIGFSVGLNILAA 177 (238)
T ss_pred ---ccHHHHHHHHHHHHHHee
Confidence 677888888888444333
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=1.6e-32 Score=239.93 Aligned_cols=169 Identities=26% Similarity=0.297 Sum_probs=140.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc
Q 027103 47 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 47 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~ 126 (228)
.++++|++++||+||++++|++++++......+ ...+.+.+++++|+++++.+++++++||+|+|||||+++++.++
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~ 122 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK 122 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc
Confidence 367889999999999999999998876533221 12345678899999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCC-------------CccccCCCCchhHHHHHHHHHHHHHHHHH
Q 027103 127 LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-------------GANVVAHGYTKGDGLGAEIIGTFVLVYTV 193 (228)
Q Consensus 127 ~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~-------------g~~~~~~~~s~~~~f~~E~~~T~~L~~~i 193 (228)
++|.+.+.||++|++|+++|+++.|.++++. ++..+. +...+.|+.+..++|+.|+++|++|++++
T Consensus 123 i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~i 201 (294)
T PTZ00016 123 FPWKKLPGYFVAQLLGAFVGAACVYGLYYGF-FKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVI 201 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998764 222111 12233457788999999999999999999
Q ss_pred HHhccCCCCCCCCCCceeehHHHHhh
Q 027103 194 FSATDAKRNARDSHVPVSILSPCHSL 219 (228)
Q Consensus 194 l~~~~~~~~~~~~~~p~~~g~~i~~~ 219 (228)
++++|++|+..++..|+.+|+++..+
T Consensus 202 la~~d~~~~~~~~~~pl~IGl~v~~i 227 (294)
T PTZ00016 202 LAITDPNNCPAFNYLPVAVGLLVFVI 227 (294)
T ss_pred HHhccCccCCCcCcccHHHHHHHHHH
Confidence 99999887665667899999888744
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=5.7e-33 Score=234.90 Aligned_cols=174 Identities=33% Similarity=0.473 Sum_probs=145.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC---CCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHH
Q 027103 45 LKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTK---CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL 121 (228)
Q Consensus 45 ~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~ 121 (228)
.++++++|++++||+||++++|+++++.........+ ....+...+++++|+.+++.+++++++||+|+|||||++.
T Consensus 2 ~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~ 81 (227)
T PF00230_consen 2 LKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAF 81 (227)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhhe
Confidence 4678899999999999999999999866643332221 1123567788999999999999999999999999999999
Q ss_pred HHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 122 LLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 122 ~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
++.|+++|.+.+.|+++|++|+++|+++.+.++++. ........+.+.++.+..++|+.|+++|++|+++++...|++|
T Consensus 82 ~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 82 ALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDS-NSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH-HTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeecccceeeEEeeccccccccccchhhcccCc-ccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 999999999999999999999999999999998775 2233344566788899999999999999999999999999988
Q ss_pred CCC-CCCCceeehHHHHhh
Q 027103 202 NAR-DSHVPVSILSPCHSL 219 (228)
Q Consensus 202 ~~~-~~~~p~~~g~~i~~~ 219 (228)
+.+ ++..|+.+|+.++++
T Consensus 161 ~~~~~~~~p~~ig~~v~~~ 179 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGAL 179 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeec
Confidence 776 345788888888744
No 7
>PLN00167 aquaporin TIP5; Provisional
Probab=99.97 E-value=7.4e-31 Score=225.42 Aligned_cols=170 Identities=29% Similarity=0.373 Sum_probs=139.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcccc--CCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 46 KSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 46 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
..++.+|++++||+||++++|+++++...... .++.....+++.+++++|+++++.+++++++||+|+|||||+++++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 45678999999999999999999998764321 1111223356778999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
.++++|.+++.||++|++|+++|+++++.++++.... .+...++.+.+++++.|+++|++|+++++.++|+|++.
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~ 171 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVP-----TYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGL 171 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccccc-----ccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 9999999999999999999999999999887653211 11223455778999999999999999999999887755
Q ss_pred CCCCCceeehHHHHhhh
Q 027103 204 RDSHVPVSILSPCHSLS 220 (228)
Q Consensus 204 ~~~~~p~~~g~~i~~~~ 220 (228)
.++..|+.+|+++..+.
T Consensus 172 ~~~~~pl~iGl~v~~~~ 188 (256)
T PLN00167 172 LGAIGPLAIGLVAGANV 188 (256)
T ss_pred CCCcchHHHHHHHHHHH
Confidence 55578889999888553
No 8
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.97 E-value=1.6e-30 Score=225.78 Aligned_cols=166 Identities=20% Similarity=0.263 Sum_probs=134.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc
Q 027103 47 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 47 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~ 126 (228)
.++++|++++|++|||+|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||+++++.++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 457889999999999999999998776433211 12345678889999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 027103 127 LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDS 206 (228)
Q Consensus 127 ~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~ 206 (228)
++|.+++.||++|++|+++|+++++.+++.. ..+.+...|+.+.+++++.|+++|++|+++++++.++++. .+.
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~-----~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~-~~~ 188 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVT-----PEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA-VGE 188 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc-CCc
Confidence 9999999999999999999999999988542 1122233456688999999999999999999987655443 334
Q ss_pred CCceeehHHHHhhhh
Q 027103 207 HVPVSILSPCHSLSS 221 (228)
Q Consensus 207 ~~p~~~g~~i~~~~~ 221 (228)
..|+.+|+++.++..
T Consensus 189 ~~~l~iGl~V~~~~~ 203 (283)
T PLN00182 189 LAGIAVGMTIILNVF 203 (283)
T ss_pred chhHHHHHHHHHHHH
Confidence 567778887775543
No 9
>PRK05420 aquaporin Z; Provisional
Probab=99.97 E-value=2.7e-30 Score=219.23 Aligned_cols=168 Identities=25% Similarity=0.415 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchh
Q 027103 51 YRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLT 130 (228)
Q Consensus 51 ~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~ 130 (228)
+|++++||+||++|+|++++++......+ ..+.+.+.+++++|+++++.+++++++||+|+|||||+++++.|+++|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 68999999999999999998764322111 1223456679999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhhcCCcc-hhhcC-----CCccccC-CCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 131 RAVFYMVMQCLGAVCGAGVVKGFEGSKN-YERLG-----GGANVVA-HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 131 ~~~~yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~-----~g~~~~~-~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
+.+.||++|++|+++|+.+.+.++++.. ++..+ .+..... .+.+..++++.|+++|++|+++++...|+|+
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~-- 157 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRA-- 157 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCC--
Confidence 9999999999999999999998876531 11111 0111111 2457899999999999999999999998764
Q ss_pred CCCCCceeehHHHHhhhhc
Q 027103 204 RDSHVPVSILSPCHSLSSF 222 (228)
Q Consensus 204 ~~~~~p~~~g~~i~~~~~f 222 (228)
..+..|+.+|+++..+...
T Consensus 158 ~~~~~p~~iGl~v~~~~~~ 176 (231)
T PRK05420 158 PAGFAPIAIGLALTLIHLI 176 (231)
T ss_pred CCcchHHHHHHHHHHHHHH
Confidence 3447789999988865433
No 10
>PLN00026 aquaporin NIP; Provisional
Probab=99.97 E-value=3.3e-30 Score=224.83 Aligned_cols=167 Identities=21% Similarity=0.291 Sum_probs=133.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc
Q 027103 47 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 47 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~ 126 (228)
..+.+|++++||+|||+|+|+++++....... ....+++.+++++|+++++.+++++++||||+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~---~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY---DGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 45688999999999999999998754432111 112346667899999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 027103 127 LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDS 206 (228)
Q Consensus 127 ~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~ 206 (228)
++|.++|.||++|++|+++|+++++.++++. . ..+.+ .|+.+.+++|+.|+++|++|+++++++.+++++ .+.
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~-~---~~g~t--~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~-~~~ 216 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHPF-M---SGGVT--VPSVSTGQAFALEFIITFNLLFVVTAVATDTRA-VGE 216 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c---cCcee--eecccHHHHHHHHHHHHHHHHHhheeeecCCCC-cCC
Confidence 9999999999999999999999999998753 1 12222 356789999999999999999999987554443 334
Q ss_pred CCceeehHHHHhhhhcc
Q 027103 207 HVPVSILSPCHSLSSFL 223 (228)
Q Consensus 207 ~~p~~~g~~i~~~~~f~ 223 (228)
..|+.+|+++.......
T Consensus 217 ~~~l~iGl~V~~~~l~~ 233 (298)
T PLN00026 217 LAGIAVGATVMLNILVA 233 (298)
T ss_pred ccchHHHHHHHHHHHHh
Confidence 57788888887554433
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=99.97 E-value=8.7e-30 Score=218.21 Aligned_cols=169 Identities=28% Similarity=0.442 Sum_probs=136.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCC-CCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 46 KSWSFYRAGIAEFMATFLFLYITVLTVMGV-SKSNTK-CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 46 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
..++.+|++++|++||++|+|++++++... ...+.+ ....+.+.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 456788999999999999999999987652 111111 112345668899999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
.++++|.+.++||++|++|+++|+.+++.+++++.. ......++.+..++++.|+++|++|+++++...+++|+.
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~ 167 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESV-----PTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKG 167 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----cccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999999988754311 112234567889999999999999999999976655532
Q ss_pred -CCCCCceeehHHHHhh
Q 027103 204 -RDSHVPVSILSPCHSL 219 (228)
Q Consensus 204 -~~~~~p~~~g~~i~~~ 219 (228)
.+...|+.+|+.+..+
T Consensus 168 ~~~~~~p~~iGl~v~~~ 184 (250)
T PLN00166 168 SLGTIAPIAIGFIVGAN 184 (250)
T ss_pred ccccchhHHHHHHHHHH
Confidence 3457889999888754
No 12
>PLN00027 aquaporin TIP; Provisional
Probab=99.97 E-value=1.1e-29 Score=218.09 Aligned_cols=169 Identities=30% Similarity=0.433 Sum_probs=135.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-C-CCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 46 KSWSFYRAGIAEFMATFLFLYITVLTVMGVSK-S-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 46 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
..++.+|++++|++||++|++++++++..... . +.+....+.+.+++++|+++++.+++++++||+|+|||||+++++
T Consensus 15 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~ 94 (252)
T PLN00027 15 SHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFI 94 (252)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHH
Confidence 34678999999999999999999988654221 1 111112345678999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhc-cCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRN 202 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~-~~~~~ 202 (228)
.++++|.+.+.||++|++|+++|+++++.+.++.. .+.....++.+.+++++.|+++||+|+++++.+. |+|+.
T Consensus 95 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~ 169 (252)
T PLN00027 95 GGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE-----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKG 169 (252)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 99999999999999999999999999987765431 1233445678899999999999999999999875 55543
Q ss_pred CCCCCCceeehHHHHhh
Q 027103 203 ARDSHVPVSILSPCHSL 219 (228)
Q Consensus 203 ~~~~~~p~~~g~~i~~~ 219 (228)
...+..|+.+|+.+..+
T Consensus 170 ~~~~~~p~~iGl~v~~~ 186 (252)
T PLN00027 170 DLGIIAPIAIGFIVGAN 186 (252)
T ss_pred CccchHHHHHHHHHHHH
Confidence 33457788888888754
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.97 E-value=3.1e-29 Score=216.95 Aligned_cols=197 Identities=20% Similarity=0.234 Sum_probs=147.6
Q ss_pred HHHhhHHHHhhcccccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHH
Q 027103 17 ERQPIGTSAQSDKDYKEPPPAPLFEPGEL-KSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFG 95 (228)
Q Consensus 17 ~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 95 (228)
+-|..|........-..|.+++.++.-+- -..+.+|++++|+++||+++|++++++....... ...+.+.+++++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---~~~~~~~~al~~G 86 (274)
T PLN00183 10 VDQEAGSTASTLNGDDHPKRQRLFGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---GEVGLLEYAATAG 86 (274)
T ss_pred hhhhhcCCCCcccCCCCchhhhhccccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CccchHHHHHHHH
Confidence 34555555533333333444454443322 2456789999999999999999998765432211 1234566789999
Q ss_pred HHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCch
Q 027103 96 GMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTK 175 (228)
Q Consensus 96 ~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~ 175 (228)
+++++.+++++++||+|+|||||+++++.++++|.++|+||++|++|+++|+++++.+++... +.....|..+.
T Consensus 87 l~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~------~~~~~~p~~~~ 160 (274)
T PLN00183 87 LTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA------DLMTTKPAQGC 160 (274)
T ss_pred HHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------ccccCCCcccH
Confidence 999999999999999999999999999999999999999999999999999999988876431 12223355567
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCceeehHHHHhhhhcc
Q 027103 176 GDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPVSILSPCHSLSSFL 223 (228)
Q Consensus 176 ~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~~~p~~~g~~i~~~~~f~ 223 (228)
+++++.|+++|++|++.++.+.+++++ .....|+.+|+.+.......
T Consensus 161 ~~~~~~E~v~T~iLv~~i~~~~~~~~~-~~~~~~l~iGl~v~~~v~~~ 207 (274)
T PLN00183 161 SSAFWVEFIATFIVMFLAASLTSQPQS-LGHLSGFVIGIAIGLAVLIT 207 (274)
T ss_pred HHHHHHHHHHHHHHHHhhheeeccccC-CCCceehHHHHHHHHHHHhc
Confidence 899999999999999999998876643 23356888888888554333
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.96 E-value=8.2e-29 Score=209.96 Aligned_cols=165 Identities=36% Similarity=0.586 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhh
Q 027103 52 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTR 131 (228)
Q Consensus 52 ~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~ 131 (228)
|++++|++||++++++++++.......++ ...+.+.+++++|+.+.+.+++++++||+|+|||+|+++++.++++|.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 56899999999999999998765443221 1234566799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCc--------cccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC-
Q 027103 132 AVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGA--------NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRN- 202 (228)
Q Consensus 132 ~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~--------~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~- 202 (228)
.++||++|++|+++|+.+.+.++++. ++..+... +.+.++.+.+++++.|+++|++|++.++...++++.
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~ 157 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGL-YLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGP 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHH-HhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccC
Confidence 99999999999999999999998776 33222211 334567789999999999999999999999887664
Q ss_pred CCCCCCceeehHHHHhh
Q 027103 203 ARDSHVPVSILSPCHSL 219 (228)
Q Consensus 203 ~~~~~~p~~~g~~i~~~ 219 (228)
.+....|+.+|+.+.++
T Consensus 158 ~~~~~~~~~iGl~v~~~ 174 (228)
T cd00333 158 PPGGLAPLAIGLLVAAI 174 (228)
T ss_pred CCCCcHHHHHHHHHHHH
Confidence 23446677888877754
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.96 E-value=3.9e-28 Score=204.26 Aligned_cols=166 Identities=34% Similarity=0.553 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCC-CC-CccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHH
Q 027103 56 AEFMATFLFLYITVLTVMGVSKSNT-KC-STVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAV 133 (228)
Q Consensus 56 aE~igT~~lv~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~ 133 (228)
+||+||++++++++++.......+. +. ...+...+++++|++++..+++++++||+|+|||||+++++.++++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 5999999999999998776333221 11 111466789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCC-CCCceee
Q 027103 134 FYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARD-SHVPVSI 212 (228)
Q Consensus 134 ~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~-~~~p~~~ 212 (228)
.||++|++|+++|+.+.+.++++. ++......+...++.+.+++++.|+++|++|+++++...+++++... ...|+.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~i 159 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGL-FPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAI 159 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc-ccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHH
Confidence 999999999999999999988765 21111112223456788999999999999999999998887655332 3678888
Q ss_pred hHHHHhhhhc
Q 027103 213 LSPCHSLSSF 222 (228)
Q Consensus 213 g~~i~~~~~f 222 (228)
|+.+..+...
T Consensus 160 G~~v~~~~~~ 169 (216)
T TIGR00861 160 GLLVFLIHLS 169 (216)
T ss_pred HHHHHHHHHh
Confidence 8887755433
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.84 E-value=8.5e-21 Score=165.04 Aligned_cols=132 Identities=20% Similarity=0.204 Sum_probs=99.7
Q ss_pred cchhHHHhhHHHHhhccccc--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhH
Q 027103 13 NKFSERQPIGTSAQSDKDYK--EPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGI 90 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (228)
..|+++|++|++++....+. ........... ...+.++++++|+++|++|++++++..... . .. .. ..
T Consensus 121 ~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~-~--~~---~~--~~ 190 (283)
T PLN00182 121 PLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTT--PTDSSGQALVAEIIISFLLMFVISGVATDS-R--AV---GE--LA 190 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccceeeCC--CCcchHHHHHHHHHHHHHHHHHHHhheecc-c--cC---Cc--ch
Confidence 46999999999996542221 11111111111 123578999999999999999987654321 1 11 11 24
Q ss_pred HHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcC
Q 027103 91 AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG 155 (228)
Q Consensus 91 ~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~ 155 (228)
++++|+.+++.+++.+++||+|+|||||+++++.++ .|.++|+||++|++|+++|+++++.+..
T Consensus 191 ~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 191 GIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred hHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999999865 5899999999999999999999998864
No 17
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.82 E-value=5.1e-20 Score=159.58 Aligned_cols=134 Identities=20% Similarity=0.242 Sum_probs=100.4
Q ss_pred cchhHHHhhHHHHhhcccccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHH
Q 027103 13 NKFSERQPIGTSAQSDKDYKEPPPAP-LFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIA 91 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (228)
..|+++|++|++++....+......+ .....+ ..+.++++++|+++|+++++.+++...... .. +. ..+
T Consensus 124 ~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~p--~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~---~~----~~-~~~ 193 (274)
T PLN00183 124 PLYITAQTVGSVLATYVGVSVYGVKADLMTTKP--AQGCSSAFWVEFIATFIVMFLAASLTSQPQ---SL----GH-LSG 193 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCC--cccHHHHHHHHHHHHHHHHHhhheeecccc---CC----CC-cee
Confidence 47999999999996543211111111 111111 124689999999999999999876543211 11 11 136
Q ss_pred HHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 92 WAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 92 ~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
+.+|+.+++.+++.+++||+|+|||||+++++.+ .+|.++|+||++|++|+++|+++++.++.+.
T Consensus 194 l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 194 FVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred hHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 7899999999999999999999999999999986 5899999999999999999999999987655
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.82 E-value=5.5e-20 Score=160.69 Aligned_cols=134 Identities=21% Similarity=0.201 Sum_probs=99.2
Q ss_pred chhHHHhhHHHHhhcccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHH
Q 027103 14 KFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWA 93 (228)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (228)
-|+++|++|+++++...+...++....... ....+.+++++.|+++|++|++++++.... .. .. .. ..+++
T Consensus 151 ~YiiaQilGAi~aa~~~~~~~~~~~~~g~t-~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~-~~--~~---~~--~~~l~ 221 (298)
T PLN00026 151 AYIAAQVSASICASFALKGVFHPFMSGGVT-VPSVSTGQAFALEFIITFNLLFVVTAVATD-TR--AV---GE--LAGIA 221 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCcee-eecccHHHHHHHHHHHHHHHHHhheeeecC-CC--Cc---CC--ccchH
Confidence 699999999999655332211110000001 113467899999999999999988743211 11 11 11 14688
Q ss_pred HHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 94 FGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 94 ~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
+|+.+++.+++.+++||+|+|||||+++++..+ +|.++|+||++|++|+++|+++++.+.-.+
T Consensus 222 iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~wVy~vaPilGAilga~ly~~~~~~~ 284 (298)
T PLN00026 222 VGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAIWIYLVAPTLGALAGAGTYTAVKLRE 284 (298)
T ss_pred HHHHHHHHHHHhcccCccccChHHHHHHHHhcC-CchheeHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999876 799999999999999999999988775433
No 19
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.81 E-value=1.6e-20 Score=159.01 Aligned_cols=141 Identities=19% Similarity=0.140 Sum_probs=111.1
Q ss_pred cccccccchhHHHhhHHHHhhcccccCCCCC----CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 027103 7 DVKLGANKFSERQPIGTSAQSDKDYKEPPPA----PLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKC 82 (228)
Q Consensus 7 ~~~~~~~~Y~~aQ~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~ 82 (228)
+....+.-|+++|++|++++....+...+.+ ...........+.+|.++.|++.||.+++..++...+..++
T Consensus 84 isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---- 159 (238)
T KOG0223|consen 84 ISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---- 159 (238)
T ss_pred CcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc----
Confidence 6667788999999999999666544443332 11112223345678999999999999999876533221111
Q ss_pred CccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 83 STVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 83 ~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
...++.+|+++.+.+++.+++||++||||||+++++..+. |..+|+||++|++|+++++++++.++.++
T Consensus 160 -----~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 160 -----ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred -----ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 2358999999999999999999999999999999998774 99999999999999999999999888665
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.80 E-value=1.5e-19 Score=153.25 Aligned_cols=135 Identities=23% Similarity=0.166 Sum_probs=100.5
Q ss_pred ccchhHHHhhHHHHhhcccc-------cCCCCCCC-----CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 027103 12 ANKFSERQPIGTSAQSDKDY-------KEPPPAPL-----FEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSN 79 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~ 79 (228)
...|+++|++|++++....+ .+....+. .........+.+|+++.|+++|+++++.++........
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~-- 156 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNG-- 156 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccccc--
Confidence 44799999999999543211 11111100 01122334578999999999999999999876432111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhcc--chhhHHHHHHHHhhhHHHHHHHHHh
Q 027103 80 TKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKL--SLTRAVFYMVMQCLGAVCGAGVVKG 152 (228)
Q Consensus 80 ~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~--~~~~~~~yi~aQ~lGa~~ga~l~~~ 152 (228)
.......++.+|+.+...+++.+++||+|+||||++++++.++. +|.+.|+||++|++|+++|+++++.
T Consensus 157 ----~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 157 ----PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ----CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 01122358899999999999999999999999999999999988 7999999999999999999988664
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.78 E-value=1.1e-18 Score=146.84 Aligned_cols=131 Identities=21% Similarity=0.183 Sum_probs=95.8
Q ss_pred cchhHHHhhHHHHhhccccc--CCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 13 NKFSERQPIGTSAQSDKDYK--EPP--PAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
-.|+++|++|++++....+. .+. .+...........+.++.++.|+++|+++++.++..... +++.. .+ .
T Consensus 80 ~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~~~~---~~-~ 153 (216)
T TIGR00861 80 PVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDP--RNRVP---RG-G 153 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecC--CCCCC---CC-c
Confidence 47999999999995442111 111 010001111123467999999999999999988765432 11111 11 1
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhh-ccchhhHHHHHHHHhhhHHHHHHH
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLAR-KLSLTRAVFYMVMQCLGAVCGAGV 149 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g-~~~~~~~~~yi~aQ~lGa~~ga~l 149 (228)
..++.+|+.++..+++.+++||+|+||||++++++.+ +.+|.+.|+||++|++|+++|+.+
T Consensus 154 ~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 154 FAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred cHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999999976 478999999999999999999875
No 22
>PLN00184 aquaporin NIP1; Provisional
Probab=99.75 E-value=8.1e-18 Score=147.27 Aligned_cols=135 Identities=21% Similarity=0.241 Sum_probs=98.9
Q ss_pred cchhHHHhhHHHHhhccccc---CCCC---CC--CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCc
Q 027103 13 NKFSERQPIGTSAQSDKDYK---EPPP---AP--LFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCST 84 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~---~~~~---~~--~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~ 84 (228)
..|+++|++|++++....+. .... .. ..... ....+.+++++.|+++|++|++++++...... . .
T Consensus 133 ~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t-~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~----~--~ 205 (296)
T PLN00184 133 PAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGS-SPVGSDLQAFVMEFIVTFYLMFIISGVATDNR----A--I 205 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeecc-CcCCcHHHHHHHHHHHHHHHHHHHHheeccCc----C--C
Confidence 36999999999996542211 1000 00 00001 11236789999999999999999876533211 1 0
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 85 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 85 ~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
+ ...++.+|+.+++.+++.+++||+++||||++++++... .|.++|+||++|++|+++|+++++.+...+
T Consensus 206 -~-~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~~~~~WVy~vgPilGa~laal~y~~l~~~~ 275 (296)
T PLN00184 206 -G-ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRYTD 275 (296)
T ss_pred -C-cchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-cccccchHHhHHHHHHHHHHHHHHHHhcCC
Confidence 1 124788999999999999999999999999999999755 578999999999999999999988886533
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.74 E-value=1.4e-17 Score=142.89 Aligned_cols=138 Identities=16% Similarity=0.106 Sum_probs=100.8
Q ss_pred cchhHHHhhHHHHhhcccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHH
Q 027103 13 NKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAW 92 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (228)
-.|+++|++|++++....+...+.+...........+.+|.++.|+++|+++++..+....... +.. .....++
T Consensus 102 ~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~--~~~----~~~~~p~ 175 (250)
T PLN00166 102 FFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPK--KGS----LGTIAPI 175 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccc--ccc----cccchhH
Confidence 3799999999999555332221111110001112346789999999999999999876532111 100 0112478
Q ss_pred HHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 93 AFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 93 ~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
.+|+.++..++..++.||+.+||||++++++..+ .|.++|+||++|++|+++|+++++.++.+.
T Consensus 176 ~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~ 239 (250)
T PLN00166 176 AIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239 (250)
T ss_pred HHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcccchhhHHHHHHHHHHHHHHHHHhccc
Confidence 8999999999999999999999999999999865 589999999999999999999987776544
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.73 E-value=4.8e-17 Score=139.81 Aligned_cols=135 Identities=19% Similarity=0.137 Sum_probs=100.0
Q ss_pred cchhHHHhhHHHHhhcccccCCCC--CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhH
Q 027103 13 NKFSERQPIGTSAQSDKDYKEPPP--APLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGI 90 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (228)
-.|+++|++|++++....+...+. ....... ...+.++.++.|+++|+++++.++........ .. . + ...
T Consensus 104 ~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~--~~--~-~-~~~ 175 (252)
T PLN00027 104 ILYWIAQLLGSVVACLLLKFSTGGLETSAFSLS--SGVGVWNAFVFEIVMTFGLVYTVYATAVDPKK--GD--L-G-IIA 175 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccCC--CCccHHHHHHHHHHHHHHHHHHHHHhcccccc--CC--c-c-chH
Confidence 479999999999965432211111 1111111 23467899999999999999988654322111 11 0 1 135
Q ss_pred HHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCC
Q 027103 91 AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGS 156 (228)
Q Consensus 91 ~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~ 156 (228)
++.+|+.+...+++.++.||+.+||||++++++... .|.++|+||++|++|+++|+++++.++.+
T Consensus 176 p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 176 PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 788999999999999999999999999999999865 58999999999999999999999888743
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.73 E-value=1.8e-17 Score=140.82 Aligned_cols=137 Identities=17% Similarity=0.197 Sum_probs=99.4
Q ss_pred ccchhHHHhhHHHHhhcccc--cCCCCCC------C----CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 027103 12 ANKFSERQPIGTSAQSDKDY--KEPPPAP------L----FEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSN 79 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~--~~~~~~~------~----~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~ 79 (228)
...|+++|++|++++....+ ..++.+. . .....+...+..+.++.|+++|++|++..+..... + +
T Consensus 81 ~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~--~-~ 157 (231)
T PRK05420 81 LVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDK--R-A 157 (231)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCC--C-C
Confidence 34799999999999663222 1111000 0 00111223467899999999999999988765321 1 1
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc-cchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 80 TKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK-LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 80 ~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~-~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
. .+ ..++.+|+.+....++.++.||+.+||||++++++..+ ..+..+|+||++|++|+++++++++.++.++
T Consensus 158 -~---~~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 158 -P---AG--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred -C---Cc--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 1 11 24788999999999999999999999999999999753 3456899999999999999999988876554
No 26
>PLN00167 aquaporin TIP5; Provisional
Probab=99.67 E-value=1.7e-16 Score=136.58 Aligned_cols=136 Identities=18% Similarity=0.131 Sum_probs=99.3
Q ss_pred ccchhHHHhhHHHHhhcccccCCCC--CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhh
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPP--APLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQG 89 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 89 (228)
+..|+++|++|++++....+...+. .+..... ...+.++.++.|+++|+++++..+.... ... .... ..
T Consensus 105 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~E~i~T~~L~~~i~~~~~--~~~-~~~~----~~ 175 (256)
T PLN00167 105 AMFYWISQMLASVMACLFLKVTTVGQHVPTYKIA--EEMTGFGASVLEGVLTFGLVYTVYAAGD--PRR-GLLG----AI 175 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhccccccccccC--cccchHHHHHHHHHHHHHHHHHHHHhcc--ccc-cCCC----Cc
Confidence 4579999999999955422211111 1111111 1235678999999999999998765321 111 1101 12
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 90 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 90 ~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
.++.+|+.++...+..++.||+.+||||++++++..+ +|..+|.||++|++|++++++++..++.+.
T Consensus 176 ~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 176 GPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred chHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 4788899999999999999999999999999999864 588899999999999999999999888655
No 27
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.66 E-value=4.7e-16 Score=131.47 Aligned_cols=132 Identities=23% Similarity=0.213 Sum_probs=95.7
Q ss_pred ccchhHHHhhHHHHhhcccccC--C--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccch
Q 027103 12 ANKFSERQPIGTSAQSDKDYKE--P--PPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGI 87 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~ 87 (228)
+..|+++|++|+.++....+.. + ..............+.++.++.|+++|+++++............ .. +.
T Consensus 92 ~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~----~~-~~ 166 (227)
T PF00230_consen 92 AIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKF----PL-GP 166 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS----TS-SG
T ss_pred eeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccc----cc-cc
Confidence 3469999999999965532211 1 11111222223345679999999999999999887654322111 11 11
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHH
Q 027103 88 QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV 150 (228)
Q Consensus 88 ~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~ 150 (228)
..++.+|+.+....+..++.||+.+||||++++.+.... |.+.|+||++|++|+++|++++
T Consensus 167 -~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 167 -LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp -GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred -ccceeEEEEEeecccccccccccccCchhhcCceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 247888999988889899999999999999999998775 9999999999999999999864
No 28
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.65 E-value=5.5e-16 Score=135.89 Aligned_cols=139 Identities=17% Similarity=0.123 Sum_probs=97.3
Q ss_pred ccchhHHHhhHHHHhhcccccC--C-----CC---------CCCCCC-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027103 12 ANKFSERQPIGTSAQSDKDYKE--P-----PP---------APLFEP-GELKSWSFYRAGIAEFMATFLFLYITVLTVMG 74 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~--~-----~~---------~~~~~~-~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~ 74 (228)
...|+++|++|+++++...+.. + .. ...... ......+.++.++.|+++|++|+++++.....
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~ 207 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITDP 207 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3469999999999955432211 0 00 000000 00113467899999999999999988765321
Q ss_pred cccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhh-----ccchh----hHHHHHHHHhhhHHH
Q 027103 75 VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLAR-----KLSLT----RAVFYMVMQCLGAVC 145 (228)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g-----~~~~~----~~~~yi~aQ~lGa~~ 145 (228)
++. . ..+ ..++.+|+.+.+..++.++.||+.+||||++++++.. +..|. ++|+||++|++|+++
T Consensus 208 --~~~-~--~~~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~ 280 (294)
T PTZ00016 208 --NNC-P--AFN--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVL 280 (294)
T ss_pred --ccC-C--CcC--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHH
Confidence 111 1 011 2477899989888999999999999999999999974 23454 589999999999999
Q ss_pred HHHHHHhhcCCc
Q 027103 146 GAGVVKGFEGSK 157 (228)
Q Consensus 146 ga~l~~~~~~~~ 157 (228)
|+++++.+.+++
T Consensus 281 aally~~ll~~~ 292 (294)
T PTZ00016 281 GMFLYDKFIPPL 292 (294)
T ss_pred HHHHHHHHhCCC
Confidence 999998887654
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1e-15 Score=129.67 Aligned_cols=135 Identities=22% Similarity=0.209 Sum_probs=98.1
Q ss_pred cchhHHHhhHHHHhhcccc----------c-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 027103 13 NKFSERQPIGTSAQSDKDY----------K-EPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTK 81 (228)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~ 81 (228)
..|+++|++|++++....+ . ++..........+...+.++.++.|+++||+|++.+.+.......
T Consensus 87 ~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~---- 162 (241)
T COG0580 87 LPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA---- 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc----
Confidence 4799999999999553211 1 111112222233344578999999999999999998764431110
Q ss_pred CCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhcc----ch----hhHHHHHHHHhhhHHHHHHHHHhh
Q 027103 82 CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKL----SL----TRAVFYMVMQCLGAVCGAGVVKGF 153 (228)
Q Consensus 82 ~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~----~~----~~~~~yi~aQ~lGa~~ga~l~~~~ 153 (228)
+.+ ..++.+|+.++....+.++.||..+||||++++.+.... +- .+.|+||++|++|+++|+++++.+
T Consensus 163 --~~~--~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~ 238 (241)
T COG0580 163 --NAG--FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLL 238 (241)
T ss_pred --ccc--chHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHH
Confidence 111 248899999999999999999999999999999994321 11 479999999999999999999876
Q ss_pred cC
Q 027103 154 EG 155 (228)
Q Consensus 154 ~~ 155 (228)
+.
T Consensus 239 ~~ 240 (241)
T COG0580 239 LG 240 (241)
T ss_pred cc
Confidence 53
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.1e-09 Score=92.92 Aligned_cols=137 Identities=19% Similarity=0.154 Sum_probs=93.7
Q ss_pred chhHHHhhHHHHhhccccc-------CCC-----------CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027103 14 KFSERQPIGTSAQSDKDYK-------EPP-----------PAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGV 75 (228)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~-------~~~-----------~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~ 75 (228)
.|.++|.+|+.+++...+. ... ....+...+....+.+++++-|++||.+|+.+.+.. .+
T Consensus 113 ~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI--~D 190 (316)
T KOG0224|consen 113 VYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAI--TD 190 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEE--ec
Confidence 4999999999996552210 111 111111223445688999999999999998776432 22
Q ss_pred ccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhh--------ccch--hhHHHHHHHHhhhHHH
Q 027103 76 SKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLAR--------KLSL--TRAVFYMVMQCLGAVC 145 (228)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g--------~~~~--~~~~~yi~aQ~lGa~~ 145 (228)
.+++. . ....++.+|+.+++.-...|-.+|--+||||.+++.+.- -+++ .-.|+-|+++++|+++
T Consensus 191 ~rN~~---p--~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~ 265 (316)
T KOG0224|consen 191 KRNPI---P--TGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAIL 265 (316)
T ss_pred CCCCC---C--cchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhh
Confidence 22211 1 123488899999999999999999999999999998861 1111 2235568999999999
Q ss_pred HHHHHHhhcCCc
Q 027103 146 GAGVVKGFEGSK 157 (228)
Q Consensus 146 ga~l~~~~~~~~ 157 (228)
|++++......+
T Consensus 266 G~~iY~~~Ig~h 277 (316)
T KOG0224|consen 266 GGWIYDFFIGFH 277 (316)
T ss_pred hhhhheeeeecc
Confidence 999988776543
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=87.56 E-value=18 Score=31.45 Aligned_cols=148 Identities=16% Similarity=0.117 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhcc
Q 027103 48 WSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKL 127 (228)
Q Consensus 48 ~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~ 127 (228)
..++++..+-++-++-+++... ......+.+ .+...+.-++++++++.+.+++.+..--+ |--........+++
T Consensus 29 ~~~l~ai~AG~~i~lg~~~~~~---~~~~~~~~~-~~~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~I 102 (265)
T COG2116 29 KLLLLAILAGAFIGLGFLFYIT---VGTGLPGAP-GGLAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKI 102 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---hcccCCCCC-cchHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCc
Confidence 3456776665555554443321 111111111 12233334555555555566653332111 33333344557888
Q ss_pred chhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCcc---c-----cCCCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 027103 128 SLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN---V-----VAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 199 (228)
Q Consensus 128 ~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~---~-----~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~ 199 (228)
+|++.+--|+--.+|=++|++++-+++.-..+....++.. . -.-+.+..+.|..-.++.++..+.++..-..
T Consensus 103 s~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~ 182 (265)
T COG2116 103 SWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSA 182 (265)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998887777777777777766555541110111111111 0 0123456888888899999988888875543
Q ss_pred CC
Q 027103 200 KR 201 (228)
Q Consensus 200 ~~ 201 (228)
|.
T Consensus 183 k~ 184 (265)
T COG2116 183 KD 184 (265)
T ss_pred cc
Confidence 33
No 32
>PRK10805 formate transporter; Provisional
Probab=86.74 E-value=18 Score=31.83 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhhcC-CCCcccChhhHHHHHHhhccchhhHHHHH----HHHhhhHHHHHHHHHhhcCCcchhhcCCC
Q 027103 91 AWAFGGMIFALVYCTAG-ISGGHINPAVTFGLLLARKLSLTRAVFYM----VMQCLGAVCGAGVVKGFEGSKNYERLGGG 165 (228)
Q Consensus 91 ~~~~G~~v~~~i~~~~~-iSGahlNPAvTla~~l~g~~~~~~~~~yi----~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g 165 (228)
++.+.+.+.+.++.-+. .+| |-..+++ .+.||.+|.+..-.| ++-++|+++-+.+.+..- . +....+.
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~--~-~~~~~~~ 144 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSG--E-YMTANGQ 144 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--c-cccCccH
Confidence 44444445445554333 344 5554443 567888888877444 455555555544433211 0 1000000
Q ss_pred --cc--c---cCCCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 027103 166 --AN--V---VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 200 (228)
Q Consensus 166 --~~--~---~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~ 200 (228)
.. . -.-+.+.++.|+-=.+|.++..+.++.....|
T Consensus 145 ~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~~~~~ 186 (285)
T PRK10805 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGR 186 (285)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 00 0 01235778889999999999999888644333
No 33
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=68.05 E-value=78 Score=27.15 Aligned_cols=111 Identities=15% Similarity=0.035 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc-chhhcCCC--
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK-NYERLGGG-- 165 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~-~~~~~~~g-- 165 (228)
..++.+++++...++.-+..- -=|-......++.||.+|.+..--|.--.+|=++|+++.-.+.... .....+..
T Consensus 59 ~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~ 136 (250)
T PF01226_consen 59 VGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGE 136 (250)
T ss_dssp HHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHH
Confidence 345555555555555433221 1255555667778888988877666655555555555544332211 11100000
Q ss_pred -c---cccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 166 -A---NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 166 -~---~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
. ....-+.+.++.|+.=.++.++..+.++.....|+
T Consensus 137 ~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~~~~ 176 (250)
T PF01226_consen 137 YLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFAAKD 176 (250)
T ss_dssp HHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT-SS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 00122457889999999999999999998665443
No 34
>PRK10621 hypothetical protein; Provisional
Probab=63.68 E-value=48 Score=28.41 Aligned_cols=29 Identities=21% Similarity=0.362 Sum_probs=23.8
Q ss_pred hccchhhHHHHHHHHhhhHHHHHHHHHhh
Q 027103 125 RKLSLTRAVFYMVMQCLGAVCGAGVVKGF 153 (228)
Q Consensus 125 g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~ 153 (228)
++.+|+..+...++=+.|+.+|+.+...+
T Consensus 73 ~~v~~~~~~~l~~~~l~Ga~~G~~l~~~l 101 (266)
T PRK10621 73 KVVNLADQKLNIAMTFVGSMSGALLVQYV 101 (266)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678889999999999999999876543
No 35
>PRK09713 focB putative formate transporter; Provisional
Probab=59.97 E-value=1.2e+02 Score=26.59 Aligned_cols=77 Identities=8% Similarity=-0.031 Sum_probs=44.1
Q ss_pred HHhhccchhhHHHH----HHHHhhhHHHHHHHHHhhcCCcchhhcCC--Ccc--c---cCCCCchhHHHHHHHHHHHHHH
Q 027103 122 LLARKLSLTRAVFY----MVMQCLGAVCGAGVVKGFEGSKNYERLGG--GAN--V---VAHGYTKGDGLGAEIIGTFVLV 190 (228)
Q Consensus 122 ~l~g~~~~~~~~~y----i~aQ~lGa~~ga~l~~~~~~~~~~~~~~~--g~~--~---~~~~~s~~~~f~~E~~~T~~L~ 190 (228)
...++.+|++..-. +++-++|+++-+.+.+.. ..+...+. +.. . -.-+.+.++.|+--.+|.++..
T Consensus 99 ~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s---~~~~~~~~~~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVc 175 (282)
T PRK09713 99 KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFS---GLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVC 175 (282)
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 45778888777744 455666666665554321 11110000 000 0 0124578899999999999999
Q ss_pred HHHHHhccCCC
Q 027103 191 YTVFSATDAKR 201 (228)
Q Consensus 191 ~~il~~~~~~~ 201 (228)
+.++.....|+
T Consensus 176 laV~~~~~~k~ 186 (282)
T PRK09713 176 LALWMSYCGRS 186 (282)
T ss_pred HHHHHHhhccc
Confidence 98886544333
No 36
>COG0730 Predicted permeases [General function prediction only]
Probab=55.07 E-value=95 Score=26.22 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=23.7
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhh
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGF 153 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~ 153 (228)
.++.+|+....+..+=++|+++|+.+...+
T Consensus 68 ~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~ 97 (258)
T COG0730 68 RGNVDWKLALILLLGALIGAFLGALLALLL 97 (258)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345679999999999999999997666543
No 37
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=52.11 E-value=1.5e+02 Score=25.19 Aligned_cols=84 Identities=19% Similarity=0.137 Sum_probs=46.0
Q ss_pred ChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc-c-hhhcCC-Cc-----cccCCCCchhHHHHHHHHH
Q 027103 114 NPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK-N-YERLGG-GA-----NVVAHGYTKGDGLGAEIIG 185 (228)
Q Consensus 114 NPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~-~-~~~~~~-g~-----~~~~~~~s~~~~f~~E~~~ 185 (228)
|-......++.||.+|.+..-.|.--.+|=++|+++.-.+.... . .+..+. .. .....+.+.++.|+.=+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 33333344667888888877666655555555555543332110 0 000000 00 0011245778888888999
Q ss_pred HHHHHHHHHHhc
Q 027103 186 TFVLVYTVFSAT 197 (228)
Q Consensus 186 T~~L~~~il~~~ 197 (228)
.++..+.++...
T Consensus 148 n~lV~lav~~~~ 159 (239)
T TIGR00790 148 NWLVCLAVWMSL 159 (239)
T ss_pred HHHHHHHHHHHH
Confidence 999998887533
No 38
>PRK11562 nitrite transporter NirC; Provisional
Probab=50.04 E-value=1.7e+02 Score=25.41 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhhhcCC-CCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCC--cchhhcCCC-c
Q 027103 91 AWAFGGMIFALVYCTAGI-SGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGS--KNYERLGGG-A 166 (228)
Q Consensus 91 ~~~~G~~v~~~i~~~~~i-SGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~--~~~~~~~~g-~ 166 (228)
+..+++++.+.++..+.. +| |=.......+.||.+|++.+-.|.-=.+|=++|+++.-.+... ......... .
T Consensus 62 g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 445555555555542221 11 3333334566788888877766655555555555544333211 000000000 0
Q ss_pred c---ccCCCCchhHHHHHHHHHHHHHHHHHHHhcc
Q 027103 167 N---VVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 198 (228)
Q Consensus 167 ~---~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~ 198 (228)
. .-.-+.+.++.|+-=.+|.++..+.++....
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~ 173 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIR 173 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0012346788898999999999998886543
No 39
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=49.94 E-value=5.5 Score=35.80 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=18.2
Q ss_pred hhcCCCCcccChhhHHHHHHhh
Q 027103 104 CTAGISGGHINPAVTFGLLLAR 125 (228)
Q Consensus 104 ~~~~iSGahlNPAvTla~~l~g 125 (228)
+.++=||||+.||++++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3456699999999999988864
No 40
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=46.31 E-value=71 Score=26.37 Aligned_cols=26 Identities=15% Similarity=0.259 Sum_probs=21.8
Q ss_pred ccchhhHHHHHHHHhhhHHHHHHHHH
Q 027103 126 KLSLTRAVFYMVMQCLGAVCGAGVVK 151 (228)
Q Consensus 126 ~~~~~~~~~yi~aQ~lGa~~ga~l~~ 151 (228)
+.+|+....+.++-+.|..+|+.+..
T Consensus 60 ~i~~~~~~~~~~~~~~g~~iG~~l~~ 85 (240)
T PF01925_consen 60 NIDWKIVLPLIIGALIGVVIGAWLLS 85 (240)
T ss_pred ccchhhhhhhhhHhHHHHHHHHhhhc
Confidence 37898889999999999999877765
No 41
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=45.37 E-value=4.7 Score=30.37 Aligned_cols=20 Identities=25% Similarity=0.393 Sum_probs=17.1
Q ss_pred CCCcccChhhHHHHHHhhcc
Q 027103 108 ISGGHINPAVTFGLLLARKL 127 (228)
Q Consensus 108 iSGahlNPAvTla~~l~g~~ 127 (228)
=|+||+||.+.++-.+.++.
T Consensus 7 Gt~Ghv~P~lala~~L~~rG 26 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRRG 26 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHTT
T ss_pred CChhHHHHHHHHHHHHhccC
Confidence 38899999999999997653
No 42
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=34.32 E-value=1.3e+02 Score=23.17 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=45.4
Q ss_pred chhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 027103 128 SLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSH 207 (228)
Q Consensus 128 ~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~~ 207 (228)
.|++.++++ .+|+.+|+.+-|.+-.- .+.. ..+. -++..+..-.+++|++-+..-...+ +... .
T Consensus 5 ~~~~~~l~V---~~GG~~Ga~lRy~l~~~--~~~~------~~~~-fP~gTl~VNv~GsfllG~l~~~~~~-~~~~---~ 68 (133)
T PRK14218 5 VWWQSLLLV---MLGGAFGSGLRFVIGSC--LLQR------FGAG-FPWGTLAVNLIGSFVAGFLLIWLDK-RGSA---G 68 (133)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHH--HHHh------cCCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCC---C
Confidence 355555443 48999999887765311 1100 0111 2356788999999998775433322 2111 1
Q ss_pred CceeehHHHHhhhhccc
Q 027103 208 VPVSILSPCHSLSSFLR 224 (228)
Q Consensus 208 ~p~~~g~~i~~~~~f~~ 224 (228)
.++...+..|.+++||.
T Consensus 69 ~~~~~~l~tGflGgfTT 85 (133)
T PRK14218 69 WPWRMLLIVGLIGGLTT 85 (133)
T ss_pred HHHHHHHHHHHhchhcc
Confidence 23455667777777764
No 43
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=25.01 E-value=1.9e+02 Score=21.52 Aligned_cols=47 Identities=19% Similarity=0.374 Sum_probs=36.4
Q ss_pred CcccChhhHHHHHHh-hcc-chhhHHHHHHHHhhhHHHHHHHHHhhcCC
Q 027103 110 GGHINPAVTFGLLLA-RKL-SLTRAVFYMVMQCLGAVCGAGVVKGFEGS 156 (228)
Q Consensus 110 GahlNPAvTla~~l~-g~~-~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~ 156 (228)
||.+.|-+.+--=+. |.. +..|-.+|+++-++|+=.|..+++++...
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 577888777776553 332 57788999999999999999999887543
No 44
>PF02537 CRCB: CrcB-like protein; InterPro: IPR003691 Three genes, crcA, cspE and crcB when present in high copy confer camphor resistance on a cell and suppress mutations in the chromosomal partition gene mukB in Escherichia coli. The cspE gene has been previously identified as a cold shock-like protein with homologues in all organisms tested []. Camphor and mukB mutations may interfere with chromosome condensation and high copy crcA, cspE and crcB have been implicated as promoting or protecting chromosome folding [].; GO: 0016020 membrane
Probab=24.78 E-value=1.5e+02 Score=21.83 Aligned_cols=73 Identities=14% Similarity=0.085 Sum_probs=43.3
Q ss_pred HhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCceeehHHHHh
Q 027103 139 QCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPVSILSPCHS 218 (228)
Q Consensus 139 Q~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~~~p~~~g~~i~~ 218 (228)
-.+|+.+|+++-+.+.... + ...+...+..+..-+++++++-+..-....+.+ .+...++...+.+|.
T Consensus 4 v~lgg~~Ga~~R~~l~~~~-----~-----~~~~~~p~gt~~vN~~g~fllG~~~~~~~~~~~--~~~~~~~~~~l~~Gf 71 (117)
T PF02537_consen 4 VALGGALGALLRYGLSKLL-----N-----RRWGWFPWGTLLVNVLGCFLLGLLAGLLAKKLA--SKWSPSLRLFLGTGF 71 (117)
T ss_pred HHHHHHHHHHHHHHHHHHh-----c-----cccCCCchHHHHHHHHHHHHHHHHHHHHHHhcc--ccCCHHHHHHHHHHH
Confidence 4678999998887764322 0 011112567789999999988886554332111 112235566777776
Q ss_pred hhhcc
Q 027103 219 LSSFL 223 (228)
Q Consensus 219 ~~~f~ 223 (228)
+++|+
T Consensus 72 ~G~lT 76 (117)
T PF02537_consen 72 CGGLT 76 (117)
T ss_pred cchHH
Confidence 66554
No 45
>KOG3415 consensus Putative Rab5-interacting protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.31 E-value=29 Score=26.33 Aligned_cols=24 Identities=21% Similarity=-0.075 Sum_probs=18.3
Q ss_pred ccccccchhHHHhhHHHHhhcccc
Q 027103 8 VKLGANKFSERQPIGTSAQSDKDY 31 (228)
Q Consensus 8 ~~~~~~~Y~~aQ~~G~~~~~~~~~ 31 (228)
+++.++-||.+|++|-+++..-..
T Consensus 39 dellDViyW~rQVi~l~lGviwGi 62 (129)
T KOG3415|consen 39 DELLDVIYWIRQVIGLILGVIWGI 62 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345677999999999998775433
No 46
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=23.37 E-value=37 Score=30.80 Aligned_cols=23 Identities=43% Similarity=0.686 Sum_probs=19.8
Q ss_pred hhcCCCCcccChhhHHHHHHhhc
Q 027103 104 CTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 104 ~~~~iSGahlNPAvTla~~l~g~ 126 (228)
.+++-||||+=||.+++..+..+
T Consensus 5 l~~gGTGGHv~pAlAl~~~l~~~ 27 (357)
T COG0707 5 LTAGGTGGHVFPALALAEELAKR 27 (357)
T ss_pred EEeCCCccchhHHHHHHHHHHhh
Confidence 45677999999999999999765
No 47
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=22.70 E-value=5.2e+02 Score=22.61 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=27.6
Q ss_pred ccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 126 KLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 126 ~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
..||....-+++-|-+=+-+|+.+.+...+++
T Consensus 96 ~~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~ 127 (271)
T TIGR02587 96 ETSLKEIVGKVAFQGVPFSLGAALARQQLGDT 127 (271)
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHhCCC
Confidence 34788999999999999999999999888654
No 48
>PRK14221 camphor resistance protein CrcB; Provisional
Probab=22.59 E-value=2e+02 Score=21.89 Aligned_cols=72 Identities=15% Similarity=-0.006 Sum_probs=40.7
Q ss_pred HHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCceeehHHHH
Q 027103 138 MQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPVSILSPCH 217 (228)
Q Consensus 138 aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~~~p~~~g~~i~ 217 (228)
.=.+|+.+|+.+-|.+..- .+. .+. -++..++.-++++|++-+..-.....++ . ..++...+..|
T Consensus 10 ~V~lGg~~Ga~~R~~l~~~--~~~--------~~~-fP~gTl~vNi~G~fllG~~~~~~~~~~~-~---~~~~~~~l~tG 74 (124)
T PRK14221 10 GIFLAAMLGGLVRYLVSTW--LPA--------SPD-FPWGTLFVNYLGIFCLIYLVKGYLVYKG-T---SKGLILALGTG 74 (124)
T ss_pred HHHHHHHHHHHHHHHHHHH--Hcc--------cCC-CchHHHHHHHHHHHHHHHHHHHHHhccc-C---CHHHHHHHHHH
Confidence 3468899999887765421 110 011 2345688899999998766422222111 1 12355666777
Q ss_pred hhhhccc
Q 027103 218 SLSSFLR 224 (228)
Q Consensus 218 ~~~~f~~ 224 (228)
.+++||.
T Consensus 75 f~GgfTT 81 (124)
T PRK14221 75 FCGGLTT 81 (124)
T ss_pred Hhchhhh
Confidence 6766653
No 49
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=21.22 E-value=2e+02 Score=21.60 Aligned_cols=29 Identities=7% Similarity=0.116 Sum_probs=23.7
Q ss_pred hccchhhHHHHHHHHhhhHHHHHHHHHhh
Q 027103 125 RKLSLTRAVFYMVMQCLGAVCGAGVVKGF 153 (228)
Q Consensus 125 g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~ 153 (228)
++.++.+...|+..+++++++++.+-+.+
T Consensus 88 ~~~~~~~a~~y~~~s~~~gl~a~~~G~~l 116 (118)
T PRK14213 88 MAKRVKESILYIALTLAGSLLAFWCGWTI 116 (118)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34468889999999999999998876554
Done!