Query 027103
Match_columns 228
No_of_seqs 207 out of 1616
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 07:47:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027103.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027103hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 6.5E-40 2.2E-44 286.2 15.7 193 28-221 38-234 (304)
2 3iyz_A Aquaporin-4; water tran 100.0 6.3E-37 2.1E-41 269.3 18.4 191 26-219 22-217 (340)
3 3gd8_A Aquaporin-4; proton exc 100.0 1.4E-36 4.8E-41 255.3 16.0 167 49-218 2-168 (223)
4 1j4n_A Aquaporin 1; membrane p 100.0 5.8E-36 2E-40 258.2 17.1 175 43-219 3-181 (271)
5 2zz9_A Aquaporin-4; water tran 100.0 7.6E-36 2.6E-40 260.0 17.2 173 44-219 6-178 (301)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 7.3E-36 2.5E-40 256.7 15.0 174 44-224 5-178 (266)
7 2b6o_A Aquaporin-0, lens fiber 100.0 7.3E-35 2.5E-39 250.3 19.5 174 44-224 3-176 (263)
8 2f2b_A Aquaporin AQPM; protein 100.0 6.7E-35 2.3E-39 248.5 15.3 174 49-223 3-190 (246)
9 2w2e_A AQY1, aquaporin, aquapo 100.0 2.1E-34 7.2E-39 249.1 17.0 170 46-221 40-213 (279)
10 3llq_A Aquaporin Z 2; aquapori 100.0 1.3E-34 4.4E-39 247.2 15.2 172 47-222 26-202 (256)
11 1ldf_A Glycerol uptake facilit 100.0 1E-34 3.5E-39 251.7 13.1 169 49-221 6-192 (281)
12 2o9g_A Aquaporin Z; integral m 100.0 4.3E-34 1.5E-38 241.8 15.2 169 50-223 4-180 (234)
13 3c02_A Aquaglyceroporin; membr 100.0 1.7E-34 5.8E-39 247.5 11.0 171 48-222 7-183 (258)
14 2f2b_A Aquaporin AQPM; protein 99.8 3.4E-21 1.2E-25 163.9 10.5 136 12-155 100-245 (246)
15 2w2e_A AQY1, aquaporin, aquapo 99.8 7.2E-19 2.5E-23 151.8 11.1 138 12-157 130-267 (279)
16 2o9g_A Aquaporin Z; integral m 99.8 9.9E-19 3.4E-23 147.6 9.9 137 12-157 84-233 (234)
17 3llq_A Aquaporin Z 2; aquapori 99.8 1.4E-18 4.8E-23 148.1 9.5 134 12-154 109-253 (256)
18 2b6o_A Aquaporin-0, lens fiber 99.8 1E-17 3.4E-22 143.6 13.8 138 12-157 86-226 (263)
19 3d9s_A Aquaporin-5, AQP-5; aqu 99.7 1.5E-17 5.2E-22 142.6 11.8 138 12-157 88-229 (266)
20 2zz9_A Aquaporin-4; water tran 99.7 1.4E-17 4.6E-22 145.0 11.6 137 12-156 93-232 (301)
21 3iyz_A Aquaporin-4; water tran 99.7 1.3E-17 4.4E-22 146.7 11.2 138 12-157 132-272 (340)
22 3gd8_A Aquaporin-4; proton exc 99.7 1.1E-17 3.8E-22 140.2 10.0 136 12-155 84-222 (223)
23 3cn5_A Aquaporin; membrane pro 99.7 9.8E-18 3.3E-22 146.2 7.7 143 12-157 142-290 (304)
24 1j4n_A Aquaporin 1; membrane p 99.7 3.7E-17 1.2E-21 140.7 10.2 138 12-157 96-236 (271)
25 1ldf_A Glycerol uptake facilit 99.7 4.8E-17 1.6E-21 140.7 8.8 104 48-157 143-258 (281)
26 3c02_A Aquaglyceroporin; membr 99.7 1.9E-16 6.5E-21 135.4 10.4 141 12-157 88-245 (258)
27 3kcu_A Probable formate transp 76.2 34 0.0012 28.8 12.3 106 90-201 71-187 (285)
28 3kly_A Putative formate transp 63.2 66 0.0023 26.9 12.0 107 90-201 70-186 (280)
29 3s2u_A UDP-N-acetylglucosamine 60.9 1.5 5E-05 38.0 -0.5 21 106-126 9-29 (365)
30 3tds_E Formate/nitrite transpo 48.7 91 0.0031 25.9 8.7 79 120-198 95-179 (268)
31 4fc4_A Nitrite transporter NIR 34.5 1.9E+02 0.0066 23.7 11.3 103 91-198 62-173 (261)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=6.5e-40 Score=286.18 Aligned_cols=193 Identities=68% Similarity=1.152 Sum_probs=152.2
Q ss_pred cccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcC
Q 027103 28 DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAG 107 (228)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~ 107 (228)
.+++.+|++.+..+.++.++++++|++++||+||++|+|++++++.......++....+++.+++++|+++++.+|++++
T Consensus 38 ~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~ 117 (304)
T 3cn5_A 38 GKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAG 117 (304)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeec
Confidence 47888888778888889999999999999999999999999998876554333334567888999999999999999999
Q ss_pred CCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHH
Q 027103 108 ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTF 187 (228)
Q Consensus 108 iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~ 187 (228)
+||||+|||||+++++.|+++|.+++.|+++|++||++|+++++.++++. ++..+.+.+.+.++.+.+++|+.|+++||
T Consensus 118 iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~-~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf 196 (304)
T 3cn5_A 118 ISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGP-YNQFGGGANSVALGYNKGTALGAEIIGTF 196 (304)
T ss_dssp TTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHTTTTCCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCcccccCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876 55555566667778899999999999999
Q ss_pred HHHHHHHHhccCCCCCCCC----CCceeehHHHHhhhh
Q 027103 188 VLVYTVFSATDAKRNARDS----HVPVSILSPCHSLSS 221 (228)
Q Consensus 188 ~L~~~il~~~~~~~~~~~~----~~p~~~g~~i~~~~~ 221 (228)
+|+++|+.++|++|..+++ ..|+.+|++|.++.+
T Consensus 197 iLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l 234 (304)
T 3cn5_A 197 VLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHL 234 (304)
T ss_dssp HHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHH
T ss_pred HHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHH
Confidence 9999999999877655544 567777777765433
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-37 Score=269.34 Aligned_cols=191 Identities=32% Similarity=0.484 Sum_probs=156.7
Q ss_pred hhcccccCCCCCCCCC-----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHH
Q 027103 26 QSDKDYKEPPPAPLFE-----PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFA 100 (228)
Q Consensus 26 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 100 (228)
...+.+.+|++.|-.. .++...+++||++++||+|||+|+|++++++.... ...+....+++.+++++|+++++
T Consensus 22 ~~~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~-~~~~~~~~g~l~Iala~GlaV~~ 100 (340)
T 3iyz_A 22 MGRDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWG-GSENPLPVDMVLISLCFGLSIAT 100 (340)
T ss_pred cCCCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCcchHHHHHHHHHHHHH
Confidence 4566777776665322 12334457899999999999999999999988652 22223345678899999999999
Q ss_pred HHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHH
Q 027103 101 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLG 180 (228)
Q Consensus 101 ~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~ 180 (228)
.+|+++++||||+|||||+++++.|+++|.+++.|+++|++||++|+++++.++++. .. ...+.+.+.++.+..++|+
T Consensus 101 ~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~-~~-~~lg~~~~~~~~s~~~~f~ 178 (340)
T 3iyz_A 101 MVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPS-VV-GGLGVTTVHGNLTAGHGLL 178 (340)
T ss_pred heeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchh-hc-CceeeccCCCccCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998765 21 1234455667889999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCceeehHHHHhh
Q 027103 181 AEIIGTFVLVYTVFSATDAKRNARDSHVPVSILSPCHSL 219 (228)
Q Consensus 181 ~E~~~T~~L~~~il~~~~~~~~~~~~~~p~~~g~~i~~~ 219 (228)
.|+++||+|+++|+++.|+++....+..|+.+|+++++.
T Consensus 179 ~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v~i~ 217 (340)
T 3iyz_A 179 VELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIG 217 (340)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHHHHH
Confidence 999999999999999999887665667889999888633
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=255.27 Aligned_cols=167 Identities=35% Similarity=0.570 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccc
Q 027103 49 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLS 128 (228)
Q Consensus 49 ~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~ 128 (228)
++||++++||+||++|++++++++.+.. .+.+....+++.+++++|+++++.+++++++||+|+|||||+++++.|+++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~-~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 80 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWG-GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTT-TTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCC
Confidence 5799999999999999999999887652 222334567888999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 027103 129 LTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 208 (228)
Q Consensus 129 ~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~~~~~~ 208 (228)
|.+++.|+++|++|+++|+.++|.+++++ .. ...+.+.+.++.+..++|+.|+++||+|+++|+++.|+||+..++..
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~-~~-~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~ 158 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTPPS-VV-GGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI 158 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHH-HH-TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccc-cc-cceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCc
Confidence 99999999999999999999999998765 22 12345566778899999999999999999999999998876666677
Q ss_pred ceeehHHHHh
Q 027103 209 PVSILSPCHS 218 (228)
Q Consensus 209 p~~~g~~i~~ 218 (228)
|+.+|+.+..
T Consensus 159 pl~iGl~v~~ 168 (223)
T 3gd8_A 159 ALAIGFSVAI 168 (223)
T ss_dssp HHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 8888887763
No 4
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=5.8e-36 Score=258.16 Aligned_cols=175 Identities=36% Similarity=0.568 Sum_probs=146.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccC----CCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhH
Q 027103 43 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS----NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVT 118 (228)
Q Consensus 43 ~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvT 118 (228)
+|.++++++|++++||+||++|+|++++++...... +......+++.+++++|+++++.+|+++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 456677899999999999999999999988765421 1112223577899999999999999999999999999999
Q ss_pred HHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhcc
Q 027103 119 FGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 198 (228)
Q Consensus 119 la~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~ 198 (228)
+++++.|+++|.+++.||++|++||++|+++++.++++. . ....+.+.+.++.+..++|+.|+++||+|+++|+++.|
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d 160 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSL-P-DNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-T-TCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCC-c-ccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999998653 1 11234455667788899999999999999999999999
Q ss_pred CCCCCCCCCCceeehHHHHhh
Q 027103 199 AKRNARDSHVPVSILSPCHSL 219 (228)
Q Consensus 199 ~~~~~~~~~~p~~~g~~i~~~ 219 (228)
++|...++..|+.+|+.|...
T Consensus 161 ~~~~~~~~~~pl~IGl~v~~~ 181 (271)
T 1j4n_A 161 RRRRDLGGSGPLAIGFSVALG 181 (271)
T ss_dssp SSCCCCCSCHHHHHHHHHHHH
T ss_pred ccCCCccccHHHHHHHHHHHH
Confidence 877655678899999888743
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=7.6e-36 Score=260.01 Aligned_cols=173 Identities=35% Similarity=0.528 Sum_probs=146.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 44 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 44 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
+....+++|++++||+||++|+|++++++...... .+....+++.+++++|+++++.+|+++++||||+|||||+++++
T Consensus 6 ~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~-~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 84 (301)
T 2zz9_A 6 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 84 (301)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHH
Confidence 44567899999999999999999999887654422 22234567889999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
.|+++|.+++.|+++|++||++|++++|.++++. .. .+.+.+.+.++.+..++|+.|+++||+|+++|+++.|++|..
T Consensus 85 ~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~-~~-~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 85 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPPS-VV-GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp TSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSC-GG-GTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc-CceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999875 22 233455566788999999999999999999999999887765
Q ss_pred CCCCCceeehHHHHhh
Q 027103 204 RDSHVPVSILSPCHSL 219 (228)
Q Consensus 204 ~~~~~p~~~g~~i~~~ 219 (228)
..+..|+.+|+++...
T Consensus 163 ~~~~~pl~IGl~v~i~ 178 (301)
T 2zz9_A 163 VTGSVALAIGFSVAIG 178 (301)
T ss_dssp CSSCHHHHHHHHHHHH
T ss_pred ccchHhHHHHHHHHHH
Confidence 5667888888888643
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=256.69 Aligned_cols=174 Identities=33% Similarity=0.454 Sum_probs=147.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 44 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 44 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
|.++++++|++++||+||++|+|++++++.... ....+++.+++++|+++++.+|+++++||||+|||||+++++
T Consensus 5 e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~-----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 79 (266)
T 3d9s_A 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP-----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLV 79 (266)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHH
Confidence 445678899999999999999999999875321 122467789999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
.|+++|.+++.|+++|++||++|+.+++.+++++ . ....+.+.+.++.+..++|+.|+++||+|+++|+++.|++|+.
T Consensus 80 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~-~-~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 157 (266)
T 3d9s_A 80 GNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLN-A-RGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 157 (266)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHH-H-HTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc-c-cCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999999999999999999999999999999764 2 2233455566778999999999999999999999999988765
Q ss_pred CCCCCceeehHHHHhhhhccc
Q 027103 204 RDSHVPVSILSPCHSLSSFLR 224 (228)
Q Consensus 204 ~~~~~p~~~g~~i~~~~~f~~ 224 (228)
.++..|+.+|+.+.+..+..+
T Consensus 158 ~~~~~pl~IGl~v~~~~~~~g 178 (266)
T 3d9s_A 158 PVGSPALSIGLSVTLGHLVGI 178 (266)
T ss_dssp CCCCHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHhh
Confidence 667889999988875544433
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=7.3e-35 Score=250.30 Aligned_cols=174 Identities=33% Similarity=0.440 Sum_probs=147.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH
Q 027103 44 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL 123 (228)
Q Consensus 44 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l 123 (228)
|.+.++++|++++||+||++|++++++++... +....+++.+++++|+++++.+++++++||+|+|||||+++++
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-----~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~ 77 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLV 77 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-----CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHH
Confidence 55677899999999999999999999987532 1123356778999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 027103 124 ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA 203 (228)
Q Consensus 124 ~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~~ 203 (228)
.|+++|.+++.|+++|++|+++|+.+++.+++++ +. ...+.+.+.++.+..++|+.|+++||+|+++|+++.|++|+.
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~-~~-~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 155 (263)
T 2b6o_A 78 GSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPA-VR-GNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNG 155 (263)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTT-TC-SSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cc-cccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999999999999999999999999999999765 22 123455567788999999999999999999999999887766
Q ss_pred CCCCCceeehHHHHhhhhccc
Q 027103 204 RDSHVPVSILSPCHSLSSFLR 224 (228)
Q Consensus 204 ~~~~~p~~~g~~i~~~~~f~~ 224 (228)
..+..|+.+|+.+.+..+..+
T Consensus 156 ~~~~~pl~IGl~v~~~~~~~g 176 (263)
T 2b6o_A 156 RLGSVALAVGFSLTLGHLFGM 176 (263)
T ss_dssp SCCCHHHHHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHHHhcc
Confidence 667889999999886544433
No 8
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=6.7e-35 Score=248.52 Aligned_cols=174 Identities=28% Similarity=0.347 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCC--------CC-----CccchhhHHHHHHHHHHHHHhhhcCCCCcccC
Q 027103 49 SFYRAGIAEFMATFLFLYITVLTVMGVS-KSNT--------KC-----STVGIQGIAWAFGGMIFALVYCTAGISGGHIN 114 (228)
Q Consensus 49 ~~~~~~~aE~igT~~lv~~~~~~~~~~~-~~~~--------~~-----~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlN 114 (228)
+++|++++||+||++|+|++++++.... .+++ .. ...+++.+++++|+++++.+|+++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4689999999999999999998877643 1111 00 12234568999999999999999999999999
Q ss_pred hhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHH
Q 027103 115 PAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF 194 (228)
Q Consensus 115 PAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il 194 (228)
||||+++++.|+++|+|++.|+++|++|+++|+.+++.+++++.....+.+.+.+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999998742222223345555688999999999999999999999
Q ss_pred HhccCCCCCCCCCCceeehHHHHhhhhcc
Q 027103 195 SATDAKRNARDSHVPVSILSPCHSLSSFL 223 (228)
Q Consensus 195 ~~~~~~~~~~~~~~p~~~g~~i~~~~~f~ 223 (228)
.+.+++|.. ++..|+.+|+.+.++....
T Consensus 163 ~~~~~~~~~-~~~~pl~iGl~v~~~~~~~ 190 (246)
T 2f2b_A 163 GIAVDERAP-KGFAGIIIGLTVAGIITTL 190 (246)
T ss_dssp HHTTSTTSC-TTCHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC-CceeeHHHHHHHHHHHhcc
Confidence 977655543 5678888888887554433
No 9
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2.1e-34 Score=249.05 Aligned_cols=170 Identities=25% Similarity=0.331 Sum_probs=139.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhc--ccc--CCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHH
Q 027103 46 KSWSFYRAGIAEFMATFLFLYITVLTVMG--VSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL 121 (228)
Q Consensus 46 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~ 121 (228)
+.++.+|++++||+||++|+|++++++.. ... .+......+++.+++++|+++++.+|+++++||||+|||||+++
T Consensus 40 ~~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 119 (279)
T 2w2e_A 40 SVRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLAL 119 (279)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHH
Confidence 34578999999999999999999886422 111 11122234577899999999999999999999999999999999
Q ss_pred HHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcCCCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 122 LLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 122 ~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
++.|+++|.+++.|+++|++||++|+++++.++++.. ...+.+.++.+..++|+.|+++||+|+++|+++.++++
T Consensus 120 ~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~-----~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~ 194 (279)
T 2w2e_A 120 VLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEI-----AFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKH 194 (279)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC-----CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccc-----eeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999997762 12344556788999999999999999999999887665
Q ss_pred CCCCCCCceeehHHHHhhhh
Q 027103 202 NARDSHVPVSILSPCHSLSS 221 (228)
Q Consensus 202 ~~~~~~~p~~~g~~i~~~~~ 221 (228)
+ .+...|+.+|+.+.++.+
T Consensus 195 ~-~~~~~pl~IGl~v~~~~l 213 (279)
T 2w2e_A 195 R-ATWFAPFVIGIALLIAHL 213 (279)
T ss_dssp T-TGGGHHHHHHHHHHHHHH
T ss_pred C-CcCcHHHHHHHHHHHHHH
Confidence 4 345788888888875533
No 10
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.3e-34 Score=247.18 Aligned_cols=172 Identities=27% Similarity=0.389 Sum_probs=137.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc
Q 027103 47 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 47 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~ 126 (228)
..+++|++++||+||++|++++++++......+ ....+++.+++++|+++++.+|+++++||||+|||||+++++.|+
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~--~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~ 103 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP--ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR 103 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC
Confidence 346799999999999999999999875433221 234567889999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHHHHHHhhcCCc-chhhcCC---CccccC-CCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 127 LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK-NYERLGG---GANVVA-HGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 127 ~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~-~~~~~~~---g~~~~~-~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
++|.+++.|+++|++||++|+++++.++++. .++..+. +..... ...+..++|+.|+++||+|+++|+++.|+++
T Consensus 104 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~ 183 (256)
T 3llq_A 104 FPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV 183 (256)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999998543 2322111 111112 3568899999999999999999999998765
Q ss_pred CCCCCCCceeehHHHHhhhhc
Q 027103 202 NARDSHVPVSILSPCHSLSSF 222 (228)
Q Consensus 202 ~~~~~~~p~~~g~~i~~~~~f 222 (228)
+++..|+.+|+.+.++...
T Consensus 184 --~~~~~pl~IGl~v~~i~~~ 202 (256)
T 3llq_A 184 --PAGFAPIAIGLALTLIHLI 202 (256)
T ss_dssp --CTTCHHHHHHHHHHHHHHH
T ss_pred --CccchhHHHHHHHHHHHHH
Confidence 3457899999888855443
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1e-34 Score=251.72 Aligned_cols=169 Identities=25% Similarity=0.330 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccc
Q 027103 49 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLS 128 (228)
Q Consensus 49 ~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~ 128 (228)
+++|++++||+||++|+|++++++.....++. ..+.+.+++++|+++++.+|+++++||||+|||||+++++.|+++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~---~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 82 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFD 82 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCC
Confidence 57899999999999999999988766544321 234455899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhc-----------------CCCccccCCCCchhHHHHHHHHHHHHHHH
Q 027103 129 LTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERL-----------------GGGANVVAHGYTKGDGLGAEIIGTFVLVY 191 (228)
Q Consensus 129 ~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~-----------------~~g~~~~~~~~s~~~~f~~E~~~T~~L~~ 191 (228)
|.+++.|+++|++||++|++++|.++++. ++.. +...+.+.++.+..++|+.|+++||+|++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~ 161 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYNL-FFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMG 161 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998765 2111 11234455668899999999999999999
Q ss_pred HHHHhccCCCCCC-CCCCceeehHHHHhhhh
Q 027103 192 TVFSATDAKRNAR-DSHVPVSILSPCHSLSS 221 (228)
Q Consensus 192 ~il~~~~~~~~~~-~~~~p~~~g~~i~~~~~ 221 (228)
+|+++.|+||..+ ++..|+.+|+.|.++..
T Consensus 162 ~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~ 192 (281)
T 1ldf_A 162 LILALTDDGNGVPRGPLAPLLIGLLIAVIGA 192 (281)
T ss_dssp HHHHHHCTTSSSCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHHHH
Confidence 9999999877543 46889999998885543
No 12
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=4.3e-34 Score=241.76 Aligned_cols=169 Identities=24% Similarity=0.381 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccch
Q 027103 50 FYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSL 129 (228)
Q Consensus 50 ~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~ 129 (228)
++|++++||+||++|++++++++...... +..+.+++.+++++|+++++.+|+++++||||+|||||+++++.|+++|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~--~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGF--PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCC--CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCH
Confidence 58999999999999999999887433221 1234467889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhhcCCc-chhhc-----C--CCccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 130 TRAVFYMVMQCLGAVCGAGVVKGFEGSK-NYERL-----G--GGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 130 ~~~~~yi~aQ~lGa~~ga~l~~~~~~~~-~~~~~-----~--~g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
++++.|+++|++|+++|+.++|.++++. .++.. . .+.+.+ .+.+..++|+.|+++|++|+++|+.++|+|+
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p-~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~ 160 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP-GGYSMLSALVVELVLSAGFLLVIHGATDKFA 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGST-TCCCHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCC-CccchHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998753 13221 1 112222 2578899999999999999999999988654
Q ss_pred CCCCCCCceeehHHHHhhhhcc
Q 027103 202 NARDSHVPVSILSPCHSLSSFL 223 (228)
Q Consensus 202 ~~~~~~~p~~~g~~i~~~~~f~ 223 (228)
+++..|+.+|+.+.++....
T Consensus 161 --~~~~~pl~IGl~v~~~~~~~ 180 (234)
T 2o9g_A 161 --PAGFAPIAIGLACTLIHLIS 180 (234)
T ss_dssp --CTTCHHHHHHHHHHHHHHHH
T ss_pred --ccchHHHHHHHHHHHHHHHc
Confidence 45688999999888664443
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.7e-34 Score=247.50 Aligned_cols=171 Identities=19% Similarity=0.214 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhcc
Q 027103 48 WSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKL 127 (228)
Q Consensus 48 ~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~ 127 (228)
++++|++++||+||++|+|++++++......+ ...+++.+++++|+++++.+|+++++||||+|||||+++++.|++
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 83 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKF 83 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCC
Confidence 45789999999999999999999877544221 134678899999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhhhHHHHHHHHHhhcCCcchhhcC-C---CccccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC-
Q 027103 128 SLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLG-G---GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRN- 202 (228)
Q Consensus 128 ~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~-~---g~~~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~~- 202 (228)
+|.+++.|+++|++||++|+.+++.++++. ++..+ . +.+......+..++|+.|+++||+|+++|++++|+||+
T Consensus 84 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~-~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~ 162 (258)
T 3c02_A 84 DLKKIPVYFFAQLLGAFVGTSTVYGLYHGF-ISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICG 162 (258)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHTHHH-HHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcchh-hhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCC
Confidence 999999999999999999999999998765 33221 1 11122233456679999999999999999999988765
Q ss_pred CCCCCC-ceeehHHHHhhhhc
Q 027103 203 ARDSHV-PVSILSPCHSLSSF 222 (228)
Q Consensus 203 ~~~~~~-p~~~g~~i~~~~~f 222 (228)
..++.. |+.+|+.+.++...
T Consensus 163 ~~~~~~~pl~IGl~v~~~~~~ 183 (258)
T 3c02_A 163 KFHILKLSSVVGLIILCIGIT 183 (258)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHh
Confidence 344566 88888888755443
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.85 E-value=3.4e-21 Score=163.88 Aligned_cols=136 Identities=20% Similarity=0.166 Sum_probs=101.2
Q ss_pred ccchhHHHhhHHHHhhcccccCCCC----CCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccc
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPP----APLFEPGEL-KSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG 86 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~ 86 (228)
...|+++|++|+++++...+...+. ........+ ...+.++.++.|+++|++|++++++....... ..
T Consensus 100 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~------~~- 172 (246)
T 2f2b_A 100 VVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERA------PK- 172 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTS------CT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCC------CC-
Confidence 4579999999999965532211111 111111112 24467899999999999999998875432111 11
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHH-----hhccchhhHHHHHHHHhhhHHHHHHHHHhhcC
Q 027103 87 IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLL-----ARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG 155 (228)
Q Consensus 87 ~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l-----~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~ 155 (228)
...++.+|+.++..+++.+++||+|+|||||+++++ .++..|.+.|+||++|++|+++|+++++.+++
T Consensus 173 -~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 173 -GFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -ceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 125889999999999999999999999999999999 23557889999999999999999999887754
No 15
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.78 E-value=7.2e-19 Score=151.82 Aligned_cols=138 Identities=14% Similarity=0.075 Sum_probs=102.5
Q ss_pred ccchhHHHhhHHHHhhcccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHH
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIA 91 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (228)
+..|+++|++|+++++...+...+.............+..+.++.|+++||+|+++++....... ... ...+
T Consensus 130 ~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~------~~~--~~~p 201 (279)
T 2w2e_A 130 GILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKH------RAT--WFAP 201 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCS------TTG--GGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCC------CCc--CcHH
Confidence 34699999999999665433222211111111112345788999999999999999876542211 011 1357
Q ss_pred HHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 92 WAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 92 ~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
+.+|+.+++..++.++.||+.+||||++++++..+.-+.++|+||++|++|+++|+++++.+...+
T Consensus 202 l~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~ 267 (279)
T 2w2e_A 202 FVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLN 267 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 889999999999999999999999999999998765456799999999999999999998886544
No 16
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.77 E-value=9.9e-19 Score=147.58 Aligned_cols=137 Identities=14% Similarity=0.153 Sum_probs=101.0
Q ss_pred ccchhHHHhhHHHHhhcccccC---CCC---------CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 027103 12 ANKFSERQPIGTSAQSDKDYKE---PPP---------APLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSN 79 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~ 79 (228)
...|+++|++|+++++...+.. .+. ........+...+.++.++.|+++|++|+++++.... .+.
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~- 160 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATD--KFA- 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTS--TTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcC--CCC-
Confidence 4479999999999955532211 000 1111111222346789999999999999999876431 111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc-cchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 80 TKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK-LSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 80 ~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~-~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
..+ ..++.+|+.++...+..++.||+.+||||++++++..+ ..|.++|+||++|++|+++|+++++.++.++
T Consensus 161 ----~~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 161 ----PAG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp ----CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred ----ccc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 111 25788999999999999999999999999999999653 4577999999999999999999998887543
No 17
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=1.4e-18 Score=148.10 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=98.1
Q ss_pred ccchhHHHhhHHHHhhcccccC----CC-C-----CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 027103 12 ANKFSERQPIGTSAQSDKDYKE----PP-P-----APLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTK 81 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~----~~-~-----~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~ 81 (228)
...|+++|++|+++++...+.. +. . ........+...+..+.++.|+++||+|+++++.... .+.
T Consensus 109 ~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d--~~~--- 183 (256)
T 3llq_A 109 LVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTH--GRV--- 183 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHS--TTS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcC--CCC---
Confidence 3469999999999965532211 10 0 0001111122346789999999999999998876432 111
Q ss_pred CCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhh-ccchhhHHHHHHHHhhhHHHHHHHHHhhc
Q 027103 82 CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLAR-KLSLTRAVFYMVMQCLGAVCGAGVVKGFE 154 (228)
Q Consensus 82 ~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g-~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~ 154 (228)
..+ ..++.+|+.++...++.++.||+.+||||++++++.. +..|.+.|+||++|++|+++|+++++.+.
T Consensus 184 --~~~--~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 184 --PAG--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp --CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred --Ccc--chhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 111 2478899999999999999999999999999999864 44577899999999999999999998775
No 18
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.75 E-value=1e-17 Score=143.65 Aligned_cols=138 Identities=22% Similarity=0.199 Sum_probs=101.3
Q ss_pred ccchhHHHhhHHHHhhccccc--CCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 12 ANKFSERQPIGTSAQSDKDYK--EPPPAPLFEPGEL-KSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
...|+++|++|++++....+. .+..........+ ...+..+.++.|+++||+|+++++... ...++ . ..+
T Consensus 86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~--d~~~~-~--~~~-- 158 (263)
T 2b6o_A 86 AICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATY--DERRN-G--RLG-- 158 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS--CTTSC-S--SCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHh--cccCC-C--Ccc--
Confidence 347999999999996553221 1111111111111 123568999999999999999988652 11111 0 111
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
..++.+|+.+++..++.++.||+.+||||++++++..+ .|.++|+||++|++|+++|+++++.++.++
T Consensus 159 ~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 159 SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp CHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred cHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-CccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 24788999999999999999999999999999999865 799999999999999999999998886544
No 19
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=142.65 Aligned_cols=138 Identities=20% Similarity=0.158 Sum_probs=100.6
Q ss_pred ccchhHHHhhHHHHhhcccccCCCC--CCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPP--APLFEPGEL-KSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
...|+++|++|+++++...+...+. ........+ ...+..+.++.|+++||+|++++++... ..+.. ..+
T Consensus 88 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d--~~~~~---~~~-- 160 (266)
T 3d9s_A 88 AFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTD--SRRTS---PVG-- 160 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC--TTCCS---CCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhc--ccCCC---ccc--
Confidence 3479999999999965532221110 001111111 2235788999999999999999987531 11110 111
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhh-HHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTR-AVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~-~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
..++.+|+.+.+.....++.||+.+||||++++++..+ .|.+ +|+||++|++|+++|+++++.+..++
T Consensus 161 ~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 161 SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-CcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 24788899888888888999999999999999999765 7888 99999999999999999998887554
No 20
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.73 E-value=1.4e-17 Score=145.00 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=99.7
Q ss_pred ccchhHHHhhHHHHhhcccccCCCCC--CCCCCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPPA--PLFEPG-ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
+..|+++|++|+++++...+...+.. ...... .....+..+.++.|+++||+|++++++... ..+. . ..+
T Consensus 93 ~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d--~~~~-~--~~~-- 165 (301)
T 2zz9_A 93 SVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCD--DKRT-D--VTG-- 165 (301)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSC--SSSS-C--CSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcC--CCCC-C--ccc--
Confidence 45799999999999665433322111 011111 112345789999999999999999876431 1111 0 011
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCC
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGS 156 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~ 156 (228)
..++.+|+.+.+.+...++.||+.+||||++++++... .|.++|+||++|++|+++|+++++.++.+
T Consensus 166 ~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 166 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 24788888888777777789999999999999999865 79999999999999999999999888754
No 21
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.73 E-value=1.3e-17 Score=146.70 Aligned_cols=138 Identities=17% Similarity=0.183 Sum_probs=99.7
Q ss_pred ccchhHHHhhHHHHhhcccccCCCCC--CCCCCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPPA--PLFEPGE-LKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
+..|+++|++|+++++...+...+.. ....... ....+..+.++.|+++||+|+++++...... +. . ..+
T Consensus 132 ~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~--~~-~--~~~-- 204 (340)
T 3iyz_A 132 SVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDK--RT-D--VTG-- 204 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCc--cC-C--ccc--
Confidence 44799999999999665433222111 0111111 1234678899999999999999987653211 10 0 011
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
..++.+|+.+.+.+...++.||+.+||||++++++... .|.++|+||++|++|+++|++++..++.+.
T Consensus 205 ~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 205 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 13678888887777777799999999999999999754 699999999999999999999998887544
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=140.19 Aligned_cols=136 Identities=20% Similarity=0.209 Sum_probs=96.2
Q ss_pred ccchhHHHhhHHHHhhcccccCCCC--CCCCCCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPP--APLFEPGE-LKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
...|+++|++|+++++...+...+. ........ ....+..+.++.|+++||+|++.++.... .+++. ..+
T Consensus 84 ~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~--~~~~~---~~~-- 156 (223)
T 3gd8_A 84 SVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCD--SKRTD---VTG-- 156 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTC--TTCSC---CCS--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhc--cccCC---ccC--
Confidence 3469999999999965532211110 00011111 11235688999999999999999876431 11111 011
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcC
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG 155 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~ 155 (228)
..++.+|+.+.+.....++.||+.+||||++++++..+ .|.++|+||++|++|+++|+++++.++.
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 13778888887777777789999999999999999865 6999999999999999999999887753
No 23
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.71 E-value=9.8e-18 Score=146.16 Aligned_cols=143 Identities=17% Similarity=0.088 Sum_probs=99.9
Q ss_pred ccchhHHHhhHHHHhhcccccCCCC---CCCCCCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccch
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEPPP---APLFEPG-ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGI 87 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~ 87 (228)
+..|+++|++|+++++...+...+. ....... .....+.++.++.|+++||+|+++++... ...+.... ....
T Consensus 142 ~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~-d~~~~~~~--~~~~ 218 (304)
T 3cn5_A 142 ALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSAT-DPKRSARD--SHVP 218 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTE-EEEEESTT--SCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhee-cCccCCCC--cccc
Confidence 4579999999999955532211100 0000000 11234578999999999999999987432 11111100 0000
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHh--hccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 88 QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLA--RKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 88 ~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~--g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
...++.+|+.+++..++.++.||+.+||||++++++. +...|.++|+||++|++|+++|+++++.++.++
T Consensus 219 ~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 219 ILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred cchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 1247889999999999999999999999999999997 234799999999999999999999998887644
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.70 E-value=3.7e-17 Score=140.72 Aligned_cols=138 Identities=15% Similarity=0.084 Sum_probs=97.7
Q ss_pred ccchhHHHhhHHHHhhcccccCC--CCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchh
Q 027103 12 ANKFSERQPIGTSAQSDKDYKEP--PPAPLFEPGEL-KSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQ 88 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 88 (228)
...|+++|++|+++++...+... .+......... ...+..+.++.|+++|++|+++++.... ..+.. ..+
T Consensus 96 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~~~---~~~-- 168 (271)
T 1j4n_A 96 AIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD---LGG-- 168 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC--SSCCC---CCS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcc--ccCCC---ccc--
Confidence 34699999999999655332211 11111111111 1223467889999999999998876431 11110 011
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 89 ~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
..++.+|+.+.+.+...++.||+.+||||++++++... .|.++|+||++|++|+++|+++++.++.++
T Consensus 169 ~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 169 SGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDHWIFWVGPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred cHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCcceeHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 24788898888777777789999999999999999764 689999999999999999999998887543
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.69 E-value=4.8e-17 Score=140.72 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhh--
Q 027103 48 WSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLAR-- 125 (228)
Q Consensus 48 ~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g-- 125 (228)
.+.++.++.|+++||+|+++++..... .+.. . .....++.+|+.++...++.++.||+.+||||++++++..
T Consensus 143 ~s~~~~~~~E~i~Tf~Lv~~il~~~d~--~~~~--~--~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~ 216 (281)
T 1ldf_A 143 INFVQAFAVEMVITAILMGLILALTDD--GNGV--P--RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWL 216 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHCT--TSSS--C--CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcc--CCCC--c--ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHh
Confidence 367899999999999999998875421 1110 0 0112578999999999999999999999999999999964
Q ss_pred ----ccchh------hHHHHHHHHhhhHHHHHHHHHhhcCCc
Q 027103 126 ----KLSLT------RAVFYMVMQCLGAVCGAGVVKGFEGSK 157 (228)
Q Consensus 126 ----~~~~~------~~~~yi~aQ~lGa~~ga~l~~~~~~~~ 157 (228)
+..|. ++|+||++|++|+++|+++++.+..++
T Consensus 217 ~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 217 AGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp TTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred cccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 12343 699999999999999999998887544
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.67 E-value=1.9e-16 Score=135.40 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=98.0
Q ss_pred ccchhHHHhhHHHHhhcccccC------CCCCCCC--CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 027103 12 ANKFSERQPIGTSAQSDKDYKE------PPPAPLF--EPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCS 83 (228)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~ 83 (228)
...|+++|++|+++++...+.. ....+.. ......+.+..+.++.|+++|++|+++++..... .+..
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~-~~~~---- 162 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDE-NICG---- 162 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCH-HHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCc-ccCC----
Confidence 4579999999999955422111 0000100 0111122334569999999999999998875421 1100
Q ss_pred ccchhhHHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhc-----cch----hhHHHHHHHHhhhHHHHHHHHHhhc
Q 027103 84 TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARK-----LSL----TRAVFYMVMQCLGAVCGAGVVKGFE 154 (228)
Q Consensus 84 ~~~~~~~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~-----~~~----~~~~~yi~aQ~lGa~~ga~l~~~~~ 154 (228)
....+.+++.+|+.++...++.++.||+.+||||++++++... ..| .++|+||++|++|+++|+++++.+.
T Consensus 163 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~ 242 (258)
T 3c02_A 163 KFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVI 242 (258)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTH
T ss_pred cccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHh
Confidence 0111223888999999999999999999999999999999753 245 4489999999999999999998887
Q ss_pred CCc
Q 027103 155 GSK 157 (228)
Q Consensus 155 ~~~ 157 (228)
.++
T Consensus 243 ~~~ 245 (258)
T 3c02_A 243 CPL 245 (258)
T ss_dssp HHH
T ss_pred ccc
Confidence 544
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=76.23 E-value=34 Score=28.80 Aligned_cols=106 Identities=12% Similarity=0.067 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccChhhHHHHHHhhccchhhHHHHH----HHHhhhHHHHHHHHHhhcCCcchhhcCC-
Q 027103 90 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYM----VMQCLGAVCGAGVVKGFEGSKNYERLGG- 164 (228)
Q Consensus 90 ~~~~~G~~v~~~i~~~~~iSGahlNPAvTla~~l~g~~~~~~~~~yi----~aQ~lGa~~ga~l~~~~~~~~~~~~~~~- 164 (228)
-++.+.+.+.+.++..+..--+ |--.+ ...+.||.+|.+..--| ++-++|+++-+.+.+... . +...++
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~--~-~~~~~~~ 144 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSG--E-YMTANGQ 144 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHT--G-GGTTTTH
T ss_pred HHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--c-cccCchH
Confidence 3455555555556554442222 32223 33457888887765444 455555555554433211 1 110010
Q ss_pred -Ccc-----ccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 165 -GAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 165 -g~~-----~~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
+.. .-.-+.+..+.|+-=.+|.++..+.++.....|+
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~ak~ 187 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRS 187 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 000 0123457789999999999999998887654443
No 28
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=63.22 E-value=66 Score=26.91 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHhhhcC-CCCcccChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcC-CcchhhcCCC--
Q 027103 90 IAWAFGGMIFALVYCTAG-ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG-SKNYERLGGG-- 165 (228)
Q Consensus 90 ~~~~~G~~v~~~i~~~~~-iSGahlNPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~-~~~~~~~~~g-- 165 (228)
-++.+.+.+.+.++..+. .+|-.+ .++ ..+.||.+|.+..--|.-=.+|=++|+++.-.+.. ...+.. .++
T Consensus 70 ~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~-~~~~~ 144 (280)
T 3kly_A 70 GGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFME-DGGQL 144 (280)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGT-TTTHH
T ss_pred HHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccC-CchHH
Confidence 355555555556665444 333333 232 34467888877766665555555555544433321 000111 111
Q ss_pred -cc--c---cCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 027103 166 -AN--V---VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 201 (228)
Q Consensus 166 -~~--~---~~~~~s~~~~f~~E~~~T~~L~~~il~~~~~~~ 201 (228)
.. . -.-+.+..+.|+-=.+|.++..+.++.....|+
T Consensus 145 ~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~ak~ 186 (280)
T 3kly_A 145 GLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARS 186 (280)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 00 0 122457789999999999999998887655443
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=60.90 E-value=1.5 Score=37.99 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=17.3
Q ss_pred cCCCCcccChhhHHHHHHhhc
Q 027103 106 AGISGGHINPAVTFGLLLARK 126 (228)
Q Consensus 106 ~~iSGahlNPAvTla~~l~g~ 126 (228)
++=||||++||.+++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 344899999999999998654
No 30
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=48.70 E-value=91 Score=25.90 Aligned_cols=79 Identities=10% Similarity=-0.003 Sum_probs=45.6
Q ss_pred HHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcC-CcchhhcCCCcc--cc---CCCCchhHHHHHHHHHHHHHHHHH
Q 027103 120 GLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG-SKNYERLGGGAN--VV---AHGYTKGDGLGAEIIGTFVLVYTV 193 (228)
Q Consensus 120 a~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~-~~~~~~~~~g~~--~~---~~~~s~~~~f~~E~~~T~~L~~~i 193 (228)
...+.||.+|.+..--|.--.+|=++|+++.-.+.. ...++..+.+.. .. ..+.+..+.|+-=++|.++..+.+
T Consensus 95 ~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaV 174 (268)
T 3tds_E 95 AGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEFFANTAASKASMPFTALFFRGILCNILVCVSV 174 (268)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 455688889888876666555666655555443331 110100000000 00 123567888999999999999988
Q ss_pred HHhcc
Q 027103 194 FSATD 198 (228)
Q Consensus 194 l~~~~ 198 (228)
+....
T Consensus 175 w~~~~ 179 (268)
T 3tds_E 175 LCSFR 179 (268)
T ss_dssp HHHHS
T ss_pred HHHhh
Confidence 86544
No 31
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=34.46 E-value=1.9e+02 Score=23.74 Aligned_cols=103 Identities=11% Similarity=0.021 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhhhcCCCCccc---ChhhHHHHHHhhccchhhHHHHHHHHhhhHHHHHHHHHhhcC-CcchhhcCCCc
Q 027103 91 AWAFGGMIFALVYCTAGISGGHI---NPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG-SKNYERLGGGA 166 (228)
Q Consensus 91 ~~~~G~~v~~~i~~~~~iSGahl---NPAvTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~l~~~~~~-~~~~~~~~~g~ 166 (228)
++.+++.+.+.++. |+.+ |-.......+.||.+|.+.+--|.--.+|=++|+++.-.+.. .......+...
T Consensus 62 g~~F~vGl~lVvl~-----g~eLfTgn~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~ 136 (261)
T 4fc4_A 62 GATFGIALTLVIIA-----GSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTS 136 (261)
T ss_dssp HHHTTHHHHHHHHT-----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTS
T ss_pred HHHHHHHHHHHHHc-----CCcccccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHH
Confidence 44444444444443 4444 433333455578888888776665444544444444332221 10000000000
Q ss_pred c--cc---CCCCchhHHHHHHHHHHHHHHHHHHHhcc
Q 027103 167 N--VV---AHGYTKGDGLGAEIIGTFVLVYTVFSATD 198 (228)
Q Consensus 167 ~--~~---~~~~s~~~~f~~E~~~T~~L~~~il~~~~ 198 (228)
. .. ....+..+.|+-=.+|.++..+.++....
T Consensus 137 ~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~~ 173 (261)
T 4fc4_A 137 IVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMAIR 173 (261)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 01 11245688888889999999888887543
Done!