Query 027106
Match_columns 228
No_of_seqs 143 out of 1777
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 05:01:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027106.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027106hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0604 Qor NADPH:quinone redu 100.0 4.2E-35 9.2E-40 233.2 22.2 216 2-225 108-326 (326)
2 KOG1197 Predicted quinone oxid 100.0 3.5E-35 7.7E-40 215.9 19.1 218 2-228 112-333 (336)
3 PLN03154 putative allyl alcoho 100.0 4.1E-34 8.8E-39 231.1 24.1 224 4-228 125-348 (348)
4 COG1064 AdhP Zn-dependent alco 100.0 2.2E-34 4.9E-39 224.7 17.6 206 2-226 133-338 (339)
5 COG2130 Putative NADP-dependen 100.0 2.1E-33 4.6E-38 211.7 21.6 225 2-227 114-340 (340)
6 cd08295 double_bond_reductase_ 100.0 1.5E-31 3.2E-36 215.7 23.5 224 2-225 115-338 (338)
7 TIGR02825 B4_12hDH leukotriene 100.0 4.2E-31 9.2E-36 212.0 22.7 219 3-224 104-325 (325)
8 cd08294 leukotriene_B4_DH_like 100.0 1.1E-30 2.4E-35 209.8 23.4 221 2-225 104-329 (329)
9 KOG1198 Zinc-binding oxidoredu 100.0 2.5E-31 5.3E-36 211.9 18.9 220 2-226 117-346 (347)
10 KOG0024 Sorbitol dehydrogenase 100.0 2E-30 4.4E-35 197.5 19.4 209 2-227 137-354 (354)
11 KOG1196 Predicted NAD-dependen 100.0 1.6E-30 3.5E-35 195.6 18.3 222 7-228 122-343 (343)
12 cd08281 liver_ADH_like1 Zinc-d 100.0 5.7E-30 1.2E-34 208.8 20.9 211 2-223 157-371 (371)
13 cd08239 THR_DH_like L-threonin 100.0 3.5E-29 7.7E-34 202.0 21.1 205 2-225 130-339 (339)
14 cd08293 PTGR2 Prostaglandin re 100.0 9.1E-29 2E-33 200.0 22.9 221 2-225 114-345 (345)
15 COG1062 AdhC Zn-dependent alco 100.0 1.4E-29 3E-34 194.5 16.5 211 2-224 151-365 (366)
16 PRK09880 L-idonate 5-dehydroge 100.0 4.9E-29 1.1E-33 201.4 20.2 203 2-225 137-343 (343)
17 KOG0023 Alcohol dehydrogenase, 100.0 3.3E-29 7.3E-34 190.5 17.0 209 2-227 148-356 (360)
18 KOG1202 Animal-type fatty acid 100.0 1.4E-29 3.1E-34 217.5 16.5 218 2-227 1518-1743(2376)
19 cd08291 ETR_like_1 2-enoyl thi 100.0 1.3E-28 2.8E-33 197.5 20.8 212 2-224 110-324 (324)
20 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.7E-28 3.8E-33 199.2 20.4 211 2-224 142-357 (358)
21 PLN02827 Alcohol dehydrogenase 100.0 5E-28 1.1E-32 197.6 21.9 212 2-226 159-377 (378)
22 PLN02586 probable cinnamyl alc 100.0 4.7E-28 1E-32 196.6 20.3 204 2-226 149-354 (360)
23 TIGR03201 dearomat_had 6-hydro 100.0 1.3E-27 2.9E-32 193.4 21.4 208 2-225 127-349 (349)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 8.8E-28 1.9E-32 192.8 20.0 196 2-223 132-328 (329)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.2E-27 2.6E-32 195.0 21.0 203 2-225 143-348 (375)
26 PRK10309 galactitol-1-phosphat 100.0 1.2E-27 2.5E-32 193.7 20.1 213 2-225 128-346 (347)
27 PLN02514 cinnamyl-alcohol dehy 100.0 2.8E-27 6E-32 192.0 21.9 206 2-227 146-352 (357)
28 cd08292 ETR_like_2 2-enoyl thi 100.0 2.9E-27 6.3E-32 189.5 21.8 213 2-224 106-324 (324)
29 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.7E-27 8E-32 192.0 21.8 212 2-225 151-368 (368)
30 PLN02740 Alcohol dehydrogenase 100.0 2.5E-27 5.4E-32 193.9 20.7 211 2-224 164-380 (381)
31 cd08300 alcohol_DH_class_III c 100.0 5.8E-27 1.3E-31 191.0 21.5 211 2-224 152-368 (368)
32 KOG0022 Alcohol dehydrogenase, 100.0 2.4E-27 5.3E-32 179.7 16.6 211 2-224 158-374 (375)
33 cd08301 alcohol_DH_plants Plan 100.0 1.1E-26 2.4E-31 189.4 21.5 210 2-223 153-368 (369)
34 cd08233 butanediol_DH_like (2R 100.0 1.6E-26 3.5E-31 187.3 21.2 204 2-223 140-350 (351)
35 cd08277 liver_alcohol_DH_like 100.0 2.1E-26 4.5E-31 187.5 21.9 210 2-224 150-365 (365)
36 cd08244 MDR_enoyl_red Possible 100.0 4.3E-26 9.3E-31 182.7 22.6 214 2-225 109-324 (324)
37 cd08246 crotonyl_coA_red croto 100.0 2.6E-26 5.7E-31 188.7 21.2 210 2-224 157-392 (393)
38 KOG0025 Zn2+-binding dehydroge 99.9 1.1E-26 2.4E-31 174.1 16.3 216 2-225 126-352 (354)
39 cd08238 sorbose_phosphate_red 99.9 6.5E-26 1.4E-30 187.1 21.4 212 2-226 131-369 (410)
40 cd08231 MDR_TM0436_like Hypoth 99.9 5E-26 1.1E-30 185.1 20.3 210 2-225 143-361 (361)
41 cd05282 ETR_like 2-enoyl thioe 99.9 1.1E-25 2.3E-30 180.4 21.8 214 2-224 104-323 (323)
42 cd08296 CAD_like Cinnamyl alco 99.9 9.3E-26 2E-30 181.6 21.1 203 2-224 130-333 (333)
43 cd08274 MDR9 Medium chain dehy 99.9 9.8E-26 2.1E-30 182.6 21.3 206 2-225 144-350 (350)
44 cd05288 PGDH Prostaglandin deh 99.9 2.1E-25 4.6E-30 179.2 22.3 219 2-223 108-329 (329)
45 TIGR01751 crot-CoA-red crotony 99.9 2E-25 4.3E-30 183.7 22.2 212 2-226 153-388 (398)
46 COG1063 Tdh Threonine dehydrog 99.9 1.2E-25 2.5E-30 181.3 20.2 204 7-225 139-350 (350)
47 PTZ00354 alcohol dehydrogenase 99.9 4E-25 8.6E-30 177.8 23.1 218 2-227 106-330 (334)
48 cd08290 ETR 2-enoyl thioester 99.9 2.8E-25 6.1E-30 179.4 21.2 216 2-225 112-341 (341)
49 cd08243 quinone_oxidoreductase 99.9 5.8E-25 1.3E-29 175.7 21.7 210 2-223 108-319 (320)
50 cd05286 QOR2 Quinone oxidoredu 99.9 1.2E-24 2.6E-29 173.5 23.1 215 2-225 102-320 (320)
51 cd08297 CAD3 Cinnamyl alcohol 99.9 6.7E-25 1.4E-29 177.2 21.6 208 2-225 132-341 (341)
52 cd08263 Zn_ADH10 Alcohol dehyd 99.9 6.3E-25 1.4E-29 179.0 20.5 210 2-224 153-367 (367)
53 cd08289 MDR_yhfp_like Yhfp put 99.9 9E-25 2E-29 175.3 21.0 214 2-225 109-326 (326)
54 TIGR02819 fdhA_non_GSH formald 99.9 1E-24 2.2E-29 178.7 21.1 214 2-226 148-391 (393)
55 cd05284 arabinose_DH_like D-ar 99.9 1.2E-24 2.6E-29 175.6 21.1 205 2-225 132-340 (340)
56 PRK10754 quinone oxidoreductas 99.9 2.2E-24 4.7E-29 173.2 22.3 215 2-225 106-327 (327)
57 cd05280 MDR_yhdh_yhfp Yhdh and 99.9 1.3E-24 2.9E-29 174.2 20.8 213 2-225 109-325 (325)
58 cd08230 glucose_DH Glucose deh 99.9 5.4E-25 1.2E-29 178.6 18.6 202 2-225 134-355 (355)
59 cd08237 ribitol-5-phosphate_DH 99.9 6.7E-25 1.5E-29 177.0 19.0 196 2-226 128-340 (341)
60 cd08285 NADP_ADH NADP(H)-depen 99.9 1E-24 2.2E-29 176.8 20.1 210 2-225 133-351 (351)
61 TIGR03366 HpnZ_proposed putati 99.9 5.7E-25 1.2E-29 172.9 17.8 187 2-205 87-280 (280)
62 cd08260 Zn_ADH6 Alcohol dehydr 99.9 2.7E-24 5.8E-29 174.0 22.0 210 2-224 131-344 (345)
63 TIGR02817 adh_fam_1 zinc-bindi 99.9 2.5E-24 5.3E-29 173.5 21.5 209 2-224 109-334 (336)
64 cd08240 6_hydroxyhexanoate_dh_ 99.9 2E-24 4.4E-29 175.0 21.2 208 2-225 141-350 (350)
65 cd08278 benzyl_alcohol_DH Benz 99.9 1.9E-24 4.1E-29 176.1 20.8 211 2-224 152-365 (365)
66 TIGR02823 oxido_YhdH putative 99.9 3.4E-24 7.3E-29 171.8 21.7 212 2-225 108-323 (323)
67 cd08270 MDR4 Medium chain dehy 99.9 4.4E-24 9.4E-29 169.8 21.1 205 2-225 99-305 (305)
68 cd08250 Mgc45594_like Mgc45594 99.9 7.4E-24 1.6E-28 170.2 22.2 216 2-224 107-329 (329)
69 cd08254 hydroxyacyl_CoA_DH 6-h 99.9 6.8E-24 1.5E-28 171.0 21.1 206 2-225 131-338 (338)
70 cd08276 MDR7 Medium chain dehy 99.9 9.6E-24 2.1E-28 169.8 21.9 208 2-224 126-335 (336)
71 cd08283 FDH_like_1 Glutathione 99.9 7E-24 1.5E-28 173.9 21.0 209 2-225 151-386 (386)
72 PRK09422 ethanol-active dehydr 99.9 9.4E-24 2E-28 170.3 21.2 207 2-226 129-337 (338)
73 PRK13771 putative alcohol dehy 99.9 8.6E-24 1.9E-28 170.2 20.3 205 2-225 129-333 (334)
74 cd08253 zeta_crystallin Zeta-c 99.9 2.9E-23 6.2E-28 166.0 22.8 214 2-225 110-325 (325)
75 cd08284 FDH_like_2 Glutathione 99.9 1.3E-23 2.9E-28 169.8 20.9 205 2-224 134-343 (344)
76 cd08261 Zn_ADH7 Alcohol dehydr 99.9 1.8E-23 3.9E-28 168.6 21.6 206 2-225 127-337 (337)
77 cd08251 polyketide_synthase po 99.9 2.1E-23 4.6E-28 165.3 21.6 212 2-223 87-303 (303)
78 cd08286 FDH_like_ADH2 formalde 99.9 2.1E-23 4.5E-28 168.8 21.4 207 2-225 132-345 (345)
79 cd08266 Zn_ADH_like1 Alcohol d 99.9 3.3E-23 7.2E-28 166.9 22.5 210 2-225 132-342 (342)
80 TIGR02824 quinone_pig3 putativ 99.9 6.3E-23 1.4E-27 164.1 23.2 215 2-225 105-325 (325)
81 cd05276 p53_inducible_oxidored 99.9 5.7E-23 1.2E-27 164.0 22.8 213 2-223 105-323 (323)
82 cd05278 FDH_like Formaldehyde 99.9 1.2E-23 2.5E-28 170.3 19.0 208 2-225 134-347 (347)
83 TIGR01202 bchC 2-desacetyl-2-h 99.9 8.9E-24 1.9E-28 168.2 17.8 191 2-224 114-308 (308)
84 cd08235 iditol_2_DH_like L-idi 99.9 2.7E-23 5.8E-28 167.9 20.8 206 2-224 133-343 (343)
85 cd05283 CAD1 Cinnamyl alcohol 99.9 1.8E-23 4E-28 168.6 19.7 201 2-224 136-337 (337)
86 cd08249 enoyl_reductase_like e 99.9 1.1E-23 2.5E-28 169.9 18.4 207 2-225 110-339 (339)
87 cd08256 Zn_ADH2 Alcohol dehydr 99.9 2.2E-23 4.7E-28 169.0 19.7 203 2-223 142-350 (350)
88 cd05279 Zn_ADH1 Liver alcohol 99.9 4.5E-23 9.8E-28 168.0 20.9 210 2-223 149-364 (365)
89 cd05285 sorbitol_DH Sorbitol d 99.9 5E-23 1.1E-27 166.4 20.6 203 2-223 130-341 (343)
90 cd05195 enoyl_red enoyl reduct 99.9 8E-23 1.7E-27 160.8 21.3 213 2-223 74-293 (293)
91 smart00829 PKS_ER Enoylreducta 99.9 7.3E-23 1.6E-27 160.9 20.7 213 2-223 70-288 (288)
92 cd08259 Zn_ADH5 Alcohol dehydr 99.9 7.3E-23 1.6E-27 164.5 20.8 204 2-224 129-332 (332)
93 PRK10083 putative oxidoreducta 99.9 8.1E-23 1.7E-27 164.9 21.1 205 2-227 128-339 (339)
94 cd08279 Zn_ADH_class_III Class 99.9 7.9E-23 1.7E-27 166.5 20.8 210 2-222 148-362 (363)
95 cd08262 Zn_ADH8 Alcohol dehydr 99.9 7.9E-23 1.7E-27 165.1 20.6 205 2-224 129-341 (341)
96 cd08241 QOR1 Quinone oxidoredu 99.9 2E-22 4.4E-27 160.9 22.2 214 2-224 105-323 (323)
97 cd08282 PFDH_like Pseudomonas 99.9 9.9E-23 2.1E-27 166.5 20.6 212 2-225 140-375 (375)
98 cd08236 sugar_DH NAD(P)-depend 99.9 1.1E-22 2.4E-27 164.4 20.3 211 2-223 127-343 (343)
99 cd08268 MDR2 Medium chain dehy 99.9 3.8E-22 8.3E-27 159.7 22.9 215 2-225 110-328 (328)
100 cd08288 MDR_yhdh Yhdh putative 99.9 2.5E-22 5.5E-27 161.0 21.7 212 2-225 109-324 (324)
101 cd08252 AL_MDR Arginate lyase 99.9 1.7E-22 3.6E-27 162.8 20.7 210 2-224 110-336 (336)
102 cd08269 Zn_ADH9 Alcohol dehydr 99.9 2.1E-22 4.6E-27 160.6 20.9 208 2-223 98-311 (312)
103 cd08265 Zn_ADH3 Alcohol dehydr 99.9 2.4E-22 5.3E-27 164.7 20.7 208 2-223 162-383 (384)
104 cd08299 alcohol_DH_class_I_II_ 99.9 3.4E-22 7.3E-27 163.2 21.2 213 1-225 155-373 (373)
105 cd08272 MDR6 Medium chain dehy 99.9 7.4E-22 1.6E-26 158.1 22.0 209 2-225 110-326 (326)
106 cd08264 Zn_ADH_like2 Alcohol d 99.9 3.5E-22 7.6E-27 160.3 19.5 196 2-221 129-324 (325)
107 TIGR00692 tdh L-threonine 3-de 99.9 7.4E-22 1.6E-26 159.4 20.4 206 2-225 130-340 (340)
108 cd08287 FDH_like_ADH3 formalde 99.9 9.6E-22 2.1E-26 159.0 21.0 207 2-225 130-345 (345)
109 cd08247 AST1_like AST1 is a cy 99.9 5.4E-22 1.2E-26 160.9 19.0 219 2-225 116-352 (352)
110 PRK05396 tdh L-threonine 3-deh 99.9 9.3E-22 2E-26 158.9 20.1 206 2-226 132-341 (341)
111 cd08271 MDR5 Medium chain dehy 99.9 2E-21 4.4E-26 155.6 21.5 210 2-225 107-325 (325)
112 cd08273 MDR8 Medium chain dehy 99.9 1.1E-21 2.5E-26 157.6 19.9 212 2-223 105-330 (331)
113 cd08234 threonine_DH_like L-th 99.9 1.8E-21 3.8E-26 156.8 21.0 203 2-223 127-333 (334)
114 cd05281 TDH Threonine dehydrog 99.9 1.3E-21 2.8E-26 158.0 20.0 205 2-225 132-341 (341)
115 cd08232 idonate-5-DH L-idonate 99.9 2E-21 4.2E-26 156.9 20.5 201 2-225 133-339 (339)
116 cd08248 RTN4I1 Human Reticulon 99.9 9.3E-22 2E-26 159.4 18.1 216 2-224 124-350 (350)
117 cd08242 MDR_like Medium chain 99.9 1.2E-21 2.5E-26 156.9 18.2 194 2-225 123-319 (319)
118 cd08275 MDR3 Medium chain dehy 99.9 7.9E-21 1.7E-25 152.9 22.6 219 2-225 104-337 (337)
119 PLN02702 L-idonate 5-dehydroge 99.9 6.1E-21 1.3E-25 155.5 21.7 204 2-224 149-363 (364)
120 cd08245 CAD Cinnamyl alcohol d 99.9 3.6E-21 7.7E-26 154.8 19.9 201 2-223 129-330 (330)
121 cd08298 CAD2 Cinnamyl alcohol 99.9 3.9E-21 8.6E-26 154.5 18.9 195 2-223 134-329 (329)
122 cd05289 MDR_like_2 alcohol deh 99.9 9E-21 2E-25 150.6 18.5 199 2-223 110-309 (309)
123 cd08267 MDR1 Medium chain dehy 99.9 6.8E-21 1.5E-25 152.2 17.1 206 2-223 109-319 (319)
124 cd08255 2-desacetyl-2-hydroxye 99.9 1E-20 2.3E-25 148.5 17.9 202 2-223 65-277 (277)
125 PF00107 ADH_zinc_N: Zinc-bind 99.9 1.7E-20 3.6E-25 130.9 13.7 128 50-189 1-130 (130)
126 cd08258 Zn_ADH4 Alcohol dehydr 99.9 8.3E-20 1.8E-24 145.4 19.2 172 2-190 131-306 (306)
127 cd05188 MDR Medium chain reduc 99.8 2.2E-19 4.8E-24 140.1 17.7 169 2-186 100-270 (271)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 1.1E-16 2.4E-21 111.1 6.7 122 83-223 1-127 (127)
129 cd00401 AdoHcyase S-adenosyl-L 99.6 1E-13 2.2E-18 112.8 14.9 176 25-226 187-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.6 7.7E-14 1.7E-18 116.3 14.2 150 36-195 162-335 (509)
131 PRK11873 arsM arsenite S-adeno 99.0 1.2E-08 2.6E-13 80.0 11.9 171 33-223 72-259 (272)
132 TIGR00561 pntA NAD(P) transhyd 98.9 9.3E-09 2E-13 86.0 10.9 108 37-146 162-292 (511)
133 COG4221 Short-chain alcohol de 98.8 5.1E-08 1.1E-12 73.1 8.9 106 38-143 5-144 (246)
134 TIGR00518 alaDH alanine dehydr 98.7 4.4E-07 9.6E-12 74.0 13.1 102 39-146 167-275 (370)
135 COG3967 DltE Short-chain dehyd 98.6 2.5E-07 5.3E-12 67.5 8.3 79 38-117 4-87 (245)
136 PRK05476 S-adenosyl-L-homocyst 98.6 7.2E-07 1.6E-11 73.4 12.0 104 24-141 196-302 (425)
137 PRK08306 dipicolinate synthase 98.6 1.6E-06 3.4E-11 68.7 12.9 94 38-142 151-245 (296)
138 TIGR00936 ahcY adenosylhomocys 98.6 1.6E-06 3.4E-11 71.0 12.3 101 26-140 181-284 (406)
139 COG0300 DltE Short-chain dehyd 98.5 9.6E-07 2.1E-11 68.0 9.4 82 36-118 3-94 (265)
140 PLN02494 adenosylhomocysteinas 98.5 2.4E-06 5.3E-11 70.7 11.8 101 26-140 240-343 (477)
141 PRK05786 fabG 3-ketoacyl-(acyl 98.5 2.4E-06 5.2E-11 65.5 10.3 104 38-141 4-138 (238)
142 PRK05693 short chain dehydroge 98.5 3.8E-06 8.3E-11 65.8 11.6 77 40-117 2-81 (274)
143 PRK08324 short chain dehydroge 98.4 2.4E-06 5.2E-11 75.4 11.3 104 38-141 421-560 (681)
144 PRK05993 short chain dehydroge 98.4 5.5E-06 1.2E-10 65.1 12.2 104 38-142 3-138 (277)
145 PRK12742 oxidoreductase; Provi 98.4 5.1E-06 1.1E-10 63.6 11.6 103 38-142 5-135 (237)
146 cd05213 NAD_bind_Glutamyl_tRNA 98.4 1.5E-06 3.2E-11 69.5 8.8 105 3-120 142-250 (311)
147 COG2518 Pcm Protein-L-isoaspar 98.4 4.6E-06 9.9E-11 61.6 9.9 109 19-138 55-169 (209)
148 PRK06182 short chain dehydroge 98.4 5.4E-06 1.2E-10 65.0 10.8 79 38-117 2-83 (273)
149 KOG1205 Predicted dehydrogenas 98.4 3.5E-06 7.6E-11 65.4 9.0 106 38-143 11-154 (282)
150 PRK08265 short chain dehydroge 98.4 8E-06 1.7E-10 63.6 11.2 104 38-141 5-139 (261)
151 PF01488 Shikimate_DH: Shikima 98.3 6.5E-06 1.4E-10 57.5 8.9 94 37-139 10-110 (135)
152 PF12847 Methyltransf_18: Meth 98.3 5.9E-06 1.3E-10 55.6 8.2 95 38-137 1-110 (112)
153 PRK08339 short chain dehydroge 98.3 1.5E-05 3.4E-10 62.1 11.2 105 38-142 7-147 (263)
154 TIGR02853 spore_dpaA dipicolin 98.3 3.3E-05 7.1E-10 60.9 12.9 112 20-142 128-244 (287)
155 PRK05872 short chain dehydroge 98.3 8.1E-06 1.7E-10 64.8 9.6 81 38-118 8-95 (296)
156 PRK00045 hemA glutamyl-tRNA re 98.2 9.6E-06 2.1E-10 67.6 10.0 89 21-119 161-253 (423)
157 PRK07109 short chain dehydroge 98.2 2.3E-05 5E-10 63.3 11.6 105 38-142 7-147 (334)
158 PRK11705 cyclopropane fatty ac 98.2 3E-05 6.4E-10 63.7 11.8 113 17-138 146-267 (383)
159 PTZ00075 Adenosylhomocysteinas 98.2 2.8E-05 6.1E-10 64.7 11.2 99 28-140 242-343 (476)
160 PRK06500 short chain dehydroge 98.2 3.9E-05 8.5E-10 59.1 11.5 80 38-117 5-89 (249)
161 PRK06200 2,3-dihydroxy-2,3-dih 98.2 1.5E-05 3.3E-10 62.0 9.1 80 38-117 5-89 (263)
162 PRK12829 short chain dehydroge 98.2 3.5E-05 7.5E-10 59.9 11.0 83 36-118 8-96 (264)
163 PRK08261 fabG 3-ketoacyl-(acyl 98.2 4.8E-05 1E-09 64.1 12.5 105 37-141 208-345 (450)
164 PRK06057 short chain dehydroge 98.2 1.8E-05 3.9E-10 61.3 9.3 80 38-117 6-88 (255)
165 PRK06484 short chain dehydroge 98.2 2.6E-05 5.6E-10 66.9 11.0 105 38-142 268-404 (520)
166 PRK09186 flagellin modificatio 98.2 4.5E-05 9.8E-10 59.0 11.5 80 38-117 3-92 (256)
167 PRK08415 enoyl-(acyl carrier p 98.1 4.5E-05 9.8E-10 59.9 11.3 104 38-141 4-146 (274)
168 PRK06484 short chain dehydroge 98.1 4.2E-05 9.2E-10 65.6 11.6 81 38-118 4-89 (520)
169 PF02353 CMAS: Mycolic acid cy 98.1 1.8E-05 3.9E-10 61.8 8.5 104 27-138 51-166 (273)
170 PRK07326 short chain dehydroge 98.1 4.6E-05 9.9E-10 58.3 10.6 80 38-117 5-91 (237)
171 PRK06139 short chain dehydroge 98.1 1.7E-05 3.8E-10 63.9 8.6 80 38-117 6-93 (330)
172 PRK07806 short chain dehydroge 98.1 6.3E-05 1.4E-09 58.0 11.4 103 38-140 5-136 (248)
173 KOG1209 1-Acyl dihydroxyaceton 98.1 5.8E-05 1.3E-09 55.7 10.3 105 38-142 6-142 (289)
174 PRK07825 short chain dehydroge 98.1 2.3E-05 5E-10 61.4 9.1 80 38-117 4-87 (273)
175 TIGR03325 BphB_TodD cis-2,3-di 98.1 2.2E-05 4.7E-10 61.2 8.9 80 38-117 4-88 (262)
176 PRK08267 short chain dehydroge 98.1 4.5E-05 9.7E-10 59.3 10.5 79 40-118 2-87 (260)
177 PRK07060 short chain dehydroge 98.1 4.1E-05 8.9E-10 58.8 10.1 78 38-117 8-86 (245)
178 PLN03209 translocon at the inn 98.1 6.1E-05 1.3E-09 64.3 11.5 105 32-141 73-210 (576)
179 PRK12939 short chain dehydroge 98.1 5.1E-05 1.1E-09 58.4 10.4 81 38-118 6-94 (250)
180 PRK06079 enoyl-(acyl carrier p 98.1 6.9E-05 1.5E-09 58.1 11.1 104 38-142 6-147 (252)
181 PRK12828 short chain dehydroge 98.1 7.7E-05 1.7E-09 57.0 11.3 80 38-117 6-91 (239)
182 COG0686 Ald Alanine dehydrogen 98.1 7E-05 1.5E-09 58.3 10.4 105 37-148 167-278 (371)
183 PRK08017 oxidoreductase; Provi 98.1 3.4E-05 7.3E-10 59.7 9.0 77 40-117 3-83 (256)
184 PRK07576 short chain dehydroge 98.1 3E-05 6.5E-10 60.5 8.7 80 38-117 8-95 (264)
185 PRK06196 oxidoreductase; Provi 98.0 3.9E-05 8.5E-10 61.5 9.5 80 38-117 25-108 (315)
186 COG2230 Cfa Cyclopropane fatty 98.0 9.9E-05 2.1E-09 57.4 11.1 112 22-141 56-179 (283)
187 PRK07832 short chain dehydroge 98.0 9.9E-05 2.2E-09 57.8 11.5 78 41-118 2-88 (272)
188 PRK07062 short chain dehydroge 98.0 3.6E-05 7.9E-10 60.0 8.9 80 38-117 7-96 (265)
189 PLN02780 ketoreductase/ oxidor 98.0 4.9E-05 1.1E-09 61.1 9.7 80 38-117 52-141 (320)
190 PRK12823 benD 1,6-dihydroxycyc 98.0 0.00012 2.5E-09 56.9 11.6 79 38-117 7-93 (260)
191 PRK07063 short chain dehydroge 98.0 3.4E-05 7.3E-10 60.0 8.5 80 38-117 6-95 (260)
192 PRK00377 cbiT cobalt-precorrin 98.0 0.00015 3.2E-09 54.2 11.5 100 32-136 34-143 (198)
193 PRK05854 short chain dehydroge 98.0 4.1E-05 8.8E-10 61.3 9.0 80 38-117 13-102 (313)
194 PRK05867 short chain dehydroge 98.0 3.7E-05 8.1E-10 59.5 8.4 80 38-117 8-95 (253)
195 PRK08177 short chain dehydroge 98.0 4.4E-05 9.6E-10 58.0 8.6 77 40-117 2-80 (225)
196 PRK05866 short chain dehydroge 98.0 3.6E-05 7.9E-10 61.0 8.4 81 38-118 39-127 (293)
197 PRK06180 short chain dehydroge 98.0 5E-05 1.1E-09 59.7 8.9 81 38-118 3-88 (277)
198 PRK07831 short chain dehydroge 98.0 6.7E-05 1.4E-09 58.4 9.5 82 36-117 14-106 (262)
199 PRK07814 short chain dehydroge 98.0 5.1E-05 1.1E-09 59.1 8.8 80 38-117 9-96 (263)
200 KOG1201 Hydroxysteroid 17-beta 98.0 3.9E-05 8.3E-10 59.5 7.8 80 37-117 36-123 (300)
201 PRK06128 oxidoreductase; Provi 98.0 0.00011 2.4E-09 58.5 10.8 104 38-142 54-195 (300)
202 PRK07533 enoyl-(acyl carrier p 98.0 0.00014 3.1E-09 56.5 11.2 104 38-141 9-151 (258)
203 PRK06841 short chain dehydroge 98.0 6.6E-05 1.4E-09 58.1 9.2 80 38-118 14-99 (255)
204 PRK07231 fabG 3-ketoacyl-(acyl 98.0 5.3E-05 1.1E-09 58.4 8.7 81 38-118 4-91 (251)
205 PRK07890 short chain dehydroge 98.0 4.8E-05 1E-09 58.9 8.4 81 37-117 3-91 (258)
206 PRK07453 protochlorophyllide o 98.0 8.1E-05 1.7E-09 59.8 9.8 80 38-117 5-92 (322)
207 PRK05876 short chain dehydroge 98.0 5.9E-05 1.3E-09 59.2 8.9 80 38-117 5-92 (275)
208 PRK05717 oxidoreductase; Valid 97.9 7.6E-05 1.7E-09 57.8 9.2 80 38-117 9-93 (255)
209 PRK06949 short chain dehydroge 97.9 6E-05 1.3E-09 58.4 8.6 81 37-117 7-95 (258)
210 PRK07523 gluconate 5-dehydroge 97.9 6.9E-05 1.5E-09 58.0 8.9 81 38-118 9-97 (255)
211 PRK07478 short chain dehydroge 97.9 7E-05 1.5E-09 58.0 8.9 80 38-117 5-92 (254)
212 PRK12771 putative glutamate sy 97.9 8.7E-06 1.9E-10 70.4 4.2 79 35-119 133-233 (564)
213 COG2226 UbiE Methylase involve 97.9 0.00014 3E-09 55.4 10.0 105 32-141 45-159 (238)
214 PRK00517 prmA ribosomal protei 97.9 0.00025 5.4E-09 54.9 11.6 90 36-140 117-215 (250)
215 PRK06194 hypothetical protein; 97.9 8.6E-05 1.9E-09 58.6 9.2 81 38-118 5-93 (287)
216 PRK07024 short chain dehydroge 97.9 0.00011 2.4E-09 57.0 9.6 79 39-117 2-87 (257)
217 PF13460 NAD_binding_10: NADH( 97.9 0.00023 4.9E-09 52.2 10.7 92 42-141 1-100 (183)
218 COG4122 Predicted O-methyltran 97.9 0.00031 6.7E-09 52.7 11.3 104 32-138 53-166 (219)
219 PF01135 PCMT: Protein-L-isoas 97.9 8E-05 1.7E-09 55.8 8.2 99 32-137 66-171 (209)
220 PRK07677 short chain dehydroge 97.9 7.8E-05 1.7E-09 57.7 8.3 79 39-117 1-87 (252)
221 PLN02253 xanthoxin dehydrogena 97.9 0.00011 2.3E-09 57.8 9.2 80 38-117 17-103 (280)
222 PRK08217 fabG 3-ketoacyl-(acyl 97.9 0.00013 2.8E-09 56.3 9.5 80 38-117 4-91 (253)
223 PRK06197 short chain dehydroge 97.9 9E-05 1.9E-09 59.1 8.8 80 38-117 15-104 (306)
224 PRK08594 enoyl-(acyl carrier p 97.9 0.00034 7.3E-09 54.4 11.8 105 38-142 6-151 (257)
225 PRK13942 protein-L-isoaspartat 97.9 0.00027 5.9E-09 53.3 10.9 99 32-137 70-175 (212)
226 COG2242 CobL Precorrin-6B meth 97.9 0.00032 7E-09 50.9 10.6 101 32-138 28-135 (187)
227 cd01078 NAD_bind_H4MPT_DH NADP 97.9 0.00043 9.3E-09 51.5 11.6 79 37-120 26-109 (194)
228 KOG0725 Reductases with broad 97.9 0.00011 2.3E-09 57.5 8.6 82 37-118 6-99 (270)
229 PRK06953 short chain dehydroge 97.9 0.00016 3.5E-09 54.8 9.5 78 40-118 2-80 (222)
230 PRK08340 glucose-1-dehydrogena 97.9 0.00011 2.5E-09 57.0 8.8 77 41-117 2-85 (259)
231 PRK05884 short chain dehydroge 97.9 0.00015 3.2E-09 55.2 9.2 76 41-117 2-78 (223)
232 PRK08643 acetoin reductase; Va 97.9 0.00011 2.4E-09 56.9 8.7 79 39-117 2-88 (256)
233 PRK08862 short chain dehydroge 97.9 0.00012 2.7E-09 55.8 8.7 80 38-117 4-92 (227)
234 PRK08589 short chain dehydroge 97.9 0.0001 2.2E-09 57.7 8.5 79 38-117 5-91 (272)
235 TIGR01035 hemA glutamyl-tRNA r 97.9 0.00044 9.6E-09 57.6 12.5 76 34-119 175-251 (417)
236 PRK07774 short chain dehydroge 97.8 0.00012 2.6E-09 56.4 8.7 80 38-117 5-92 (250)
237 PF02826 2-Hacid_dh_C: D-isome 97.8 0.00012 2.7E-09 53.6 8.3 89 37-139 34-128 (178)
238 PRK09242 tropinone reductase; 97.8 0.00012 2.7E-09 56.7 8.7 81 38-118 8-98 (257)
239 TIGR01832 kduD 2-deoxy-D-gluco 97.8 0.00013 2.8E-09 56.2 8.6 79 38-117 4-89 (248)
240 PRK06505 enoyl-(acyl carrier p 97.8 0.00016 3.4E-09 56.8 9.2 80 38-117 6-94 (271)
241 PRK07067 sorbitol dehydrogenas 97.8 0.00015 3.2E-09 56.3 8.9 80 38-117 5-89 (257)
242 PRK09291 short chain dehydroge 97.8 0.00016 3.5E-09 55.9 9.2 75 39-117 2-82 (257)
243 PRK13943 protein-L-isoaspartat 97.8 0.0004 8.7E-09 55.6 11.4 100 32-137 74-179 (322)
244 PRK07370 enoyl-(acyl carrier p 97.8 0.00023 5E-09 55.4 9.9 105 38-142 5-151 (258)
245 PRK09072 short chain dehydroge 97.8 0.00024 5.1E-09 55.4 10.0 81 38-118 4-90 (263)
246 PRK06482 short chain dehydroge 97.8 0.00017 3.7E-09 56.5 9.2 78 40-117 3-85 (276)
247 PRK10538 malonic semialdehyde 97.8 0.00017 3.6E-09 55.7 9.0 77 41-117 2-83 (248)
248 PRK08085 gluconate 5-dehydroge 97.8 0.00016 3.6E-09 55.9 8.9 80 38-117 8-95 (254)
249 PRK07904 short chain dehydroge 97.8 0.00018 3.9E-09 55.8 9.0 83 36-118 5-97 (253)
250 PRK08251 short chain dehydroge 97.8 0.00017 3.8E-09 55.5 8.8 79 39-117 2-90 (248)
251 PRK06138 short chain dehydroge 97.8 0.00013 2.9E-09 56.2 8.1 81 38-118 4-91 (252)
252 PRK08159 enoyl-(acyl carrier p 97.8 0.00018 3.9E-09 56.4 8.9 107 35-141 6-151 (272)
253 PRK08213 gluconate 5-dehydroge 97.8 0.00018 3.9E-09 55.8 8.9 80 38-117 11-98 (259)
254 PRK06483 dihydromonapterin red 97.8 0.00018 3.9E-09 55.0 8.8 78 39-117 2-83 (236)
255 TIGR01289 LPOR light-dependent 97.8 0.00025 5.5E-09 56.8 9.9 79 39-117 3-90 (314)
256 PRK07985 oxidoreductase; Provi 97.8 0.00031 6.6E-09 55.8 10.3 105 38-142 48-189 (294)
257 PRK06179 short chain dehydroge 97.8 6.6E-05 1.4E-09 58.7 6.4 78 38-118 3-83 (270)
258 PRK06603 enoyl-(acyl carrier p 97.8 0.00021 4.6E-09 55.6 9.2 80 38-117 7-95 (260)
259 PRK12429 3-hydroxybutyrate deh 97.8 0.00023 5E-09 55.0 9.4 80 38-117 3-90 (258)
260 PRK06914 short chain dehydroge 97.8 0.00019 4.1E-09 56.4 9.0 80 38-118 2-91 (280)
261 PRK06172 short chain dehydroge 97.8 0.00016 3.5E-09 55.9 8.3 80 38-117 6-93 (253)
262 PRK08263 short chain dehydroge 97.8 0.00021 4.6E-09 56.0 9.1 80 39-118 3-87 (275)
263 PRK07035 short chain dehydroge 97.8 0.00019 4.1E-09 55.5 8.6 80 38-117 7-94 (252)
264 PRK06720 hypothetical protein; 97.8 0.00022 4.9E-09 51.7 8.4 80 38-117 15-102 (169)
265 PRK07454 short chain dehydroge 97.8 0.0002 4.4E-09 54.9 8.7 82 37-118 4-93 (241)
266 PRK07666 fabG 3-ketoacyl-(acyl 97.8 0.00019 4.1E-09 55.0 8.5 81 38-118 6-94 (239)
267 PRK05875 short chain dehydroge 97.8 0.00024 5.3E-09 55.6 9.3 80 38-117 6-95 (276)
268 PRK08703 short chain dehydroge 97.8 0.00015 3.3E-09 55.5 8.0 80 38-117 5-96 (239)
269 PRK07074 short chain dehydroge 97.8 0.00031 6.6E-09 54.5 9.6 79 39-117 2-86 (257)
270 PRK12481 2-deoxy-D-gluconate 3 97.8 0.00021 4.5E-09 55.3 8.6 79 38-117 7-92 (251)
271 PRK06181 short chain dehydroge 97.8 0.00019 4.1E-09 55.8 8.4 80 39-118 1-88 (263)
272 PRK08277 D-mannonate oxidoredu 97.7 0.00024 5.3E-09 55.7 8.9 80 38-117 9-96 (278)
273 PRK13394 3-hydroxybutyrate deh 97.7 0.00023 4.9E-09 55.3 8.6 81 38-118 6-94 (262)
274 PRK08261 fabG 3-ketoacyl-(acyl 97.7 5.9E-05 1.3E-09 63.5 5.7 95 33-142 28-127 (450)
275 PRK12937 short chain dehydroge 97.7 0.00074 1.6E-08 51.8 11.4 104 38-141 4-142 (245)
276 PRK13944 protein-L-isoaspartat 97.7 0.00049 1.1E-08 51.7 9.9 101 32-137 66-172 (205)
277 PRK12938 acetyacetyl-CoA reduc 97.7 0.00032 6.8E-09 54.0 9.1 81 38-118 2-91 (246)
278 PRK06398 aldose dehydrogenase; 97.7 6.8E-05 1.5E-09 58.3 5.4 75 38-117 5-81 (258)
279 PRK13940 glutamyl-tRNA reducta 97.7 0.00043 9.4E-09 57.4 10.3 79 32-119 174-253 (414)
280 PRK06125 short chain dehydroge 97.7 0.00025 5.4E-09 55.1 8.6 78 38-117 6-90 (259)
281 PRK06198 short chain dehydroge 97.7 0.00022 4.8E-09 55.3 8.3 82 37-118 4-94 (260)
282 PRK08628 short chain dehydroge 97.7 0.00019 4.2E-09 55.6 7.9 80 38-117 6-92 (258)
283 PRK07791 short chain dehydroge 97.7 0.00027 5.9E-09 55.8 8.8 82 37-118 4-102 (286)
284 PRK05653 fabG 3-ketoacyl-(acyl 97.7 0.00036 7.7E-09 53.5 9.1 81 38-118 4-92 (246)
285 PRK12936 3-ketoacyl-(acyl-carr 97.7 0.00035 7.5E-09 53.6 9.0 80 38-117 5-89 (245)
286 PF01262 AlaDh_PNT_C: Alanine 97.7 0.00029 6.2E-09 51.1 8.0 104 39-145 20-146 (168)
287 PLN02476 O-methyltransferase 97.7 0.0011 2.4E-08 51.7 11.6 105 30-137 110-227 (278)
288 COG2519 GCD14 tRNA(1-methylade 97.7 0.00076 1.6E-08 51.3 10.3 101 32-138 88-195 (256)
289 KOG1208 Dehydrogenases with di 97.7 0.00031 6.8E-09 56.0 8.8 105 37-141 33-173 (314)
290 KOG1210 Predicted 3-ketosphing 97.7 0.00038 8.2E-09 54.5 8.9 86 33-118 27-122 (331)
291 PRK07889 enoyl-(acyl carrier p 97.7 0.00029 6.3E-09 54.7 8.4 80 38-117 6-94 (256)
292 PRK06935 2-deoxy-D-gluconate 3 97.7 0.00023 5E-09 55.2 7.8 79 38-117 14-100 (258)
293 PRK07856 short chain dehydroge 97.7 0.00024 5.2E-09 54.9 7.8 75 38-117 5-84 (252)
294 PRK06114 short chain dehydroge 97.7 0.00031 6.7E-09 54.4 8.3 81 38-118 7-96 (254)
295 PRK06124 gluconate 5-dehydroge 97.7 0.00036 7.9E-09 54.0 8.7 81 38-118 10-98 (256)
296 PRK12367 short chain dehydroge 97.7 0.00042 9.2E-09 53.5 8.9 74 38-118 13-89 (245)
297 PRK00107 gidB 16S rRNA methylt 97.7 0.00094 2E-08 49.3 10.3 97 35-138 42-145 (187)
298 PRK08690 enoyl-(acyl carrier p 97.7 0.00031 6.8E-09 54.7 8.3 80 38-117 5-93 (261)
299 TIGR00406 prmA ribosomal prote 97.6 0.00041 8.8E-09 54.9 8.9 96 36-139 157-260 (288)
300 PRK06463 fabG 3-ketoacyl-(acyl 97.6 0.00038 8.3E-09 53.9 8.7 103 38-141 6-140 (255)
301 PRK12747 short chain dehydroge 97.6 0.00088 1.9E-08 51.7 10.7 105 38-142 3-148 (252)
302 PRK08945 putative oxoacyl-(acy 97.6 0.00043 9.2E-09 53.3 8.9 82 36-117 9-101 (247)
303 PLN02781 Probable caffeoyl-CoA 97.6 0.0013 2.8E-08 50.4 11.3 105 30-137 60-177 (234)
304 PRK07097 gluconate 5-dehydroge 97.6 0.00047 1E-08 53.7 9.2 81 38-118 9-97 (265)
305 KOG1014 17 beta-hydroxysteroid 97.6 0.00044 9.6E-09 54.0 8.7 81 37-118 47-136 (312)
306 PRK08226 short chain dehydroge 97.6 0.00047 1E-08 53.6 9.1 80 38-117 5-91 (263)
307 PRK06113 7-alpha-hydroxysteroi 97.6 0.00041 8.9E-09 53.7 8.7 80 38-117 10-97 (255)
308 PRK07984 enoyl-(acyl carrier p 97.6 0.00045 9.7E-09 53.9 8.9 80 38-117 5-93 (262)
309 PRK08416 7-alpha-hydroxysteroi 97.6 0.00045 9.8E-09 53.7 8.9 80 38-117 7-96 (260)
310 TIGR00080 pimt protein-L-isoas 97.6 0.0011 2.4E-08 50.1 10.7 100 32-137 71-176 (215)
311 PF00106 adh_short: short chai 97.6 0.00021 4.5E-09 51.5 6.5 78 40-117 1-89 (167)
312 PRK12826 3-ketoacyl-(acyl-carr 97.6 0.00041 8.9E-09 53.4 8.5 81 38-118 5-93 (251)
313 TIGR00438 rrmJ cell division p 97.6 0.0012 2.5E-08 48.9 10.5 98 33-138 27-146 (188)
314 PRK08303 short chain dehydroge 97.6 0.00045 9.7E-09 55.2 8.8 79 38-116 7-103 (305)
315 PRK06077 fabG 3-ketoacyl-(acyl 97.6 0.0015 3.2E-08 50.4 11.4 104 38-142 5-144 (252)
316 TIGR03206 benzo_BadH 2-hydroxy 97.6 0.00049 1.1E-08 53.0 8.7 80 38-117 2-89 (250)
317 PRK06997 enoyl-(acyl carrier p 97.6 0.00038 8.2E-09 54.2 8.1 80 38-117 5-93 (260)
318 PRK08993 2-deoxy-D-gluconate 3 97.6 0.00046 1E-08 53.4 8.5 80 38-118 9-95 (253)
319 PRK06940 short chain dehydroge 97.6 0.0014 3.1E-08 51.4 11.3 101 39-141 2-128 (275)
320 PRK06101 short chain dehydroge 97.6 0.00087 1.9E-08 51.4 9.8 76 40-117 2-80 (240)
321 PRK07424 bifunctional sterol d 97.6 0.00059 1.3E-08 56.5 9.2 75 38-117 177-254 (406)
322 COG0373 HemA Glutamyl-tRNA red 97.6 0.0028 6.2E-08 52.1 12.8 78 32-119 171-249 (414)
323 PRK12384 sorbitol-6-phosphate 97.6 0.00046 9.9E-09 53.6 8.0 79 39-117 2-90 (259)
324 PRK08642 fabG 3-ketoacyl-(acyl 97.6 0.00074 1.6E-08 52.1 9.2 80 38-117 4-90 (253)
325 PF01596 Methyltransf_3: O-met 97.6 0.00066 1.4E-08 50.8 8.4 105 30-137 37-154 (205)
326 PRK05650 short chain dehydroge 97.6 0.00057 1.2E-08 53.4 8.5 78 41-118 2-87 (270)
327 PF08704 GCD14: tRNA methyltra 97.5 0.00078 1.7E-08 51.8 8.9 106 30-138 32-146 (247)
328 PRK07402 precorrin-6B methylas 97.5 0.0045 9.8E-08 46.0 12.9 102 32-138 34-142 (196)
329 TIGR02632 RhaD_aldol-ADH rhamn 97.5 0.00047 1E-08 61.0 8.8 81 38-118 413-503 (676)
330 PRK08220 2,3-dihydroxybenzoate 97.5 0.0011 2.5E-08 51.0 10.1 75 38-118 7-86 (252)
331 TIGR02469 CbiT precorrin-6Y C5 97.5 0.0024 5.3E-08 43.4 10.7 101 32-137 13-121 (124)
332 CHL00194 ycf39 Ycf39; Provisio 97.5 0.00078 1.7E-08 54.0 9.4 94 41-140 2-111 (317)
333 PTZ00098 phosphoethanolamine N 97.5 0.0014 3E-08 51.2 10.4 103 32-139 46-157 (263)
334 PRK07577 short chain dehydroge 97.5 0.00036 7.9E-09 53.2 7.1 75 38-118 2-78 (234)
335 PRK04148 hypothetical protein; 97.5 0.001 2.2E-08 46.0 8.4 86 35-130 13-100 (134)
336 PRK08063 enoyl-(acyl carrier p 97.5 0.00054 1.2E-08 52.8 8.0 80 38-117 3-91 (250)
337 KOG1610 Corticosteroid 11-beta 97.5 0.0043 9.2E-08 48.8 12.7 107 37-143 27-169 (322)
338 PRK00811 spermidine synthase; 97.5 0.0015 3.3E-08 51.5 10.5 97 37-137 75-190 (283)
339 COG0169 AroE Shikimate 5-dehyd 97.5 0.0011 2.4E-08 52.0 9.5 85 23-118 108-200 (283)
340 PRK07775 short chain dehydroge 97.5 0.001 2.3E-08 52.1 9.6 81 38-118 9-97 (274)
341 PRK12743 oxidoreductase; Provi 97.5 0.00069 1.5E-08 52.5 8.4 79 39-117 2-89 (256)
342 TIGR01963 PHB_DH 3-hydroxybuty 97.5 0.00067 1.4E-08 52.4 8.3 79 39-117 1-87 (255)
343 PLN02366 spermidine synthase 97.5 0.0016 3.6E-08 51.8 10.5 99 36-137 89-205 (308)
344 PLN02589 caffeoyl-CoA O-methyl 97.5 0.0031 6.8E-08 48.6 11.5 104 30-136 71-188 (247)
345 PRK07069 short chain dehydroge 97.5 0.00065 1.4E-08 52.3 8.0 77 41-117 1-88 (251)
346 PRK11207 tellurite resistance 97.5 0.00093 2E-08 49.8 8.4 101 32-140 24-136 (197)
347 PRK06523 short chain dehydroge 97.5 0.00037 8E-09 54.1 6.5 76 38-117 8-86 (260)
348 PRK09135 pteridine reductase; 97.5 0.00091 2E-08 51.4 8.7 80 38-117 5-94 (249)
349 PRK05565 fabG 3-ketoacyl-(acyl 97.5 0.00075 1.6E-08 51.8 8.2 79 39-117 5-92 (247)
350 PRK05599 hypothetical protein; 97.5 0.00074 1.6E-08 52.1 8.0 76 41-117 2-86 (246)
351 PRK00258 aroE shikimate 5-dehy 97.5 0.0014 2.9E-08 51.7 9.5 109 22-138 105-221 (278)
352 PRK08278 short chain dehydroge 97.5 0.00076 1.7E-08 52.9 8.1 81 38-118 5-100 (273)
353 PRK09134 short chain dehydroge 97.4 0.0014 3E-08 50.9 9.4 80 38-117 8-96 (258)
354 PRK05855 short chain dehydroge 97.4 0.00066 1.4E-08 58.9 8.4 81 38-118 314-402 (582)
355 PLN02244 tocopherol O-methyltr 97.4 0.0016 3.5E-08 52.8 9.9 98 37-139 117-224 (340)
356 TIGR01829 AcAcCoA_reduct aceto 97.4 0.00088 1.9E-08 51.3 8.1 78 40-117 1-87 (242)
357 PLN00203 glutamyl-tRNA reducta 97.4 0.0048 1E-07 52.7 13.0 74 38-118 265-339 (519)
358 COG1748 LYS9 Saccharopine dehy 97.4 0.0011 2.5E-08 54.0 8.8 95 40-141 2-102 (389)
359 PF01209 Ubie_methyltran: ubiE 97.4 0.00021 4.6E-09 54.6 4.5 103 32-141 41-156 (233)
360 PRK08936 glucose-1-dehydrogena 97.4 0.0011 2.5E-08 51.4 8.7 81 38-118 6-95 (261)
361 PLN00015 protochlorophyllide r 97.4 0.001 2.3E-08 53.1 8.7 75 43-117 1-84 (308)
362 TIGR00507 aroE shikimate 5-deh 97.4 0.0044 9.5E-08 48.6 11.9 108 23-139 101-215 (270)
363 PRK07201 short chain dehydroge 97.4 0.0009 2E-08 59.1 9.0 80 38-117 370-457 (657)
364 KOG1200 Mitochondrial/plastidi 97.4 0.0014 3E-08 47.9 8.2 80 39-118 14-100 (256)
365 PLN00141 Tic62-NAD(P)-related 97.4 0.00097 2.1E-08 51.6 8.2 101 38-141 16-134 (251)
366 COG2227 UbiG 2-polyprenyl-3-me 97.4 0.0032 7E-08 47.6 10.4 95 38-139 59-162 (243)
367 PRK12550 shikimate 5-dehydroge 97.4 0.0024 5.1E-08 50.1 10.2 80 23-117 107-187 (272)
368 TIGR02415 23BDH acetoin reduct 97.4 0.0012 2.5E-08 51.0 8.5 79 40-118 1-87 (254)
369 PRK05557 fabG 3-ketoacyl-(acyl 97.4 0.0014 3E-08 50.2 8.9 81 38-118 4-93 (248)
370 PRK08264 short chain dehydroge 97.4 0.00078 1.7E-08 51.5 7.4 75 38-118 5-83 (238)
371 PRK06171 sorbitol-6-phosphate 97.4 0.00032 7E-09 54.6 5.3 76 38-117 8-86 (266)
372 PRK12746 short chain dehydroge 97.4 0.0014 3E-08 50.7 8.6 81 38-118 5-100 (254)
373 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0016 3.4E-08 46.5 8.0 91 35-139 19-111 (162)
374 PRK07102 short chain dehydroge 97.4 0.0019 4.1E-08 49.6 9.1 77 40-117 2-85 (243)
375 PRK12549 shikimate 5-dehydroge 97.3 0.0027 5.9E-08 50.1 10.0 86 23-117 111-201 (284)
376 COG2910 Putative NADH-flavin r 97.3 0.0012 2.5E-08 47.8 7.1 92 41-141 2-107 (211)
377 COG3288 PntA NAD/NADP transhyd 97.3 0.0033 7.2E-08 49.1 9.9 150 35-189 160-335 (356)
378 TIGR02622 CDP_4_6_dhtase CDP-g 97.3 0.00098 2.1E-08 54.2 7.5 77 38-117 3-84 (349)
379 TIGR01809 Shik-DH-AROM shikima 97.3 0.0016 3.4E-08 51.4 8.2 75 38-118 124-200 (282)
380 COG2264 PrmA Ribosomal protein 97.3 0.0033 7.3E-08 49.4 9.8 114 21-141 145-266 (300)
381 TIGR03840 TMPT_Se_Te thiopurin 97.3 0.0049 1.1E-07 46.5 10.5 100 36-140 32-154 (213)
382 PRK01581 speE spermidine synth 97.3 0.0063 1.4E-07 49.3 11.5 97 37-138 149-268 (374)
383 PLN03075 nicotianamine synthas 97.3 0.0047 1E-07 48.7 10.6 98 37-138 122-233 (296)
384 PRK06701 short chain dehydroge 97.3 0.0018 3.9E-08 51.3 8.5 105 37-141 44-184 (290)
385 PRK04457 spermidine synthase; 97.3 0.014 3.1E-07 45.5 13.3 96 37-136 65-175 (262)
386 PRK11036 putative S-adenosyl-L 97.2 0.0061 1.3E-07 47.4 10.9 97 37-138 43-149 (255)
387 PRK06719 precorrin-2 dehydroge 97.2 0.0026 5.5E-08 45.6 8.0 88 38-137 12-99 (157)
388 PRK10258 biotin biosynthesis p 97.2 0.039 8.4E-07 42.7 15.3 97 34-139 38-141 (251)
389 PRK12548 shikimate 5-dehydroge 97.2 0.0039 8.4E-08 49.4 9.8 46 37-83 124-173 (289)
390 PRK14027 quinate/shikimate deh 97.2 0.0059 1.3E-07 48.2 10.7 46 37-83 125-171 (283)
391 PRK08287 cobalt-precorrin-6Y C 97.2 0.016 3.4E-07 42.8 12.4 98 32-137 25-130 (187)
392 PRK08219 short chain dehydroge 97.2 0.0037 7.9E-08 47.3 9.3 77 39-118 3-81 (227)
393 PRK07792 fabG 3-ketoacyl-(acyl 97.2 0.0023 5E-08 51.1 8.4 81 38-118 11-99 (306)
394 PRK14175 bifunctional 5,10-met 97.2 0.0053 1.2E-07 48.2 10.0 96 18-141 137-233 (286)
395 COG1052 LdhA Lactate dehydroge 97.2 0.0055 1.2E-07 49.2 10.3 89 37-140 144-238 (324)
396 PRK12745 3-ketoacyl-(acyl-carr 97.2 0.0024 5.3E-08 49.3 8.2 79 40-118 3-90 (256)
397 PF02719 Polysacc_synt_2: Poly 97.2 0.0041 8.9E-08 48.8 9.3 74 42-119 1-88 (293)
398 TIGR02685 pter_reduc_Leis pter 97.2 0.0037 8.1E-08 48.8 9.3 78 40-117 2-93 (267)
399 PRK12935 acetoacetyl-CoA reduc 97.2 0.0033 7.2E-08 48.3 8.7 81 38-118 5-94 (247)
400 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.0059 1.3E-07 44.2 9.3 97 17-141 22-119 (168)
401 PRK12825 fabG 3-ketoacyl-(acyl 97.2 0.0033 7.1E-08 48.2 8.6 80 38-117 5-93 (249)
402 cd01065 NAD_bind_Shikimate_DH 97.2 0.0056 1.2E-07 43.6 9.2 95 37-140 17-118 (155)
403 TIGR03589 PseB UDP-N-acetylglu 97.2 0.0045 9.8E-08 49.9 9.7 75 38-117 3-83 (324)
404 PRK03369 murD UDP-N-acetylmura 97.2 0.0018 3.8E-08 55.2 7.6 73 35-118 8-80 (488)
405 PRK12744 short chain dehydroge 97.2 0.0029 6.4E-08 49.0 8.3 81 38-118 7-99 (257)
406 PRK08317 hypothetical protein; 97.2 0.0049 1.1E-07 47.0 9.5 101 32-138 13-124 (241)
407 PRK01683 trans-aconitate 2-met 97.1 0.0095 2.1E-07 46.3 11.0 97 32-137 25-129 (258)
408 PRK06123 short chain dehydroge 97.1 0.005 1.1E-07 47.3 9.4 80 39-118 2-90 (248)
409 PRK06718 precorrin-2 dehydroge 97.1 0.0031 6.7E-08 47.2 7.8 92 38-139 9-101 (202)
410 PRK07041 short chain dehydroge 97.1 0.0037 8E-08 47.5 8.5 74 43-118 1-79 (230)
411 PRK06947 glucose-1-dehydrogena 97.1 0.0032 7E-08 48.4 8.2 78 40-117 3-89 (248)
412 PLN02730 enoyl-[acyl-carrier-p 97.1 0.0022 4.8E-08 51.1 7.4 38 38-76 8-47 (303)
413 PLN02233 ubiquinone biosynthes 97.1 0.0079 1.7E-07 46.9 10.3 102 33-140 68-184 (261)
414 PRK07578 short chain dehydroge 97.1 0.0069 1.5E-07 45.0 9.7 87 41-141 2-114 (199)
415 PRK08309 short chain dehydroge 97.1 0.044 9.6E-07 40.1 13.6 89 41-130 2-97 (177)
416 PF13659 Methyltransf_26: Meth 97.1 0.0039 8.4E-08 42.0 7.6 96 39-137 1-114 (117)
417 PLN02657 3,8-divinyl protochlo 97.1 0.0027 5.9E-08 52.5 8.0 106 35-141 56-184 (390)
418 PRK09730 putative NAD(P)-bindi 97.1 0.004 8.7E-08 47.7 8.5 79 40-118 2-89 (247)
419 TIGR01470 cysG_Nterm siroheme 97.1 0.0031 6.7E-08 47.3 7.5 92 38-139 8-101 (205)
420 PRK08618 ornithine cyclodeamin 97.1 0.0056 1.2E-07 49.4 9.5 94 37-141 125-224 (325)
421 PRK13656 trans-2-enoyl-CoA red 97.1 0.004 8.7E-08 50.8 8.5 81 37-119 39-142 (398)
422 TIGR02752 MenG_heptapren 2-hep 97.1 0.0058 1.3E-07 46.6 9.1 102 32-139 39-152 (231)
423 TIGR01500 sepiapter_red sepiap 97.1 0.0055 1.2E-07 47.5 9.0 43 41-83 2-48 (256)
424 PRK07502 cyclohexadienyl dehyd 97.1 0.007 1.5E-07 48.4 9.8 89 40-139 7-101 (307)
425 TIGR00477 tehB tellurite resis 97.1 0.0042 9.1E-08 46.2 8.0 99 32-139 24-134 (195)
426 PRK13255 thiopurine S-methyltr 97.1 0.01 2.3E-07 44.9 10.1 99 35-138 34-155 (218)
427 PF06325 PrmA: Ribosomal prote 97.1 0.0055 1.2E-07 48.5 8.9 96 36-142 159-263 (295)
428 PRK07023 short chain dehydroge 97.0 0.0042 9E-08 47.7 8.1 75 41-117 3-86 (243)
429 PRK00536 speE spermidine synth 97.0 0.0037 8E-08 48.5 7.7 96 37-137 71-170 (262)
430 PRK14103 trans-aconitate 2-met 97.0 0.015 3.3E-07 45.2 11.2 95 32-137 23-125 (255)
431 PLN02989 cinnamyl-alcohol dehy 97.0 0.0034 7.3E-08 50.5 7.8 38 38-75 4-41 (325)
432 PRK05447 1-deoxy-D-xylulose 5- 97.0 0.012 2.6E-07 48.0 10.8 95 40-136 2-120 (385)
433 PRK14967 putative methyltransf 97.0 0.028 6.1E-07 42.7 12.3 97 33-138 31-159 (223)
434 PRK00312 pcm protein-L-isoaspa 97.0 0.0042 9.2E-08 46.8 7.7 100 32-138 72-175 (212)
435 PF02670 DXP_reductoisom: 1-de 97.0 0.019 4.2E-07 39.4 10.1 93 42-134 1-117 (129)
436 PRK12859 3-ketoacyl-(acyl-carr 97.0 0.0051 1.1E-07 47.7 8.3 80 37-117 4-105 (256)
437 PRK12827 short chain dehydroge 97.0 0.0052 1.1E-07 47.1 8.3 81 38-118 5-97 (249)
438 PF03807 F420_oxidored: NADP o 97.0 0.018 4E-07 37.3 9.6 86 41-137 1-93 (96)
439 PLN02896 cinnamyl-alcohol dehy 97.0 0.008 1.7E-07 49.0 9.6 45 35-79 6-50 (353)
440 PF03435 Saccharop_dh: Sacchar 97.0 0.0078 1.7E-07 49.8 9.4 91 42-138 1-98 (386)
441 TIGR03649 ergot_EASG ergot alk 96.9 0.0053 1.1E-07 48.4 8.1 95 41-139 1-105 (285)
442 PLN02653 GDP-mannose 4,6-dehyd 96.9 0.0021 4.6E-08 52.0 5.9 36 38-73 5-40 (340)
443 PRK12748 3-ketoacyl-(acyl-carr 96.9 0.0053 1.2E-07 47.5 7.9 35 38-72 4-40 (256)
444 PRK08655 prephenate dehydrogen 96.9 0.008 1.7E-07 50.5 9.3 44 41-85 2-46 (437)
445 COG1028 FabG Dehydrogenases wi 96.9 0.007 1.5E-07 46.6 8.5 81 38-118 4-96 (251)
446 cd01075 NAD_bind_Leu_Phe_Val_D 96.9 0.016 3.5E-07 43.3 10.0 88 37-138 26-114 (200)
447 PLN02686 cinnamoyl-CoA reducta 96.9 0.0082 1.8E-07 49.3 9.2 45 36-80 50-94 (367)
448 TIGR00138 gidB 16S rRNA methyl 96.9 0.011 2.4E-07 43.4 9.0 93 38-137 42-141 (181)
449 PF08241 Methyltransf_11: Meth 96.9 0.0021 4.6E-08 41.3 4.7 82 49-136 5-95 (95)
450 KOG1207 Diacetyl reductase/L-x 96.9 0.0078 1.7E-07 43.3 7.7 80 38-118 6-87 (245)
451 PRK12824 acetoacetyl-CoA reduc 96.9 0.0091 2E-07 45.7 8.9 78 40-117 3-89 (245)
452 PF05368 NmrA: NmrA-like famil 96.9 0.006 1.3E-07 46.6 7.8 89 42-136 1-100 (233)
453 PRK07340 ornithine cyclodeamin 96.9 0.014 3E-07 46.7 10.0 93 37-141 123-220 (304)
454 PLN00016 RNA-binding protein; 96.9 0.0087 1.9E-07 49.3 9.2 95 39-140 52-166 (378)
455 TIGR00563 rsmB ribosomal RNA s 96.9 0.019 4.2E-07 48.1 11.0 104 32-139 232-369 (426)
456 PF13847 Methyltransf_31: Meth 96.9 0.0085 1.8E-07 42.6 7.8 99 37-140 2-112 (152)
457 cd05311 NAD_bind_2_malic_enz N 96.8 0.021 4.5E-07 43.6 10.3 90 37-138 23-128 (226)
458 PF02737 3HCDH_N: 3-hydroxyacy 96.8 0.017 3.7E-07 42.4 9.5 95 41-136 1-112 (180)
459 TIGR01472 gmd GDP-mannose 4,6- 96.8 0.0046 1E-07 50.2 7.1 34 40-73 1-34 (343)
460 PRK14188 bifunctional 5,10-met 96.8 0.014 3.1E-07 46.1 9.5 95 18-141 137-233 (296)
461 PRK04266 fibrillarin; Provisio 96.8 0.011 2.3E-07 45.1 8.6 100 33-137 67-175 (226)
462 PLN02986 cinnamyl-alcohol dehy 96.8 0.0058 1.3E-07 49.0 7.6 39 38-76 4-42 (322)
463 PRK07574 formate dehydrogenase 96.8 0.0081 1.7E-07 49.4 8.3 89 38-139 191-285 (385)
464 PRK06924 short chain dehydroge 96.8 0.0082 1.8E-07 46.2 8.1 41 40-80 2-43 (251)
465 PRK15469 ghrA bifunctional gly 96.8 0.009 1.9E-07 47.8 8.4 87 38-139 135-227 (312)
466 PRK12749 quinate/shikimate deh 96.8 0.019 4.1E-07 45.5 10.1 78 37-117 122-205 (288)
467 PLN03139 formate dehydrogenase 96.8 0.0084 1.8E-07 49.3 8.4 89 38-139 198-292 (386)
468 PRK14192 bifunctional 5,10-met 96.8 0.02 4.3E-07 45.1 10.1 79 36-141 156-234 (283)
469 PRK13243 glyoxylate reductase; 96.8 0.0094 2E-07 48.2 8.6 88 38-140 149-242 (333)
470 COG3963 Phospholipid N-methylt 96.8 0.067 1.4E-06 38.3 11.5 120 16-139 27-157 (194)
471 PLN02336 phosphoethanolamine N 96.8 0.013 2.7E-07 49.9 9.7 103 32-139 260-370 (475)
472 KOG4169 15-hydroxyprostaglandi 96.8 0.0056 1.2E-07 46.0 6.5 104 39-143 5-141 (261)
473 PLN02823 spermine synthase 96.8 0.029 6.3E-07 45.3 11.0 95 38-136 103-218 (336)
474 PLN02928 oxidoreductase family 96.8 0.0093 2E-07 48.5 8.3 93 38-139 158-263 (347)
475 PRK14982 acyl-ACP reductase; P 96.8 0.018 3.9E-07 46.5 9.7 93 37-140 153-248 (340)
476 PRK07066 3-hydroxybutyryl-CoA 96.8 0.071 1.5E-06 42.9 13.0 85 40-132 8-113 (321)
477 PF01370 Epimerase: NAD depend 96.7 0.0083 1.8E-07 45.6 7.6 74 42-118 1-75 (236)
478 PRK14968 putative methyltransf 96.7 0.01 2.2E-07 43.6 7.8 95 36-137 21-147 (188)
479 KOG1199 Short-chain alcohol de 96.7 0.0098 2.1E-07 42.7 7.1 81 37-118 7-93 (260)
480 TIGR00417 speE spermidine synt 96.7 0.026 5.7E-07 44.3 10.3 98 37-138 71-186 (270)
481 PRK14903 16S rRNA methyltransf 96.7 0.047 1E-06 45.9 12.2 103 32-139 231-367 (431)
482 PF08659 KR: KR domain; Inter 96.7 0.015 3.3E-07 42.6 8.3 76 41-117 2-90 (181)
483 PF03446 NAD_binding_2: NAD bi 96.7 0.017 3.8E-07 41.6 8.5 89 40-141 2-97 (163)
484 PRK14902 16S rRNA methyltransf 96.7 0.023 5.1E-07 47.9 10.4 101 32-137 244-378 (444)
485 TIGR01830 3oxo_ACP_reduc 3-oxo 96.7 0.0096 2.1E-07 45.3 7.5 77 42-118 1-86 (239)
486 PRK00121 trmB tRNA (guanine-N( 96.7 0.057 1.2E-06 40.4 11.4 97 38-138 40-156 (202)
487 KOG1502 Flavonol reductase/cin 96.7 0.011 2.5E-07 47.0 7.8 74 38-117 5-87 (327)
488 PRK15451 tRNA cmo(5)U34 methyl 96.6 0.026 5.5E-07 43.7 9.7 98 36-140 54-166 (247)
489 PRK05579 bifunctional phosphop 96.6 0.01 2.2E-07 49.2 7.7 76 37-118 186-277 (399)
490 PRK14901 16S rRNA methyltransf 96.6 0.037 8.1E-07 46.5 11.2 103 32-138 246-384 (434)
491 PRK14189 bifunctional 5,10-met 96.6 0.024 5.2E-07 44.5 9.3 96 18-141 137-233 (285)
492 TIGR01934 MenG_MenH_UbiE ubiqu 96.6 0.027 5.9E-07 42.5 9.5 102 34-140 35-145 (223)
493 PRK06849 hypothetical protein; 96.6 0.031 6.7E-07 46.3 10.5 95 38-134 3-103 (389)
494 TIGR00715 precor6x_red precorr 96.6 0.0049 1.1E-07 47.8 5.4 73 41-118 2-75 (256)
495 PRK10792 bifunctional 5,10-met 96.6 0.035 7.5E-07 43.6 10.0 96 18-141 138-234 (285)
496 PRK14191 bifunctional 5,10-met 96.6 0.04 8.7E-07 43.3 10.2 96 18-141 136-232 (285)
497 PRK10901 16S rRNA methyltransf 96.6 0.057 1.2E-06 45.3 11.9 101 32-138 238-372 (427)
498 PRK06550 fabG 3-ketoacyl-(acyl 96.6 0.0041 8.9E-08 47.4 4.8 37 38-74 4-40 (235)
499 TIGR01831 fabG_rel 3-oxoacyl-( 96.6 0.014 3.1E-07 44.5 7.8 76 42-117 1-85 (239)
500 PLN02214 cinnamoyl-CoA reducta 96.6 0.014 3.1E-07 47.4 8.0 39 37-75 8-46 (342)
No 1
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4.2e-35 Score=233.23 Aligned_cols=216 Identities=30% Similarity=0.477 Sum_probs=186.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+.++ |+++++. ++|++++.++|||++|....++++|++|||+||+|++|.+++|+||.+|+.+++++.++++.++++
T Consensus 108 ~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~- 184 (326)
T COG0604 108 LVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK- 184 (326)
T ss_pred ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-
Confidence 5678 9999999 999999999999999999899999999999999999999999999999987777777888878888
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|+++++++.+. ++.+++++++++ ++|+|+|+.|++.+..++++|+++|+++.+|..++ ......+...++.+
T Consensus 185 ~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~ 259 (326)
T COG0604 185 ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGK 259 (326)
T ss_pred hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhc
Confidence 9999999999987 899999999998 99999999999999999999999999999998774 11223456777778
Q ss_pred hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHc-CCCcceEEEEe
Q 027106 161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQ-GGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~-~~~~gkvvl~~ 225 (228)
.+...++..... ++...+.++++.+++.+|.+++.+..+||+++...|...... ++..||+||++
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 260 RLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 888888776642 355568899999999999999999999999996555544433 57889999974
No 2
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.5e-35 Score=215.91 Aligned_cols=218 Identities=23% Similarity=0.306 Sum_probs=193.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+.++ |+.+++. ++|++...++|||..+++..++++|++||+|.|+||+|+++.|+++..|+.++++.++.++++.++
T Consensus 112 v~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak- 188 (336)
T KOG1197|consen 112 VFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK- 188 (336)
T ss_pred eccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-
Confidence 4678 9999999 888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
+.|+++.++++.+ |+.+++.+++.+ |+|+++|.+|.+.+..++.+|++.|.+|.+|+.++. ..++++..+-.+
T Consensus 189 enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k 262 (336)
T KOG1197|consen 189 ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPK 262 (336)
T ss_pred hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCC-----CCCeehhhcChh
Confidence 9999999999987 999999999987 999999999999999999999999999999987653 235556666666
Q ss_pred hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106 161 RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228 (228)
Q Consensus 161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~ 228 (228)
++++.-..+..+ ++.......++..++.+|.+++.+.++|||+++.+|+..+++....||+++.+.++
T Consensus 263 ~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 263 ALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred hhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 666654443333 44445577888889999999999999999999999999999999999999998764
No 3
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-34 Score=231.06 Aligned_cols=224 Identities=56% Similarity=0.994 Sum_probs=187.2
Q ss_pred cCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 027106 4 KFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83 (228)
Q Consensus 4 ~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~ 83 (228)
++ |++++++.++|+++++++|||+++...+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++
T Consensus 125 ~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l 203 (348)
T PLN03154 125 QL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 203 (348)
T ss_pred cC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc
Confidence 45 88888764588999999999999988899999999999999999999999999999999999999999999886469
Q ss_pred CCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhce
Q 027106 84 GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIK 163 (228)
Q Consensus 84 g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (228)
|++.++++.+..++.+.+++.+++++|++|||+|+..+..++++++++|+++.+|..++..........+...++.++++
T Consensus 204 Ga~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~ 283 (348)
T PLN03154 204 GFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIR 283 (348)
T ss_pred CCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccce
Confidence 99999988642267777777776689999999999999999999999999999997654321100012245667788999
Q ss_pred eeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106 164 FQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~ 228 (228)
+.|++...+.....+.++++++++++|++++.+..+++|+++++|++.+++++..||+||++.+|
T Consensus 284 i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 284 MQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 99987665433345678999999999999988877899999999999999999999999998764
No 4
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.2e-34 Score=224.73 Aligned_cols=206 Identities=27% Similarity=0.384 Sum_probs=186.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+++| |+++++. ++|.+.|++.|.|++| +..+++||++|+|+|+ ||+|++++|+|+.+|++|+++++++++.+.++
T Consensus 133 ~~~i-P~~~d~~-~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~- 207 (339)
T COG1064 133 VVKI-PEGLDLA-EAAPLLCAGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK- 207 (339)
T ss_pred eEEC-CCCCChh-hhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-
Confidence 5789 9999988 9999999999999999 5599999999999996 89999999999999999999999999999999
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR 161 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (228)
++|++++++.++. +..+.+++. +|+++|+++...+..+++.|+++|+++++|.... ......+...++.++
T Consensus 208 ~lGAd~~i~~~~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~ 278 (339)
T COG1064 208 KLGADHVINSSDS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKE 278 (339)
T ss_pred HhCCcEEEEcCCc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcC
Confidence 9999999997754 776676653 9999999997799999999999999999998741 123356788899999
Q ss_pred ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106 162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226 (228)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~ 226 (228)
+++.|+...+ +..+++++++..+|+++|.+...++++|+++|++.|.+++..|+.||.++
T Consensus 279 ~~i~GS~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 279 ISIVGSLVGT-----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eEEEEEecCC-----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 9999999998 78999999999999999999877899999999999999999999999874
No 5
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.1e-33 Score=211.74 Aligned_cols=225 Identities=46% Similarity=0.788 Sum_probs=202.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+.|++|...++++....|..++.|||.+|.+++++++|++|+|.+|+|++|..+.|+||..|++|+.++.++++..++.+
T Consensus 114 l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~ 193 (340)
T COG2130 114 LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTE 193 (340)
T ss_pred ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHH
Confidence 56787777788877999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC-cCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG-KKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~ 160 (228)
++|.+.++|+..+ ++...+.+..+.|+|+.||++|++.++..+..|+..+|+..+|..+..|-+ .+..+.....++.+
T Consensus 194 ~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~k 272 (340)
T COG2130 194 ELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAK 272 (340)
T ss_pred hcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhh
Confidence 6999999999998 999999999999999999999999999999999999999999998877643 22234445667778
Q ss_pred hceeeceecc-cchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106 161 RIKFQGFLAA-DHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227 (228)
Q Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~ 227 (228)
++++.|+... ++.....+..+++..|+++|+|+...+.+-+|+++++||..+.+++..||.|+++.+
T Consensus 273 r~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 273 RLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 9999999984 445555699999999999999998887766999999999999999999999999864
No 6
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.5e-31 Score=215.71 Aligned_cols=224 Identities=62% Similarity=1.044 Sum_probs=182.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+++++|+++++.+++++++++++|||+++...+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN 194 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 45673456777546899999999999999888999999999999999999999999999999999999999999999993
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR 161 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (228)
++|+++++++.+..++.+.+++.+++++|++||++|+..+..++++++++|+++.+|...+..........+......++
T Consensus 195 ~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~ 274 (338)
T cd08295 195 KLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKR 274 (338)
T ss_pred hcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhcc
Confidence 39999988865422677777777656899999999999999999999999999999865432110000112345666778
Q ss_pred ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+++.++....+.....+.++++++++.+|++++.+...++++++.+|++.+.+++..||+|+++
T Consensus 275 ~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 275 VKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred ceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 8888866655433345678999999999999988777789999999999999998889999874
No 7
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.2e-31 Score=211.96 Aligned_cols=219 Identities=45% Similarity=0.766 Sum_probs=178.0
Q ss_pred ccCCCCCCCcchhh-hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 3 RKFDPMGFPLSYQV-GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 3 ~~v~P~~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
.++ |+++++. ++ ++++++++|||+++...+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++
T Consensus 104 ~~~-p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~- 180 (325)
T TIGR02825 104 TEW-PDTLPLS-LALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK- 180 (325)
T ss_pred ccc-cCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 455 8888887 55 6799999999999988899999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC-cCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG-KKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~ 160 (228)
++|++.++++.+..++.+.++..+++++|++||++|++.+..++++++++|+++.+|...+.... .............+
T Consensus 181 ~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~ 260 (325)
T TIGR02825 181 KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQ 260 (325)
T ss_pred HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhh
Confidence 89999988887532556666666555899999999998889999999999999999865421100 00111224456667
Q ss_pred hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
++++.++....+ .....+.++++++++.+|++++.+..+++++++++|++.+.+++..||+|++
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 261 ELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred cceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 888888765433 2233567899999999999998877788999999999999999988999873
No 8
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-30 Score=209.80 Aligned_cols=221 Identities=45% Similarity=0.814 Sum_probs=181.5
Q ss_pred cccCCCCCCCc--c--hhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 027106 2 LRKFDPMGFPL--S--YQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT 77 (228)
Q Consensus 2 ~~~v~P~~~~~--~--~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~ 77 (228)
++++ |++++. . ..+++++++++|||+++....++++|++|||+|++|++|.+++|+|+.+|++|+++++++++.+
T Consensus 104 ~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA 182 (329)
T ss_pred eEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4677 888872 1 1245788999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCC-CccchHH
Q 027106 78 LLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKR-AAPEMLD 156 (228)
Q Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~ 156 (228)
.++ ++|+++++++.+. ++.+.+++.+++++|++||++|++.+..++++++++|+++.+|........... .......
T Consensus 183 ~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 260 (329)
T cd08294 183 WLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQET 260 (329)
T ss_pred HHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHH
Confidence 999 8999999998876 888888877766899999999999999999999999999999864321110000 1223445
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
...+++++.++....+.....+.++++++++++|++++.+..+++++++++|++.+.+++..||+++++
T Consensus 261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 261 IIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 677888888876544323345678899999999999987777789999999999999999889999864
No 9
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=211.92 Aligned_cols=220 Identities=27% Similarity=0.367 Sum_probs=173.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhc------CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIG------KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK 75 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~ 75 (228)
++++ |+++++. ++|+++++++|||.++.... +.++|++|||+||+|++|++++|+|++.++..++++.++++
T Consensus 117 ~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~ 194 (347)
T KOG1198|consen 117 LVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK 194 (347)
T ss_pred ccCC-CCccChh-hhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch
Confidence 5678 9999999 99999999999999999989 89999999999999999999999999999655555558899
Q ss_pred HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106 76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML 155 (228)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 155 (228)
.++++ ++|+++++|+++. ++.+.+.+.++++||+||||.|+........++..+|+...++...+.....+. ...+.
T Consensus 195 ~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~-~~~~~ 271 (347)
T KOG1198|consen 195 LELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKL-DDLWQ 271 (347)
T ss_pred HHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEecccccccccc-ccchh
Confidence 99999 9999999999997 999999998844999999999998888888999888765444433321110100 10011
Q ss_pred HHHhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106 156 DVIYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226 (228)
Q Consensus 156 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~ 226 (228)
..........+....++ .....+.++.+.++++.|+++|.+.+.||++++.+||+.+.++...||++++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 272 SANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred hhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 11111111111111111 333468999999999999999999999999999999999999999999999875
No 10
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=2e-30 Score=197.48 Aligned_cols=209 Identities=24% Similarity=0.249 Sum_probs=180.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
.+|+ |+++|++ .++|..++.+++++. .++++++|++|||+|| |++|+.+...|+.+|+ +|++++-.+.|++.++
T Consensus 137 c~KL-Pd~vs~e--eGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak 211 (354)
T KOG0024|consen 137 CYKL-PDNVSFE--EGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK 211 (354)
T ss_pred eeeC-CCCCchh--hcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH
Confidence 6899 9999999 889999999999999 7899999999999996 9999999999999999 9999999999999999
Q ss_pred HHhCCCceeeccCh---hhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106 81 DKLGFDDAFNYKEE---TDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML 155 (228)
Q Consensus 81 ~~~g~~~~~~~~~~---~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 155 (228)
++|++.+.+.... +++.+.+.+..+. .+|+.|||+|. ..++.++.+++.+|.++++|..+. ..+++..
T Consensus 212 -~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~ 284 (354)
T KOG0024|consen 212 -KFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPII 284 (354)
T ss_pred -HhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChh
Confidence 8999887665542 2455566655554 69999999997 599999999999999999987543 3478889
Q ss_pred HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC-cceEEEEecC
Q 027106 156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN-IGKKVVRITE 227 (228)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~~~ 227 (228)
....+++++.|+..+. +..+..+++++.+|++... ++..|+++++.+||+.+.+++. .-|++|..++
T Consensus 285 ~v~~kE~~~~g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 285 DVALKEVDLRGSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred hhhhheeeeeeeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 9999999999998876 4689999999999998765 5556699999999999998884 4499998754
No 11
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.97 E-value=1.6e-30 Score=195.58 Aligned_cols=222 Identities=60% Similarity=1.017 Sum_probs=203.7
Q ss_pred CCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 027106 7 PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD 86 (228)
Q Consensus 7 P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~ 86 (228)
|.++|+++....+..+++|||..+.+++.+++|++|+|-||+|++|..+.|+|+.+||+|+..+.++++...++.++|.+
T Consensus 122 ~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d 201 (343)
T KOG1196|consen 122 PTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFD 201 (343)
T ss_pred CCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCc
Confidence 57889998889999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred ceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeec
Q 027106 87 DAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG 166 (228)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (228)
..+|+.++.+..+.+++..+.|+|+.||++|+...+..+..|+..||++.+|..+..|++.+..-.+....+.+++++.|
T Consensus 202 ~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqg 281 (343)
T KOG1196|consen 202 DAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQG 281 (343)
T ss_pred cceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeee
Confidence 99999986688888998888899999999999999999999999999999999998887665555667888899999999
Q ss_pred eecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106 167 FLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228 (228)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~ 228 (228)
+...++.+...+.+..+..++++|+|+-.-+..-.|+..++||.-+.+++..||.++.+..|
T Consensus 282 flv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 282 FLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred EEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence 98888877778999999999999999877666669999999999999999999999998654
No 12
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.97 E-value=5.7e-30 Score=208.81 Aligned_cols=211 Identities=19% Similarity=0.228 Sum_probs=179.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+.++++|||+++....++++|++|||+|+ |++|++++|+|+..|+ +|++++.+++++++++
T Consensus 157 ~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~ 233 (371)
T cd08281 157 VVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR 233 (371)
T ss_pred eEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence 5788 9999998 788888999999999878889999999999985 9999999999999999 6999999999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|...+. .....+...++.
T Consensus 234 -~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~ 307 (371)
T cd08281 234 -ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVA 307 (371)
T ss_pred -HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhh
Confidence 9999998888775 78888888776689999999986 6889999999999999999975421 122455667888
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+++++.|++...+. .++.+..+++++.+|++++ .++.+|+++|+++||+.+.+++..+|+|+
T Consensus 308 ~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 308 EERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred cCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 99999998765431 1356788999999999976 35677899999999999999988878764
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.97 E-value=3.5e-29 Score=201.95 Aligned_cols=205 Identities=24% Similarity=0.280 Sum_probs=173.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+++++.|||+++ ...++++|++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++
T Consensus 130 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~ 205 (339)
T cd08239 130 LIPL-PDDLSFA-DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK 205 (339)
T ss_pred eEEC-CCCCCHH-HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5788 9999998 7888999999999999 5678999999999985 99999999999999997 999999999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.++++++. + .+.+.+.+++ ++|++|||+|+. .+..++++++++|+++.+|...... ......++
T Consensus 206 -~~ga~~~i~~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~ 276 (339)
T cd08239 206 -ALGADFVINSGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT------IEVSNDLI 276 (339)
T ss_pred -HhCCCEEEcCCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc------cCcHHHHH
Confidence 9999988888765 5 6677777766 899999999985 5688999999999999999754211 11234567
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++++.+++... .+.++++++++.+|++.+ .++.+++++++++||+.+.++. .||+||+|
T Consensus 277 ~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 277 RKQRTLIGSWYFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred hCCCEEEEEecCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 7899999987765 467889999999999875 4667789999999999998875 68999975
No 14
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.97 E-value=9.1e-29 Score=199.99 Aligned_cols=221 Identities=35% Similarity=0.650 Sum_probs=171.4
Q ss_pred cccCCCCCCCcc---hhhhccchhHHHHHHHHHHhcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 027106 2 LRKFDPMGFPLS---YQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK 75 (228)
Q Consensus 2 ~~~v~P~~~~~~---~~aa~l~~~~~ta~~~l~~~~~~~~g--~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~ 75 (228)
++++ |++++.. +.+++++.+++|||+++.+.+++++| ++|||+|++|++|++++|+|+.+|+ +|+++++++++
T Consensus 114 ~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~ 192 (345)
T cd08293 114 LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEK 192 (345)
T ss_pred eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 4678 8775432 12567788999999999888889877 9999999999999999999999999 89999999999
Q ss_pred HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccC--CCcCCCccc
Q 027106 76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYT--DGKKRAAPE 153 (228)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~ 153 (228)
.+.+++++|+++++++.+. ++.+.+++.+++++|++||++|+..+..++++++++|+++.+|...... .... ....
T Consensus 193 ~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~ 270 (345)
T cd08293 193 CQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYP-PPLP 270 (345)
T ss_pred HHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCcc-cccc
Confidence 9998845999999988876 8888888877668999999999988899999999999999998643211 0000 0111
Q ss_pred --hHH-HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 154 --MLD-VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 154 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
... ...+++++.++....+....++.++++++++.+|++++....+++++++.+|++.+.+++..||+|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 271 EATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred chhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 111 123444444443323233345678889999999999987666679999999999999998889999875
No 15
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.97 E-value=1.4e-29 Score=194.50 Aligned_cols=211 Identities=24% Similarity=0.267 Sum_probs=183.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
+.|| +++.|+. .++.+.|..+|.+-+..+.+++++|++|.|+| .|++|++++|-|+..|+ +|++++.+++++++++
T Consensus 151 ~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~ 227 (366)
T COG1062 151 LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK 227 (366)
T ss_pred eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence 5789 8888998 88899999999999999999999999999999 69999999999999999 9999999999999999
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
+||+++++|.++..++.+.+.++|++|+|++|||+|. ..++.++.+..++|+.+.+|..... ...+.++..+..
T Consensus 228 -~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~lv~ 302 (366)
T COG1062 228 -KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRPFQLVT 302 (366)
T ss_pred -hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecChHHeec
Confidence 9999999999875358999999999899999999998 6999999999999999999986642 233455666665
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
. .+++|+++... ..+..+..++++..+|++... ++..++|+|++|||+.+.+++.. |-||+
T Consensus 303 g-r~~~Gs~~G~~--~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 303 G-RVWKGSAFGGA--RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred c-ceEEEEeecCC--ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 5 88999988754 115779999999999999875 55567999999999999999976 55554
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.97 E-value=4.9e-29 Score=201.38 Aligned_cols=203 Identities=19% Similarity=0.224 Sum_probs=167.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. ++++..++++||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 137 ~~~~-P~~l~~~--~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~ 211 (343)
T PRK09880 137 CIPY-PEKADEK--VMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR 211 (343)
T ss_pred eEEC-CCCCCHH--HHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH
Confidence 5788 9998877 56677888999999944 56678999999995 9999999999999999 7999999999999999
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|+++++++++. ++.+.. +. .+++|++|||+|+ ..+..++++++++|+++.+|.... ...+++..++.
T Consensus 212 -~lGa~~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~ 281 (343)
T PRK09880 212 -EMGADKLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIV 281 (343)
T ss_pred -HcCCcEEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHh
Confidence 8999999888765 544322 21 2369999999997 588999999999999999996432 22456677788
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+++++.++.... +.++++++++++|++++ .++.+++++|+++||+.+.++...||++|.+
T Consensus 282 k~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 282 KEISLKGSFRFT------EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred CCcEEEEEeecc------ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 999998876532 56889999999999986 4567789999999999999888789999874
No 17
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=3.3e-29 Score=190.47 Aligned_cols=209 Identities=21% Similarity=0.283 Sum_probs=183.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+++| |+++++. .||++.|++.|.|..| ...++.||++|-|.|+ ||+|.+++|+|+++|.+|++++++..+.+.+.+
T Consensus 148 a~kI-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 148 AIKI-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIK 223 (360)
T ss_pred EEEC-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHH
Confidence 5789 9999999 9999999999999999 6789999999999996 779999999999999999999988755555554
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR 161 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (228)
.+|++.+++..+..+..+.+...+++++|-+.+. ....+..++.+++++|++|++|.+.. ....+...+..+.
T Consensus 224 ~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~ 296 (360)
T KOG0023|consen 224 SLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGR 296 (360)
T ss_pred hcCcceeEEecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhccc
Confidence 8999998888744499999998888788888776 44588889999999999999998763 3467778888999
Q ss_pred ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106 162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227 (228)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~ 227 (228)
+.+.|+..++ +...++++++..++.+++.+... +++++++||++++++...+|.|+++..
T Consensus 297 ~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE~v-~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 297 KSIKGSIVGS-----RKETQEALDFVARGLIKSPIELV-KLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred EEEEeecccc-----HHHHHHHHHHHHcCCCcCceEEE-ehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 9999999998 78899999999999999887764 999999999999999999999998764
No 18
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=1.4e-29 Score=217.48 Aligned_cols=218 Identities=24% Similarity=0.381 Sum_probs=188.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+-.| |.+..++ +|++.|+.|.|+||+|..++..++|++||||+|+||+|++||.+|.+.|++|+.++.+.++.+++.+
T Consensus 1518 lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~ 1595 (2376)
T KOG1202|consen 1518 LWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLK 1595 (2376)
T ss_pred hhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHH
Confidence 3457 9999999 9999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred HhCC---CceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 82 KLGF---DDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 82 ~~g~---~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
.|.. .++-|.++. +|..-+.+.|.| |+|+|+|....+.++.+++||+.+|||..+|--.-. .........
T Consensus 1596 rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLS-----qNspLGMav 1669 (2376)
T KOG1202|consen 1596 RFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLS-----QNSPLGMAV 1669 (2376)
T ss_pred hchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecc-----cCCcchhhh
Confidence 5553 566777776 999999999988 999999999999999999999999999999854311 123445677
Q ss_pred Hhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106 158 IYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~ 227 (228)
+.+|.+|+|..+..+ .++.++.+.-+.+-+++|.++|.+..+|+-.++++||+.|.+++..||+|+++..
T Consensus 1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcc
Confidence 889999999988766 3344455555555666788999999999999999999999999999999999854
No 19
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.97 E-value=1.3e-28 Score=197.53 Aligned_cols=212 Identities=23% Similarity=0.280 Sum_probs=175.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVS-AASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++++++.++|||.++ ...+. ++++++|+ +++|++|++++|+|+.+|++|+++++++++.+.++
T Consensus 110 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~ 185 (324)
T cd08291 110 CLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK 185 (324)
T ss_pred eEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 5688 9999988 7888888899998655 55555 56666666 78899999999999999999999999999999999
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|+++++++... ++.+.+++.+++ ++|++||++|+......+++++++|+++.+|...+.+ ....+....+.
T Consensus 186 -~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~ 259 (324)
T cd08291 186 -KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIF 259 (324)
T ss_pred -HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhh
Confidence 8999999988776 888888888876 8999999999988888999999999999999754321 11244556778
Q ss_pred hhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 160 KRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+++++.++....+ .....+.++.++++++ +.+++.+..+|+++|+.+||+.+.++...||++|.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 260 KNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred cCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 8999998887654 2223567888899988 99999888999999999999999999888999874
No 20
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.96 E-value=1.7e-28 Score=199.25 Aligned_cols=211 Identities=20% Similarity=0.256 Sum_probs=176.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+++.++++|+++...+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++
T Consensus 142 ~~~i-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~ 218 (358)
T TIGR03451 142 CTKV-DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR 218 (358)
T ss_pred eEEC-CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5678 8898887 788888999999999878889999999999985 9999999999999999 5999999999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|...+. .....+...++
T Consensus 219 -~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~ 292 (358)
T TIGR03451 219 -EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVF 292 (358)
T ss_pred -HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHh
Confidence 9999988888765 778888888876 89999999997 5889999999999999999975421 11234556777
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.+++++.+++..... .++.++++++++.+|++++ .++.+||++|+.+||+.+.+++.. |+++.
T Consensus 293 ~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 293 GRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred hcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 889998887643211 1466888999999999976 367788999999999999888765 77764
No 21
>PLN02827 Alcohol dehydrogenase-like
Probab=99.96 E-value=5e-28 Score=197.62 Aligned_cols=212 Identities=20% Similarity=0.241 Sum_probs=175.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+.+.++++|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++++.+.++
T Consensus 159 ~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~ 235 (378)
T PLN02827 159 AVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235 (378)
T ss_pred eEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 5788 9999988 788888899999998877789999999999985 9999999999999999 5788888999999998
Q ss_pred HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccC-cEEEEEeeecccCCCcCCCccch-HH
Q 027106 81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEM-LD 156 (228)
Q Consensus 81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~ 156 (228)
++|++.++++.+. +++.+.+++.+++++|++||++|.. .+..+++.++++ |+++.+|..... ..... ..
T Consensus 236 -~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~~~~~~~~ 308 (378)
T PLN02827 236 -TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------PEVSAHYG 308 (378)
T ss_pred -HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------ccccccHH
Confidence 9999888887642 2667777777766899999999974 789999999998 999999975421 12222 35
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~ 226 (228)
++.+++++.|+....+. ....++.+++++.+|++++ .++.+|+|+++.+|++.+.+++. .|+||.+.
T Consensus 309 ~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 309 LFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred HHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 67789999998765431 1346788999999999998 57778899999999999998876 59999874
No 22
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.96 E-value=4.7e-28 Score=196.60 Aligned_cols=204 Identities=18% Similarity=0.224 Sum_probs=167.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT-LLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~-~~~ 80 (228)
++++ |+++++. +++++.+.+.|+|+++.....+++|++|||.|+ |++|++++|+|+.+|++|++++.++++.. .++
T Consensus 149 ~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~ 225 (360)
T PLN02586 149 VLRF-PDNLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN 225 (360)
T ss_pred eeeC-CCCCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH
Confidence 5788 9999998 888999999999999976677889999999885 99999999999999999988877666544 445
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|++++++..+. +.+++.++ ++|++||++|. ..++.++++++++|+++.+|...+ ....+...++.
T Consensus 226 -~~Ga~~vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~ 293 (360)
T PLN02586 226 -RLGADSFLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVL 293 (360)
T ss_pred -hCCCcEEEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHh
Confidence 8999888876543 23444443 69999999997 478999999999999999986432 12445566677
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~ 226 (228)
++..+.++.... ...++++++++.+|++++.+ .+|+|+|+++||+.+.+++..||+|+++.
T Consensus 294 ~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 294 GRKLVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred CCeEEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 788887777655 35688999999999999766 46899999999999999988899999873
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.96 E-value=1.3e-27 Score=193.44 Aligned_cols=208 Identities=22% Similarity=0.267 Sum_probs=171.6
Q ss_pred cccCCCC------CCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106 2 LRKFDPM------GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK 75 (228)
Q Consensus 2 ~~~v~P~------~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~ 75 (228)
++++ |+ ++++. +++++++++.|+|+++. ..++++|++|+|+|+ |++|++++|+|+.+|++|+++++++++
T Consensus 127 ~~~i-p~~~~~~~~~~~~-~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~ 202 (349)
T TIGR03201 127 LCVV-DEARLAAAGLPLE-HVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEK 202 (349)
T ss_pred eEEC-CcccccccCCCHH-HhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 3567 76 77777 78888899999999995 588999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhCCCceeeccCh--hhHHHHHHHHCCC-Ccc----EEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCc
Q 027106 76 VTLLKDKLGFDDAFNYKEE--TDLKAALKRYFPD-GID----IYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGK 147 (228)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~-~~d----~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 147 (228)
++.++ ++|+++++++.+. +++.+.+++.+++ |+| ++|||+|+ ..++.++++++++|+++.+|...+.
T Consensus 203 ~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~---- 277 (349)
T TIGR03201 203 LEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK---- 277 (349)
T ss_pred HHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC----
Confidence 99998 8999888876543 2566777778776 786 89999997 4778889999999999999976421
Q ss_pred CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc-cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 148 KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL-EDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
..++...++.++.++.+.+... .+.++.+++++++|++++. ....++|+++++||+.+.++...+|+++++
T Consensus 278 --~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 278 --TEYRLSNLMAFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred --cccCHHHHhhcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 2344556667778888876544 4678899999999999763 234679999999999999998889999863
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.96 E-value=8.8e-28 Score=192.82 Aligned_cols=196 Identities=16% Similarity=0.138 Sum_probs=164.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++++++.+.|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++
T Consensus 132 ~~~l-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~- 206 (329)
T TIGR02822 132 AYRL-PTGYDDV-ELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL- 206 (329)
T ss_pred EEEC-CCCCCHH-HhHHHhccchHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-
Confidence 5788 9999988 7888999999999999 4689999999999996 99999999999999999999999999999999
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++++++..+. . .+++|+++++.+. ..+..++++++++|+++.+|...+. ...++...++.+
T Consensus 207 ~~Ga~~vi~~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~ 271 (329)
T TIGR02822 207 ALGAASAGGAYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFY 271 (329)
T ss_pred HhCCceecccccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhC
Confidence 9999988875421 1 1368988887764 6899999999999999999974321 123455666778
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
++++.++.... ++.+.++++++++|++++ ++.+|+|+|+++||+.+.+++..||+||
T Consensus 272 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 272 ERQIRSVTSNT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CcEEEEeecCC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 88888876554 456788899999999975 4577899999999999999999999987
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.96 E-value=1.2e-27 Score=194.96 Aligned_cols=203 Identities=19% Similarity=0.225 Sum_probs=168.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-VTLL 79 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~ 79 (228)
++++ |+++++. +++++++.+.|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.+
T Consensus 143 ~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a 219 (375)
T PLN02178 143 VLSI-PDGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI 219 (375)
T ss_pred eEEC-CCCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH
Confidence 5788 9999998 888999999999999855433 368999999985 999999999999999999998876554 6777
Q ss_pred HHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 80 KDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
+ ++|+++++++.+. +.+.+.++ ++|++|||+|.+ .+..++++++++|+++.+|...+ ...++...++
T Consensus 220 ~-~lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~ 287 (375)
T PLN02178 220 D-RLGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLV 287 (375)
T ss_pred H-hCCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHH
Confidence 7 8999888876542 23444443 699999999985 78999999999999999986532 1245567777
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++++.|+.... .+.+.++++++.+|++++.+ .+|||+|+++||+.+.+++..||+|+++
T Consensus 288 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 288 LGRKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred hCCeEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 8999999887765 46788999999999999876 4689999999999999998889999987
No 26
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.96 E-value=1.2e-27 Score=193.68 Aligned_cols=213 Identities=19% Similarity=0.251 Sum_probs=168.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+ .+++++++++ ...++++|++|||+| +|++|++++|+|+.+|++ |+++++++++.+.++
T Consensus 128 ~~~l-P~~~s~~-~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~ 202 (347)
T PRK10309 128 LFAL-PTDMPIE-DGAFI-EPITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK 202 (347)
T ss_pred eEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 5678 9999887 55544 3566788886 668899999999998 599999999999999996 788988999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-Ccc-EEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GID-IYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d-~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|+++++++++. + ...+.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|...+. . .........+
T Consensus 203 -~~Ga~~~i~~~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~ 276 (347)
T PRK10309 203 -SLGAMQTFNSREM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKI 276 (347)
T ss_pred -HcCCceEecCccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHH
Confidence 9999888887764 4 4556666665 898 99999997 5889999999999999999975431 1 0111123356
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+.+++++.|++........++.++++++++++|++. +.++.+++|+|+++|++.+.++...||+|+++
T Consensus 277 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 277 LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred hhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 778999999776422111246688899999999985 55777889999999999999988889999976
No 27
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.96 E-value=2.8e-27 Score=192.02 Aligned_cols=206 Identities=20% Similarity=0.214 Sum_probs=171.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++++++.+.|||+++......++|++|+|+| +|++|++++|+|+.+|++|+++++++++.+.+.+
T Consensus 146 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~ 222 (357)
T PLN02514 146 VVKI-PEGMAPE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALE 222 (357)
T ss_pred eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 5788 9999998 88899999999999997767778999999997 5999999999999999999988888877766654
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++..+. ..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|...+ ...++...++.+
T Consensus 223 ~~Ga~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~ 291 (357)
T PLN02514 223 HLGADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLG 291 (357)
T ss_pred hcCCcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhC
Confidence 7999877665432 23444333 69999999996 588899999999999999997642 124556667788
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~ 227 (228)
++++.|++... ...++++++++.+|++++.+ .+|+++|+.+||+.+.+++..||+++.++.
T Consensus 292 ~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 292 RKVITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred CcEEEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 99999988766 45788999999999998766 468999999999999999988999999864
No 28
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.96 E-value=2.9e-27 Score=189.53 Aligned_cols=213 Identities=20% Similarity=0.246 Sum_probs=180.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++.+.+||+++ ...++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.++
T Consensus 106 ~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~- 181 (324)
T cd08292 106 LVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR- 181 (324)
T ss_pred eEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-
Confidence 5688 9999988 7888888899999998 5589999999999999999999999999999999999998999889998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++++++..+. ++.+.+.+.+++ ++|++||++|+.....++++++++|+++.+|...+. .........+.+
T Consensus 182 ~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~ 255 (324)
T cd08292 182 ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGE-----PMQISSGDLIFK 255 (324)
T ss_pred hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCC-----CCcCCHHHHhhC
Confidence 7899888888765 788888888887 999999999998889999999999999999865321 123344556678
Q ss_pred hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
++++.++....+ +....+.++.+++++.+|.+.+.+...++++++.+|++.+.++...+|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 256 QATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred CCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 999998876543 2334568899999999999987667778999999999999888778899874
No 29
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.96 E-value=3.7e-27 Score=192.02 Aligned_cols=212 Identities=20% Similarity=0.266 Sum_probs=168.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.++++++.++
T Consensus 151 ~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~ 227 (368)
T TIGR02818 151 LAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK 227 (368)
T ss_pred eEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5788 9999998 888899999999999978889999999999985 9999999999999999 8999999999999998
Q ss_pred HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|++++++..+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... .........+
T Consensus 228 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~ 302 (368)
T TIGR02818 228 -KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQL 302 (368)
T ss_pred -HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHH
Confidence 9999888887641 256677777776689999999996 5888999999886 999999975421 0112223333
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
. ++..+.++..... ..+..+.++++++.+|++++ .++.+|+|+|+++||+.+.+++. .|++|++
T Consensus 303 ~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 303 V-TGRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred h-ccceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 3 2344566544321 11356888999999999864 46778899999999999988765 5999874
No 30
>PLN02740 Alcohol dehydrogenase-like
Probab=99.96 E-value=2.5e-27 Score=193.88 Aligned_cols=211 Identities=18% Similarity=0.250 Sum_probs=171.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.+.+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 164 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~ 240 (381)
T PLN02740 164 VVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK 240 (381)
T ss_pred eEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH
Confidence 5688 9999988 788889999999999878899999999999995 9999999999999999 6999999999999998
Q ss_pred HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|++.+++..+. +++.+.+++.+++++|++||++|. ..+..++++++++ |+++.+|..... ....+....+
T Consensus 241 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~~ 315 (381)
T PLN02740 241 -EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPMEL 315 (381)
T ss_pred -HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHHH
Confidence 9999888887653 147777877776689999999997 6889999999996 999999975421 0112222223
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.+++++.|+....+.. ...++.+++++.+|++++ .++.+|+|+|+++|++.+.+++. .|++|+
T Consensus 316 -~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 316 -FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred -hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 3678888877654321 246788999999999865 46678899999999999988875 499886
No 31
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.96 E-value=5.8e-27 Score=190.95 Aligned_cols=211 Identities=23% Similarity=0.303 Sum_probs=168.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+++++.|||+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 152 ~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~ 228 (368)
T cd08300 152 VAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK 228 (368)
T ss_pred eEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 5788 9999998 788889999999999877889999999999985 9999999999999999 7999999999999998
Q ss_pred HHhCCCceeeccChh-hHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|+++++++.+.+ ++.+.+.+.+++++|+|||++|+ ..+..++++++++ |+++.+|...+. .........+
T Consensus 229 -~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~ 303 (368)
T cd08300 229 -KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQL 303 (368)
T ss_pred -HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHH
Confidence 99999888876531 47777887776689999999997 5889999999986 999999975321 0112222222
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
. ++..+.++....+. .++.+.++++++.+|++++. ++.+++|+|+++||+.+.+++. .|++|+
T Consensus 304 ~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 304 V-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred h-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 2 33455555543321 14667889999999999864 6678899999999999987765 588874
No 32
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=2.4e-27 Score=179.70 Aligned_cols=211 Identities=21% Similarity=0.269 Sum_probs=181.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
+.|| ++..|++ .++.|.|...|+|.+..+.+++++|+++.|+| .|++|+++++-||..|+ +||.++-++++++.++
T Consensus 158 v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak 234 (375)
T KOG0022|consen 158 VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK 234 (375)
T ss_pred eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH
Confidence 5688 7788999 89999999999999999999999999999999 69999999999999999 9999999999999999
Q ss_pred HHhCCCceeeccChh-hHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|+++++|+.+.. .+.+.+++.|++|+|+-|||+|. +.+.+++.+...| |+-+.+|..... ...+..+..+
T Consensus 235 -~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~----~~i~~~p~~l 309 (375)
T KOG0022|consen 235 -EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG----QEISTRPFQL 309 (375)
T ss_pred -hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----cccccchhhh
Confidence 99999999987533 37888999999999999999998 6888999999887 999999987642 2334555555
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+ ++.++.|+..+.+.. ++.+..+++...++++... ++.++||+++.+||+.|.+++.. |.||.
T Consensus 310 ~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 310 V-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred c-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 5 477888888777632 6788999999999987765 56666999999999999999976 77765
No 33
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.95 E-value=1.1e-26 Score=189.42 Aligned_cols=210 Identities=19% Similarity=0.242 Sum_probs=170.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+++.++|||+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 153 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~ 229 (369)
T cd08301 153 VAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK 229 (369)
T ss_pred EEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5678 9999988 788888999999999878899999999999985 9999999999999999 8999999999999998
Q ss_pred HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|++.++++.+. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|..... .....+...+
T Consensus 230 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~ 304 (369)
T cd08301 230 -KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNL 304 (369)
T ss_pred -HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHH
Confidence 9999888877642 156677777776689999999987 4788899999996 999999976531 1122333334
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+ +++++.|+....+. .+..++.+++++.+|+++.. +..++||+|+++||+.+.+++.. |++|
T Consensus 305 ~-~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 305 L-NGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred h-cCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 4 68899888765431 13568889999999988653 56778999999999999998864 8876
No 34
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.95 E-value=1.6e-26 Score=187.29 Aligned_cols=204 Identities=22% Similarity=0.278 Sum_probs=173.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++. ..++.|||+++ ...++++|++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.++++
T Consensus 140 ~~~l-P~~~~~~-~aa~-~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~ 214 (351)
T cd08233 140 VHKL-PDNVPLE-EAAL-VEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE 214 (351)
T ss_pred eEEC-cCCCCHH-Hhhh-ccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5678 9998887 5544 47888999999 7789999999999985 9999999999999999 8999999999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.++++.+. ++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.+|.... ...++...++
T Consensus 215 -~~ga~~~i~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~ 286 (351)
T cd08233 215 -ELGATIVLDPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLV 286 (351)
T ss_pred -HhCCCEEECCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHH
Confidence 8999998888876 788888888776 79999999985 688999999999999999997542 2245667778
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcH-HHHHHHhHcCCC-cceEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESI-PSAFTGLFQGGN-IGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~-~~A~~~~~~~~~-~gkvvl 223 (228)
.+++++.++.... ++.++++++++++|++++ .+..+++++|+ ++|++.+.+++. .+|+||
T Consensus 287 ~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 287 LKEKTLTGSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred hhCcEEEEEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 8999999887654 467899999999999964 45677899996 799999999886 489987
No 35
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.95 E-value=2.1e-26 Score=187.53 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=169.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.++++++|||+++...+++++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 150 ~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~ 226 (365)
T cd08277 150 VAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK 226 (365)
T ss_pred eEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 5788 9999988 88888999999999987888999999999998 59999999999999999 7999999999999998
Q ss_pred HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|++++++..+. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...+. ....+...+
T Consensus 227 -~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~ 300 (365)
T cd08277 227 -EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQL 300 (365)
T ss_pred -HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHH
Confidence 9999888877642 145667777766689999999996 6888999999885 999999975421 112334444
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+. ++++.+++...+. .+..+.++++++.++.++ +.++.+|+|+|+++||+.+.+++ ..|+++.
T Consensus 301 ~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 301 IL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred hh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 43 7888887765431 134678899999998765 45677889999999999998887 4588863
No 36
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.95 E-value=4.3e-26 Score=182.72 Aligned_cols=214 Identities=26% Similarity=0.372 Sum_probs=179.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++++++.++||| ++....+++++++|+|+|++|++|.+++++|+.+|++|+++++++++.+.++
T Consensus 109 ~~~l-p~~~~~~-~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~- 184 (324)
T cd08244 109 LHPV-PDGLDLE-AAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR- 184 (324)
T ss_pred eEeC-CCCCCHH-HHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence 5678 9999888 7888999999995 4557789999999999999999999999999999999999999999999997
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++..+. ++...+.+.+++ ++|+++|++|+.....++++++++|+++.+|..... ....+....+.+
T Consensus 185 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~ 258 (324)
T cd08244 185 ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRR 258 (324)
T ss_pred HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhC
Confidence 8999888887765 777777777776 899999999998789999999999999999875432 113344555788
Q ss_pred hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++++.++..... +....+.+.++++++.++.+.+.+...++++++.+|++.+.++...||+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 259 GVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred CcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 888888776543 33445788889999999999877777889999999999999988889999864
No 37
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.95 E-value=2.6e-26 Score=188.71 Aligned_cols=210 Identities=21% Similarity=0.273 Sum_probs=174.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL 79 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~ 79 (228)
++++ |+++++. +++.+++++.|||+++... +++++|++|+|+|++|++|++++++|+.+|++++++++++++.+.+
T Consensus 157 l~~i-P~~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~ 234 (393)
T cd08246 157 LMPK-PKHLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC 234 (393)
T ss_pred eEEC-CCCCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 5788 9999988 7888999999999998655 7899999999999889999999999999999999999999999999
Q ss_pred HHHhCCCceeeccCh---------------------hhHHHHHHHHCCC--CccEEEcCcchhHHHHHHHccccCcEEEE
Q 027106 80 KDKLGFDDAFNYKEE---------------------TDLKAALKRYFPD--GIDIYFDNVGAEMQEAAIANMNTYGRVAV 136 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~---------------------~~~~~~~~~~~~~--~~d~vld~~g~~~~~~~~~~l~~~G~~v~ 136 (228)
+ ++|++.+++.++. ..+.+.+.+++++ ++|++||++|+..+..++++++++|+++.
T Consensus 235 ~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~ 313 (393)
T cd08246 235 R-ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVI 313 (393)
T ss_pred H-HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEE
Confidence 8 8999888876331 0245667777765 79999999998888999999999999999
Q ss_pred EeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcC-
Q 027106 137 CGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQG- 215 (228)
Q Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~- 215 (228)
+|..... ....+...+..++.++.+.+... .+.+..++++++++.+.+.+..+++++++++|++.+.++
T Consensus 314 ~g~~~~~-----~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~ 383 (393)
T cd08246 314 CAGTTGY-----NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQ 383 (393)
T ss_pred EcccCCC-----CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCc
Confidence 9865432 12344556667788888876655 356788999999999987777788999999999999998
Q ss_pred CCcceEEEE
Q 027106 216 GNIGKKVVR 224 (228)
Q Consensus 216 ~~~gkvvl~ 224 (228)
+..||+++-
T Consensus 384 ~~~gkvvv~ 392 (393)
T cd08246 384 HHVGNMAVL 392 (393)
T ss_pred cccceEEEe
Confidence 788898874
No 38
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.95 E-value=1.1e-26 Score=174.07 Aligned_cols=216 Identities=20% Similarity=0.261 Sum_probs=177.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+++| ++++++. +||++..+.+|||+.|.+.-++++||+|+-.||++++|.+.+|+|+++|.+-+-+.|+....+.+++
T Consensus 126 Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~ 203 (354)
T KOG0025|consen 126 LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKK 203 (354)
T ss_pred eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHH
Confidence 5788 8889988 9999999999999999999999999999999999999999999999999988888887766655543
Q ss_pred ---HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 82 ---KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 82 ---~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
.+|+++++..++. .-.+........ ++...|||+|+.....+.+.|.+||.++.+|..+. .+...+...+
T Consensus 204 ~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~l 277 (354)
T KOG0025|consen 204 QLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLL 277 (354)
T ss_pred HHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchh
Confidence 5899998765432 111122121223 78999999999988899999999999999999874 4567788899
Q ss_pred Hhhhceeeceecccc------hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCC-CcceEEEEe
Q 027106 158 IYKRIKFQGFLAADH------LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGG-NIGKKVVRI 225 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~ 225 (228)
+.+++.++|+++..| ++...+.+.++.+|+++|+++.+.....+|++...|++...... ..||-++.+
T Consensus 278 IFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 278 IFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 999999999999887 44556889999999999999988877779999999998666554 446666654
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.95 E-value=6.5e-26 Score=187.13 Aligned_cols=212 Identities=19% Similarity=0.162 Sum_probs=164.1
Q ss_pred cccCCCCCCCcchhhhccchhHH---HHHHHH--------HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEE
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGL---TAYAGL--------FEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC---YVV 67 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~---ta~~~l--------~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~---~V~ 67 (228)
++++ |+++++. +++ +..++. +++.++ ....++++|++|+|+|++|++|++++|+|+.+|+ +|+
T Consensus 131 ~~~l-P~~l~~~-~aa-l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 131 CLLI-YEGDGYA-EAS-LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred eEEC-CCCCCHH-HHh-hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 5788 9998887 444 332322 233332 2457889999999999889999999999999864 899
Q ss_pred EEeCCHHHHHHHHHHh--------CCC-ceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEE
Q 027106 68 GSAGSKEKVTLLKDKL--------GFD-DAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAV 136 (228)
Q Consensus 68 ~~~~~~~~~~~~~~~~--------g~~-~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~ 136 (228)
+++.++++++.++ ++ |++ .++++.+.+++.+.+++.+++ ++|+++|++|. ..+..++++++++|+++.
T Consensus 208 ~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~ 286 (410)
T cd08238 208 VTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNF 286 (410)
T ss_pred EEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEE
Confidence 9999999999998 76 665 456665422677788888877 89999999985 788999999999998887
Q ss_pred EeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHc
Q 027106 137 CGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQ 214 (228)
Q Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~ 214 (228)
++.....+ ...+++...++.+++++.|+.... +..++++++++.+|++++ .++.+++|+++.+|++.+.
T Consensus 287 ~~g~~~~~---~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~- 357 (410)
T cd08238 287 FAGPVDKN---FSAPLNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP- 357 (410)
T ss_pred EEccCCCC---ccccccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-
Confidence 75432111 112456677888999999987655 467889999999999988 4677789999999999998
Q ss_pred CCCcceEEEEec
Q 027106 215 GGNIGKKVVRIT 226 (228)
Q Consensus 215 ~~~~gkvvl~~~ 226 (228)
++..||+||.++
T Consensus 358 ~~~~gKvvl~~~ 369 (410)
T cd08238 358 GIPGGKKLIYTQ 369 (410)
T ss_pred ccCCceEEEECC
Confidence 667799999863
No 40
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.95 E-value=5e-26 Score=185.13 Aligned_cols=210 Identities=19% Similarity=0.226 Sum_probs=167.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.+++++.|||+++......++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 143 ~~~l-P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~ 219 (361)
T cd08231 143 IVRV-PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR 219 (361)
T ss_pred eEEC-CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5678 8887777 67777799999999997777777999999998 59999999999999999 9999999999999998
Q ss_pred HHhCCCceeeccChh--hHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHH
Q 027106 81 DKLGFDDAFNYKEET--DLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLD 156 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~--~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 156 (228)
++|++.+++.++.. +....+++.+++ ++|++|||.|+ ..+..++++++++|+++.+|..... .....+...
T Consensus 220 -~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~ 294 (361)
T cd08231 220 -EFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPER 294 (361)
T ss_pred -HcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHH
Confidence 99998888766431 223567777776 89999999986 6788999999999999999965421 112344456
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcC--C--CccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG--A--IYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++.+++++.+++... .+.++++++++.++ . +.+.+.++++++++++||+.+.++.. +|+||++
T Consensus 295 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 295 IVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 788899998887654 34566777777766 3 44456777899999999999988774 7999864
No 41
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.95 E-value=1.1e-25 Score=180.36 Aligned_cols=214 Identities=25% Similarity=0.280 Sum_probs=180.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++.+.+||+++....++.+|++|||+|++|++|++++++|+.+|++|+++++++++.+.++
T Consensus 104 ~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 180 (323)
T cd05282 104 LIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK- 180 (323)
T ss_pred eEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-
Confidence 4678 8888887 788888999999999988888999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++..+. ++...+.+.+++ ++|+++||+|+......+++++++|+++.+|..... ....+...+..+
T Consensus 181 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~ 254 (323)
T cd05282 181 ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFK 254 (323)
T ss_pred hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhc
Confidence 8999888888765 777788888776 899999999998778899999999999999865431 123344444458
Q ss_pred hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
++++.++....+ +....+.+.++++++.++++.+.....++++++.+||+.+.++...+|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 255 DITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred CceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 888888776543 3345578899999999999987767778999999999999988888898863
No 42
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.95 E-value=9.3e-26 Score=181.63 Aligned_cols=203 Identities=22% Similarity=0.319 Sum_probs=172.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++.+.|||+++.. .++++|++|||+| +|++|++++++|+.+|++|+++++++++.+.++
T Consensus 130 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~- 204 (333)
T cd08296 130 LARI-PDDLDAA-EAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR- 204 (333)
T ss_pred eEeC-CCCCCHH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-
Confidence 5688 9999988 788899999999999955 5899999999999 799999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|+++++++.+. ++...+++. +++|+++|+.| +..+..++++++++|+++.+|.... ..+.+...++.+
T Consensus 205 ~~g~~~~i~~~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~ 275 (333)
T cd08296 205 KLGAHHYIDTSKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMG 275 (333)
T ss_pred HcCCcEEecCCCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhc
Confidence 9999888888765 666666654 36999999986 5788999999999999999997542 224555667789
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
++++.++.... ...+..+++++.++++++.+ ..++++++.+||+.+.+++..||+|++
T Consensus 276 ~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 276 RKSIHGWPSGT-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred ccEEEEeCcCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 99999987554 35677888899999988764 468999999999999999989999874
No 43
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=9.8e-26 Score=182.62 Aligned_cols=206 Identities=21% Similarity=0.234 Sum_probs=170.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++++++++.|||+++ ...++++|++|||+|++|++|++++++|+.+|++|+++++++ +.+.++
T Consensus 144 ~~~i-p~~~~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~- 218 (350)
T cd08274 144 AYPV-NSPLSDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR- 218 (350)
T ss_pred ceeC-CCCCCHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-
Confidence 5688 9999888 7889999999999998 778999999999999989999999999999999999888665 778887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+.+.... ...+ ...+.+ ++|++||++|++.+..++++++++|+++.+|...+. ....+...++.+
T Consensus 219 ~~g~~~~~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~ 290 (350)
T cd08274 219 ALGADTVILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-----VVELDLRTLYLK 290 (350)
T ss_pred hcCCeEEEeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-----cccCCHHHhhhc
Confidence 8998765554433 3333 444454 899999999999999999999999999999864321 123455666788
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++++.++.... .+.+.++++++.++++++.+...++++++.+|++.+.++...+|+++++
T Consensus 291 ~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 291 DLTLFGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ceEEEEeecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 88888877654 5778899999999999887777789999999999999888888999864
No 44
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.95 E-value=2.1e-25 Score=179.19 Aligned_cols=219 Identities=49% Similarity=0.773 Sum_probs=176.4
Q ss_pred cccCCCCCCC--cchhhhc-cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFP--LSYQVGI-LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~--~~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 78 (228)
++++ |++++ +. ++++ +++++.|||+++....++.+|++|||+|++|++|++++|+|+..|++|+++++++++.+.
T Consensus 108 ~~~l-P~~~~~~~~-~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~ 185 (329)
T cd05288 108 LRKL-DPSLGLPLS-AYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW 185 (329)
T ss_pred cEEC-CcccCCCHH-HHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 4678 88885 33 3444 899999999999887889999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
+++.+|++++++..+. ++...+.+.+++++|+++||+|+..+..++++++++|+++.+|..............+....+
T Consensus 186 ~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd05288 186 LVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNII 264 (329)
T ss_pred HHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHh
Confidence 9833999888888765 777777777655899999999999999999999999999999875432110000012345566
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
.+++++.++..........+.+.++++++.+|.+++.....++++++.++++.+.+++..+|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 265 TKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 78888888766543333456788999999999998876677899999999999988887788874
No 45
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.95 E-value=2e-25 Score=183.71 Aligned_cols=212 Identities=20% Similarity=0.254 Sum_probs=175.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHH--hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE--IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL 79 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~ 79 (228)
++++ |+++++. +++.+.+.+.|||+++.. ..++.+|++|+|+|++|++|++++|+|+.+|++++++++++++.+.+
T Consensus 153 ~~~v-P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~ 230 (398)
T TIGR01751 153 LMPK-PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC 230 (398)
T ss_pred eEEC-CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 5678 9999988 788889999999999865 47889999999999999999999999999999999888899999999
Q ss_pred HHHhCCCceeeccCh---------------------hhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEE
Q 027106 80 KDKLGFDDAFNYKEE---------------------TDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~---------------------~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~ 137 (228)
+ ++|++.++|+++. ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+
T Consensus 231 ~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~ 309 (398)
T TIGR01751 231 R-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVIC 309 (398)
T ss_pred H-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEE
Confidence 9 8999888876432 0245566777765 899999999988889999999999999999
Q ss_pred eeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCC
Q 027106 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGN 217 (228)
Q Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~ 217 (228)
|.....+ ...+...++.++..+.+..... .+.+.+++++++++++.+.+..++++++++++|+.+.++..
T Consensus 310 g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~ 379 (398)
T TIGR01751 310 GGTTGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHH 379 (398)
T ss_pred ccccCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCC
Confidence 9765321 1334455566777777766554 24467899999999998877778899999999999999998
Q ss_pred cceEEEEec
Q 027106 218 IGKKVVRIT 226 (228)
Q Consensus 218 ~gkvvl~~~ 226 (228)
.||+|++++
T Consensus 380 ~gkvvv~~~ 388 (398)
T TIGR01751 380 QGNVAVLVL 388 (398)
T ss_pred CceEEEEeC
Confidence 899999875
No 46
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=1.2e-25 Score=181.30 Aligned_cols=204 Identities=25% Similarity=0.282 Sum_probs=168.0
Q ss_pred CCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-hC
Q 027106 7 PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDK-LG 84 (228)
Q Consensus 7 P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~-~g 84 (228)
|++++. ++++|..++.|++++........++++|+|+|+ |++|++++++++..|+ +|++++.+++|+++++ + .|
T Consensus 139 pd~~~~--~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~-~~~g 214 (350)
T COG1063 139 PDGIDE--EAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAK-EAGG 214 (350)
T ss_pred CCCCCh--hhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HhCC
Confidence 777633 599999999999888655666667779999995 9999999999999998 8999999999999999 6 66
Q ss_pred CCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhc
Q 027106 85 FDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRI 162 (228)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 162 (228)
++.+.+..+. +....+.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|...+.. ...+...++.+++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel 288 (350)
T COG1063 215 ADVVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKEL 288 (350)
T ss_pred CeEeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhccc
Confidence 6666665554 667778888888 99999999997 47899999999999999999876421 1466788999999
Q ss_pred eeeceec-ccchhHHHHHHHHHHHHHHcCCCccccc--eecccCcHHHHHHHhHcCCC-cceEEEEe
Q 027106 163 KFQGFLA-ADHLNLYQDFISTTCNHLRSGAIYPLED--ISDGVESIPSAFTGLFQGGN-IGKKVVRI 225 (228)
Q Consensus 163 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~~~~~A~~~~~~~~~-~gkvvl~~ 225 (228)
++.|+.. .. +..++.+++++.+|++.+... ..++++++++|++.+.+.+. ..|+++.+
T Consensus 289 ~l~gs~~~~~-----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 289 TLRGSLRPSG-----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EEEeccCCCC-----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999854 33 367899999999999998643 44589999999999988654 56988864
No 47
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.94 E-value=4e-25 Score=177.80 Aligned_cols=218 Identities=25% Similarity=0.344 Sum_probs=179.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++++.+||+++....++++|++|+|+|++|++|++++++|+.+|++++++++++++.+.++
T Consensus 106 ~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 182 (334)
T PTZ00354 106 VMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK- 182 (334)
T ss_pred cEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 9999888 788899999999999988889999999999999999999999999999999888888999999998
Q ss_pred HhCCCceeeccChhh-HHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKEETD-LKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~-~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|.+.+++.... + +...+++.+++ ++|++||+.++..+..++++++++|+++.+|...+.++ ...+...+..
T Consensus 183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~----~~~~~~~~~~ 257 (334)
T PTZ00354 183 KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKV----EKFNLLPLLR 257 (334)
T ss_pred HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcc----cccCHHHHHh
Confidence 8999888877654 4 77778877766 89999999998999999999999999999986443211 0144555566
Q ss_pred hhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106 160 KRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227 (228)
Q Consensus 160 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~ 227 (228)
++.++.+...... +....+.++.+++++.++.+.+.+...+++++++++++.+.++...+|+++.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 258 KRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred hCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 7767777654431 2233456788889999999987776778999999999999988878899998754
No 48
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.94 E-value=2.8e-25 Score=179.36 Aligned_cols=216 Identities=23% Similarity=0.258 Sum_probs=176.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVT 77 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~ 77 (228)
++++ |++++.. +++.+++.++|||+++.....+++|++|||+|++|++|++++|+|+..|++|+++++++ ++.+
T Consensus 112 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (341)
T cd08290 112 LIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKE 189 (341)
T ss_pred eEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHH
Confidence 4678 9999888 88899999999999997778899999999999999999999999999999999888765 6678
Q ss_pred HHHHHhCCCceeeccCh--hhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106 78 LLKDKLGFDDAFNYKEE--TDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML 155 (228)
Q Consensus 78 ~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 155 (228)
.++ ++|++++++.... .++...++...++++|++|||+|+..+...+++++++|+++.+|..... ....+..
T Consensus 190 ~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~ 263 (341)
T cd08290 190 RLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTS 263 (341)
T ss_pred HHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHH
Confidence 887 8999888876542 0455666665554799999999998888899999999999999864321 1233444
Q ss_pred HHHhhhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceec---ccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 156 DVIYKRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISD---GVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
..+.+++++.+...... +......+..+++++.+|.+.+.....+ +++++.+|++.+.++...+|+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 264 LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 56788999998876542 2333457889999999999988766677 9999999999999988889999864
No 49
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.94 E-value=5.8e-25 Score=175.72 Aligned_cols=210 Identities=20% Similarity=0.244 Sum_probs=170.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++++.|||+++....++++|++|||+|++|++|.+++|+|+.+|++|++++.++++.+.++
T Consensus 108 ~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 184 (320)
T cd08243 108 VYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK- 184 (320)
T ss_pred cEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 9999888 789999999999999988888999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH--Hh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV--IY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~--~~ 159 (228)
++|++++++. .. ++.+.+++. ++++|+++|++++..+...+++++++|+++.+|...+... ......... +.
T Consensus 185 ~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~---~~~~~~~~~~~~~ 258 (320)
T cd08243 185 ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWT---LEDFNPMDDIPSG 258 (320)
T ss_pred hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcc---cCCcchhhhhhhc
Confidence 8999877654 33 666777777 4589999999999899999999999999999997543210 001111111 25
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+++.+.++..... ....++.+++++.++.+++.+...++++++++|++.+.++...+|+++
T Consensus 259 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 259 VNLTLTGSSSGDV---PQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cceEEEecchhhh---hHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 6666666654331 235788899999999998776677899999999999998888889876
No 50
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.94 E-value=1.2e-24 Score=173.50 Aligned_cols=215 Identities=25% Similarity=0.297 Sum_probs=178.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++.++++++++....++.+|++|+|+|++|++|++++++++.+|++|+++++++++.+.++
T Consensus 102 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 178 (320)
T cd05286 102 LVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR- 178 (320)
T ss_pred ceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence 4678 8888888 788889999999999988899999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++++++..+. ++...+...+.+ ++|+++||.++.....++++++++|+++.+|..... ....+...+..+
T Consensus 179 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~ 252 (320)
T cd05286 179 AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKG 252 (320)
T ss_pred HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhc
Confidence 8999888877665 777788877766 899999999988889999999999999999865421 112334444477
Q ss_pred hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++++.+.....+ +....+.+..+++++.++.+.+.....++++++.+|++.+.++...+|+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 253 SLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred CcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 888776543322 33445677889999999998877667789999999999999888888999864
No 51
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.94 E-value=6.7e-25 Score=177.19 Aligned_cols=208 Identities=25% Similarity=0.332 Sum_probs=175.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. ++++++..+.|||+++.. .+++++++|||+|+.+++|++++++|+.+|++|+++++++++.+.++
T Consensus 132 ~~~l-p~~~~~~-~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 207 (341)
T cd08297 132 VTPI-PDGLSFE-QAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK- 207 (341)
T ss_pred EEEC-CCCCCHH-HHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-
Confidence 5678 9999988 788899999999999955 58999999999999888999999999999999999999999999997
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcc-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVG-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|++.++++.+. ++...+.+.+++ ++|+++|+.+ +.....++++++++|+++.+|..... ....+......
T Consensus 208 ~~g~~~v~~~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~ 281 (341)
T cd08297 208 ELGADAFVDFKKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVL 281 (341)
T ss_pred HcCCcEEEcCCCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHh
Confidence 8999888888765 777788877765 8999999666 47889999999999999999865421 12344556667
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+++++.+..... .+.++.+++++.++++.+.+ ..++++++++|++.+.++...||+++++
T Consensus 282 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 282 RGITIVGSLVGT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cccEEEEeccCC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 888888765543 47788899999999997644 5679999999999999998889999875
No 52
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.94 E-value=6.3e-25 Score=179.03 Aligned_cols=210 Identities=26% Similarity=0.355 Sum_probs=174.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
+.++ |++++.. +++.++..++|||+++.....+.+|++|||+| +|++|++++++|+..|++ |++++.++++.+.++
T Consensus 153 ~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~ 229 (367)
T cd08263 153 LAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK 229 (367)
T ss_pred EEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 4678 9999988 89999999999999998888889999999996 699999999999999997 888988999999988
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.+++.+.. ++...++...++ ++|++||++++. ....++++++++|+++.+|..... .....+...++
T Consensus 230 -~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~ 303 (367)
T cd08263 230 -ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLV 303 (367)
T ss_pred -HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHh
Confidence 8999888888766 777778777665 899999999986 899999999999999999864421 11234445555
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.+++++.++..... ++.++.++++++++.+.+. +...++++++.+|++.+.++...||+|++
T Consensus 304 ~~~~~~~~~~~~~~----~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 304 RRGIKIIGSYGARP----RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred hCCeEEEecCCCCc----HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 67888777543221 4678899999999999874 45667999999999999998888999874
No 53
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.94 E-value=9e-25 Score=175.30 Aligned_cols=214 Identities=22% Similarity=0.337 Sum_probs=164.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhc--C-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIG--K-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~--~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 78 (228)
++++ |+++++. +++.+++.+.||+.++.... . ...+++|||+|++|++|.+++|+|+.+|++|+++++++++.+.
T Consensus 109 ~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (326)
T cd08289 109 VVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY 186 (326)
T ss_pred eEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 4678 9999988 88899999999999885433 2 3457899999999999999999999999999999999999999
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++ ++|++++++..+. ....+...+++++|+++|++|+..+..++++++++|+++.+|..... ....+...++
T Consensus 187 ~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~-----~~~~~~~~~~ 258 (326)
T cd08289 187 LK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGG-----EVETTVFPFI 258 (326)
T ss_pred HH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCC-----CCCcchhhhh
Confidence 98 8999888776542 24455555444899999999998899999999999999999976421 1123345566
Q ss_pred hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++++.++..... .....+.++.+...+..+.+...+..+++++++.+||+.+.+++..||+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 259 LRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred hccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 78899888754321 11223445555544433333344577789999999999999998889999864
No 54
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.94 E-value=1e-24 Score=178.66 Aligned_cols=214 Identities=15% Similarity=0.182 Sum_probs=159.4
Q ss_pred cccCCCCCCCcc---hhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHH
Q 027106 2 LRKFDPMGFPLS---YQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV-VGSAGSKEKVT 77 (228)
Q Consensus 2 ~~~v~P~~~~~~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V-~~~~~~~~~~~ 77 (228)
++++ |++++.. ..++++.+++.++|+++ ...++++|++|||.| +|++|++++|+|+.+|+++ ++++.++++++
T Consensus 148 l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 148 LLKF-PDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred eEEC-CCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 6788 8776532 14678889999999998 468899999999976 5999999999999999964 55567888999
Q ss_pred HHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh---------------HHHHHHHccccCcEEEEEeeec
Q 027106 78 LLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE---------------MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+++ ++|++. ++.....++.+.+.+.+++ ++|++||++|.+ .++.++++++++|+++.+|...
T Consensus 225 ~a~-~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~ 302 (393)
T TIGR02819 225 QAR-SFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV 302 (393)
T ss_pred HHH-HcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence 999 999974 5443222666777777776 899999999974 7999999999999999999863
Q ss_pred c-cCCCc------CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cc-eecccCcHHHHHHH
Q 027106 142 E-YTDGK------KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--ED-ISDGVESIPSAFTG 211 (228)
Q Consensus 142 ~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~-~~~~~~~~~~A~~~ 211 (228)
. ..... ....+.......+++++.+..... .+++.++++++.+|++++. +. .++||+|+++||+.
T Consensus 303 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 303 TEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred CcccccccccccccccccchHHhhccCceEEeccCCh-----hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 2 11000 011222344445556655532221 2445789999999998864 34 56899999999999
Q ss_pred hHcCCCcceEEEEec
Q 027106 212 LFQGGNIGKKVVRIT 226 (228)
Q Consensus 212 ~~~~~~~gkvvl~~~ 226 (228)
+.+++. +|++|+++
T Consensus 378 ~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 378 FDAGAA-KKFVIDPH 391 (393)
T ss_pred HhhCCc-eEEEEeCC
Confidence 988754 79999875
No 55
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.94 E-value=1.2e-24 Score=175.63 Aligned_cols=205 Identities=23% Similarity=0.280 Sum_probs=171.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLL 79 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~ 79 (228)
++++ |++++.. +++++++.++|||+++... ..+.+|++|||+|+ |++|++++|+|+.+| .+|+++++++++.+.+
T Consensus 132 ~~~~-P~~ls~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~ 208 (340)
T cd05284 132 LVKL-PRGLDPV-EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLA 208 (340)
T ss_pred eEEC-CCCCCHH-HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence 5678 9999888 8999999999999999776 57889999999995 779999999999999 7999999999999999
Q ss_pred HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
+ ++|++++++++. .+...+++.+++ ++|+++|++|+ .....++++++++|+++.+|.... ...+....
T Consensus 209 ~-~~g~~~~~~~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~ 278 (340)
T cd05284 209 E-RLGADHVLNASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDL 278 (340)
T ss_pred H-HhCCcEEEcCCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHh
Confidence 8 999988887765 366677777766 89999999996 788999999999999999986542 12233444
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+.+++++.+..... .+.+..+++++.++.+++. ...++++++++|++.+.+++..||+++.+
T Consensus 279 ~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 279 VPTEISVIGSLWGT-----RAELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred hhcceEEEEEeccc-----HHHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 57888888876544 4678889999999998864 44679999999999999998889999864
No 56
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.94 E-value=2.2e-24 Score=173.23 Aligned_cols=215 Identities=21% Similarity=0.215 Sum_probs=170.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++.+.+||+++...+++++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++
T Consensus 106 ~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~- 182 (327)
T PRK10754 106 AAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK- 182 (327)
T ss_pred ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 9998888 788888999999999988889999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++.... ++.+.+++.+++ ++|+++||+++......+++++++|+++.+|..... ....+...+..+
T Consensus 183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~ 256 (327)
T PRK10754 183 KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQK 256 (327)
T ss_pred HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhcc
Confidence 8999888877765 788888888876 899999999998889999999999999999865421 111222222222
Q ss_pred hce-eeceeccc---chhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIK-FQGFLAAD---HLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+.. ........ .+....+.+..+++++.+|++++. ....++++++.+|++.+.++...+|+||.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 257 GSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred CceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 211 11111111 122334567788999999999864 356779999999999999998889999863
No 57
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.94 E-value=1.3e-24 Score=174.18 Aligned_cols=213 Identities=22% Similarity=0.341 Sum_probs=166.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCC--C-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKP--K-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 78 (228)
++++ |+++++. +++.+++.+.+||.++....+. . .+++|+|+|++|++|++++|+|+.+|++|+++++++++.+.
T Consensus 109 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (325)
T cd05280 109 VVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADY 186 (325)
T ss_pred EEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 5688 9999988 8999999999999998665433 5 45799999999999999999999999999999999999999
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++ ++|++++++..+. . ....+...++++|+++|++++..+..++++++++|+++.+|.....+ ...+...++
T Consensus 187 ~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~ 258 (325)
T cd05280 187 LK-SLGASEVLDREDL-L-DESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFI 258 (325)
T ss_pred HH-hcCCcEEEcchhH-H-HHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCc-----cccccchhe
Confidence 98 8999888776532 1 22223333348999999999999999999999999999999754321 123344455
Q ss_pred hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++++.+...... +....+.++.+.+++..+. .+.+..+++++++++|++.+.+++..||+|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 259 LRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL-LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC-ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 68888888765543 2233466777777777774 444667789999999999999999889999864
No 58
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.94 E-value=5.4e-25 Score=178.63 Aligned_cols=202 Identities=18% Similarity=0.196 Sum_probs=153.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHh------cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---C
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI------GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG---S 72 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~------~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~---~ 72 (228)
++++ |++++ . ++++.+++.+++.++... .++++|++|+|+|+ |++|++++|+|+.+|++|+++++ +
T Consensus 134 ~~~~-P~~~~-~--~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~ 208 (355)
T cd08230 134 LVKV-PPSLA-D--VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPP 208 (355)
T ss_pred EEEC-CCCCC-c--ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCC
Confidence 5788 99987 4 566667777766555332 23679999999995 99999999999999999999987 6
Q ss_pred HHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCc
Q 027106 73 KEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAA 151 (228)
Q Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 151 (228)
+++.+.++ ++|++. +++.+. ++.+ .. ..+++|+||||+|+ ..+..++++++++|+++.+|...+. ....
T Consensus 209 ~~~~~~~~-~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~ 278 (355)
T cd08230 209 DPKADIVE-ELGATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFE 278 (355)
T ss_pred HHHHHHHH-HcCCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----Cccc
Confidence 88989998 999986 555543 4433 21 12489999999997 4789999999999999999976541 1112
Q ss_pred cc----hHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCC------CccccceecccCcHHHHHHHhHcCCCcceE
Q 027106 152 PE----MLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGA------IYPLEDISDGVESIPSAFTGLFQGGNIGKK 221 (228)
Q Consensus 152 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------i~~~~~~~~~~~~~~~A~~~~~~~~~~gkv 221 (228)
++ ...++.+++++.|+.... .+.++.+++++.++. +++.++.+++++|+.+||+.+.++. .|+
T Consensus 279 ~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~ 351 (355)
T cd08230 279 VDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKV 351 (355)
T ss_pred cChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEE
Confidence 22 345677999999987655 355677888887766 5666778899999999999887654 599
Q ss_pred EEEe
Q 027106 222 VVRI 225 (228)
Q Consensus 222 vl~~ 225 (228)
+|+|
T Consensus 352 v~~~ 355 (355)
T cd08230 352 VIEW 355 (355)
T ss_pred EeeC
Confidence 9875
No 59
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.94 E-value=6.7e-25 Score=177.03 Aligned_cols=196 Identities=18% Similarity=0.157 Sum_probs=150.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHH-cC-CEEEEEeCCHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKL-FG-CYVVGSAGSKEKVT 77 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~g-~~V~~~~~~~~~~~ 77 (228)
++++ |++++++ .|++..+++++|+++... ..+++|++|||.|+ |++|++++|+++. .| .+|+++++++++++
T Consensus 128 ~~~v-P~~l~~~--~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~ 203 (341)
T cd08237 128 LVKL-PDNVDPE--VAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLD 203 (341)
T ss_pred eEEC-CCCCChH--HhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHH
Confidence 5788 9999987 556778999999998543 45789999999995 9999999999986 55 48999999999999
Q ss_pred HHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch----hHHHHHHHccccCcEEEEEeeecccCCCcCCCcc
Q 027106 78 LLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA----EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAP 152 (228)
Q Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 152 (228)
+++ +++.+..++ ++ ..+ ++|+|||++|+ ..+..++++++++|+++.+|...+ ...+
T Consensus 204 ~a~-~~~~~~~~~-----~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~ 264 (341)
T cd08237 204 LFS-FADETYLID-----DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPI 264 (341)
T ss_pred HHh-hcCceeehh-----hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------Cccc
Confidence 998 666543221 11 122 69999999994 478999999999999999996432 1245
Q ss_pred chHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcC-----CCccccceecccC---cHHHHHHHhHcCCCcceEEEE
Q 027106 153 EMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG-----AIYPLEDISDGVE---SIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~i~~~~~~~~~~~---~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+...++.+++++.|+.... .+.++++++++.++ .+++.++.+|+++ ++.+||+...++ ..||+||+
T Consensus 265 ~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~ 338 (341)
T cd08237 265 NTRMVLEKGLTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVME 338 (341)
T ss_pred CHHHHhhCceEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEE
Confidence 5667788999999887654 35688899999998 4666777788886 455555555444 57899998
Q ss_pred ec
Q 027106 225 IT 226 (228)
Q Consensus 225 ~~ 226 (228)
++
T Consensus 339 ~~ 340 (341)
T cd08237 339 WE 340 (341)
T ss_pred ee
Confidence 74
No 60
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.94 E-value=1e-24 Score=176.83 Aligned_cols=210 Identities=21% Similarity=0.233 Sum_probs=166.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.++..++||++++ ...++++|++|||+| +|++|++++|+|+.+|+ .|+++++++++.++++
T Consensus 133 ~~~l-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~ 208 (351)
T cd08285 133 LAPL-PDGLTDE-QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK 208 (351)
T ss_pred eEEC-CCCCCHH-HhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 5678 9898888 7888889999999997 678999999999997 59999999999999999 6888988999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccc--hHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPE--MLD 156 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~ 156 (228)
++|+++++++.+. ++...+.+.+.+ ++|+++|++|+ ..+..++++++++|+++.+|...... ....+ ...
T Consensus 209 -~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~ 282 (351)
T cd08285 209 -EYGATDIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWG 282 (351)
T ss_pred -HcCCceEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhh
Confidence 8999888888765 777788777766 89999999997 58899999999999999998754311 11111 111
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc---ccceecccCcHHHHHHHhHcCCC-cceEEEEe
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP---LEDISDGVESIPSAFTGLFQGGN-IGKKVVRI 225 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~ 225 (228)
...+...+.+..... .++.++++++++.+|++++ .+...++++++++|++.+.+++. ..|++|++
T Consensus 283 ~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 283 VGMGHKTINGGLCPG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred hhccccEEEEeecCC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 223444554433211 1367888999999999988 23445799999999999999874 67999864
No 61
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.94 E-value=5.7e-25 Score=172.90 Aligned_cols=187 Identities=18% Similarity=0.207 Sum_probs=151.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+.+.+.|+|+++. .....+|++|||+|+ |++|++++|+|+.+|++ |++++.++++.++++
T Consensus 87 ~~~l-P~~~~~~-~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~ 162 (280)
T TIGR03366 87 IVPV-PDDLPDA-VAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELAL 162 (280)
T ss_pred EEEC-CCCCCHH-HhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 6789 9999988 78888999999999994 456679999999985 99999999999999995 888988999999999
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.+++..+ ..+.+++.+.+ ++|++||++|. ..+..++++++++|+++.+|...+. ...+.++..++
T Consensus 163 -~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~ 234 (280)
T TIGR03366 163 -SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVV 234 (280)
T ss_pred -HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHH
Confidence 999988877643 24455666665 89999999986 5789999999999999999965321 12245677888
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcC--CCc--cccceecccCcH
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSG--AIY--PLEDISDGVESI 205 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~i~--~~~~~~~~~~~~ 205 (228)
.+++++.|+.... .+.++++++++.++ ++. +.++.+||++|+
T Consensus 235 ~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 235 RRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred hCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 9999999987655 46789999999975 443 345666788763
No 62
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.93 E-value=2.7e-24 Score=173.95 Aligned_cols=210 Identities=22% Similarity=0.278 Sum_probs=175.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.++.+++|||+++....++.++++|+|+| .|++|++++|+|+..|++|++++.++++.+.++
T Consensus 131 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~- 206 (345)
T cd08260 131 LVRL-PDDVDFV-TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR- 206 (345)
T ss_pred eEEC-CCCCCHH-HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-
Confidence 5678 9999888 78889999999999998888999999999999 699999999999999999999999999999998
Q ss_pred HhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|++++++.++ . ++...+....++++|++||+.|+ ..+...+++++++|+++.+|....... ....+...+..
T Consensus 207 ~~g~~~~i~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~ 282 (345)
T cd08260 207 ELGAVATVNASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVA 282 (345)
T ss_pred HhCCCEEEccccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhh
Confidence 899988888876 4 77777777665589999999985 688899999999999999987543210 12334455557
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+++++.+..... .+.++.+++++.++++.+. +...++++++++|++.+.++...+|+|++
T Consensus 283 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 283 RELEIVGSHGMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred cccEEEeCCcCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 788888776544 4678889999999998764 45667999999999999999888898864
No 63
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.93 E-value=2.5e-24 Score=173.50 Aligned_cols=209 Identities=16% Similarity=0.225 Sum_probs=166.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCC-----CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKK-----GEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEK 75 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~ 75 (228)
++++ |+++++. +++.+++.++|||+++....++++ |++|||+|++|++|++++|+|+.+ |++|+++++++++
T Consensus 109 ~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~ 186 (336)
T TIGR02817 109 VGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPES 186 (336)
T ss_pred cccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHH
Confidence 5678 9999988 888999999999999988888887 999999999999999999999998 9999999999999
Q ss_pred HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106 76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM 154 (228)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 154 (228)
.+.++ ++|+++++++.. ++...+++..++++|+++|+.+ +......+++++++|+++.++... ..+.
T Consensus 187 ~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~ 254 (336)
T TIGR02817 187 QEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDI 254 (336)
T ss_pred HHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccc
Confidence 99998 899988887553 5666777654448999999975 478899999999999999875321 2233
Q ss_pred HHHHhhhceeeceecc--c-c--hhHH--HHHHHHHHHHHHcCCCccccceec---ccCcHHHHHHHhHcCCCcceEEEE
Q 027106 155 LDVIYKRIKFQGFLAA--D-H--LNLY--QDFISTTCNHLRSGAIYPLEDISD---GVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 155 ~~~~~~~~~~~~~~~~--~-~--~~~~--~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
..+..+++++.+.... . . +... ...++++++++.++.+++.+...+ +++++++|++.+.+++..||++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 255 SPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred hhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 3444455666653322 1 1 1111 256899999999999987655555 468999999999999888999875
No 64
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.93 E-value=2e-24 Score=174.98 Aligned_cols=208 Identities=18% Similarity=0.238 Sum_probs=172.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+.+.++|||+++.....+++|++|+|+| +|++|++++|+|+.+|+ +|++++.++++.+.++
T Consensus 141 ~~~~-p~~~s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~ 217 (350)
T cd08240 141 YLVD-PGGLDPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK 217 (350)
T ss_pred eeeC-CCCCCHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 3567 9999988 78889999999999998777777999999996 69999999999999999 7899998999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|++.+++..+. ++.+.+.+..++++|++||+.|. ..+..++++|+++|+++.+|..... ...+......
T Consensus 218 -~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~ 289 (350)
T cd08240 218 -AAGADVVVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPL 289 (350)
T ss_pred -HhCCcEEecCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhh
Confidence 8999888877665 66666776655589999999985 7899999999999999999865431 1222333445
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+++++.+..... .+.+..++++++++.+++.....++++++.+|++.+.++...||+++++
T Consensus 290 ~~~~i~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 290 RALTIQGSYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred cCcEEEEcccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 788887776655 3678889999999999877677789999999999999888889999853
No 65
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.93 E-value=1.9e-24 Score=176.06 Aligned_cols=211 Identities=26% Similarity=0.342 Sum_probs=172.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.++++++||+.++.....+++|++|||+| .|++|++++|+|+..|+ .|+++++++++.+.++
T Consensus 152 ~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~ 228 (365)
T cd08278 152 VVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAK 228 (365)
T ss_pred EEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 5788 9999988 88999999999999998888999999999997 59999999999999999 6888988999999888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|++.++++.+. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|..... .....+...++.
T Consensus 229 -~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~ 302 (365)
T cd08278 229 -ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVNDLLV 302 (365)
T ss_pred -HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHHHHhh
Confidence 8999888887765 77777777774489999999986 6889999999999999999865321 122445556657
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc-ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP-LEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+++++.++..... ...+.++++++++.++++.+ .+...++++++++|++.+.+++.. |++|+
T Consensus 303 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 303 SGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred cCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 8888887765332 11467788999999999865 344567999999999999887654 88774
No 66
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.93 E-value=3.4e-24 Score=171.82 Aligned_cols=212 Identities=23% Similarity=0.338 Sum_probs=167.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGE-KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~-~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 78 (228)
++++ |++++.. +++.+++.+.+|+.++... +.+.+|+ +|+|+|++|++|.+++++|+.+|++|++++.++++.+.
T Consensus 108 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~ 185 (323)
T TIGR02823 108 LVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDY 185 (323)
T ss_pred eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 5688 9999888 7888999999999887544 3488999 99999999999999999999999999998888888899
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++ ++|++.+++..+. +. .++....+++|+++||+|++.+..++++++++|+++.+|..... ....+...++
T Consensus 186 ~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~ 256 (323)
T TIGR02823 186 LK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFI 256 (323)
T ss_pred HH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHh
Confidence 97 8999887776543 32 44444444799999999998889999999999999999975321 1122334555
Q ss_pred hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++++.+...... .....+.+..+.+++..+.+.+. ...++++++++||+.+.+++..+|+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 257 LRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred hcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 78888888664422 22334567788888888888764 44679999999999999999889999863
No 67
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=4.4e-24 Score=169.78 Aligned_cols=205 Identities=24% Similarity=0.264 Sum_probs=166.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++++++.+.|||+++...... +|++|+|+|++|++|.+++++|+..|++|+.+++++++.+.++
T Consensus 99 ~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 174 (305)
T cd08270 99 LAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR- 174 (305)
T ss_pred eEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 5688 9999998 8899999999999999766655 5999999999999999999999999999999999999999999
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh--
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY-- 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-- 159 (228)
++|++.+++... + ..++++|+++|++|+..+..++++++++|+++.+|..... ....+...+..
T Consensus 175 ~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~ 240 (305)
T cd08270 175 ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGE-----PAVFNPAAFVGGG 240 (305)
T ss_pred HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCC-----cccccHHHHhccc
Confidence 799875543321 1 1224799999999998889999999999999999865421 12233444433
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++.++.++.... +....+.+..+++++.++++.+.+..+++++++++|++.+.++...||+|+.+
T Consensus 241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 241 GGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred ccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 578888777654 33345778999999999999987777789999999999999988889999864
No 68
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.93 E-value=7.4e-24 Score=170.24 Aligned_cols=216 Identities=37% Similarity=0.540 Sum_probs=172.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++ .. +++++++++.|||+++....++++|++|+|+|++|++|++++|+|+..|++|+++++++++.+.++
T Consensus 107 ~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 181 (329)
T cd08250 107 AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK- 181 (329)
T ss_pred eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-
Confidence 4567 765 23 578899999999999988889999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-----CCCccchHH
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-----KRAAPEMLD 156 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~~~~~ 156 (228)
++|++.+++..+. ++...+.+..++++|++||+.|+..+..++++++++|+++.+|......... ..... ...
T Consensus 182 ~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~ 259 (329)
T cd08250 182 SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL-PPK 259 (329)
T ss_pred HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccc-cHH
Confidence 8998888776654 6666666655458999999999989999999999999999998654310000 00111 234
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcccc--ceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLE--DISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.+.+++++.++....+.....+.+.++++++.++.+.+.. ...++++++.+|++.+.++...+|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 260 LLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 5678888888876544333467788999999999988743 3347999999999999988878899874
No 69
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.93 E-value=6.8e-24 Score=170.96 Aligned_cols=206 Identities=26% Similarity=0.380 Sum_probs=172.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.++.++.|||+++....+++++++|||.| +|++|++++++|+..|++|++++.++++.+.++
T Consensus 131 ~~~l-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~- 206 (338)
T cd08254 131 LVPV-PDGVPFA-QAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK- 206 (338)
T ss_pred eEEC-CCCCCHH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence 5678 9999888 88889999999999998888899999999976 699999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|.+.+++..+. ...+.+ ....+ ++|+++||.|. ..+..++++|+++|+++.+|.... ....+...+..
T Consensus 207 ~~g~~~~~~~~~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~ 278 (338)
T cd08254 207 ELGADEVLNSLDD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIA 278 (338)
T ss_pred HhCCCEEEcCCCc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhh
Confidence 8999887776654 555555 44444 89999999985 688999999999999999986432 12344556677
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++.++.+++... .+.+..++++++++.+.+. ...++++++.++++.+.+++..+|+|+++
T Consensus 279 ~~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 279 RELRIIGSFGGT-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CccEEEEeccCC-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 888888766554 5778889999999999876 55679999999999999999889999875
No 70
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=9.6e-24 Score=169.84 Aligned_cols=208 Identities=25% Similarity=0.393 Sum_probs=177.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++.+++||+++....++++|++|+|+| +|++|++++++|+..|++|++++.++++.+.++
T Consensus 126 ~~~l-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~- 201 (336)
T cd08276 126 LVRA-PDHLSFE-EAATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK- 201 (336)
T ss_pred eEEC-CCCCCHH-HhhhhhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 8888887 78888999999999998888999999999996 699999999999999999999999999999998
Q ss_pred HhCCCceeeccC-hhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKE-ETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~-~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|.+.+++... . ++...+++.+++ ++|+++|+.++.....++++++++|+++.+|..... .........+.
T Consensus 202 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~ 275 (336)
T cd08276 202 ALGADHVINYRTTP-DWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLT 275 (336)
T ss_pred HcCCCEEEcCCccc-CHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhh
Confidence 789888887765 4 677788888776 899999999988899999999999999999875432 11344566778
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+++++.++.... .+.+.++++++.++.+.+.....+++++++++++.+.++...+|++++
T Consensus 276 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 276 KGATLRGIAVGS-----RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred cceEEEEEecCc-----HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 899999887655 467888999999998887766778999999999999988888899886
No 71
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.93 E-value=7e-24 Score=173.86 Aligned_cols=209 Identities=22% Similarity=0.242 Sum_probs=169.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++++++.++|||+++ ...++++|++|||+| +|++|.+++++|+..|+ +|+++++++++.+.++
T Consensus 151 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~ 226 (386)
T cd08283 151 PFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR 226 (386)
T ss_pred EEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 4688 9999988 8888999999999999 789999999999997 59999999999999998 6999999999999999
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch----------------------hHHHHHHHccccCcEEEEE
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA----------------------EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~----------------------~~~~~~~~~l~~~G~~v~~ 137 (228)
+++...++++...+++...+++.+++ ++|++||++|+ ..+..++++++++|+++.+
T Consensus 227 -~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 305 (386)
T cd08283 227 -SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSII 305 (386)
T ss_pred -HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEE
Confidence 77434566665541377778888776 89999999874 3678899999999999999
Q ss_pred eeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcC
Q 027106 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQG 215 (228)
Q Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~ 215 (228)
|..... ....+....+.+++++.+..... .+.++.+++++.++++.+. ....++++++.+|++.+.++
T Consensus 306 g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~ 375 (386)
T cd08283 306 GVYGGT-----VNKFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKK 375 (386)
T ss_pred cCCCCC-----cCccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhC
Confidence 865431 12334445677888888765433 4678899999999999874 44567999999999999887
Q ss_pred C-CcceEEEEe
Q 027106 216 G-NIGKKVVRI 225 (228)
Q Consensus 216 ~-~~gkvvl~~ 225 (228)
. ..+|++|++
T Consensus 376 ~~~~~k~~~~~ 386 (386)
T cd08283 376 EDGCIKVVLKP 386 (386)
T ss_pred CCCeEEEEecC
Confidence 7 567999863
No 72
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.93 E-value=9.4e-24 Score=170.29 Aligned_cols=207 Identities=23% Similarity=0.332 Sum_probs=168.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. ++++++..++|||+++ ...++++|++|||+| +|++|++++++|+. .|++|+++++++++.+.++
T Consensus 129 ~~~~-p~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~ 204 (338)
T PRK09422 129 AVKV-PEGLDPA-QASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK 204 (338)
T ss_pred eEeC-CCCCCHH-HeehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH
Confidence 5678 9999998 8899999999999998 778999999999999 59999999999998 4999999999999999998
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCcc-EEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGID-IYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d-~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|++.++++....++...+++..+ ++| +++++.++..+..++++++++|+++.+|.... ....+......
T Consensus 205 -~~g~~~v~~~~~~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~ 276 (338)
T PRK09422 205 -EVGADLTINSKRVEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVL 276 (338)
T ss_pred -HcCCcEEecccccccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhh
Confidence 9999888887541166667776665 688 55666666789999999999999999986532 11234455566
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~ 226 (228)
++..+.++.... ++.++.+++++++|.+.+.+. .++++++++||+.+.++...||+++.+.
T Consensus 277 ~~~~~~~~~~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 277 DGIEVVGSLVGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred cCcEEEEecCCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 777776655433 466888999999999876544 4699999999999999988899998764
No 73
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.93 E-value=8.6e-24 Score=170.23 Aligned_cols=205 Identities=25% Similarity=0.322 Sum_probs=166.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++.+.+||+++... +++++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++
T Consensus 129 ~~~l-p~~~~~~-~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~- 204 (334)
T PRK13771 129 LVKV-PPNVSDE-GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS- 204 (334)
T ss_pred eEEC-CCCCCHH-HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 5678 9998888 7889999999999999665 8999999999999999999999999999999999999999999987
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR 161 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (228)
++ ++++++.. ++.+.+++. +++|+++||+|+.....++++++++|+++.+|...... .........+.++
T Consensus 205 ~~-~~~~~~~~---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~ 274 (334)
T PRK13771 205 KY-ADYVIVGS---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSP----TYSLRLGYIILKD 274 (334)
T ss_pred HH-HHHhcCch---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCC----CcccCHHHHHhcc
Confidence 77 66655543 344455544 36999999999988899999999999999999754211 1012233345678
Q ss_pred ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+++.+..... ++.++.+++++.++.+++.+...++++++++||+.+.++...+|+++.+
T Consensus 275 ~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 275 IEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred cEEEEecCCC-----HHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 8887764333 5678899999999999877777789999999999999888889999865
No 74
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.93 E-value=2.9e-23 Score=165.97 Aligned_cols=214 Identities=28% Similarity=0.394 Sum_probs=177.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++++.+||+++....++.+|++|+|+|+++++|++++++++..|++|+++++++++.+.++
T Consensus 110 ~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 186 (325)
T cd08253 110 LVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR- 186 (325)
T ss_pred cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 8888888 788999999999999988799999999999999999999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++...+.+.+++ ++|+++||.++......+++++++|+++.+|.... ....+...++.+
T Consensus 187 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~ 259 (325)
T cd08253 187 QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAK 259 (325)
T ss_pred HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhc
Confidence 8999888877765 677777777665 89999999998888888999999999999987541 112333445667
Q ss_pred hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+.++.+...... +....+.+..+.+++.++.+.+.....+++++++++++.+..+...+|+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 260 EASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 777776654432 34456778888899999998877777789999999999999888889999864
No 75
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.92 E-value=1.3e-23 Score=169.79 Aligned_cols=205 Identities=20% Similarity=0.213 Sum_probs=167.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++++++.++|||+++. ..++.+|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 134 ~~~~-p~~l~~~-~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~ 209 (344)
T cd08284 134 LLKL-PDGLSDE-AALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA 209 (344)
T ss_pred eEEC-CCCCCHH-HhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 5678 9999888 88889999999999995 48899999999997 69999999999999997 8999988888888888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|+. .++.... ++...+.+.+++ ++|++||++++ ..+..++++++++|+++.+|..... .........+
T Consensus 210 -~~g~~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~ 281 (344)
T cd08284 210 -ALGAE-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAY 281 (344)
T ss_pred -HhCCe-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHh
Confidence 89975 4566554 677778777775 89999999986 6889999999999999999976522 1123445566
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.+++++.+.... .++.+.++++++.++++.+. +...++++++++|++.+.+++. +|+|++
T Consensus 282 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 282 NKNLTLRFGRCP-----VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred hcCcEEEEecCC-----cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 778887654222 25778899999999998863 4566799999999999988877 899985
No 76
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.92 E-value=1.8e-23 Score=168.58 Aligned_cols=206 Identities=23% Similarity=0.277 Sum_probs=168.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+ ..++++++++ ...++.+|++|||+| +|++|.+++|+|+.+|++|+++++++++.+.++
T Consensus 127 ~~~~-p~~~~~~-~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~- 200 (337)
T cd08261 127 ALLV-PEGLSLD-QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR- 200 (337)
T ss_pred eEEC-CCCCCHH-Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-
Confidence 3578 9999888 66655 6778899888 778999999999997 599999999999999999999988999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|+++++++.+. ++.+.+.+.+++ ++|+++|+.|+ ..+..++++++++|+++.+|.... ....+...+..
T Consensus 201 ~~g~~~v~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~ 273 (337)
T cd08261 201 ELGADDTINVGDE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHK 273 (337)
T ss_pred HhCCCEEecCccc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHh
Confidence 8999898888876 777888877766 89999999976 688999999999999999886532 11233445556
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCC-CcceEEEEe
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGG-NIGKKVVRI 225 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~ 225 (228)
+++++.+.... ..+.++.+++++.+|.+++ .+...++++++.+|++.+.+++ ..+|+|+++
T Consensus 274 ~~~~~~~~~~~-----~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 274 KELTILGSRNA-----TREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred CCCEEEEeccC-----ChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 77777665322 2567888999999999988 6667789999999999999884 778999875
No 77
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.92 E-value=2.1e-23 Score=165.32 Aligned_cols=212 Identities=22% Similarity=0.327 Sum_probs=170.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.++..+++||+++ +..++++|++|+|+++++++|.+++|+++.+|++|+++++++++.+.++
T Consensus 87 ~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 162 (303)
T cd08251 87 VVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK- 162 (303)
T ss_pred eEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence 4678 9998888 7888999999999999 5789999999999999999999999999999999999999999999997
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++.... ++...+...+++ ++|+++|++++......+++++++|+++.+|...... ....... .+.+
T Consensus 163 ~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~-~~~~ 236 (303)
T cd08251 163 QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDLS-VLSN 236 (303)
T ss_pred HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccChh-Hhhc
Confidence 8999888887765 777788887776 8999999998888899999999999999998653210 1112222 2333
Q ss_pred hceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 161 RIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 161 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+..+........ +....+.+.++.+++.+|.+++.....+++++++++++.+.++...+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 237 NQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 444433332211 333456788899999999998777777899999999999998888888874
No 78
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.92 E-value=2.1e-23 Score=168.76 Aligned_cols=207 Identities=20% Similarity=0.212 Sum_probs=169.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.+++.++|||.++....++++|++|||.|+ |++|.+++|+|+.+| .+|++++.++++.+.++
T Consensus 132 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~ 208 (345)
T cd08286 132 LYKL-PEGVDEE-AAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK 208 (345)
T ss_pred eEEC-CCCCCHH-HhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5678 8888887 788899999999998777889999999999875 999999999999999 69999888888888888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.++++.+. ++...+...+++ ++|++|||++. ..++.+++.++++|+++.+|.... ....+....+
T Consensus 209 -~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~ 280 (345)
T cd08286 209 -KLGATHTVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLW 280 (345)
T ss_pred -HhCCCceeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHh
Confidence 8999888888765 777777777766 89999999986 588899999999999999985431 1234555657
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCC--CcceEEEEe
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGG--NIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~--~~gkvvl~~ 225 (228)
.+++++.+.... .+.+..+.++++++.+.+. +..+++++++++|++.+.... ...|++|++
T Consensus 281 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 281 IKNITITTGLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hcCcEEEeecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 788888765332 2567888899999998764 456789999999999988763 345999864
No 79
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.92 E-value=3.3e-23 Score=166.91 Aligned_cols=210 Identities=26% Similarity=0.408 Sum_probs=176.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++.+.+|++++....++.+|++++|+|+++++|++++++++..|++|+++++++++.+.++
T Consensus 132 ~~~~-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~- 208 (342)
T cd08266 132 LLPI-PDNLSFE-EAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK- 208 (342)
T ss_pred ceeC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 5678 8888888 788888999999999888899999999999999889999999999999999999999999989887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
.++.+.+++..+. +....+...+.+ ++|++++++|...+...+++++++|+++.+|..... ....+....+.+
T Consensus 209 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~ 282 (342)
T cd08266 209 ELGADYVIDYRKE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWR 282 (342)
T ss_pred HcCCCeEEecCCh-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhc
Confidence 7888777776654 666667666655 899999999998889999999999999999876532 123344456778
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+..+.+..... ...+..++++++++.+.+.+...++++++++|++.+.++...+|+++++
T Consensus 283 ~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 283 QLSILGSTMGT-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ceEEEEEecCC-----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 88888877655 4678889999999999887777889999999999999888788999863
No 80
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.92 E-value=6.3e-23 Score=164.09 Aligned_cols=215 Identities=27% Similarity=0.380 Sum_probs=178.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++++++++.++|+++....++++|++|+|+|++|++|.+++++++..|++|+++++++++.+.++
T Consensus 105 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 181 (325)
T TIGR02824 105 VLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE- 181 (325)
T ss_pred cEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 8888887 788899999999999878899999999999999999999999999999999999999999988887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++...+....++ ++|++++++++..+...+++++++|+++.+|...... . ..+...++.+
T Consensus 182 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~-~~~~~~~~~~ 255 (325)
T TIGR02824 182 ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRK----A-ELDLGPLLAK 255 (325)
T ss_pred HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCc----C-CCChHHHHhc
Confidence 8998777776655 677777777665 8999999999888889999999999999998654211 1 3445555588
Q ss_pred hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++++.+...... +....+.+.++++++.++.+.+.....++++++.++++.+.++...+|+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 256 RLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred CCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 999998875442 22345667888899999998877777789999999999999888888998864
No 81
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.92 E-value=5.7e-23 Score=164.02 Aligned_cols=213 Identities=28% Similarity=0.418 Sum_probs=176.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.++.++.++|+++.+...+.++++|+|+|++|++|++++++++..|++|+++++++++.+.++
T Consensus 105 ~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~- 181 (323)
T cd05276 105 LLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR- 181 (323)
T ss_pred hccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence 4678 8888887 788999999999999988889999999999999999999999999999999999999999999987
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++...+.+...+ ++|+++|+.|+......+++++++|+++.+|...... ...+...++.+
T Consensus 182 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~ 255 (323)
T cd05276 182 ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRK 255 (323)
T ss_pred HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHh
Confidence 8998877777665 777777777665 8999999999988889999999999999998654321 12344455578
Q ss_pred hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
++++.++..... +......+.++.+++.++++.+.....++++++++|++.+.++...+|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 256 RLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred CCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 888888765432 223345678888999999998777777899999999999998887788874
No 82
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.92 E-value=1.2e-23 Score=170.27 Aligned_cols=208 Identities=24% Similarity=0.280 Sum_probs=168.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.++++++|||+++ ...++++|++|||.| .|++|.+++|+|+.+|. +|+++++++++.+.++
T Consensus 134 ~~~l-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~ 209 (347)
T cd05278 134 LAKI-PDGLPDE-DALMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK 209 (347)
T ss_pred EEEC-CCCCCHH-HHhhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 4678 9999888 8889999999999998 778999999999976 59999999999999997 8888888888888888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.++++.+. ++.+.++..+++ ++|++||+.++ ..+..++++|+++|+++.+|..... .........+
T Consensus 210 -~~g~~~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~ 282 (347)
T cd05278 210 -EAGATDIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWF 282 (347)
T ss_pred -HhCCcEEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhh
Confidence 8998888888776 777888877765 89999999987 6899999999999999999854321 0001122334
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC-cceEEEEe
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN-IGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~ 225 (228)
.+++.+.+..... .+.++++++++.++.+.+. ....++++++.+|++.+..++. .+|+++++
T Consensus 283 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 283 GKNLTFKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred hceeEEEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 5777777654332 4678899999999999864 4556799999999999988776 67998764
No 83
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.92 E-value=8.9e-24 Score=168.23 Aligned_cols=191 Identities=12% Similarity=0.120 Sum_probs=146.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. ++.+ .++.|||+++.. . ..++++|+|+| +|++|++++|+|+.+|++ |++++.++++++.+.
T Consensus 114 ~~~i-p~~~~~~--~a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~ 186 (308)
T TIGR01202 114 VCRL-DPALGPQ--GALL-ALAATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT 186 (308)
T ss_pred ceeC-CCCCCHH--HHhh-hHHHHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh
Confidence 5678 8888765 4444 567899999954 3 34689999998 599999999999999996 556677777766655
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
.+ .++|+.+ . .++++|++|||+|+. .++.++++++++|+++.+|.... ...++...++.
T Consensus 187 -~~---~~i~~~~--~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~ 246 (308)
T TIGR01202 187 -GY---EVLDPEK--D--------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFM 246 (308)
T ss_pred -hc---cccChhh--c--------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------Ccccccchhhh
Confidence 33 3344321 1 123799999999984 78999999999999999997532 12344556677
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
+++++.++.... ++.++++++++++|++.+. ++..+||+|+++||+.+.++...+|++|+
T Consensus 247 ~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 247 KEARLRIAAEWQ-----PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cceEEEEecccc-----hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 888888766544 4678999999999999864 67778999999999998877767899874
No 84
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.92 E-value=2.7e-23 Score=167.95 Aligned_cols=206 Identities=23% Similarity=0.259 Sum_probs=167.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+ +++.+||+++.. .++++|++|||+| +|++|.+++|+|+..|++ |++++.++++.+.++
T Consensus 133 ~~~l-P~~~~~~-~aa~~-~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~ 207 (343)
T cd08235 133 VLKL-PDNVSFE-EAALV-EPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK 207 (343)
T ss_pred EEEC-CCCCCHH-HHHhh-hHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 6788 9999888 55554 788999999954 5899999999997 599999999999999998 988988999999988
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|.++++++++. ++.+.+...+++ ++|+++||.++ ..+...+++++++|+++.+|...... ....+.....
T Consensus 208 -~~g~~~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~ 281 (343)
T cd08235 208 -KLGADYTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIH 281 (343)
T ss_pred -HhCCcEEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHh
Confidence 8999888888776 777778777766 89999999996 58899999999999999998644321 1233345566
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.+++.+.++.... .+.++.+++++.++.+.+ .+...++++++.+|++.+.+++ .+|+|++
T Consensus 282 ~~~~~l~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 282 YREITITGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred hCceEEEEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 6777776665444 466888899999999874 3456679999999999999999 8899874
No 85
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.92 E-value=1.8e-23 Score=168.57 Aligned_cols=201 Identities=22% Similarity=0.259 Sum_probs=167.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+.+.+.|||+++.. .++++|++|+|.| .|++|++++++|+.+|++|+++++++++.+.++
T Consensus 136 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~- 210 (337)
T cd05283 136 VFKI-PEGLDSA-AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL- 210 (337)
T ss_pred eEEC-CCCCCHH-HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-
Confidence 5678 9999988 788899999999999855 5699999999977 699999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++.... +... . ..+++|+++||++.. .+..++++++++|+++.+|..... ...+...++.+
T Consensus 211 ~~g~~~vi~~~~~-~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~ 279 (337)
T cd05283 211 KLGADEFIATKDP-EAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFG 279 (337)
T ss_pred HcCCcEEecCcch-hhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcC
Confidence 8999888876653 3322 1 234899999999986 589999999999999999875421 13445666778
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
++++.++.... .+.++.+++++.++++++.+ ..++++++++||+.+.+++..||+|++
T Consensus 280 ~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 280 RKSVAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ceEEEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 99999888765 46788899999999998754 567999999999999999988999874
No 86
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.92 E-value=1.1e-23 Score=169.91 Aligned_cols=207 Identities=24% Similarity=0.269 Sum_probs=166.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCC----------CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKP----------KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG 71 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~ 71 (228)
++++ |+++++. +++.+++.+.|||+++....++ ++|++|+|+|++|++|++++++|+.+|++|++++
T Consensus 110 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~- 186 (339)
T cd08249 110 TAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA- 186 (339)
T ss_pred eEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-
Confidence 4678 9898888 7888999999999998766554 7999999999999999999999999999999888
Q ss_pred CHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHcccc--CcEEEEEeeecccCCCcC
Q 027106 72 SKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNT--YGRVAVCGVISEYTDGKK 148 (228)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~ 148 (228)
++++.+.++ ++|++++++..+. ++.+.+++.+++++|+++|++|+ ..+..+++++++ +|+++.+|......
T Consensus 187 ~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~---- 260 (339)
T cd08249 187 SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET---- 260 (339)
T ss_pred CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc----
Confidence 568889897 8999888888765 77788877776689999999998 899999999999 99999998654211
Q ss_pred CCccchHHHHhhhceeeceeccc-------chhHHHHHHHHHHHHHHcCCCccccceecc--cCcHHHHHHHhHcCC-Cc
Q 027106 149 RAAPEMLDVIYKRIKFQGFLAAD-------HLNLYQDFISTTCNHLRSGAIYPLEDISDG--VESIPSAFTGLFQGG-NI 218 (228)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~~~~A~~~~~~~~-~~ 218 (228)
....+..+....... .+......++.+.+++.++++.+.+...++ ++++++|++.+.+++ ..
T Consensus 261 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 332 (339)
T cd08249 261 --------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSG 332 (339)
T ss_pred --------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccc
Confidence 001122222221111 122334678889999999999987666777 999999999999998 88
Q ss_pred ceEEEEe
Q 027106 219 GKKVVRI 225 (228)
Q Consensus 219 gkvvl~~ 225 (228)
+|+|+++
T Consensus 333 ~kvvv~~ 339 (339)
T cd08249 333 EKLVVRL 339 (339)
T ss_pred eEEEEeC
Confidence 9999874
No 87
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.92 E-value=2.2e-23 Score=168.96 Aligned_cols=203 Identities=19% Similarity=0.198 Sum_probs=163.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+ .+++|+|+++ ...++++|++|+|.| +|++|++++++|+.+|+ .++++++++++.+.++
T Consensus 142 ~~~l-P~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~ 216 (350)
T cd08256 142 VHKV-PDDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR 216 (350)
T ss_pred eEEC-CCCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH
Confidence 3688 9998887 66666 8999999998 778999999999955 69999999999999998 5677888888888888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH-
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV- 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~- 157 (228)
++|++.+++..+. ++...+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|..... .......+
T Consensus 217 -~~g~~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~ 288 (350)
T cd08256 217 -KFGADVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIG 288 (350)
T ss_pred -HcCCcEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhh
Confidence 8999888887765 777788887776 89999999995 6788899999999999999864321 12222222
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
..+++++.++.... ..+.++++++.+|.+++. +...++++++.+||+.+.+++..+|+++
T Consensus 289 ~~~~~~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 289 DRKELDVLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred cccccEEEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 24566676665443 467889999999999874 5667899999999999999888888874
No 88
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.92 E-value=4.5e-23 Score=167.95 Aligned_cols=210 Identities=20% Similarity=0.241 Sum_probs=167.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+.+++.+||+++...+++++|++|||+| +|++|++++++|+.+|++ |+++++++++.+.++
T Consensus 149 ~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~ 225 (365)
T cd05279 149 LAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK 225 (365)
T ss_pred eEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 5678 9999988 78888899999999988889999999999997 599999999999999995 777777999999998
Q ss_pred HHhCCCceeeccChh-hHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccc-cCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMN-TYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|++++++..+.. ++.+.+++.+++++|+++|++|. ..+..++++++ ++|+++.+|.... .....++...+
T Consensus 226 -~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~~~~~~~~~~ 300 (365)
T cd05279 226 -QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----GTEATLDPNDL 300 (365)
T ss_pred -HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----CCceeeCHHHH
Confidence 99998888765421 45666777665689999999985 78899999999 9999999986431 11224444555
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
.++.++.|++...+. ..+.+..++++++++.+.+. ...+++++++++||+.+.+++.. |+++
T Consensus 301 -~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 301 -LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred -hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 567777776554321 14678889999999998764 56677999999999998876654 6665
No 89
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.92 E-value=5e-23 Score=166.42 Aligned_cols=203 Identities=22% Similarity=0.285 Sum_probs=162.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.+ .++.+|++++ ..+++++|++|||+| .|++|++++|+|+.+|++ |+++++++++.+.++
T Consensus 130 ~~~l-P~~~~~~-~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~ 204 (343)
T cd05285 130 CHKL-PDNVSLE-EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK 204 (343)
T ss_pred cEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4678 9999888 56555 6888999997 789999999999987 599999999999999997 889988899999998
Q ss_pred HHhCCCceeeccChhhH---HHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106 81 DKLGFDDAFNYKEETDL---KAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML 155 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~---~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 155 (228)
++|++.+++.++. ++ .+.+.+.+.+ ++|++|||.|+. .++.++++++++|+++.+|..... ...+..
T Consensus 205 -~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~ 276 (343)
T cd05285 205 -ELGATHTVNVRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLS 276 (343)
T ss_pred -HcCCcEEeccccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHH
Confidence 8999988887764 43 6677777766 899999999985 889999999999999999854321 123334
Q ss_pred HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCC-CcceEEE
Q 027106 156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGG-NIGKKVV 223 (228)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl 223 (228)
....+++.+.++.... +.++.+++++.++.+. +.+..+++++++.+|++.+.+++ ..+|++|
T Consensus 277 ~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 277 AASLREIDIRGVFRYA------NTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HHhhCCcEEEEeccCh------HHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 5556677766654332 5678889999999875 34556779999999999998885 5689998
No 90
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.92 E-value=8e-23 Score=160.83 Aligned_cols=213 Identities=25% Similarity=0.401 Sum_probs=171.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++++.+++.++.+..++++|++|+|+|++|++|++++|+++..|++|+++++++++.+.++
T Consensus 74 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 150 (293)
T cd05195 74 VVKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR- 150 (293)
T ss_pred eEeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 8888887 788888999999999988889999999999998999999999999999999999999989989888
Q ss_pred HhC--CCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 82 KLG--FDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 82 ~~g--~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
+.| ++.+++.... ++.+.+++.+++ ++|+++|+.++..+..++++++++|+++.+|.....+ ...... ..+
T Consensus 151 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~-~~~ 224 (293)
T cd05195 151 ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS----NSKLGM-RPF 224 (293)
T ss_pred HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc----CCccch-hhh
Confidence 777 6677777665 777888887766 8999999999989999999999999999998754321 011111 223
Q ss_pred hhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 159 YKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
.+++.+.......+ +....+.+..+.+++.++++++.....++++++.++++.+..+...+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 225 LRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred ccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 34566555544332 233456788899999999998877778899999999999998887788764
No 91
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.92 E-value=7.3e-23 Score=160.87 Aligned_cols=213 Identities=23% Similarity=0.381 Sum_probs=170.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++.+.++|.++.....+.+|++|+|+|++|++|++++++++..|++|+++++++++.+.++
T Consensus 70 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 146 (288)
T smart00829 70 VVPI-PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR- 146 (288)
T ss_pred eEEC-CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence 4678 9999988 788889999999999978889999999999998999999999999999999999999999999998
Q ss_pred HhCC--CceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 82 KLGF--DDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 82 ~~g~--~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|. +.+++..+. ++.+.+....++ ++|+++|++++.....++++++++|+++.+|...... ....+... +
T Consensus 147 ~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~~-~ 220 (288)
T smart00829 147 ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMAP-F 220 (288)
T ss_pred HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchhh-h
Confidence 8998 677777665 677777777665 8999999999888889999999999999998653210 11122222 3
Q ss_pred hhhceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 159 YKRIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
.+++.+.+...... +....+.+..+.+++.++++.+.....+++++++++++.+..+...+|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 221 RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 45666655543321 222345678888999999988766667899999999999998877778764
No 92
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.92 E-value=7.3e-23 Score=164.52 Aligned_cols=204 Identities=27% Similarity=0.356 Sum_probs=165.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++++.+||+++.. .++.+++++||+|++|++|++++++++..|.+|+++++++++.+.++
T Consensus 129 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 204 (332)
T cd08259 129 LVKL-PDNVSDE-SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK- 204 (332)
T ss_pred eEEC-CCCCCHH-HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-
Confidence 5678 9999888 788999999999999966 89999999999999999999999999999999999998988888887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR 161 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (228)
++|.+.+++.. ++.+.+.+.. ++|++++++|......++++++++|+++.+|...... ..........++
T Consensus 205 ~~~~~~~~~~~---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~ 274 (332)
T cd08259 205 ELGADYVIDGS---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKE 274 (332)
T ss_pred HcCCcEEEecH---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCC
Confidence 88887766543 3444454433 6999999999988889999999999999998654321 111223333566
Q ss_pred ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
..+.+..... .+.++.+++++.+|.+++.+...++++++++||+.+.++...+|++++
T Consensus 275 ~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 275 IRIIGSISAT-----KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred cEEEEecCCC-----HHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 6666654322 567888999999999988777788999999999999998888899874
No 93
>PRK10083 putative oxidoreductase; Provisional
Probab=99.92 E-value=8.1e-23 Score=164.93 Aligned_cols=205 Identities=17% Similarity=0.149 Sum_probs=161.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL-FGCY-VVGSAGSKEKVTLL 79 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~g~~-V~~~~~~~~~~~~~ 79 (228)
++++ |++++.. . +++..++.+++.++ ...++++|++|+|+| .|++|++++|+|+. +|++ ++++++++++.+++
T Consensus 128 ~~~i-p~~~~~~-~-a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~ 202 (339)
T PRK10083 128 AHRI-PDAIADQ-Y-AVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALA 202 (339)
T ss_pred eEEC-cCCCCHH-H-HhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH
Confidence 5678 9998887 4 44677888888654 778999999999999 69999999999996 6994 77788889999999
Q ss_pred HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
+ ++|++.++++.+. ++...+.. .+ ++|++||++|+ ..+..++++++++|+++.+|.... ....+....
T Consensus 203 ~-~~Ga~~~i~~~~~-~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~ 272 (339)
T PRK10083 203 K-ESGADWVINNAQE-PLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGI 272 (339)
T ss_pred H-HhCCcEEecCccc-cHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHH
Confidence 8 9999888887764 66665543 23 57899999995 589999999999999999986532 112234444
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCC-CcceEEEEecC
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGG-NIGKKVVRITE 227 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~~~ 227 (228)
..+++++.+.... .+.++.+++++.+|++++. +..+++++++++|++.+.++. ..+|+++++.+
T Consensus 273 ~~~~~~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 273 TGKELSIFSSRLN------ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhcceEEEEEecC------hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 5567776665432 3678899999999999874 567789999999999998654 56899998854
No 94
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.91 E-value=7.9e-23 Score=166.45 Aligned_cols=210 Identities=21% Similarity=0.286 Sum_probs=170.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.+++.+++||.++....++.+|++|||+| .|++|.+++++|+.+|++ |+++++++++.+.++
T Consensus 148 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~ 224 (363)
T cd08279 148 VVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR 224 (363)
T ss_pred EEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence 5678 9999988 78888999999999998889999999999996 599999999999999995 999998999999887
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++++++.... ++...+...+++ ++|+++|++++ ..+..++++++++|+++.+|..... .....+...+.
T Consensus 225 -~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~ 298 (363)
T cd08279 225 -RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLPALELF 298 (363)
T ss_pred -HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccCHHHHh
Confidence 8999888887765 777778777755 89999999994 6889999999999999999864420 11234455555
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKV 222 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvv 222 (228)
.++..+.++..... ..++.++++++++.++++.+. +...++++++.+|++.+.+++..+.++
T Consensus 299 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 299 LSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred hcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 56777676654321 125778899999999999863 556789999999999999888665544
No 95
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.91 E-value=7.9e-23 Score=165.11 Aligned_cols=205 Identities=22% Similarity=0.211 Sum_probs=159.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. ++ +++.++++||+++ ..+++++|++|||+| +|++|.+++|+|+.+|++ +++++.++++.+.++
T Consensus 129 ~~~l-P~~~s~~-~a-~~~~~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~ 203 (341)
T cd08262 129 LLRV-PDGLSME-DA-ALTEPLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALAL 203 (341)
T ss_pred eEEC-CCCCCHH-Hh-hhhhhHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4578 9998887 44 4778899999996 789999999999997 599999999999999995 667777888988888
Q ss_pred HHhCCCceeeccChhhHHH---HHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106 81 DKLGFDDAFNYKEETDLKA---ALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML 155 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~---~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 155 (228)
++|++++++++.. +... .+.....+ ++|+++|++|+ ..+..++++++++|+++.+|..... . .....
T Consensus 204 -~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~-~~~~~ 275 (341)
T cd08262 204 -AMGADIVVDPAAD-SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES-----D-NIEPA 275 (341)
T ss_pred -HcCCcEEEcCCCc-CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC-----C-ccCHH
Confidence 8999888876643 2211 23444444 89999999987 4888899999999999999865321 1 11222
Q ss_pred HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
....++..+.+..... .+.++++++++.+|.+.+. +...++++++++|++.+.+++..+|+|++
T Consensus 276 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 276 LAIRKELTLQFSLGYT-----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHhhcceEEEEEeccc-----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 2245667766544333 3578889999999999864 35677999999999999999888999974
No 96
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.91 E-value=2e-22 Score=160.95 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=176.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+..++.+|++++.....+.+|++|+|+|++|++|++++++|+..|++|++++.++++.+.++
T Consensus 105 ~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 181 (323)
T cd08241 105 VFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR- 181 (323)
T ss_pred ceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-
Confidence 4678 8888887 677889999999999977889999999999999899999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++.+.+...+++ ++|.++|+.|+.....++++++++|+++.+|..... .........+.+
T Consensus 182 ~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~ 255 (323)
T cd08241 182 ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLK 255 (323)
T ss_pred HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhc
Confidence 8898777777665 777788887776 899999999998888999999999999999864321 111223345668
Q ss_pred hceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 161 RIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 161 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
++++.+.....+ +....+.+.++++++.++.+.+.....++++++.++++.+.++...+|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 256 NISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred CcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 888888765543 2234567888999999999887777778999999999999888877888863
No 97
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.91 E-value=9.9e-23 Score=166.54 Aligned_cols=212 Identities=21% Similarity=0.202 Sum_probs=166.2
Q ss_pred cccCCCCCCCcch--hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFPLSY--QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~~~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~ 78 (228)
++++ |+++++.. +++.++++++|||+++ ..+++++|++|+|.| .|++|++++|+|+..|+ +|+++++++++.++
T Consensus 140 ~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~ 216 (375)
T cd08282 140 LLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDL 216 (375)
T ss_pred EEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 5678 88888862 3677888999999999 788999999999977 59999999999999998 89999889999999
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh------------HHHHHHHccccCcEEEEEeeecccCCC
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE------------MQEAAIANMNTYGRVAVCGVISEYTDG 146 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~ 146 (228)
++ ++|+. .+++.+. ++.+.+.+.+++++|+++||+|+. .+..++++++++|+++.+|........
T Consensus 217 ~~-~~g~~-~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~ 293 (375)
T cd08282 217 AE-SIGAI-PIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPG 293 (375)
T ss_pred HH-HcCCe-EeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccc
Confidence 98 89984 4666654 677777777666899999999875 488999999999999988864322110
Q ss_pred c-------CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC
Q 027106 147 K-------KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN 217 (228)
Q Consensus 147 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~ 217 (228)
. ....++...++.++..+.+..... ++.++.+++++.++++.+. +...++++++++|++.+.++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~- 367 (375)
T cd08282 294 AGDAAAKQGELSFDFGLLWAKGLSFGTGQAPV-----KKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL- 367 (375)
T ss_pred cccccccCccccccHHHHHhcCcEEEEecCCc-----hhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-
Confidence 0 011234455556666655543322 4678889999999999874 667789999999999999888
Q ss_pred cceEEEEe
Q 027106 218 IGKKVVRI 225 (228)
Q Consensus 218 ~gkvvl~~ 225 (228)
.+|+|+++
T Consensus 368 ~~kvvv~~ 375 (375)
T cd08282 368 ETKVVIKP 375 (375)
T ss_pred ceEEEeCC
Confidence 88999863
No 98
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.91 E-value=1.1e-22 Score=164.43 Aligned_cols=211 Identities=25% Similarity=0.319 Sum_probs=167.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+ ..+++||+++. ..++++|++|||+| +|.+|.+++|+|+.+|++ |+++++++++.+.++
T Consensus 127 ~~~l-P~~~~~~-~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~ 201 (343)
T cd08236 127 LIKI-PDHVDYE-EAAMI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR 201 (343)
T ss_pred eEEC-cCCCCHH-HHHhc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 5678 9998887 66666 67889999995 78899999999997 599999999999999996 999998899989887
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.+++..+. . ...+....++ ++|+++||.|+ ..+..++++|+++|+++.+|...+. ...........+
T Consensus 202 -~~g~~~~~~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~ 275 (343)
T cd08236 202 -ELGADDTINPKEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKIL 275 (343)
T ss_pred -HcCCCEEecCccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHH
Confidence 8999888887765 5 6677777666 79999999976 5889999999999999999865421 111122344556
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHc-CCCcceEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQ-GGNIGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~-~~~~gkvvl 223 (228)
.+++++.++.........++.++++.+++.++++. +.+...++++++.++++.+.+ +...+|+|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 276 RKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 78888888776433223356788899999999986 345567799999999999998 556788874
No 99
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.91 E-value=3.8e-22 Score=159.75 Aligned_cols=215 Identities=29% Similarity=0.359 Sum_probs=177.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++++.++|.++.....+.++++|+|+|++|++|++++++++..|+++++++.++++.+.++
T Consensus 110 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~- 186 (328)
T cd08268 110 VVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL- 186 (328)
T ss_pred cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence 4678 8888887 788899999999999988889999999999999999999999999999999999999999989887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++...+...+.+ ++|+++++.++.....++++++++|+++.+|..... ....+....+.+
T Consensus 187 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~ 260 (328)
T cd08268 187 ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKK 260 (328)
T ss_pred HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhc
Confidence 8898877777665 677777776665 899999999998889999999999999999865421 112333445778
Q ss_pred hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++.+.+...... +......++.+.+++.++.+.+.....++++++.++++.+..+...+|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 261 SLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred CCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 888877665431 33445677888888889988877667789999999999998888888999864
No 100
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.91 E-value=2.5e-22 Score=161.00 Aligned_cols=212 Identities=20% Similarity=0.277 Sum_probs=167.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHH--hcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE--IGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 78 (228)
++++ |++++.. +++.++..+++++.++.. ..+.. +|++|+|+|++|++|.+++|+|+.+|++|++++.++++.+.
T Consensus 109 ~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~ 186 (324)
T cd08288 109 LVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADY 186 (324)
T ss_pred eeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 5678 9999888 888899999999877641 23445 67899999999999999999999999999999999999999
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++ ++|+++++++.+. . ..++..+++++|.++|++++......+..++.+|+++.+|...+. ....+...++
T Consensus 187 ~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~ 257 (324)
T cd08288 187 LR-SLGASEIIDRAEL-S--EPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFI 257 (324)
T ss_pred HH-hcCCCEEEEcchh-h--HhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhh
Confidence 97 9999888887643 2 245555555799999999987777888999999999999975321 1123344455
Q ss_pred hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++++.+...... .....+.+..+.+++.++.+.+. ...++++++++|++.+.+++..+|+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 258 LRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 78889888754332 22235678888889999988764 56779999999999999999889999864
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.91 E-value=1.7e-22 Score=162.84 Aligned_cols=210 Identities=20% Similarity=0.259 Sum_probs=168.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCC-----CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKK-----GEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEK 75 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~ 75 (228)
+.++ |++++.. +++.+++.+.+||+++.+.+++.+ |++|+|+|++|++|++++|+|+.+| ++|+++++++++
T Consensus 110 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~ 187 (336)
T cd08252 110 VGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPES 187 (336)
T ss_pred eeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhh
Confidence 4678 8888888 788889999999999888888887 9999999988999999999999999 899999999999
Q ss_pred HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106 76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM 154 (228)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 154 (228)
.+.++ ++|++++++... ++...++...++++|+++|++|+ ..+..++++++++|+++.+|... ...+.
T Consensus 188 ~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~ 256 (336)
T cd08252 188 IAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDL 256 (336)
T ss_pred HHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------Ccccc
Confidence 99998 899988887653 55556664443489999999985 68899999999999999998542 12333
Q ss_pred HHHHhhhceeeceecccc-------hhHHHHHHHHHHHHHHcCCCccccce---ecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 155 LDVIYKRIKFQGFLAADH-------LNLYQDFISTTCNHLRSGAIYPLEDI---SDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
..++.+++++.+...... +......++++++++.+|.+.+.... .++++++.+|++.+.++...+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 257 GPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred hhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 444467888877554321 11334678899999999999875332 35999999999999998888898874
No 102
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.91 E-value=2.1e-22 Score=160.56 Aligned_cols=208 Identities=17% Similarity=0.148 Sum_probs=164.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++ . .++.+..+++++++++. ..++++|++|+|+| +|++|.+++|+|+.+|++ |+++++++++.++++
T Consensus 98 ~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~ 171 (312)
T cd08269 98 AVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR 171 (312)
T ss_pred eEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4677 8876 3 23322378889999985 88999999999997 599999999999999998 999999998989888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.+++.... ++...+.+.+++ ++|+++||.|+ ..+..++++++++|+++.+|..... ....+.....
T Consensus 172 -~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~-----~~~~~~~~~~ 244 (312)
T cd08269 172 -ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDG-----PRPVPFQTWN 244 (312)
T ss_pred -HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-----CcccCHHHHh
Confidence 8999888876655 777888887776 99999999976 5889999999999999999865411 1233445666
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC-cceEEE
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN-IGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~-~gkvvl 223 (228)
.+++.+.++.... +....+.++.++++++++.+.+. +..+++++++++|++.+.+++. .+|+++
T Consensus 245 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 245 WKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 7777777665433 22335788999999999999873 4567899999999999998864 578876
No 103
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.91 E-value=2.4e-22 Score=164.68 Aligned_cols=208 Identities=20% Similarity=0.197 Sum_probs=160.8
Q ss_pred cccCCCCCCC-----cchhhhccchhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 027106 2 LRKFDPMGFP-----LSYQVGILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKE 74 (228)
Q Consensus 2 ~~~v~P~~~~-----~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~ 74 (228)
++++ |++++ ..+++++++.++++||+++... .++++|++|||+| .|++|++++|+|+.+|+ +|++++++++
T Consensus 162 ~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~ 239 (384)
T cd08265 162 AWEI-NELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEE 239 (384)
T ss_pred eEEC-CccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 3566 76532 2224777888999999999666 7899999999996 59999999999999999 7999998888
Q ss_pred HHHHHHHHhCCCceeeccCh--hhHHHHHHHHCCC-CccEEEcCcch--hHHHHHHHccccCcEEEEEeeecccCCCcCC
Q 027106 75 KVTLLKDKLGFDDAFNYKEE--TDLKAALKRYFPD-GIDIYFDNVGA--EMQEAAIANMNTYGRVAVCGVISEYTDGKKR 149 (228)
Q Consensus 75 ~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~-~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 149 (228)
+.+.++ ++|+++++++.+. .++...+++.+++ ++|+|+|+.|+ ..+..++++++++|+++.+|.... .
T Consensus 240 ~~~~~~-~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~ 312 (384)
T cd08265 240 RRNLAK-EMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------T 312 (384)
T ss_pred HHHHHH-HcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------C
Confidence 888888 8999888876531 1566778888876 89999999986 378899999999999999986432 1
Q ss_pred CccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 150 AAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
..........+..++.+...... ...++++++++.++.+.+. +...++++++.+|++.+.++ ..+|+|+
T Consensus 313 ~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 313 VPLHLEVLQVRRAQIVGAQGHSG----HGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred CcccHHHHhhCceEEEEeeccCC----cchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 12333455556667766653221 3568889999999999864 45667999999999996554 5678875
No 104
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.91 E-value=3.4e-22 Score=163.17 Aligned_cols=213 Identities=20% Similarity=0.261 Sum_probs=162.8
Q ss_pred CcccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Q 027106 1 MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLL 79 (228)
Q Consensus 1 ~~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~ 79 (228)
+++++ |+++++. +++.+.+++.|||+++...+++++|++|+|+| +|++|++++++|+..|+ +|+++++++++++.+
T Consensus 155 ~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a 231 (373)
T cd08299 155 AVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA 231 (373)
T ss_pred ceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 36788 9999998 88888999999999987889999999999997 59999999999999999 899999999999999
Q ss_pred HHHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHcc-ccCcEEEEEeeecccCCCcCCCccchHH
Q 027106 80 KDKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANM-NTYGRVAVCGVISEYTDGKKRAAPEMLD 156 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 156 (228)
+ ++|++++++..+. ++....+.+.+++++|+++||+|+ ..+..++..+ +++|+++.+|..... ........
T Consensus 232 ~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~- 305 (373)
T cd08299 232 K-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM- 305 (373)
T ss_pred H-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-
Confidence 8 8999888876643 136666666665689999999996 5677766655 579999999975321 01122222
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+.++.++.++....+. .++.+.++++.+.++.+++ .+..+++++++.+|++.+.+++. .|+++++
T Consensus 306 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 306 LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 23467788887765431 1245556667777765543 45667899999999999887764 4888763
No 105
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.90 E-value=7.4e-22 Score=158.05 Aligned_cols=209 Identities=25% Similarity=0.399 Sum_probs=170.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. .++.++..+.+||+++.+..++++|++++|+|+++++|++++++++..|++|++++++ ++.+.++
T Consensus 110 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~- 185 (326)
T cd08272 110 LALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR- 185 (326)
T ss_pred cccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-
Confidence 4678 8888888 7888899999999998888999999999999999999999999999999999999987 8888887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++... .+...+...+++ ++|+++|+.++......+++++++|+++.+|.... ........+
T Consensus 186 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~ 254 (326)
T cd08272 186 SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFR 254 (326)
T ss_pred HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhh
Confidence 899877776654 366677777776 89999999998888889999999999999986421 111222357
Q ss_pred hceeeceeccc--c----hhHHHHHHHHHHHHHHcCCCccccc-eecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAAD--H----LNLYQDFISTTCNHLRSGAIYPLED-ISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++.+.+..... . +....+.+..+++++.++.+.+.+. ..++++++.++++.+.++...+|+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 255 NATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 77777665432 1 3334578889999999999887654 7789999999999998888788999864
No 106
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.90 E-value=3.5e-22 Score=160.30 Aligned_cols=196 Identities=21% Similarity=0.280 Sum_probs=156.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++.+.+||+++.. .++++|++|+|+|++|++|++++++|+.+|++|+++++ .+.++
T Consensus 129 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~- 200 (325)
T cd08264 129 LFKI-PDSISDE-LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK- 200 (325)
T ss_pred ceeC-CCCCCHH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-
Confidence 5788 9999988 888899999999999954 89999999999999999999999999999999988873 26666
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR 161 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (228)
++|++++++.. +....+++.+ +++|+++|++|+..+..++++++++|+++.+|..... ....+...+..++
T Consensus 201 ~~g~~~~~~~~---~~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~ 271 (325)
T cd08264 201 EFGADEVVDYD---EVEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQ 271 (325)
T ss_pred HhCCCeeecch---HHHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcC
Confidence 89988877654 2344556555 6799999999998999999999999999999864211 1244556666677
Q ss_pred ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceE
Q 027106 162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKK 221 (228)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkv 221 (228)
.++.+..... ++.++.+++++...+ ..+...++++++++|++.+.++...+|+
T Consensus 272 ~~~~~~~~~~-----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 272 ISIIGSTGGT-----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred cEEEEccCCC-----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 7777766554 467778888886444 4455678999999999999888776675
No 107
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.90 E-value=7.4e-22 Score=159.41 Aligned_cols=206 Identities=21% Similarity=0.309 Sum_probs=161.5
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. .++++.++.+|++++ ...+++|++|+|.| +|++|.+++|+|+.+|++ |+++++++++.+.++
T Consensus 130 ~~~l-p~~~~~~--~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~ 203 (340)
T TIGR00692 130 IWKN-PKSIPPE--YATIQEPLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK 203 (340)
T ss_pred cEEC-cCCCChH--hhhhcchHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4678 8888875 556788889999887 35678999999977 599999999999999996 888888888888888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.+++.... ++.+.+.+..++ ++|+++||.|+ ..+...+++++++|+++.+|..... . ... ....++
T Consensus 204 -~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~---~~~-~~~~~~ 276 (340)
T TIGR00692 204 -KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-V---TID-FTNKVI 276 (340)
T ss_pred -HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-c---ccc-hhhhhh
Confidence 8999888887765 777888777765 89999999885 6888999999999999999865321 1 111 122455
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.+++.+.++.... ..+.+.++++++.++.++ +.+...++++++.++++.+.+++. ||+|+++
T Consensus 277 ~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 277 FKGLTIYGITGRH----MFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred hcceEEEEEecCC----chhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 5677766654222 135678899999999987 345667799999999999988775 9999875
No 108
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.90 E-value=9.6e-22 Score=159.03 Aligned_cols=207 Identities=20% Similarity=0.250 Sum_probs=164.8
Q ss_pred cccCCCCCCCcch-h---hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHH
Q 027106 2 LRKFDPMGFPLSY-Q---VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKV 76 (228)
Q Consensus 2 ~~~v~P~~~~~~~-~---aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~ 76 (228)
++++ |+++++.. . .+++.+.+.+|++++ ...++++|++|+|.| +|++|++++|+|+..|++ ++++++++++.
T Consensus 130 ~~~l-P~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~ 206 (345)
T cd08287 130 LVKV-PGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQ 206 (345)
T ss_pred eEEC-CCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 5678 88887721 1 123446789999998 578999999999977 699999999999999995 78888888888
Q ss_pred HHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106 77 TLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM 154 (228)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 154 (228)
+.++ ++|++.++++... ++.+.+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|.... ....+.
T Consensus 207 ~~~~-~~ga~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~ 278 (345)
T cd08287 207 ALAR-EFGATDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDV 278 (345)
T ss_pred HHHH-HcCCceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCH
Confidence 8888 8999888888765 777788887776 89999999986 688999999999999999886542 123344
Q ss_pred HHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 155 LDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
...+.+++++.+..... .+.++++++++.++++++. +...++++++++|++.+.++... |++|++
T Consensus 279 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~ 345 (345)
T cd08287 279 RELFFRNVGLAGGPAPV-----RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP 345 (345)
T ss_pred HHHHhcceEEEEecCCc-----HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence 45677888887754333 4688999999999999874 45667999999999998876654 999863
No 109
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.90 E-value=5.4e-22 Score=160.94 Aligned_cols=219 Identities=23% Similarity=0.247 Sum_probs=158.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFG-C-YVVGSAGSKEKVTL 78 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~-~V~~~~~~~~~~~~ 78 (228)
++++ |+++++. +++.++..+.|||+++.... ++++|++|+|+|+++++|.+++|+|+..| . .|+++. ++++.+.
T Consensus 116 ~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~ 192 (352)
T cd08247 116 ITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAEL 192 (352)
T ss_pred eEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHH
Confidence 4688 9999998 88889999999999997767 89999999999998999999999999874 4 677776 4555667
Q ss_pred HHHHhCCCceeeccChhh---HHHH-HHHHCCC-CccEEEcCcch-hHHHHHHHccc---cCcEEEEEeeecccCCCcCC
Q 027106 79 LKDKLGFDDAFNYKEETD---LKAA-LKRYFPD-GIDIYFDNVGA-EMQEAAIANMN---TYGRVAVCGVISEYTDGKKR 149 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~---~~~~-~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~ 149 (228)
++ ++|++.+++..+. + +... ++..+++ ++|++|||.|+ .....++++++ ++|+++.++.....++....
T Consensus 193 ~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~ 270 (352)
T cd08247 193 NK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDT 270 (352)
T ss_pred HH-HhCCCEEEecCCC-cccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchh
Confidence 76 8999888887654 4 4344 3444424 89999999998 68889999999 99999987533211100000
Q ss_pred -----CccchHHHHhhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 150 -----AAPEMLDVIYKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 150 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
........+.++..+..+..... .....+.++.+++++.++.+++.+...++++++++|++.+.+++..||+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 350 (352)
T cd08247 271 FNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVI 350 (352)
T ss_pred hhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEE
Confidence 00001111223333333222111 000136788899999999998777778899999999999999888899998
Q ss_pred Ee
Q 027106 224 RI 225 (228)
Q Consensus 224 ~~ 225 (228)
++
T Consensus 351 ~~ 352 (352)
T cd08247 351 KV 352 (352)
T ss_pred eC
Confidence 63
No 110
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.90 E-value=9.3e-22 Score=158.90 Aligned_cols=206 Identities=22% Similarity=0.301 Sum_probs=160.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++ +...+.++++++.. ...+|++|+|+| .|++|.+++|+|+.+|+ +|++++.++++.++++
T Consensus 132 ~~~i-P~~l~~~-~~~-~~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~ 205 (341)
T PRK05396 132 VWKI-PDDIPDD-LAA-IFDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR 205 (341)
T ss_pred eEEC-cCCCCHH-HhH-hhhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 4678 9888887 444 45666777766532 346899999987 59999999999999999 6888888888988888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|++.++++++. ++.+.+++.+.+ ++|++|||.|+ ..++.++++++++|+++.+|..... ...+...+.
T Consensus 206 -~lg~~~~~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~ 277 (341)
T PRK05396 206 -KMGATRAVNVAKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVI 277 (341)
T ss_pred -HhCCcEEecCccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHh
Confidence 8999888888765 778888877765 89999999886 6889999999999999999865421 122346667
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcC-CCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSG-AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~ 226 (228)
.++.++.++..... .+.+..+++++.++ ++.+.+...++++++.+||+.+.++. .||++++|+
T Consensus 278 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 278 FKGLTIKGIYGREM----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred hcceEEEEEEccCc----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 77788777653221 24456788888888 45555667779999999999998877 799999874
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.90 E-value=2e-21 Score=155.55 Aligned_cols=210 Identities=23% Similarity=0.311 Sum_probs=167.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+.+++.+|++++...+++++|++|+|+|+++++|++++++++..|++|+++. ++++.+.+.
T Consensus 107 ~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~- 182 (325)
T cd08271 107 VLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182 (325)
T ss_pred eEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-
Confidence 4678 8898888 78889999999999998889999999999999988999999999999999999887 667778887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++...+.....+ ++|++++++++......+++++++|+++.++..... . ....+.+
T Consensus 183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-------~--~~~~~~~ 252 (325)
T cd08271 183 SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA-------S--PDPPFTR 252 (325)
T ss_pred HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC-------c--chhHHhh
Confidence 8998888877665 677777777766 899999999987777899999999999998754311 0 1122334
Q ss_pred hceeeceecccc----h----hHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADH----L----NLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
++.+....+... + ...++.+.++++++.++.+.+.....++++++.+|++.+.++...+|+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 253 ALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 444443332211 1 2345677889999999999876667779999999999999888888998864
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.89 E-value=1.1e-21 Score=157.61 Aligned_cols=212 Identities=26% Similarity=0.340 Sum_probs=160.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++++.+||+++....++.+|++|+|+|++|++|++++++|+..|++|++++. +++.+.++
T Consensus 105 ~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~- 180 (331)
T cd08273 105 LVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR- 180 (331)
T ss_pred eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-
Confidence 4578 9998888 788899999999999988789999999999999999999999999999999999997 88888887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-------
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM------- 154 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------- 154 (228)
++|+.. ++.... ++... ...++++|+++|++++.....++++++++|+++.+|....... .....++
T Consensus 181 ~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~ 254 (331)
T cd08273 181 ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQ--GRRSLAALGSLLAR 254 (331)
T ss_pred HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCC--ccccccchhhhhhh
Confidence 898654 444433 44333 2333589999999999889999999999999999987543211 0000100
Q ss_pred -----HHHHhhhceeeceeccc--chhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 155 -----LDVIYKRIKFQGFLAAD--HLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 155 -----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
.....++.++.+..... .+....+.+..+++++.+|.+++.+...++++++++|++.+.++...||+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 255 LAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred hhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 01112223332222211 1334467899999999999998877777899999999999998888889886
No 113
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.89 E-value=1.8e-21 Score=156.78 Aligned_cols=203 Identities=27% Similarity=0.338 Sum_probs=159.7
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+ +.+.++++++ ...++++|++|||+| .|++|.+++++|+..|++ |+++++++++.+.++
T Consensus 127 ~~~l-P~~~~~~-~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~ 201 (334)
T cd08234 127 VYKI-PDNLSFE-EAALA-EPLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK 201 (334)
T ss_pred cEEC-cCCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4678 9998888 55544 7888999998 778999999999997 599999999999999996 888998999999997
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|.+.+++..+. +.... +...++++|+++||.+. .....++++++++|+++.+|..... ..........+.
T Consensus 202 -~~g~~~~~~~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~ 274 (334)
T cd08234 202 -KLGATETVDPSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQ 274 (334)
T ss_pred -HhCCeEEecCCCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHh
Confidence 8998877777654 44444 33333489999999975 6888999999999999999865421 112233444455
Q ss_pred hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+++++.+.... .+.++.++++++++++.+. +...++++++++|++.+.+ ...+|+|+
T Consensus 275 ~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 275 KELTIIGSFIN------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred CCcEEEEeccC------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 77777776543 3568889999999998753 4567799999999999998 67789886
No 114
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.89 E-value=1.3e-21 Score=158.03 Aligned_cols=205 Identities=22% Similarity=0.273 Sum_probs=159.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++++.++.++++++. ...++|++|||+| .|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 132 ~~~l-P~~~~~~--~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~ 205 (341)
T cd05281 132 LWKN-DKDIPPE--IASIQEPLGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK 205 (341)
T ss_pred cEEC-cCCCCHH--HhhhhhHHHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4678 8887765 5677788889998874 4568999999987 59999999999999999 7998888888888888
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++|.+++++.... ++. .+++..++ ++|++|||.|+ .....++++|+++|+++.+|.... . .. ........
T Consensus 206 -~~g~~~~~~~~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~--~~--~~~~~~~~ 277 (341)
T cd05281 206 -KMGADVVINPREE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-P--VD--IDLNNLVI 277 (341)
T ss_pred -HhCcceeeCcccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-C--cc--cccchhhh
Confidence 8999888877654 676 77777776 99999999976 578899999999999999986542 1 10 11122355
Q ss_pred hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
.++..+.++..... .+.++.+.+++.++.+.+ .+...++++++++||+.+.++. .||+|+++
T Consensus 278 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 278 FKGLTVQGITGRKM----FETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred ccceEEEEEecCCc----chhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 56777766553221 355778899999999864 3455679999999999999988 89999864
No 115
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.89 E-value=2e-21 Score=156.87 Aligned_cols=201 Identities=19% Similarity=0.269 Sum_probs=157.6
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++ ++.+++++|+++.....+ +|++|||.| +|++|.+++|+|+.+|. +|+++++++++.++++
T Consensus 133 ~~~i-P~~~~~~-~aa-~~~~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~ 207 (339)
T cd08232 133 CVPL-PDGLSLR-RAA-LAEPLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR 207 (339)
T ss_pred eEEC-cCCCCHH-Hhh-hcchHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 4678 9998887 454 467888999999766666 999999987 59999999999999999 8999998888888887
Q ss_pred HHhCCCceeeccChhhHHHHHHHHC-C-CCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYF-P-DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
++|.+++++.++. ++ .+.. . +++|+++|+.++ ..++.++++|+++|+++.+|.... ....+....
T Consensus 208 -~~g~~~vi~~~~~-~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~ 275 (339)
T cd08232 208 -AMGADETVNLARD-PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNAL 275 (339)
T ss_pred -HcCCCEEEcCCch-hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHH
Confidence 8998888877654 32 2222 2 369999999985 688999999999999999985431 112233444
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+.+++.+.++... .+.++.+++++.++.+++. +..+++++++++|++.+.++...||+|+++
T Consensus 276 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 276 VAKELDLRGSFRF------DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred hhcceEEEEEecC------HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 5677777766532 3567889999999998643 566789999999999999888889999874
No 116
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.89 E-value=9.3e-22 Score=159.36 Aligned_cols=216 Identities=24% Similarity=0.378 Sum_probs=157.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCC----CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKK----GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT 77 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~ 77 (228)
++++ |++++.. +++.+++.+.|||+++.+.+.+.+ |++|+|+|++|++|++++++|+.+|++|++++++ ++.+
T Consensus 124 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~ 200 (350)
T cd08248 124 VSKK-PKNLSHE-EAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIP 200 (350)
T ss_pred eecC-CCCCCHH-HHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHH
Confidence 4678 9999888 788899999999999977777754 9999999999999999999999999999988855 5667
Q ss_pred HHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-CC--Cccc-
Q 027106 78 LLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-KR--AAPE- 153 (228)
Q Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~~- 153 (228)
.++ ++|.+.+++..+. ++...+.. .+++|+++|+.|+.....++++++++|+++.+|.....+... .. ....
T Consensus 201 ~~~-~~g~~~~~~~~~~-~~~~~l~~--~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 276 (350)
T cd08248 201 LVK-SLGADDVIDYNNE-DFEEELTE--RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKS 276 (350)
T ss_pred HHH-HhCCceEEECCCh-hHHHHHHh--cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhh
Confidence 777 8999888877654 55555443 237999999999989999999999999999998643211000 00 0000
Q ss_pred hHHHHhhhcee--eceec-ccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106 154 MLDVIYKRIKF--QGFLA-ADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 154 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
...+....... ..... ........+.+.++++++.+|.+.+.+...++++++.+|++.+.++...+|++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 277 AVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 00111111110 00000 0001112567899999999999987777788999999999999988877888863
No 117
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.89 E-value=1.2e-21 Score=156.90 Aligned_cols=194 Identities=24% Similarity=0.243 Sum_probs=152.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+ .+..+++.++ +..++++|++|||+| +|++|.+++|+|+.+|++|++++.++++.+.++
T Consensus 123 ~~~l-P~~~~~~-~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~- 196 (319)
T cd08242 123 LHVV-PDLVPDE-QAVFA-EPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR- 196 (319)
T ss_pred eEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-
Confidence 5678 9888877 44433 5556666665 778999999999997 699999999999999999999999999999999
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.++++... ..++++|+++||.|+ ..+..++++++++|+++..+.... ....+...+..+
T Consensus 197 ~~g~~~~~~~~~~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~ 261 (319)
T cd08242 197 RLGVETVLPDEAE---------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVN 261 (319)
T ss_pred HcCCcEEeCcccc---------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheec
Confidence 7999876665421 122389999999987 588899999999999998665332 123445566677
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCC--ccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAI--YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i--~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
+.++.+..... ++.+++++.++++ .+.+...++++++.+||+.+.++. .+|+||++
T Consensus 262 ~~~i~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 262 EITLVGSRCGP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred ceEEEEEeccc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 88877765433 6678899999999 445667889999999999998666 47999864
No 118
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.89 E-value=7.9e-21 Score=152.88 Aligned_cols=219 Identities=28% Similarity=0.416 Sum_probs=169.8
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~ 80 (228)
++++ |++++.. +++.++++++++|+++....++++|++|+|+|++|++|++++++|+.. +..++... .+++.+.++
T Consensus 104 ~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~ 180 (337)
T cd08275 104 VFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK 180 (337)
T ss_pred eEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH
Confidence 4678 8888887 788888999999999988899999999999999999999999999998 33333332 455778887
Q ss_pred HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-----------CC
Q 027106 81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-----------KR 149 (228)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~ 149 (228)
++|.+.+++.... ++...++..+++++|+++||.|+......+++++++|+++.+|.....+... ..
T Consensus 181 -~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 258 (337)
T cd08275 181 -ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNR 258 (337)
T ss_pred -HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccc
Confidence 8998887777665 7777777776558999999999988899999999999999998654221000 00
Q ss_pred CccchHHHHhhhceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106 150 AAPEMLDVIYKRIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225 (228)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~ 225 (228)
........+.+++++.++..... .......+.++++++.++.+.+.....+++++++++++.+.++...+|+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 259 PKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred cccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 11222455678888888765422 11223567889999999998887777789999999999999888888999864
No 119
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.89 E-value=6.1e-21 Score=155.46 Aligned_cols=204 Identities=22% Similarity=0.284 Sum_probs=157.3
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++ +..++.++++++ ...++.+|++|+|+| .|++|.+++|+|+.+|++ |++++.++++.+.++
T Consensus 149 ~~~~-P~~l~~~-~aa-~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~ 223 (364)
T PLN02702 149 CFKL-PENVSLE-EGA-MCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK 223 (364)
T ss_pred eEEC-CCCCCHH-HHh-hhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4678 9998887 443 334566688888 778999999999997 599999999999999994 777888888888888
Q ss_pred HHhCCCceeecc--ChhhHHHHHHHH---CCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106 81 DKLGFDDAFNYK--EETDLKAALKRY---FPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM 154 (228)
Q Consensus 81 ~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 154 (228)
++|++.++++. +. ++.+.+... +++++|++||+.|+ ..+..++++++++|+++.+|...+ ......
T Consensus 224 -~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~ 295 (364)
T PLN02702 224 -QLGADEIVLVSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPL 295 (364)
T ss_pred -HhCCCEEEecCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccH
Confidence 89998776543 23 555555544 23489999999994 789999999999999999986432 112345
Q ss_pred HHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceeccc--CcHHHHHHHhHcCCCcceEEEE
Q 027106 155 LDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGV--ESIPSAFTGLFQGGNIGKKVVR 224 (228)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~--~~~~~A~~~~~~~~~~gkvvl~ 224 (228)
.....+++++.+++... ..++.++++++++++. +.+...|++ +++++|++.+.+++..+|+++.
T Consensus 296 ~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 296 TPAAAREVDVVGVFRYR------NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHhCccEEEEeccCh------HHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 56677888888766432 4678889999999986 334556444 7999999999988878899985
No 120
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.89 E-value=3.6e-21 Score=154.78 Aligned_cols=201 Identities=26% Similarity=0.371 Sum_probs=161.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
+.++ |++++.. +++.+++.+++||+++.. .++++|++|||+| .|++|++++++|+..|.+|+++++++++.+.++
T Consensus 129 ~~~~-p~~~~~~-~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~- 203 (330)
T cd08245 129 TVLL-PDGLPLA-QAAPLLCAGITVYSALRD-AGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELAR- 203 (330)
T ss_pred eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence 4678 9998888 788899999999999954 8899999999997 488999999999999999999999999999997
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++.... +.... ..+++|+++|+.+. .....++++++++|+++.+|..... ........++.+
T Consensus 204 ~~g~~~~~~~~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~ 273 (330)
T cd08245 204 KLGADEVVDSGAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMK 273 (330)
T ss_pred HhCCcEEeccCCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhC
Confidence 8998877766543 32222 22479999999774 6888999999999999999864321 112224456677
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+.++.++.... ...++.+++++.++.+.+ ....++++++.+||+.+.++...+|+|+
T Consensus 274 ~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 274 RQSIAGSTHGG-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred CCEEEEeccCC-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 77877776654 467888899999999886 4456799999999999998888888874
No 121
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.88 E-value=3.9e-21 Score=154.46 Aligned_cols=195 Identities=19% Similarity=0.180 Sum_probs=155.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. ++++++++++|||+++ +.+++++|++|||+| +|++|++++++++..|.+|+++++++++.+.++
T Consensus 134 ~~~l-p~~~~~~-~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~- 208 (329)
T cd08298 134 AYPI-PEDYDDE-EAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR- 208 (329)
T ss_pred EEEC-CCCCCHH-HhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-
Confidence 5678 9999888 8889999999999999 889999999999997 699999999999999999999999999999997
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|++.+++.... .++++|+++++.+. ..+..++++++++|+++.+|.... .....+... +.+
T Consensus 209 ~~g~~~~~~~~~~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~ 272 (329)
T cd08298 209 ELGADWAGDSDDL----------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWG 272 (329)
T ss_pred HhCCcEEeccCcc----------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhC
Confidence 8998776665431 22379999998654 689999999999999999874321 111122222 345
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+..+.+..... .+.++.++++++++.+++. ...++++++++|++.+.+++..||+|+
T Consensus 273 ~~~i~~~~~~~-----~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 273 EKTIRSVANLT-----RQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred ceEEEEecCCC-----HHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 55555544333 4668889999999998874 466799999999999999888889874
No 122
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.87 E-value=9e-21 Score=150.59 Aligned_cols=199 Identities=25% Similarity=0.382 Sum_probs=159.9
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. .++.+++.+.++++++....++.+|++|+|+|++|++|++++++++..|++|++++.++ +.+.++
T Consensus 110 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~- 185 (309)
T cd05289 110 LALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR- 185 (309)
T ss_pred hccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-
Confidence 4577 8888887 78888899999999997777899999999999889999999999999999999988777 778887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (228)
++|.+.+++.... ++.. ...+ ++|++++++++.....++++++++|+++.+|..... .. ..+.+
T Consensus 186 ~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-------~~---~~~~~ 250 (309)
T cd05289 186 SLGADEVIDYTKG-DFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPA-------EQ---AAKRR 250 (309)
T ss_pred HcCCCEEEeCCCC-chhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcc-------hh---hhhhc
Confidence 8998777776654 4333 2333 899999999999899999999999999999864321 00 33445
Q ss_pred hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+..+........ ...+.+++++++++.+.+.+...++++++++|++.+..+...+|+++
T Consensus 251 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 251 GVRAGFVFVEPD----GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cceEEEEEeccc----HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 566555544321 56788999999999988777777899999999999998887778774
No 123
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.87 E-value=6.8e-21 Score=152.16 Aligned_cols=206 Identities=28% Similarity=0.366 Sum_probs=153.0
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |++++.. +++.+++++.+||+++....++++|++|+|+|++|++|++++++|+..|++|++++++ ++.+.++
T Consensus 109 ~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~- 184 (319)
T cd08267 109 LAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR- 184 (319)
T ss_pred eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-
Confidence 4678 9998887 7889999999999999887889999999999998999999999999999999998865 7778887
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh--HHHHHHHccccCcEEEEEeeecccCCCcCCCccc--hHH
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPE--MLD 156 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~ 156 (228)
++|.+++++.... ++. ...+.+ ++|++++|+++. .....+..++++|+++.+|...... ..... ...
T Consensus 185 ~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~ 256 (319)
T cd08267 185 SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLT 256 (319)
T ss_pred HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchh
Confidence 8998777776554 433 333444 899999999853 3334444599999999998754321 00100 001
Q ss_pred HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
.......+...... +. .+.+..+++++.++++.+.+...++++++++|++.+.++...+|+++
T Consensus 257 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 257 LGGGGRRLKFFLAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred hccccceEEEEEec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 11111222221111 11 57788999999999998877777899999999999998877778774
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.87 E-value=1e-20 Score=148.48 Aligned_cols=202 Identities=24% Similarity=0.270 Sum_probs=153.4
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK 80 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~ 80 (228)
++++ |+++++. +++.+ +.++|||+++ ...++++|+++||+| .|++|++++++|+.+|++ |+++++++++.+.++
T Consensus 65 ~~~i-p~~l~~~-~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~ 139 (277)
T cd08255 65 LVPL-PDGLPPE-RAALT-ALAATALNGV-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE 139 (277)
T ss_pred eeEC-cCCCCHH-HhHHH-HHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH
Confidence 4678 9888887 66666 7899999998 578999999999997 599999999999999998 999999999999888
Q ss_pred HHhC-CCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106 81 DKLG-FDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI 158 (228)
Q Consensus 81 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 158 (228)
++| .+.+++... . ...++++|++||+++. ......+++++++|+++.+|..... .......+.
T Consensus 140 -~~g~~~~~~~~~~--~------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~ 204 (277)
T cd08255 140 -ALGPADPVAADTA--D------EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFH 204 (277)
T ss_pred -HcCCCccccccch--h------hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHH
Confidence 888 444443321 1 1122389999999875 6888999999999999999875431 011123344
Q ss_pred hhhceeeceecccc----h---hHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcC-CCcceEEE
Q 027106 159 YKRIKFQGFLAADH----L---NLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQG-GNIGKKVV 223 (228)
Q Consensus 159 ~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvl 223 (228)
.++.++.+...... . ....+.++++++++.++.+++.+...++++++.+||+.+.++ ....|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 205 FKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred hccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 45667766654432 0 112367889999999999888777778999999999999877 34567764
No 125
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.86 E-value=1.7e-20 Score=130.92 Aligned_cols=128 Identities=26% Similarity=0.458 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcc-hhHHHHHHHc
Q 027106 50 SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVG-AEMQEAAIAN 127 (228)
Q Consensus 50 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g-~~~~~~~~~~ 127 (228)
++|++++|+|+..|++|+++++++++.++++ ++|+++++++++. ++.+++++.+++ ++|+||||+| .+.++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 9999999999887 899999999998 9999999999 6899999999
Q ss_pred cccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHc
Q 027106 128 MNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRS 189 (228)
Q Consensus 128 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (228)
++++|+++.+|...+ ...+.+...++.+++++.+++.++ ++.++++++++.+
T Consensus 79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la~ 130 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH-
T ss_pred hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhcC
Confidence 999999999998762 244778899999999999999988 5667777776653
No 126
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.86 E-value=8.3e-20 Score=145.40 Aligned_cols=172 Identities=26% Similarity=0.331 Sum_probs=142.2
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA--GSKEKVTLL 79 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~--~~~~~~~~~ 79 (228)
++++ |+++++. +++ ++..++++|+++...+++++|++|||.| +|++|.+++|+|+.+|++|+++. +++++.+.+
T Consensus 131 ~~~l-p~~~~~~-~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~ 206 (306)
T cd08258 131 LHEL-PENLSLE-AAA-LTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVA 206 (306)
T ss_pred eEEC-cCCCCHH-HHH-hhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH
Confidence 5678 9999888 554 7888899999998889999999999976 69999999999999999988763 355677777
Q ss_pred HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106 80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV 157 (228)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 157 (228)
+ ++|++.+ +.... ++...+....++ ++|++||+.|+ ..+...+++++++|+++.+|...+. ....+...+
T Consensus 207 ~-~~g~~~~-~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~ 278 (306)
T cd08258 207 K-ELGADAV-NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERI 278 (306)
T ss_pred H-HhCCccc-CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHH
Confidence 8 8999877 77665 777888777765 89999999975 6888999999999999999986521 234456777
Q ss_pred HhhhceeeceecccchhHHHHHHHHHHHHHHcC
Q 027106 158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190 (228)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 190 (228)
+.+++++.|++.+. ++.++++++++++|
T Consensus 279 ~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~ 306 (306)
T cd08258 279 IQKELSVIGSRSST-----PASWETALRLLASG 306 (306)
T ss_pred hhcCcEEEEEecCc-----hHhHHHHHHHHhcC
Confidence 78999999999877 57788999988775
No 127
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.84 E-value=2.2e-19 Score=140.11 Aligned_cols=169 Identities=31% Similarity=0.445 Sum_probs=137.1
Q ss_pred cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106 2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81 (228)
Q Consensus 2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~ 81 (228)
++++ |+++++. +++.+++++.|||+++.....+.+|++|||+|+.+ +|++++++++..|.+|+++++++++.+.++
T Consensus 100 ~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~- 175 (271)
T cd05188 100 LVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK- 175 (271)
T ss_pred eEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-
Confidence 5678 9999988 78888899999999998877789999999999855 999999999999999999999999999998
Q ss_pred HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
++|.+.+++..+. +....+. ...+ ++|++++++++ .....++++++++|+++.+|...... ........+.
T Consensus 176 ~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~ 248 (271)
T cd05188 176 ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP-----PLDDLRRLLF 248 (271)
T ss_pred HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC-----CcccHHHHHh
Confidence 8898887877665 5555555 4444 89999999998 78899999999999999999765321 1222456678
Q ss_pred hhceeeceecccchhHHHHHHHHHHHH
Q 027106 160 KRIKFQGFLAADHLNLYQDFISTTCNH 186 (228)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (228)
+++++.++.... ...++.++++
T Consensus 249 ~~~~~~~~~~~~-----~~~~~~~~~~ 270 (271)
T cd05188 249 KELTIIGSTGGT-----REDFEEALDL 270 (271)
T ss_pred cceEEEEeecCC-----HHHHHHHHhh
Confidence 899999988776 2345454443
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.67 E-value=1.1e-16 Score=111.09 Aligned_cols=122 Identities=24% Similarity=0.302 Sum_probs=80.7
Q ss_pred hCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc--hhHH-HHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106 83 LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG--AEMQ-EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY 159 (228)
Q Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 159 (228)
+|+++++|+++. ++ ..+++||+|||++| ++.+ ..++++| ++|+++.++. . ........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~ 61 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRL 61 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHH
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhh
Confidence 589999999865 66 22358999999999 6544 7777888 9999999873 0 01111111
Q ss_pred hhceeeceecccc-h-hHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106 160 KRIKFQGFLAADH-L-NLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223 (228)
Q Consensus 160 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl 223 (228)
+...+.+...... + +..++.++.+.+++.+|+++|.+..+||++++.+|++.+++++..||+||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2222222222210 1 22457799999999999999999999999999999999999999999997
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.57 E-value=1e-13 Score=112.84 Aligned_cols=176 Identities=11% Similarity=0.064 Sum_probs=130.9
Q ss_pred HHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHH
Q 027106 25 TAYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKR 103 (228)
Q Consensus 25 ta~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 103 (228)
..+.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++ .+|+.. ++. .+.+
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~~------~e~v-- 255 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MTM------EEAV-- 255 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-ccH------HHHH--
Confidence 34555544434 368999999995 99999999999999999999999999999998 888743 211 1122
Q ss_pred HCCCCccEEEcCcchh-HHHHH-HHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHH
Q 027106 104 YFPDGIDIYFDNVGAE-MQEAA-IANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIS 181 (228)
Q Consensus 104 ~~~~~~d~vld~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (228)
.+.|+|++|+|.. .+... ++.++++|+++.+|.. ...++...+..+++++.+...+.. ...++
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~ 320 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP 320 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence 2589999999974 56655 9999999999999943 225777888888998888776531 11344
Q ss_pred --HHHHHHHcCCC-cc--cccee-----cccC-cHHHHHHHhHcCCC-cceEEEEec
Q 027106 182 --TTCNHLRSGAI-YP--LEDIS-----DGVE-SIPSAFTGLFQGGN-IGKKVVRIT 226 (228)
Q Consensus 182 --~~~~~~~~g~i-~~--~~~~~-----~~~~-~~~~A~~~~~~~~~-~gkvvl~~~ 226 (228)
..+.++.+|++ .. .+... ++|+ |+.++++.+.++.. ..|+++.+.
T Consensus 321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 68999999998 32 23333 4788 99999999987763 357877654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.57 E-value=7.7e-14 Score=116.30 Aligned_cols=150 Identities=14% Similarity=0.109 Sum_probs=109.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccCh------------hhHHHHHH
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEE------------TDLKAALK 102 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~------------~~~~~~~~ 102 (228)
..++++|+|.|+ |++|+++++.|+.+|++|++++.++++++.++ ++|++.+ ++..+. .++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 468999999996 99999999999999999999999999999999 8999754 444321 02222222
Q ss_pred HH-CC--CCccEEEcCcchh------H-HHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh-hhceeeceeccc
Q 027106 103 RY-FP--DGIDIYFDNVGAE------M-QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY-KRIKFQGFLAAD 171 (228)
Q Consensus 103 ~~-~~--~~~d~vld~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 171 (228)
+. .+ +++|++|+|++.+ . .+.+++.++++|+++.+|...+.+.+ .+.+...++. +++++.|.....
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDLP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCCc
Confidence 22 33 3799999999852 4 49999999999999999986544321 1222334454 788888876433
Q ss_pred chhHHHHHHHHHHHHHHcCCCccc
Q 027106 172 HLNLYQDFISTTCNHLRSGAIYPL 195 (228)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~g~i~~~ 195 (228)
.++.++..+++.++.+...
T Consensus 317 -----~~~p~~As~lla~~~i~l~ 335 (509)
T PRK09424 317 -----SRLPTQSSQLYGTNLVNLL 335 (509)
T ss_pred -----hhHHHHHHHHHHhCCccHH
Confidence 3555568888888877543
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.97 E-value=1.2e-08 Score=79.96 Aligned_cols=171 Identities=15% Similarity=0.174 Sum_probs=100.9
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCC
Q 027106 33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 107 (228)
.+.+++|++||..|+ |+ |..+.++++..|. +|++++.+++..+.+++. +|...+ ..... ++.+ + .+.++
T Consensus 72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCC
Confidence 356889999999994 66 8888888888775 799999999998888732 333322 11111 2211 1 12234
Q ss_pred CccEEEcCc------c-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHH
Q 027106 108 GIDIYFDNV------G-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180 (228)
Q Consensus 108 ~~d~vld~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (228)
.||+|+... . ...+..+.+.|+|||+++..+...... .+ ....+...+.+...... ...
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~-----~~~ 211 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE-------LP--EEIRNDAELYAGCVAGA-----LQE 211 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC-------CC--HHHHHhHHHHhccccCC-----CCH
Confidence 799998543 1 248999999999999999987654221 11 11122222221111111 112
Q ss_pred HHHHHHHHcCCCcc---ccceecccCcHHHHHHHh--HcCCCcceEEE
Q 027106 181 STTCNHLRSGAIYP---LEDISDGVESIPSAFTGL--FQGGNIGKKVV 223 (228)
Q Consensus 181 ~~~~~~~~~g~i~~---~~~~~~~~~~~~~A~~~~--~~~~~~gkvvl 223 (228)
+++.+++++..+.. .....+++++..++++.+ ..+...++.+.
T Consensus 212 ~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 212 EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 34455555533332 233445889999999888 55444444443
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.94 E-value=9.3e-09 Score=86.01 Aligned_cols=108 Identities=20% Similarity=0.217 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccCh------------hhHHHHHHH
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEE------------TDLKAALKR 103 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~------------~~~~~~~~~ 103 (228)
.++++|+|.|+ |.+|+++++.++.+|++|++++.++++++.++ ++|.+.+ ++..+. +++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 45789999996 99999999999999999999999999999999 8998652 222110 133333333
Q ss_pred HCC---CCccEEEcCc---ch--h--HHHHHHHccccCcEEEEEeeecccCCC
Q 027106 104 YFP---DGIDIYFDNV---GA--E--MQEAAIANMNTYGRVAVCGVISEYTDG 146 (228)
Q Consensus 104 ~~~---~~~d~vld~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~ 146 (228)
... .++|++|+|+ |. + ...+.++.+++|+.++.++...+++++
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E 292 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCE 292 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEE
Confidence 222 2799999999 53 2 677889999999999999987777653
No 133
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.78 E-value=5.1e-08 Score=73.13 Aligned_cols=106 Identities=24% Similarity=0.355 Sum_probs=78.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHHHHCCC--CccE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALKRYFPD--GIDI 111 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~--~~d~ 111 (228)
+++.++|+||++|+|.+.++.....|++|+.+.|+.++++.+.++++. ...+|..+..+....+...... .+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 457899999999999999999999999999999999999999888983 2345665543555555554443 6999
Q ss_pred EEcCcchh-----------HHHH---------------HHHcc--ccCcEEEEEeeeccc
Q 027106 112 YFDNVGAE-----------MQEA---------------AIANM--NTYGRVAVCGVISEY 143 (228)
Q Consensus 112 vld~~g~~-----------~~~~---------------~~~~l--~~~G~~v~~g~~~~~ 143 (228)
+++++|-. .|.. .+..| +..|.++.+|+..+.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~ 144 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR 144 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc
Confidence 99998832 2222 22222 236899999987754
No 134
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.71 E-value=4.4e-07 Score=74.02 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=74.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc-
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG- 117 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g- 117 (228)
+.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+...++........+.+++.+.+. .+|+||+|++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence 456999995 999999999999999999999999888887764566432122222213333332 5899999973
Q ss_pred --h--h--HHHHHHHccccCcEEEEEeeecccCCC
Q 027106 118 --A--E--MQEAAIANMNTYGRVAVCGVISEYTDG 146 (228)
Q Consensus 118 --~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~ 146 (228)
. + .....++.+++++.++.++...+++++
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e 275 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVE 275 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCcc
Confidence 2 2 247788889999999999987776653
No 135
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.63 E-value=2.5e-07 Score=67.48 Aligned_cols=79 Identities=15% Similarity=0.338 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccCh---hhHHHHHHHHCCCCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKEE---TDLKAALKRYFPDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~~---~~~~~~~~~~~~~~~d~v 112 (228)
.|.+|||+||++|+|+.+++-...+|-+|+++.|++++++.++.+... ..+.|..+. +.+.+.+.+..+ ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 478999999999999999999999999999999999999998833322 344555543 124444444333 58999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
++|+|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 99887
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.62 E-value=7.2e-07 Score=73.44 Aligned_cols=104 Identities=18% Similarity=0.190 Sum_probs=77.8
Q ss_pred HHHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHH
Q 027106 24 LTAYAGLFEIGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALK 102 (228)
Q Consensus 24 ~ta~~~l~~~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 102 (228)
...|.++.+..++. .|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|+. +.+ +.+.+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~~------l~eal- 265 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VMT------MEEAA- 265 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ecC------HHHHH-
Confidence 34455554443554 8999999995 99999999999999999999998888776666 55653 221 11122
Q ss_pred HHCCCCccEEEcCcchh-HHH-HHHHccccCcEEEEEeeec
Q 027106 103 RYFPDGIDIYFDNVGAE-MQE-AAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 103 ~~~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 141 (228)
.++|+|++++|.. .+. ..+..+++++.++.+|...
T Consensus 266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 2589999999874 554 6789999999999998643
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.60 E-value=1.6e-06 Score=68.71 Aligned_cols=94 Identities=18% Similarity=0.294 Sum_probs=74.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.|.+|+|.|. |.+|+.+++.++.+|++|+++++++++.+.++ ++|...+ ... +..+.+. ++|+||++++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~~---~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HLS---ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cHH---HHHHHhC-----CCCEEEECCC
Confidence 6899999995 99999999999999999999999988888887 7886432 111 2222222 5899999988
Q ss_pred hh-HHHHHHHccccCcEEEEEeeecc
Q 027106 118 AE-MQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 118 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
.. .....++.+++++.++.++..++
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 65 44667788999999999887654
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.56 E-value=1.6e-06 Score=71.03 Aligned_cols=101 Identities=20% Similarity=0.233 Sum_probs=75.3
Q ss_pred HHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH
Q 027106 26 AYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 26 a~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 104 (228)
++.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...++ ..|+. +.+ ..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------leeal--- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VMT------MEEAA--- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eCC------HHHHH---
Confidence 3444434333 468999999995 99999999999999999999998888776666 66652 221 11122
Q ss_pred CCCCccEEEcCcchh-HHH-HHHHccccCcEEEEEeee
Q 027106 105 FPDGIDIYFDNVGAE-MQE-AAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 105 ~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~ 140 (228)
.+.|++|+++|.. .+. ..+..+++++.++.+|..
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 2479999999874 454 488999999999999864
No 139
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.52 E-value=9.6e-07 Score=67.97 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=60.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ce--eeccChhhHHHHHH-HHCC-
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-----DA--FNYKEETDLKAALK-RYFP- 106 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-----~~--~~~~~~~~~~~~~~-~~~~- 106 (228)
...+.+++|+||++|+|...+..+...|.+++.+.|++++++.+.+++.-. .+ +|.++. +-...+. ++..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhc
Confidence 356789999999999999999998999999999999999998887655431 12 345554 3333333 2222
Q ss_pred C-CccEEEcCcch
Q 027106 107 D-GIDIYFDNVGA 118 (228)
Q Consensus 107 ~-~~d~vld~~g~ 118 (228)
+ .+|+++|++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 2 79999999983
No 140
>PLN02494 adenosylhomocysteinase
Probab=98.50 E-value=2.4e-06 Score=70.69 Aligned_cols=101 Identities=17% Similarity=0.196 Sum_probs=77.0
Q ss_pred HHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH
Q 027106 26 AYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 26 a~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 104 (228)
.+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|... + +..+.+.
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~-- 308 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS-- 308 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh--
Confidence 35555444444 67999999995 99999999999999999999998887766666 666642 2 1122222
Q ss_pred CCCCccEEEcCcchh--HHHHHHHccccCcEEEEEeee
Q 027106 105 FPDGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 105 ~~~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~ 140 (228)
..|+++++.|.. .....++.|++++.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 379999999975 348899999999999999873
No 141
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=2.4e-06 Score=65.46 Aligned_cols=104 Identities=18% Similarity=0.192 Sum_probs=70.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCce--eeccChhhHHHHHHHHC--CCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG---FDDA--FNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~~--~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
++++|||+|++|++|..+++.+...|++|+++++++++.+.+.+++. .... .|..+.+...+.+.+.. -+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999999999999887766632332 1121 23333323333333221 13689
Q ss_pred EEEcCcchh------------------------HHHHHHHccccCcEEEEEeeec
Q 027106 111 IYFDNVGAE------------------------MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 111 ~vld~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
.++.+.+.. .++..++.++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 998887631 2445566777789999988754
No 142
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.8e-06 Score=65.84 Aligned_cols=77 Identities=22% Similarity=0.365 Sum_probs=57.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCC--CCccEEEcCc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFP--DGIDIYFDNV 116 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~--~~~d~vld~~ 116 (228)
+++||+||+|++|..+++.+...|++|++++++.++.+.+. ..+...+ .|..+.+.+.+.+..... +++|++++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999998889999999999888777666 5454332 455554344444443322 3799999998
Q ss_pred c
Q 027106 117 G 117 (228)
Q Consensus 117 g 117 (228)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=98.44 E-value=2.4e-06 Score=75.45 Aligned_cols=104 Identities=22% Similarity=0.282 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----CceeeccChhhHHHHHHHHC--CCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-----DDAFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+|++|||+||+|++|..+++.+...|++|++++++.++.+.+.+.++. ....|..+.......+.+.. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 678999999999999999999999999999999998887766545543 11234444323333333322 24799
Q ss_pred EEEcCcch--------------------------hHHHHHHHcccc---CcEEEEEeeec
Q 027106 111 IYFDNVGA--------------------------EMQEAAIANMNT---YGRVAVCGVIS 141 (228)
Q Consensus 111 ~vld~~g~--------------------------~~~~~~~~~l~~---~G~~v~~g~~~ 141 (228)
++|+++|. ..++.+++.+++ +|+++.+++..
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 99999982 123444566655 68999988754
No 144
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.43 E-value=5.5e-06 Score=65.12 Aligned_cols=104 Identities=19% Similarity=0.337 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHH---HCCCCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKR---YFPDGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~---~~~~~~d~vl 113 (228)
.+++|+|+||+|++|..+++.+...|++|+++++++++.+.+. ..+...+ .|..+.+++...+.+ ...+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4679999999999999999988889999999999988887776 5554332 355544233333333 2334799999
Q ss_pred cCcchh--------------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106 114 DNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVISE 142 (228)
Q Consensus 114 d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 142 (228)
+++|.. ..+.+++.+.. .|+++.+++..+
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 987621 02345555543 478999876543
No 145
>PRK12742 oxidoreductase; Provisional
Probab=98.43 E-value=5.1e-06 Score=63.57 Aligned_cols=103 Identities=20% Similarity=0.249 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
++++|||+||+|++|..+++.+...|++|+.+.+ ++++.+.+.++.+...+ .|..+...+.+.+.+. +++|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4789999999999999999998889999887754 45555555435565332 3444432333333321 369999998
Q ss_pred cchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106 116 VGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 116 ~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 142 (228)
+|.. .+ ..+.+.++.+|+++.++...+
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 8631 01 233455666789999886543
No 146
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.43 E-value=1.5e-06 Score=69.46 Aligned_cols=105 Identities=24% Similarity=0.216 Sum_probs=70.4
Q ss_pred ccCCCCCCCcchhhhccchhHHHHHHHHHHhcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 027106 3 RKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGK---PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTL 78 (228)
Q Consensus 3 ~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~ 78 (228)
+++ |+.+..+ .+....+..+++.++..... --++.+|+|.|+ |.+|..+++.++..|+ +|+++++++++.+.
T Consensus 142 ~~~-~k~vr~e--t~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 142 IKV-GKRVRTE--TGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHH-HHHHhhh--cCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 345 6666666 33334455666666633222 147899999995 9999999999998776 89999999887655
Q ss_pred HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhH
Q 027106 79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120 (228)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 120 (228)
+.+++|.. +.+.+ +..+.+. ..|+||.|++.+.
T Consensus 218 la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~ 250 (311)
T cd05213 218 LAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPH 250 (311)
T ss_pred HHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCc
Confidence 54488873 33221 3333332 4799999999753
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.39 E-value=4.6e-06 Score=61.65 Aligned_cols=109 Identities=19% Similarity=0.233 Sum_probs=77.2
Q ss_pred cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceee-ccCh
Q 027106 19 LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFN-YKEE 94 (228)
Q Consensus 19 l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~ 94 (228)
+..+...|. ++ +...+++|++||=+| +|.|..++-+|+..+ +|+.+.+.++=.+.+++ .+|...+.. ..+.
T Consensus 55 is~P~~vA~-m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG 129 (209)
T COG2518 55 ISAPHMVAR-ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG 129 (209)
T ss_pred ecCcHHHHH-HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc
Confidence 334444444 33 678899999999999 788999999999888 99999988774444432 677754322 2222
Q ss_pred hhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEe
Q 027106 95 TDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 95 ~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g 138 (228)
...+.+. +||.|+-+++.+ .-+..++.|++||+++.--
T Consensus 130 ------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 130 ------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV 169 (209)
T ss_pred ------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence 1222333 899998877764 5577789999999999943
No 148
>PRK06182 short chain dehydrogenase; Validated
Probab=98.38 E-value=5.4e-06 Score=64.99 Aligned_cols=79 Identities=25% Similarity=0.406 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vld 114 (228)
++++++|+|++|++|..+++.+...|++|+++++++++++.+. ..+... ..|..+.+++...+.+.. .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4679999999999999999998889999999999988776655 444432 245555434444444332 237999999
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
No 149
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.36 E-value=3.5e-06 Score=65.44 Aligned_cols=106 Identities=21% Similarity=0.314 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc-e----eeccChhhHHHHHHHHC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD-A----FNYKEETDLKAALKRYF--PD 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-~----~~~~~~~~~~~~~~~~~--~~ 107 (228)
.|+.|+|+||++|+|.+.+.-....|++++.+.+..++++.+.+ +.+... + .|.++.++....+.+.. -|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 67899999999999998887777889999888888777766622 333322 2 34454434444443322 24
Q ss_pred CccEEEcCcchh-----------H---------------HHHHHHcccc-C-cEEEEEeeeccc
Q 027106 108 GIDIYFDNVGAE-----------M---------------QEAAIANMNT-Y-GRVAVCGVISEY 143 (228)
Q Consensus 108 ~~d~vld~~g~~-----------~---------------~~~~~~~l~~-~-G~~v~~g~~~~~ 143 (228)
++|++++++|-. . ...+++.|++ + |++|.+++..|.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 899999988731 1 1345666765 3 999999987764
No 150
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.35 E-value=8e-06 Score=63.61 Aligned_cols=104 Identities=16% Similarity=0.186 Sum_probs=69.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
++++++|+||++++|..+++.+...|++|++++++.++.+.+.++++.. . ..|..+.+++.+.+.+... +.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999998889999999999887766665455532 1 2344444244443333221 368999
Q ss_pred EcCcchh-------------------------HHHHHHHcc-ccCcEEEEEeeec
Q 027106 113 FDNVGAE-------------------------MQEAAIANM-NTYGRVAVCGVIS 141 (228)
Q Consensus 113 ld~~g~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~ 141 (228)
++++|.. ..+.+++.+ +++|+++.++...
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 9987631 112233444 5678999988654
No 151
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.32 E-value=6.5e-06 Score=57.50 Aligned_cols=94 Identities=22% Similarity=0.288 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
-++.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++... .+..+ +..+.+. .+|+|+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVI 80 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEE
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEE
Confidence 36889999996 9999999999999999 69999999999888876774432 33443 3222222 489999
Q ss_pred cCcchh---HHHHHHHccccC-cEEEEEee
Q 027106 114 DNVGAE---MQEAAIANMNTY-GRVAVCGV 139 (228)
Q Consensus 114 d~~g~~---~~~~~~~~l~~~-G~~v~~g~ 139 (228)
+|++.. .-...+....+. +.++.++.
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred EecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 998864 222333333221 46666664
No 152
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=98.30 E-value=5.9e-06 Score=55.56 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAK-LFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~-~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
||.+||-.| .|.|..++.+++ ..+++|++++.+++..+.+++.. +...-+..... ++ .......++||+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence 688999999 566888888888 47889999999999999988555 33221221111 33 11111123799998
Q ss_pred cCc-ch----h------HHHHHHHccccCcEEEEE
Q 027106 114 DNV-GA----E------MQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 114 d~~-g~----~------~~~~~~~~l~~~G~~v~~ 137 (228)
... .. . .++.+.+.|+|+|+++.-
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 866 21 1 378889999999999874
No 153
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.28 E-value=1.5e-05 Score=62.11 Aligned_cols=105 Identities=21% Similarity=0.344 Sum_probs=70.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeeccChhhHHHHHHHHCC-CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD---DAFNYKEETDLKAALKRYFP-DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~~-~~~ 109 (228)
+|+++||+||++++|.++++.+...|++|+++++++++.+.+.+++ +.. ...|..+.++....+.+... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5789999999999999999999999999999999887766554333 321 12344444233333333322 479
Q ss_pred cEEEcCcchh--------------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106 110 DIYFDNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVISE 142 (228)
Q Consensus 110 d~vld~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 142 (228)
|++++++|.. ..+.+++.+.. .|+++.++....
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 9999988631 12344555543 489999887543
No 154
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.27 E-value=3.3e-05 Score=60.92 Aligned_cols=112 Identities=17% Similarity=0.175 Sum_probs=78.0
Q ss_pred chhHHHHHHHHHHhc---CC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChh
Q 027106 20 GFSGLTAYAGLFEIG---KP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEET 95 (228)
Q Consensus 20 ~~~~~ta~~~l~~~~---~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 95 (228)
.....+|..++.... .+ -.|++|+|.|. |.+|.++++.++..|++|+++++++++.+.+. +.|... +...
T Consensus 128 ~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~-~~~~--- 201 (287)
T TIGR02853 128 YNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIP-FPLN--- 201 (287)
T ss_pred EccHhHHHHHHHHHHHhcCCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCee-ecHH---
Confidence 445556655553222 11 25889999995 99999999999999999999999988877766 666532 2111
Q ss_pred hHHHHHHHHCCCCccEEEcCcchhH-HHHHHHccccCcEEEEEeeecc
Q 027106 96 DLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 96 ~~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
++.+.+ .+.|+|+++++... -...++.++++..++.++..++
T Consensus 202 ~l~~~l-----~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 202 KLEEKV-----AEIDIVINTIPALVLTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred HHHHHh-----ccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence 222222 25899999987653 2456778889888888886553
No 155
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.27 E-value=8.1e-06 Score=64.85 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--e--eeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--A--FNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~--~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
+|+++||+||+|++|..+++.+...|++|++++++.++.+.+.++++.. . . .|..+.++....+.+... +++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999999999988877665466531 1 1 455544233333333222 3699
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999883
No 156
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.25 E-value=9.6e-06 Score=67.56 Aligned_cols=89 Identities=26% Similarity=0.280 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHhcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106 21 FSGLTAYAGLFEIGK---PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD 96 (228)
Q Consensus 21 ~~~~ta~~~l~~~~~---~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (228)
.+..+++.++..... -.+|++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+.+.+++|.. +++.. +
T Consensus 161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~ 235 (423)
T PRK00045 161 GAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---E 235 (423)
T ss_pred CCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---H
Confidence 355566666633222 367899999995 9999999999999998 8999999988876444377753 33221 3
Q ss_pred HHHHHHHHCCCCccEEEcCcchh
Q 027106 97 LKAALKRYFPDGIDIYFDNVGAE 119 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~~ 119 (228)
..+.+ .++|+||+|++.+
T Consensus 236 ~~~~l-----~~aDvVI~aT~s~ 253 (423)
T PRK00045 236 LPEAL-----AEADIVISSTGAP 253 (423)
T ss_pred HHHHh-----ccCCEEEECCCCC
Confidence 32222 2589999999864
No 157
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.23 E-value=2.3e-05 Score=63.35 Aligned_cols=105 Identities=22% Similarity=0.210 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.++ .|... ..|..+.++....+.+... +++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 567999999999999999999888999999999988776654422 34322 2355544233333332221 369
Q ss_pred cEEEcCcchh--------------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106 110 DIYFDNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVISE 142 (228)
Q Consensus 110 d~vld~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 142 (228)
|++++++|.. ....+++.+.+ .|++|.+++..+
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 9999988731 11234455544 589999887543
No 158
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=98.20 E-value=3e-05 Score=63.70 Aligned_cols=113 Identities=18% Similarity=0.132 Sum_probs=79.6
Q ss_pred hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106 17 GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD 96 (228)
Q Consensus 17 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (228)
.+|..+....+..+....++++|++||-.| .|.|..+..+++..|++|++++.+++..+.+++.. ...-+..... +
T Consensus 146 ~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D 221 (383)
T PRK11705 146 DTLEEAQEAKLDLICRKLQLKPGMRVLDIG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-D 221 (383)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-c
Confidence 344455556666676778899999999999 46788888999988999999999999999998433 2111222111 3
Q ss_pred HHHHHHHHCCCCccEEEcC-----cch----hHHHHHHHccccCcEEEEEe
Q 027106 97 LKAALKRYFPDGIDIYFDN-----VGA----EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~-----~g~----~~~~~~~~~l~~~G~~v~~g 138 (228)
+. +. .+.||.|+.. ++. ..++.+.+.|+|+|.++...
T Consensus 222 ~~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 222 YR----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hh----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 22 11 3479988743 332 36788889999999998854
No 159
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.18 E-value=2.8e-05 Score=64.67 Aligned_cols=99 Identities=21% Similarity=0.257 Sum_probs=73.1
Q ss_pred HHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC
Q 027106 28 AGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 28 ~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
..+.+.. ..-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|+.. . ++.+.+.
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~-~------~leell~---- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQV-V------TLEDVVE---- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCcee-c------cHHHHHh----
Confidence 4443333 3458999999995 99999999999999999999988777655555 456432 1 2222222
Q ss_pred CCccEEEcCcchh-HH-HHHHHccccCcEEEEEeee
Q 027106 107 DGIDIYFDNVGAE-MQ-EAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 107 ~~~d~vld~~g~~-~~-~~~~~~l~~~G~~v~~g~~ 140 (228)
..|+|+.++|.. .+ ...++.|++++.++.+|..
T Consensus 309 -~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 309 -TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred -cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 489999998874 44 4789999999999999864
No 160
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.18 E-value=3.9e-05 Score=59.08 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHC--CCCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYF--PDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d~v 112 (228)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++... ..|..+.++....+.... .+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999988776665554566422 123333323322222221 1368999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
++++|
T Consensus 85 i~~ag 89 (249)
T PRK06500 85 FINAG 89 (249)
T ss_pred EECCC
Confidence 99886
No 161
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.17 E-value=1.5e-05 Score=62.03 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
+++++||+||++++|..+++.+...|++|+++++++++.+.+.++++.. . ..|..+.++....+.+... +.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999999999999999998889999999999988877776455431 1 1344443234333433322 369999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
++++|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99887
No 162
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.16 E-value=3.5e-05 Score=59.91 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=56.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeeccChhhHHHHHHHHC--CCCc
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD----DAFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
.-++.++||+||+|++|..+++.+...|++|+++.++++..+.+.++.... ...|..+.+.....+.+.. -+++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357789999999999999999998889999999998877766655333322 1234444323333332221 1369
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|+|+.++|.
T Consensus 88 d~vi~~ag~ 96 (264)
T PRK12829 88 DVLVNNAGI 96 (264)
T ss_pred CEEEECCCC
Confidence 999988763
No 163
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.16 E-value=4.8e-05 Score=64.06 Aligned_cols=105 Identities=19% Similarity=0.257 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS--KEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDI 111 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~--~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~ 111 (228)
.+|+++||+|++|++|..+++.+...|++|++++++ .+..+.+.++++... .+|..+.+.....+.... .+++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 357899999999999999999999999999998863 233333332555432 245555423333333222 236999
Q ss_pred EEcCcch-----------hHHHHHHH-----------------ccccCcEEEEEeeec
Q 027106 112 YFDNVGA-----------EMQEAAIA-----------------NMNTYGRVAVCGVIS 141 (228)
Q Consensus 112 vld~~g~-----------~~~~~~~~-----------------~l~~~G~~v~~g~~~ 141 (228)
+|+++|. +.++..++ .++++|+++.++...
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~ 345 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSIS 345 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChh
Confidence 9999872 12332222 455679999988644
No 164
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.16 E-value=1.8e-05 Score=61.32 Aligned_cols=80 Identities=19% Similarity=0.200 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vld 114 (228)
+|++|+|+||+|++|..+++.+...|++|+++++++.+.+...++++... ..|..+.+.+...+.+.. .+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899999999999999999998899999999998877665543554422 235555423333333321 136899999
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 86 ~ag 88 (255)
T PRK06057 86 NAG 88 (255)
T ss_pred CCC
Confidence 876
No 165
>PRK06484 short chain dehydrogenase; Validated
Probab=98.16 E-value=2.6e-05 Score=66.88 Aligned_cols=105 Identities=18% Similarity=0.229 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
.|+++||+||++++|...++.+...|++|+++++++++.+.+.++++... ..|..+.++....+.+... +.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999888899999999999888877764565422 2355544344444433322 469999
Q ss_pred EcCcchh------------H---------------HHHHHHccccCcEEEEEeeecc
Q 027106 113 FDNVGAE------------M---------------QEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 113 ld~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
++++|.. . .+.++..++.+|+++.++...+
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9988731 1 2333456666799999887553
No 166
>PRK09186 flagellin modification protein A; Provisional
Probab=98.15 E-value=4.5e-05 Score=59.02 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~~--~ 107 (228)
++.+|||+||+|++|...+..+...|++|+++++++++.+.+.+++ +... ..|..+.+.+...+.+... +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999988889999999998887765554333 2211 2354444234343433221 3
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|+++++++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999875
No 167
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.14 E-value=4.5e-05 Score=59.89 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=68.9
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSK---EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
.|+++||+||+ +|+|.++++.+...|++|+++.++. ++.+.+.++++... .+|..+.++....+.+... ++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47899999986 7999999998888999999988774 23333332455322 2455554344444443322 47
Q ss_pred ccEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeec
Q 027106 109 IDIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 109 ~d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+|++++++|.. ..+.+++.+..+|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 99999988731 1133556777789999987654
No 168
>PRK06484 short chain dehydrogenase; Validated
Probab=98.12 E-value=4.2e-05 Score=65.55 Aligned_cols=81 Identities=25% Similarity=0.376 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
+|+++||+|+++++|.++++.+...|++|+.++++.++.+.+.++++... .+|..+.+++...+.+... +++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 67899999999999999999999999999999998888776664666422 2454444344444433322 369999
Q ss_pred EcCcch
Q 027106 113 FDNVGA 118 (228)
Q Consensus 113 ld~~g~ 118 (228)
++++|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 998763
No 169
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=98.11 E-value=1.8e-05 Score=61.84 Aligned_cols=104 Identities=22% Similarity=0.303 Sum_probs=65.3
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHH
Q 027106 27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKR 103 (228)
Q Consensus 27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~ 103 (228)
+..+.+..++++|++||-+| .|-|-.+..+|+..|++|++++.++++.+.++++ .|....+..... ++. +
T Consensus 51 ~~~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~ 123 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----D 123 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G
T ss_pred HHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----c
Confidence 34455678999999999999 5588888999999999999999999998887643 444222221111 221 1
Q ss_pred HCCCCccEEEc-----Ccch----hHHHHHHHccccCcEEEEEe
Q 027106 104 YFPDGIDIYFD-----NVGA----EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 104 ~~~~~~d~vld-----~~g~----~~~~~~~~~l~~~G~~v~~g 138 (228)
+ ++.||.|+. .+|. ..++.+.++|+|||+++.-.
T Consensus 124 ~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 124 L-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred c-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 126898754 4443 26888889999999998643
No 170
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.11 E-value=4.6e-05 Score=58.28 Aligned_cols=80 Identities=19% Similarity=0.306 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cce--eeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---DDA--FNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~--~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.. .+. .|..+..++.+.+..... +++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999988888899999999988776655434432 111 233433244443433221 3699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++|++.|
T Consensus 85 ~vi~~ag 91 (237)
T PRK07326 85 VLIANAG 91 (237)
T ss_pred EEEECCC
Confidence 9998876
No 171
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.11 E-value=1.7e-05 Score=63.91 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
++++|||+||++++|.++++.+...|++|+++++++++++.+.+ +.|... ..|..+.++....+.+.. .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999888765542 234422 235544423333222221 2479
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 86 D~lVnnAG 93 (330)
T PRK06139 86 DVWVNNVG 93 (330)
T ss_pred CEEEECCC
Confidence 99999987
No 172
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.11 E-value=6.3e-05 Score=57.97 Aligned_cols=103 Identities=18% Similarity=0.197 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+++++||+||+|++|..+++.+...|.+|+++.++.+ +.+.+.++ .+.. . ..|..+.++....+.+... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999988889999999887643 33333212 2321 1 1344444233333333222 36
Q ss_pred ccEEEcCcchh--------------------HHHHHHHccccCcEEEEEeee
Q 027106 109 IDIYFDNVGAE--------------------MQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 109 ~d~vld~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~ 140 (228)
+|+++.+++.. .++.+.+.+..+|+++.+++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89988877531 334455555667899988763
No 173
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.11 E-value=5.8e-05 Score=55.68 Aligned_cols=105 Identities=16% Similarity=0.293 Sum_probs=73.9
Q ss_pred CCCEEEEEcC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeeccChhh---HHHHHHHHCCCCccEE
Q 027106 38 KGEKVFVSAA-SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DDAFNYKEETD---LKAALKRYFPDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga-~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~---~~~~~~~~~~~~~d~v 112 (228)
....|||+|+ .||+|.+++.-....|+.|+++.++.++-..+..++|. ..-+|..++++ +...++..+.|+.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3468999985 78899999988889999999999988766655547776 23355554423 4445566666799999
Q ss_pred EcCcchh-----------HHHH----------------HHHccccCcEEEEEeeecc
Q 027106 113 FDNVGAE-----------MQEA----------------AIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 113 ld~~g~~-----------~~~~----------------~~~~l~~~G~~v~~g~~~~ 142 (228)
++++|.+ .++. ..-+.+..|++|.+|+..+
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 9987743 1111 1224567899999998654
No 174
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.11 E-value=2.3e-05 Score=61.37 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCc-eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG-FDD-AFNYKEETDLKAALKRYFP--DGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vl 113 (228)
.|.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|..+.+++...+..... +++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 36799999999999999998888889999999999888766553555 221 2355544343333333221 4799999
Q ss_pred cCcc
Q 027106 114 DNVG 117 (228)
Q Consensus 114 d~~g 117 (228)
+++|
T Consensus 84 ~~ag 87 (273)
T PRK07825 84 NNAG 87 (273)
T ss_pred ECCC
Confidence 9887
No 175
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.11 E-value=2.2e-05 Score=61.17 Aligned_cols=80 Identities=24% Similarity=0.225 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+..+.. . ..|..+..+..+.+.+... +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999988889999999999888777666333321 1 1344443233333333222 368999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
++++|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99876
No 176
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.10 E-value=4.5e-05 Score=59.28 Aligned_cols=79 Identities=20% Similarity=0.342 Sum_probs=55.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeeccChhhHHHHHHHH---CCCCccEE
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD----DAFNYKEETDLKAALKRY---FPDGIDIY 112 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~---~~~~~d~v 112 (228)
+++||+||+|++|..+++.+...|++|++++++.++.+.+.+..+.. ..+|..+..++.+.+... ..+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 47999999999999999988889999999999988877665344311 123555442444333332 13479999
Q ss_pred EcCcch
Q 027106 113 FDNVGA 118 (228)
Q Consensus 113 ld~~g~ 118 (228)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 998874
No 177
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.09 E-value=4.1e-05 Score=58.81 Aligned_cols=78 Identities=22% Similarity=0.342 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
++.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+... ..|..+.......+.. .+++|++|+++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 57899999999999999999999999999999998887766653455432 2344443222232222 23699999988
Q ss_pred c
Q 027106 117 G 117 (228)
Q Consensus 117 g 117 (228)
|
T Consensus 86 g 86 (245)
T PRK07060 86 G 86 (245)
T ss_pred C
Confidence 7
No 178
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.08 E-value=6.1e-05 Score=64.26 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=68.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CC-----Cc--eeeccChhh
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--------GF-----DD--AFNYKEETD 96 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~-----~~--~~~~~~~~~ 96 (228)
...+.+.|++|||+||+|++|..+++.+...|++|++++++.++.+.+.+.+ |. .. ..|..+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~-- 150 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP-- 150 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH--
Confidence 3455678999999999999999999988889999999999988775543221 21 01 1233332
Q ss_pred HHHHHHHHCCCCccEEEcCcchh----------------HHHHHHHcccc--CcEEEEEeeec
Q 027106 97 LKAALKRYFPDGIDIYFDNVGAE----------------MQEAAIANMNT--YGRVAVCGVIS 141 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~~----------------~~~~~~~~l~~--~G~~v~~g~~~ 141 (228)
+.+.+.. +++|+||+++|.. ....+++.+.. .|+||.++...
T Consensus 151 --esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 151 --DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred --HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1222222 3699999998742 11223344433 36999988754
No 179
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.08 E-value=5.1e-05 Score=58.45 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +.. . ..|..+.++....+.+... +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988889999999998887665543232 221 1 2244443233333322211 379
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999998874
No 180
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.08 E-value=6.9e-05 Score=58.06 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=66.7
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
.|++++|+||+ +++|.++++.+...|++|+++.++++..+.++ ++.... .+|..+.++..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999998 79999999888889999999987744333344 332211 1344443233333333222 469
Q ss_pred cEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106 110 DIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 110 d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
|++++++|.. ..+.+++.++.+|+++.++...+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 9999987621 11334566667799988876543
No 181
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.08 E-value=7.7e-05 Score=56.95 Aligned_cols=80 Identities=11% Similarity=0.143 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-eeeccChhhHHHHHHHHCC--CCccE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD-AFNYKEETDLKAALKRYFP--DGIDI 111 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~ 111 (228)
++.++||+|++|++|..+++.+...|++|+++++++++.+...++ .+... ..|..+.++....+.+... +++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 478999999999999999998888899999999877654322212 22221 1343333233333332221 37999
Q ss_pred EEcCcc
Q 027106 112 YFDNVG 117 (228)
Q Consensus 112 vld~~g 117 (228)
|++++|
T Consensus 86 vi~~ag 91 (239)
T PRK12828 86 LVNIAG 91 (239)
T ss_pred EEECCc
Confidence 999876
No 182
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.06 E-value=7e-05 Score=58.35 Aligned_cols=105 Identities=17% Similarity=0.142 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
.++ +|.|.|+ |.+|.-++.+|..+|++|...+.+.+|+..+.+.++-.--.-++....+.+.+. +.|++|.++
T Consensus 167 ~~~-kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaV 239 (371)
T COG0686 167 LPA-KVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAV 239 (371)
T ss_pred CCc-cEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEE
Confidence 444 5667785 999999999999999999999999999999986666542222333325555544 378888754
Q ss_pred --ch---h--HHHHHHHccccCcEEEEEeeecccCCCcC
Q 027106 117 --GA---E--MQEAAIANMNTYGRVAVCGVISEYTDGKK 148 (228)
Q Consensus 117 --g~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 148 (228)
++ + ..++.++.|+||+.++.+....++.++..
T Consensus 240 LIpgakaPkLvt~e~vk~MkpGsVivDVAiDqGGc~Et~ 278 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQGGCFETS 278 (371)
T ss_pred EecCCCCceehhHHHHHhcCCCcEEEEEEEcCCCceecc
Confidence 22 1 67788999999999999998877766443
No 183
>PRK08017 oxidoreductase; Provisional
Probab=98.05 E-value=3.4e-05 Score=59.74 Aligned_cols=77 Identities=17% Similarity=0.311 Sum_probs=56.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHH---HHHHHHCCCCccEEEcC
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLK---AALKRYFPDGIDIYFDN 115 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~---~~~~~~~~~~~d~vld~ 115 (228)
++++|+||+|++|..+++.+...|++|++++++.++.+.++ ..+...+ .|..+.+... +.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 58999999999999999999989999999999998887777 6665432 3444432322 23333333468888887
Q ss_pred cc
Q 027106 116 VG 117 (228)
Q Consensus 116 ~g 117 (228)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
No 184
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.05 E-value=3e-05 Score=60.51 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.++||+||+|++|..+++.+...|++|+++++++++.+...+++ +.. . .+|..+.+++...+.+... +++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988889999999998877654443232 221 1 2344444244444443321 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998775
No 185
>PRK06196 oxidoreductase; Provisional
Probab=98.05 E-value=3.9e-05 Score=61.47 Aligned_cols=80 Identities=16% Similarity=0.251 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeeccChhhHHHHHHHHCC--CCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG-FD-DAFNYKEETDLKAALKRYFP--DGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~~--~~~d~vl 113 (228)
.|.+|+|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+.+++...+.+... +++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 57899999999999999998888899999999998877665542332 21 12344444344444443322 4799999
Q ss_pred cCcc
Q 027106 114 DNVG 117 (228)
Q Consensus 114 d~~g 117 (228)
+++|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9887
No 186
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.05 E-value=9.9e-05 Score=57.37 Aligned_cols=112 Identities=19% Similarity=0.258 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHH
Q 027106 22 SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLK 98 (228)
Q Consensus 22 ~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~ 98 (228)
+-..++..+.+..++++|++||=+| .|-|-+++-+|+..|++|++++-|+++.+.+++ +.|...-+...-. ++.
T Consensus 56 AQ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~r 132 (283)
T COG2230 56 AQRAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DYR 132 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-ccc
Confidence 3445666676889999999999999 678999999999999999999999999888874 2444311111100 111
Q ss_pred HHHHHHCCCCccEEE-----cCcch----hHHHHHHHccccCcEEEEEeeec
Q 027106 99 AALKRYFPDGIDIYF-----DNVGA----EMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 99 ~~~~~~~~~~~d~vl-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
.+ .+.||.|+ +.+|. ..+..+.++|+++|++++-....
T Consensus 133 ----d~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 133 ----DF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred ----cc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 11 12478775 34553 37788889999999999977654
No 187
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.04 E-value=9.9e-05 Score=57.80 Aligned_cols=78 Identities=14% Similarity=0.216 Sum_probs=52.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--c--eeeccChhhHHHHHHHHC--CCCccE
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD--D--AFNYKEETDLKAALKRYF--PDGIDI 111 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~--~~~~~~~~~~~~~~~~~~--~~~~d~ 111 (228)
+++|+||+|++|..+++.+...|++|+++.+++++.+.+.++ .+.. . ..|..+.++....+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999998888999999999887765544322 2322 1 245555423333333321 136999
Q ss_pred EEcCcch
Q 027106 112 YFDNVGA 118 (228)
Q Consensus 112 vld~~g~ 118 (228)
+++++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9998873
No 188
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.04 E-value=3.6e-05 Score=59.95 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYF--PD 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~--~~ 107 (228)
.|++++|+||++++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|..+.++....+.+.. -+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999887765544222 1111 234444423333333322 14
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|++++++|
T Consensus 87 ~id~li~~Ag 96 (265)
T PRK07062 87 GVDMLVNNAG 96 (265)
T ss_pred CCCEEEECCC
Confidence 6999999987
No 189
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.03 E-value=4.9e-05 Score=61.08 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccC-hhhHHHHHHHHCCC-
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKE-ETDLKAALKRYFPD- 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~-~~~~~~~~~~~~~~- 107 (228)
.|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++ +... .+|..+ ..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999988888788999999999998876654332 2111 234332 11333444444444
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
.+|++++++|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 5779998876
No 190
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.03 E-value=0.00012 Score=56.91 Aligned_cols=79 Identities=25% Similarity=0.256 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+++++||+||+|++|.++++.+...|++|+++++++...+... ++ +.. ...|..+.++....+.+... +++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999988889999999998754323322 32 322 12354443233333333221 369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999886
No 191
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.03 E-value=3.4e-05 Score=59.97 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD---DAFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~~~~~~~--~ 107 (228)
.+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+... +
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999988889999999999887766554333 211 11244443234333333221 3
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|++++++|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999887
No 192
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=98.02 E-value=0.00015 Score=54.16 Aligned_cols=100 Identities=19% Similarity=0.290 Sum_probs=69.7
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCC-CceeeccChhhHHHHHHHHC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGF-DDAFNYKEETDLKAALKRYF 105 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~-~~~~~~~~~~~~~~~~~~~~ 105 (228)
...++.++++||..|+ |. |..++.+++..+ .+|++++.+++..+.+++ .+|. +.+.... . +..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhh-c
Confidence 4568899999999994 55 888899988764 489999999998887653 3552 3322221 1 33222222 2
Q ss_pred CCCccEEEcCcch----hHHHHHHHccccCcEEEE
Q 027106 106 PDGIDIYFDNVGA----EMQEAAIANMNTYGRVAV 136 (228)
Q Consensus 106 ~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~ 136 (228)
.+.+|.|+...+. ..+..+.+.|+++|+++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 2479999975542 377888899999999986
No 193
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.01 E-value=4.1e-05 Score=61.35 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYF--PD 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~--~~ 107 (228)
.|.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++ +... .+|..+.++....+.+.. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999888889999999999887765544232 1111 134444423333333332 23
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|++++++|
T Consensus 93 ~iD~li~nAG 102 (313)
T PRK05854 93 PIHLLINNAG 102 (313)
T ss_pred CccEEEECCc
Confidence 7999999887
No 194
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.01 E-value=3.7e-05 Score=59.50 Aligned_cols=80 Identities=23% Similarity=0.306 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+|+++||+|+++++|..+++.+...|++|++++++.++.+.+.+++ +.. ...|..+.++..+.+.+... +++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999998889999999999887766554333 221 12344443234333333221 479
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99999876
No 195
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.01 E-value=4.4e-05 Score=58.00 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=54.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
++|+|+|++|++|...++.+...|++|+++++++++.+.++ +++... ..|..+.+++.+.+.....+++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999999888888999999998877666555 443222 234444424444444443347999998875
No 196
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.00 E-value=3.6e-05 Score=61.04 Aligned_cols=81 Identities=21% Similarity=0.356 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
.+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.++....+.... -+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4579999999999999999988888999999999988766554332 321 1 134444323333333221 1369
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999873
No 197
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.99 E-value=5e-05 Score=59.67 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
.++++||+||+|++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+.....+.+... +++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999999999999999888889999999999887766652332211 2344443233333333221 368999
Q ss_pred EcCcch
Q 027106 113 FDNVGA 118 (228)
Q Consensus 113 ld~~g~ 118 (228)
++++|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999874
No 198
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.98 E-value=6.7e-05 Score=58.39 Aligned_cols=82 Identities=24% Similarity=0.328 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCce----eeccChhhHHHHHHHHC-
Q 027106 36 PKKGEKVFVSAASG-SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDDA----FNYKEETDLKAALKRYF- 105 (228)
Q Consensus 36 ~~~g~~VlI~ga~g-~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~~----~~~~~~~~~~~~~~~~~- 105 (228)
+.+++++||+||+| ++|.++++.+...|++|+++++++++.+...++ +|...+ .|..+.++....+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999986 899999999999999999999887766554322 343222 24444323333333221
Q ss_pred -CCCccEEEcCcc
Q 027106 106 -PDGIDIYFDNVG 117 (228)
Q Consensus 106 -~~~~d~vld~~g 117 (228)
.+++|++++++|
T Consensus 94 ~~g~id~li~~ag 106 (262)
T PRK07831 94 RLGRLDVLVNNAG 106 (262)
T ss_pred HcCCCCEEEECCC
Confidence 147899999987
No 199
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.98 E-value=5.1e-05 Score=59.13 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.++||+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+.....+.+... +++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999998889999999999887765554232 221 1 1344444233333332211 369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999887
No 200
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.98 E-value=3.9e-05 Score=59.54 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhCC--CceeeccChhhHHHHHHHHCC--CC
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV----TLLKDKLGF--DDAFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~----~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
-+|+.|||+||.+|+|.+.++-....|+++++++.+.+.. +.++ +.|- ..+.|.++.++......+..+ |.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999988877777899998888765533 3344 3342 345566655454444443333 37
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|+++|++|
T Consensus 115 V~ILVNNAG 123 (300)
T KOG1201|consen 115 VDILVNNAG 123 (300)
T ss_pred ceEEEeccc
Confidence 999999988
No 201
>PRK06128 oxidoreductase; Provisional
Probab=97.98 E-value=0.00011 Score=58.49 Aligned_cols=104 Identities=19% Similarity=0.274 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHHhCCCc---eeeccChhhHHHHHHHHCC--
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVT----LLKDKLGFDD---AFNYKEETDLKAALKRYFP-- 106 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~----~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~-- 106 (228)
.|+++||+||++++|..+++.+...|++|+++.++.+ ..+ .++ ..|... ..|..+.+...+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999888889999988765432 222 222 334321 1344443233333333221
Q ss_pred CCccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106 107 DGIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 107 ~~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
+++|++++++|.. ..+.+++.+.++|+++.++....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 3699999988731 12334455667889998876543
No 202
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.98 E-value=0.00014 Score=56.53 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=66.4
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCCCce--eeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKEK---VTLLKDKLGFDDA--FNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+|+++||+||+ +++|.++++.+...|++|+++.++.+. .+.+.++++.... .|..+.++..+.+.+... +.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999987 489999998888899999998877543 2333324443222 344443344433333322 47
Q ss_pred ccEEEcCcchh---------------H---------------HHHHHHccccCcEEEEEeeec
Q 027106 109 IDIYFDNVGAE---------------M---------------QEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 109 ~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+|++++++|.. . .+.+++.++.+|+++.++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 99999987621 1 133456666678988877644
No 203
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.98 E-value=6.6e-05 Score=58.11 Aligned_cols=80 Identities=18% Similarity=0.273 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCC--CCccE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFP--DGIDI 111 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~--~~~d~ 111 (228)
++.++||+||+|++|..+++.+...|++|+.++++++..+... +..... ..|..+.+++...+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999999888889999999998876555444 432211 2344443233333332211 36899
Q ss_pred EEcCcch
Q 027106 112 YFDNVGA 118 (228)
Q Consensus 112 vld~~g~ 118 (228)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998873
No 204
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=5.3e-05 Score=58.41 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG--FD---DAFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~---~~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+.+++...+.+.. .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999998888889999999999887666543443 11 1234444324433333321 13689
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
+|+.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998874
No 205
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.97 E-value=4.8e-05 Score=58.93 Aligned_cols=81 Identities=20% Similarity=0.209 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
-++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+... ++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999988899999999999887665554333 221 12344443234333333221 36
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|+++.++|
T Consensus 83 ~d~vi~~ag 91 (258)
T PRK07890 83 VDALVNNAF 91 (258)
T ss_pred ccEEEECCc
Confidence 899999886
No 206
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.96 E-value=8.1e-05 Score=59.85 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---D-D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~-~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
++.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++++. . . ..|..+..+....+.+.. .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 477999999999999999988888899999999988877665534431 1 1 134444323333333321 2369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 207
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.96 E-value=5.9e-05 Score=59.25 Aligned_cols=80 Identities=20% Similarity=0.316 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
+|+++||+||+|++|.++++.+...|++|++++++.++.+.+.+++ |... ..|..+.+++...+.+.. .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988889999999998877665543233 3211 234444323333333221 1368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999887
No 208
>PRK05717 oxidoreductase; Validated
Probab=97.95 E-value=7.6e-05 Score=57.83 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
.|.+++|+||+|++|..++..+...|++|++++++.++.+.+.++++.. . ..|..+..+....+.+... +++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999888888999999988776655544245432 1 2344443233333333222 368999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+.++|
T Consensus 89 i~~ag 93 (255)
T PRK05717 89 VCNAA 93 (255)
T ss_pred EECCC
Confidence 99887
No 209
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.95 E-value=6e-05 Score=58.42 Aligned_cols=81 Identities=25% Similarity=0.328 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc--eeeccChhhHHHHHHHHC--CCC
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-DD--AFNYKEETDLKAALKRYF--PDG 108 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~--~~~~~~~~~~~~~~~~~~--~~~ 108 (228)
..+++|+|+||+|++|..+++.+...|++|+++++++++.+.+.+.+ +. .. ..|..+.+++.+.+.+.. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999999999999999998889999999999988776554232 11 11 124433324443333321 137
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 87 ~d~li~~ag 95 (258)
T PRK06949 87 IDILVNNSG 95 (258)
T ss_pred CCEEEECCC
Confidence 899999887
No 210
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.95 E-value=6.9e-05 Score=58.03 Aligned_cols=81 Identities=22% Similarity=0.388 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
+|+++||+||+|++|..+++.+...|++|+++++++++.+.+.+++ |.. . ..|..+.+++...+.+.. .+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999988888999999998877655443232 221 1 124444424433333322 2368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999998873
No 211
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.94 E-value=7e-05 Score=57.99 Aligned_cols=80 Identities=25% Similarity=0.353 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++ +... ..|..+.++....+.+... +++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999888889999999999888766554333 3211 1244443233333333221 379
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 85 d~li~~ag 92 (254)
T PRK07478 85 DIAFNNAG 92 (254)
T ss_pred CEEEECCC
Confidence 99999886
No 212
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.94 E-value=8.7e-06 Score=70.42 Aligned_cols=79 Identities=20% Similarity=0.312 Sum_probs=57.6
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHhCCCceeeccC
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS---------------------KEKVTLLKDKLGFDDAFNYKE 93 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~ 93 (228)
..++|++|+|+|+ |+.|+++++.++..|++|++++.. ..+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 4678999999996 999999999999999999998842 34567777 889866555432
Q ss_pred hhhH-HHHHHHHCCCCccEEEcCcchh
Q 027106 94 ETDL-KAALKRYFPDGIDIYFDNVGAE 119 (228)
Q Consensus 94 ~~~~-~~~~~~~~~~~~d~vld~~g~~ 119 (228)
..+. .+.+ ..++|+||+++|..
T Consensus 211 ~~~~~~~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 211 GEDITLEQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred CCcCCHHHH----HhhCCEEEEeeCCC
Confidence 1121 1111 12699999999863
No 213
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.94 E-value=0.00014 Score=55.40 Aligned_cols=105 Identities=21% Similarity=0.211 Sum_probs=74.6
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 108 (228)
...+..+|++||=.+ +|.|-.+..+++..|- +|++++.++..++.++++...... +..-.. +. +.+. +.+..
T Consensus 45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~-dA-e~LP-f~D~s 119 (238)
T COG2226 45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG-DA-ENLP-FPDNS 119 (238)
T ss_pred HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEe-ch-hhCC-CCCCc
Confidence 344566899999997 7889999999999885 999999999999998865543110 111111 11 1111 22338
Q ss_pred ccEEEcCcch-------hHHHHHHHccccCcEEEEEeeec
Q 027106 109 IDIYFDNVGA-------EMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 109 ~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
||+|..+.|- ..+.++.|.|+|+|+++++....
T Consensus 120 FD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 120 FDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred cCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 9999776662 38899999999999999988654
No 214
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.93 E-value=0.00025 Score=54.95 Aligned_cols=90 Identities=20% Similarity=0.282 Sum_probs=62.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce---eeccChhhHHHHHHHHCCC-Ccc
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDA---FNYKEETDLKAALKRYFPD-GID 110 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~-~~d 110 (228)
+.++++||-.|+ |. |..++.+++ .|+ +|++++.++...+.+++.+....+ +.... .. .||
T Consensus 117 ~~~~~~VLDiGc-Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD 181 (250)
T PRK00517 117 VLPGKTVLDVGC-GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKAD 181 (250)
T ss_pred cCCCCEEEEeCC-cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcC
Confidence 578999999994 54 877776554 566 699999999988888733221111 11110 11 599
Q ss_pred EEEcCcchh----HHHHHHHccccCcEEEEEeee
Q 027106 111 IYFDNVGAE----MQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 111 ~vld~~g~~----~~~~~~~~l~~~G~~v~~g~~ 140 (228)
+|+.+.... .+..+.+.|+++|+++..|..
T Consensus 182 ~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 182 VIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred EEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 998766543 567788999999999998753
No 215
>PRK06194 hypothetical protein; Provisional
Probab=97.92 E-value=8.6e-05 Score=58.56 Aligned_cols=81 Identities=14% Similarity=0.253 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
.+.++||+||+|++|..+++.+...|++|++++++.+..+...+++ +..- ..|..+.+++.+.+.+.. .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3679999999999999999888889999999998876655443233 3211 124443323333333221 1368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999998874
No 216
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00011 Score=57.00 Aligned_cols=79 Identities=20% Similarity=0.237 Sum_probs=54.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeeccChhhHHHHHHHHCC--CCccE
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-----DAFNYKEETDLKAALKRYFP--DGIDI 111 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~--~~~d~ 111 (228)
+.+|||+||+|++|..+++.+...|++|++++++.++.+.+.+++... ...|..+.+++.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999999999999999888888999999999888776655333211 12344443244443333322 35899
Q ss_pred EEcCcc
Q 027106 112 YFDNVG 117 (228)
Q Consensus 112 vld~~g 117 (228)
+++++|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999876
No 217
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.91 E-value=0.00023 Score=52.20 Aligned_cols=92 Identities=24% Similarity=0.251 Sum_probs=63.8
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcch--
Q 027106 42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGA-- 118 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-- 118 (228)
|+|.||+|.+|..+++.+...|.+|+++++++++.+. ..+.+.+ .|..+...+.+.+. ++|+||++.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~-----~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALK-----GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHT-----TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhh-----hcchhhhhhhhhc
Confidence 7999999999999999999999999999999887664 2233221 23333212222222 69999999983
Q ss_pred ---hHHHHHHHccccCc--EEEEEeeec
Q 027106 119 ---EMQEAAIANMNTYG--RVAVCGVIS 141 (228)
Q Consensus 119 ---~~~~~~~~~l~~~G--~~v~~g~~~ 141 (228)
+.....++.++..| +++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 35556666665544 788877644
No 218
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.91 E-value=0.00031 Score=52.74 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=76.8
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceee-ccChhhHHHHHHHHC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFN-YKEETDLKAALKRYF 105 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~~~~~~~~~~~~ 105 (228)
...+.+...+||=.| +++|..++.+|..+. .+++.++.++++.+.+++ +.|.+..+. .... +..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 446677888999998 889999999999886 489999999999888874 456654221 1113 5555555533
Q ss_pred CCCccEEE-cCcch---hHHHHHHHccccCcEEEEEe
Q 027106 106 PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 106 ~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~g 138 (228)
.+.||.|| |+.-. ..++.++++|++||.++.-.
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 45899986 55433 48999999999999998844
No 219
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.91 E-value=8e-05 Score=55.84 Aligned_cols=99 Identities=19% Similarity=0.210 Sum_probs=65.8
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCce-eeccChhhHHHHHHHHC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKD---KLGFDDA-FNYKEETDLKAALKRYF 105 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~~~ 105 (228)
+..++++|++||-.| +|.|..++-+++..|. +|+.++..++-.+.+++ .+|...+ +...+. ..... .
T Consensus 66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~--~ 138 (209)
T PF01135_consen 66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWP--E 138 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTG--G
T ss_pred HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhccc--c
Confidence 667799999999999 7789999999998875 79999988876665553 3455432 222221 11111 1
Q ss_pred CCCccEEEcCcchh-HHHHHHHccccCcEEEEE
Q 027106 106 PDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 106 ~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~ 137 (228)
.++||.|+-+.+-+ .-...++.|++||++|..
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 13799999877754 556788999999999993
No 220
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.89 E-value=7.8e-05 Score=57.66 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=54.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ce--eeccChhhHHHHHHHHCC--CCcc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-DA--FNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
|+++||+|+++++|...++.+...|++|++++++.++.+.+.+++ +.. .. .|..+.+++...+.+... +++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 578999999999999999999999999999998887665554232 211 11 244443234333333221 3689
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++++++|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9999886
No 221
>PLN02253 xanthoxin dehydrogenase
Probab=97.89 E-value=0.00011 Score=57.84 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---D--AFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~--~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
.|+++||+||+|++|.++++.+...|++|++++++++..+.+.++++.. . ..|..+.+...+.+.+... +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999888888999999998776655544344321 1 2344444233333333222 3699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++++++|
T Consensus 97 ~li~~Ag 103 (280)
T PLN02253 97 IMVNNAG 103 (280)
T ss_pred EEEECCC
Confidence 9999886
No 222
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.89 E-value=0.00013 Score=56.28 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD---DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+|.++||+|++|++|..+++.+...|++|+++++++++.+.+.++ .+.. ...|..+.+...+.+..... +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999888999999999887765544322 2332 12343333233333333222 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++|+++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 223
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.89 E-value=9e-05 Score=59.12 Aligned_cols=80 Identities=20% Similarity=0.255 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD-D--AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~~~~~~~--~ 107 (228)
.|.+|+|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. . .+|..+.++....+.+... +
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 6789999999999999999888888999999998877655432222 111 1 2344443234333433322 3
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|++++++|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999887
No 224
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.89 E-value=0.00034 Score=54.41 Aligned_cols=105 Identities=14% Similarity=0.127 Sum_probs=67.0
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHh-CCC---ceeeccChhhHHHHHHHHCC--
Q 027106 38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS---KEKVTLLKDKL-GFD---DAFNYKEETDLKAALKRYFP-- 106 (228)
Q Consensus 38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~---~~~~~~~~~~~-g~~---~~~~~~~~~~~~~~~~~~~~-- 106 (228)
.|++++|+||+ +++|.++++.+...|++|+++.++ .++.+.+.+++ +.. ..+|..+.++....+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 57899999986 799999998888899999988654 34444444344 211 12355444344444443322
Q ss_pred CCccEEEcCcchh---------------H---------------HHHHHHccccCcEEEEEeeecc
Q 027106 107 DGIDIYFDNVGAE---------------M---------------QEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 107 ~~~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
+++|++++++|.. . .+.+++.+.++|+++.++...+
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 4799999887620 0 1234556667899999887543
No 225
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.88 E-value=0.00027 Score=53.29 Aligned_cols=99 Identities=20% Similarity=0.195 Sum_probs=67.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
...++++|++||-.| +|.|..+..+++..+ .+|+.++.+++..+.+++. .|...+- .... +... ...+
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~-~~~g-d~~~---~~~~ 142 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVE-VIVG-DGTL---GYEE 142 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEEC-Cccc---CCCc
Confidence 567889999999999 677888888888775 5999999999888777643 3433221 1111 1110 1112
Q ss_pred -CCccEEEcCcc-hhHHHHHHHccccCcEEEEE
Q 027106 107 -DGIDIYFDNVG-AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 107 -~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~ 137 (228)
+.||+|+-... .......++.|++||+++..
T Consensus 143 ~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 143 NAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 37999875443 35667788999999999884
No 226
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.88 E-value=0.00032 Score=50.90 Aligned_cols=101 Identities=22% Similarity=0.292 Sum_probs=69.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 107 (228)
...++++|+.++=+|+ |.|..++++++.. ..+||+++++++..+..+. +||.+.+....- +..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--
Confidence 4467899999888884 4466667777543 3499999999998877652 588765433221 3333333221
Q ss_pred CccEEEcCcch---hHHHHHHHccccCcEEEEEe
Q 027106 108 GIDIYFDNVGA---EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 108 ~~d~vld~~g~---~~~~~~~~~l~~~G~~v~~g 138 (228)
.+|.+|=--|. ..++.++..|+++|++|.-.
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 58999854443 38899999999999999843
No 227
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.87 E-value=0.00043 Score=51.47 Aligned_cols=79 Identities=24% Similarity=0.259 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCc-eeeccChhhHHHHHHHHCCCCccE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----FDD-AFNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
-++.+++|.|++|++|..++..+...|++|+++.++.++.+.+.+.++ ... ..+..+.++..+.+ .+.|+
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~di 100 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI-----KGADV 100 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH-----hcCCE
Confidence 367899999999999999888888889999999999888776653442 211 12222221222333 24899
Q ss_pred EEcCcchhH
Q 027106 112 YFDNVGAEM 120 (228)
Q Consensus 112 vld~~g~~~ 120 (228)
||.+++...
T Consensus 101 Vi~at~~g~ 109 (194)
T cd01078 101 VFAAGAAGV 109 (194)
T ss_pred EEECCCCCc
Confidence 999887543
No 228
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.86 E-value=0.00011 Score=57.52 Aligned_cols=82 Identities=26% Similarity=0.345 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC------ceeeccChhh---HHHHHHHH
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG---FD------DAFNYKEETD---LKAALKRY 104 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~------~~~~~~~~~~---~~~~~~~~ 104 (228)
-.|+++||+|++.|+|.+.+..+...|++|+.+.+++++.+..+.++. .. ...|..+.++ ..+...+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999988766653322 11 1234433212 22233333
Q ss_pred CCCCccEEEcCcch
Q 027106 105 FPDGIDIYFDNVGA 118 (228)
Q Consensus 105 ~~~~~d~vld~~g~ 118 (228)
..+++|++++++|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 34579999998773
No 229
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00016 Score=54.79 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=55.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDNVGA 118 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 118 (228)
++++|+|++|++|..+++.+...|++|++++++.+..+.++ ..+.. ...|..+.+++...+....++++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47999999999999999888788999999999888777666 55543 22444444233333333333379999988763
No 230
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.86 E-value=0.00011 Score=57.03 Aligned_cols=77 Identities=29% Similarity=0.315 Sum_probs=53.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc--eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD--AFNYKEETDLKAALKRYFP--DGIDIYF 113 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~--~~~d~vl 113 (228)
++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|..+.++..+.+.+... +++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6999999999999999888889999999999887765554333 2211 2344444244444433322 3799999
Q ss_pred cCcc
Q 027106 114 DNVG 117 (228)
Q Consensus 114 d~~g 117 (228)
+++|
T Consensus 82 ~naG 85 (259)
T PRK08340 82 WNAG 85 (259)
T ss_pred ECCC
Confidence 9887
No 231
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00015 Score=55.16 Aligned_cols=76 Identities=13% Similarity=0.201 Sum_probs=54.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
+++|+||++++|...++.+...|++|+.+.+++++.+.+.++.+... ..|..+.+++.+.+.+.. +.+|++++++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 58999999999999999888889999999999888776653555432 235554424444444332 25899998764
No 232
>PRK08643 acetoin reductase; Validated
Probab=97.86 E-value=0.00011 Score=56.92 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=54.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
++++||+||+|++|...++.+...|++|+++++++++.+.+.+++ +... ..|..+.+.....+.+... +++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999998889999999998887665554232 2211 1344444233333333221 3699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+++.++|
T Consensus 82 ~vi~~ag 88 (256)
T PRK08643 82 VVVNNAG 88 (256)
T ss_pred EEEECCC
Confidence 9999886
No 233
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00012 Score=55.77 Aligned_cols=80 Identities=9% Similarity=0.130 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--C-C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--D-G 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~-~ 108 (228)
+|.+++|+|+++++|.+.+..+...|++|+++.+++++.+.+.++ .+... ..|..+.++..+.+.+... + .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999988888999999999988876655422 24321 1233333233333333221 3 6
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999886
No 234
>PRK08589 short chain dehydrogenase; Validated
Probab=97.85 E-value=0.0001 Score=57.74 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+|+++||+||++++|.+.++.+...|++|++++++ ++.+.+.+++ +.. ..+|..+.++....+.+... +++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 57899999999999999998888899999999988 4443332233 221 12344443233333333321 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 84 d~li~~Ag 91 (272)
T PRK08589 84 DVLFNNAG 91 (272)
T ss_pred CEEEECCC
Confidence 99999876
No 235
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.85 E-value=0.00044 Score=57.60 Aligned_cols=76 Identities=26% Similarity=0.343 Sum_probs=55.6
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106 34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIY 112 (228)
Q Consensus 34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 112 (228)
.+..+|++|+|+|+ |.+|..+++.++..| .+|+++.++.++.+.+.+++|... ++.. +..+.+. ++|+|
T Consensus 175 ~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-i~~~---~l~~~l~-----~aDvV 244 (417)
T TIGR01035 175 FGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-VKFE---DLEEYLA-----EADIV 244 (417)
T ss_pred hCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-eeHH---HHHHHHh-----hCCEE
Confidence 44567899999995 999999999999999 489999999887664443777532 2221 3333332 58999
Q ss_pred EcCcchh
Q 027106 113 FDNVGAE 119 (228)
Q Consensus 113 ld~~g~~ 119 (228)
|+|++.+
T Consensus 245 i~aT~s~ 251 (417)
T TIGR01035 245 ISSTGAP 251 (417)
T ss_pred EECCCCC
Confidence 9999863
No 236
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00012 Score=56.43 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
.+.+++|+|++|++|..+++.+...|++|++++++++..+.+.+++ +.. ...|..+.+.....+.+... +++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5679999999999999999888889999999998876654443232 211 12344433233332222211 369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++|+++|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 237
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.85 E-value=0.00012 Score=53.60 Aligned_cols=89 Identities=21% Similarity=0.281 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
-.|.+|.|+| .|.+|..++++++.+|++|++.+++....+... ..+.. .. ++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence 4689999999 599999999999999999999998877655344 44431 11 33334443 69998877
Q ss_pred ch-h-----HHHHHHHccccCcEEEEEee
Q 027106 117 GA-E-----MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 117 g~-~-----~~~~~~~~l~~~G~~v~~g~ 139 (228)
+. + .-...+..|+++..+|.++.
T Consensus 100 plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred ccccccceeeeeeeeeccccceEEEeccc
Confidence 63 2 44667899999999999864
No 238
>PRK09242 tropinone reductase; Provisional
Probab=97.84 E-value=0.00012 Score=56.71 Aligned_cols=81 Identities=22% Similarity=0.315 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCc---eeeccChhhHHHHHHHHC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFDD---AFNYKEETDLKAALKRYF--PD 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~~~~~~--~~ 107 (228)
.|+++||+|++|++|..+++.+...|++|++++++.++.+.+.+++ +... ..|..+.++....+.+.. -+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999998889999999999887766554332 2111 124443323333333221 13
Q ss_pred CccEEEcCcch
Q 027106 108 GIDIYFDNVGA 118 (228)
Q Consensus 108 ~~d~vld~~g~ 118 (228)
++|+++.++|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 239
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.84 E-value=0.00013 Score=56.25 Aligned_cols=79 Identities=22% Similarity=0.291 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
.|+++||+||+|++|..+++.+...|++|++++++... .+.++ +.+.. ...|..+.+++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999998888899999999976521 22233 34421 12344443244433333221 3699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++++++|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9999876
No 240
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.83 E-value=0.00016 Score=56.75 Aligned_cols=80 Identities=13% Similarity=0.181 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKV---TLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~---~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+|+++||+||++ ++|.+.++.+...|++|+++.++++.. +.+.++.|... ..|..+.++....+.+... +.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999986 999999998888999999988765322 22222345322 2355544344444433322 47
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999887
No 241
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.83 E-value=0.00015 Score=56.29 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC--CCCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF--PDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~v 112 (228)
.+.++||+|++|++|...++.+...|++|++++++.++.+.+.++.+.. . ..|..+.++....+.+.. .+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3679999999999999999998889999999999988776665444421 1 123333323333333321 1368999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+.++|
T Consensus 85 i~~ag 89 (257)
T PRK07067 85 FNNAA 89 (257)
T ss_pred EECCC
Confidence 98876
No 242
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00016 Score=55.94 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=52.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCCCCccEE
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFPDGIDIY 112 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~v 112 (228)
+.++||+||+|++|..+++.+...|++|+++++++.+.+.+.+. .+.. . ..|..+. + .+.+...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-I---DRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-H---HHHHHhcCCCCEE
Confidence 46899999999999999999999999999999887766555422 2221 1 1344433 1 2222223479999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
|+++|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99887
No 243
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.82 E-value=0.0004 Score=55.58 Aligned_cols=100 Identities=23% Similarity=0.258 Sum_probs=70.0
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
+...++++++||..|+ |.|..++.+++..+. .|++++.+++..+.+++ +.|.+.+.... . +..+.... .
T Consensus 74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-g-D~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-G-DGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C-Chhhcccc--c
Confidence 4567889999999994 469999999998764 79999999987776663 35654433222 1 32222211 1
Q ss_pred CCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106 107 DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 107 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~ 137 (228)
+.+|+|+.+.+. ......++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 369999988775 3555678999999998873
No 244
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.82 E-value=0.00023 Score=55.35 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=64.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC-
Q 027106 38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS------KEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP- 106 (228)
Q Consensus 38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~------~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~- 106 (228)
.|++++|+||+ +++|.++++.+...|++|+++.++ ++..+.+.++.+... ..|..+.++..+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 57899999985 799999998888899999887533 222333331222111 2355544344433333322
Q ss_pred -CCccEEEcCcchh---------------H---------------HHHHHHccccCcEEEEEeeecc
Q 027106 107 -DGIDIYFDNVGAE---------------M---------------QEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 107 -~~~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
+++|++++++|.. . .+.+++.++.+|+++.++...+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 4799999988721 0 1335566777899998876543
No 245
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00024 Score=55.35 Aligned_cols=81 Identities=23% Similarity=0.351 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-Cc--eeeccChhhHHHHHHHHC-CCCccE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--GF-DD--AFNYKEETDLKAALKRYF-PDGIDI 111 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~--~~~~~~~~~~~~~~~~~~-~~~~d~ 111 (228)
++.++||+||+|++|...++.+...|++|+++++++++.+.+..++ +. .. ..|..+.+...+.+.... .+++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4679999999999999999888889999999999988776665343 11 11 123333323222222221 247899
Q ss_pred EEcCcch
Q 027106 112 YFDNVGA 118 (228)
Q Consensus 112 vld~~g~ 118 (228)
+++++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998774
No 246
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00017 Score=56.54 Aligned_cols=78 Identities=21% Similarity=0.288 Sum_probs=54.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF--PDGIDIYFD 114 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~vld 114 (228)
.++||+||+|++|..+++.+...|.+|+++.+++++.+.+++..+.. . ..|..+.+.+.+.+.+.. .+++|++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999999999999888888999999999988777666333321 1 234444323333333322 136899999
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 83 ~ag 85 (276)
T PRK06482 83 NAG 85 (276)
T ss_pred CCC
Confidence 886
No 247
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.82 E-value=0.00017 Score=55.68 Aligned_cols=77 Identities=22% Similarity=0.358 Sum_probs=54.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIYFDN 115 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~vld~ 115 (228)
+|+|+||+|++|.+.+..+...|++|+++++++++.+.+.+.++... ..|..+.+++...+.+... +++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999988899999999999887776653454321 1244443233333333222 369999988
Q ss_pred cc
Q 027106 116 VG 117 (228)
Q Consensus 116 ~g 117 (228)
+|
T Consensus 82 ag 83 (248)
T PRK10538 82 AG 83 (248)
T ss_pred CC
Confidence 76
No 248
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.81 E-value=0.00016 Score=55.90 Aligned_cols=80 Identities=21% Similarity=0.427 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
.++++||+||++++|..+++.+...|++|+++++++++.+.+.+++ +.. . ..|..+.+.+...+.+.. .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999888889999999998877665543233 221 1 134444323333333221 1369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 88 d~vi~~ag 95 (254)
T PRK08085 88 DVLINNAG 95 (254)
T ss_pred CEEEECCC
Confidence 99999887
No 249
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00018 Score=55.78 Aligned_cols=83 Identities=11% Similarity=0.132 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHH---hCCC--ce--eeccChhhHHHHHHHHCC
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEK-VTLLKDK---LGFD--DA--FNYKEETDLKAALKRYFP 106 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~-~~~~~~~---~g~~--~~--~~~~~~~~~~~~~~~~~~ 106 (228)
+..+.+|||+||+|++|..+++.+... |++|+++++++++ .+.+.++ .+.. .+ +|..+..+..+.+.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999999999999999876666 4899999987764 4433222 2321 11 344443233333333322
Q ss_pred -CCccEEEcCcch
Q 027106 107 -DGIDIYFDNVGA 118 (228)
Q Consensus 107 -~~~d~vld~~g~ 118 (228)
+++|++++++|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 479999887753
No 250
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00017 Score=55.49 Aligned_cols=79 Identities=19% Similarity=0.307 Sum_probs=53.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD-D--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+.++||+||+|++|..+++.+...|++|+++++++++.+.+...+ +.. . ..|..+.+++...+.+... ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999988888788999999999887765554222 211 1 1344444244444443322 36
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999886
No 251
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00013 Score=56.25 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC-c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--GFD-D--AFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
++.+++|+||+|++|..+++.+...|++|+.+.++.++.+...++. +.. . ..|..+.+...+.+.+... +++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999999888888999999998877665544233 221 1 1244443233333333221 3799
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 252
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=0.00018 Score=56.45 Aligned_cols=107 Identities=13% Similarity=0.135 Sum_probs=68.2
Q ss_pred CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC-
Q 027106 35 KPKKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSK---EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP- 106 (228)
Q Consensus 35 ~~~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~- 106 (228)
++-.|+++||+||+ +++|.+.++.+...|++|+.+.+++ ++.+.+.++++... ..|..+.++....+.+...
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 34467899999986 7999999988888999999887653 33444443455321 2344444344444433322
Q ss_pred -CCccEEEcCcchh---------------HH---------------HHHHHccccCcEEEEEeeec
Q 027106 107 -DGIDIYFDNVGAE---------------MQ---------------EAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 107 -~~~d~vld~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~ 141 (228)
+++|++++++|.. .+ +.+++.++.+|+++.++...
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 3799999987621 11 22345666679998887654
No 253
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.79 E-value=0.00018 Score=55.82 Aligned_cols=80 Identities=25% Similarity=0.343 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+...+.+... +++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999888889999999999887766554232 221 12344443233332322211 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|+++.++|
T Consensus 91 d~vi~~ag 98 (259)
T PRK08213 91 DILVNNAG 98 (259)
T ss_pred CEEEECCC
Confidence 99999886
No 254
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.79 E-value=0.00018 Score=55.00 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=52.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFD 114 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld 114 (228)
++++||+||++++|..+++.+...|++|+++++++++. +.++ ..|... ..|..+.++....+.+... +++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 56899999999999999998888999999999876543 3333 445321 2344433233333333322 36999999
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 887
No 255
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.79 E-value=0.00025 Score=56.81 Aligned_cols=79 Identities=15% Similarity=0.201 Sum_probs=54.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--C--c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF--D--D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--~--~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
+.+++|+||++++|.++++.+...| ++|++++++.++.+.+.++++. . . ..|..+..+....+.+.. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6799999999999999998888889 8999999988877665545432 1 1 134444423333333332 2379
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 83 D~lI~nAG 90 (314)
T TIGR01289 83 DALVCNAA 90 (314)
T ss_pred CEEEECCC
Confidence 99999876
No 256
>PRK07985 oxidoreductase; Provisional
Probab=97.79 E-value=0.00031 Score=55.80 Aligned_cols=105 Identities=17% Similarity=0.148 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~~--~ 107 (228)
+++++||+||++++|.++++.+...|++|+++.++. +..+.+.+ +.|.. ...|..+.++....+.+... +
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 567999999999999999998888999999876432 23333321 23321 12344443233333333322 3
Q ss_pred CccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106 108 GIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 108 ~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
++|++++++|.. ..+.+++.++.+|+++.++....
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 689999887621 11234455566789999876543
No 257
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.79 E-value=6.6e-05 Score=58.66 Aligned_cols=78 Identities=18% Similarity=0.362 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld 114 (228)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.. .+... ..|..+.+++...+..... +++|++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 356899999999999999988888899999999887654322 12221 2355544344444443322 36999999
Q ss_pred Ccch
Q 027106 115 NVGA 118 (228)
Q Consensus 115 ~~g~ 118 (228)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9873
No 258
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=0.00021 Score=55.60 Aligned_cols=80 Identities=15% Similarity=0.259 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
.|++++|+||++ ++|.+.++.+...|++|+.+.+++. ..+.+.++.|... .+|..+.++....+.+... +.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999986 8999999888888999998887642 2222322334322 2455554344444443322 46
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999876
No 259
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.78 E-value=0.00023 Score=55.04 Aligned_cols=80 Identities=24% Similarity=0.311 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
++.+|||+|++|++|...++.+...|.+|+++++++++.+.+..++ +.. ...|..+.+++...+.+.. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999888888999999999887765543232 321 1234444323333333222 1369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|+++.+++
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99998886
No 260
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00019 Score=56.38 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC---Cc--eeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGF---DD--AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~--~~~~~~~~~~~~~~~~~~~--~ 107 (228)
.+.++||+||+|++|...+..+...|++|++++++++..+.+.+. .+. .. ..|..+.+++.. +.+... +
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 357899999999999999988888899999999887766554322 221 11 235554434443 433322 3
Q ss_pred CccEEEcCcch
Q 027106 108 GIDIYFDNVGA 118 (228)
Q Consensus 108 ~~d~vld~~g~ 118 (228)
++|+++.++|.
T Consensus 81 ~id~vv~~ag~ 91 (280)
T PRK06914 81 RIDLLVNNAGY 91 (280)
T ss_pred CeeEEEECCcc
Confidence 68999998763
No 261
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00016 Score=55.91 Aligned_cols=80 Identities=18% Similarity=0.198 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
++.+++|+||+|++|..+++.+...|++|+.+++++++.+.+.+. .+.. . ..|..+.+++...+.+.. .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999988888899999999988765544322 2321 1 134443323333333221 1368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 86 d~li~~ag 93 (253)
T PRK06172 86 DYAFNNAG 93 (253)
T ss_pred CEEEECCC
Confidence 99999876
No 262
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00021 Score=56.01 Aligned_cols=80 Identities=24% Similarity=0.235 Sum_probs=54.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC--CCCccEEE
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF--PDGIDIYF 113 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~vl 113 (228)
+.+|||+||+|++|..+++.+...|.+|++++++.++.+.+.+.++.. . ..|..+.+++...+.+.. -+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 568999999999999999888888999999999888776665343321 1 134443323333333321 13689999
Q ss_pred cCcch
Q 027106 114 DNVGA 118 (228)
Q Consensus 114 d~~g~ 118 (228)
.++|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99873
No 263
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00019 Score=55.48 Aligned_cols=80 Identities=20% Similarity=0.295 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+++ +.. . ..|..+.++....+.+... +.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999998889999999998877665544332 221 1 1244433233333333221 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 87 d~li~~ag 94 (252)
T PRK07035 87 DILVNNAA 94 (252)
T ss_pred CEEEECCC
Confidence 99998886
No 264
>PRK06720 hypothetical protein; Provisional
Probab=97.77 E-value=0.00022 Score=51.73 Aligned_cols=80 Identities=16% Similarity=0.271 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
+|.+++|+||++++|...+..+...|++|++++++.+..+...+++ +... ..|..+.+++.+.+.+.. .+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999888888999999998876654432232 3221 123333223333322211 1468
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 99998887
No 265
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.0002 Score=54.88 Aligned_cols=82 Identities=15% Similarity=0.253 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
..++++||+|++|++|..++..+...|.+|+++++++++.+.+.+++ +.. . ..|..+.++....+.+... ++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45679999999999999999998889999999999887665554222 211 1 2344443233333333221 36
Q ss_pred ccEEEcCcch
Q 027106 109 IDIYFDNVGA 118 (228)
Q Consensus 109 ~d~vld~~g~ 118 (228)
+|++++++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 266
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.76 E-value=0.00019 Score=54.97 Aligned_cols=81 Identities=20% Similarity=0.316 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
.+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +... ..|..+..++...+++... +++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999999999999999888889999999999877655443222 2211 1233333244444443321 368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998763
No 267
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00024 Score=55.64 Aligned_cols=80 Identities=11% Similarity=0.124 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCc--e--eeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----FDD--A--FNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~~--~--~~~~~~~~~~~~~~~~~~--~ 107 (228)
++.++||+|++|++|..+++.+...|++|+++++++++.+...+++. ... + .|..+.++....+.+... +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999988776544432321 111 1 244333233333333322 3
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|+++.++|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999886
No 268
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00015 Score=55.52 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C-c--eeeccC---h--hhHHHHHHHHC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-D-D--AFNYKE---E--TDLKAALKRYF 105 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~-~--~~~~~~---~--~~~~~~~~~~~ 105 (228)
++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+++ +. . . ..|..+ . ..+...+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999888889999999999988766554332 21 1 1 123221 1 12233343333
Q ss_pred CCCccEEEcCcc
Q 027106 106 PDGIDIYFDNVG 117 (228)
Q Consensus 106 ~~~~d~vld~~g 117 (228)
.+.+|++++++|
T Consensus 85 ~~~id~vi~~ag 96 (239)
T PRK08703 85 QGKLDGIVHCAG 96 (239)
T ss_pred CCCCCEEEEecc
Confidence 246899999887
No 269
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00031 Score=54.46 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=53.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
+.++||+||+|++|...+..+...|++|++++++.++.+.+.+++.... ..|..+.+.+...+.+... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999999999999998888889999999998887665553432111 2344443233333333221 368999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+.+.|
T Consensus 82 i~~ag 86 (257)
T PRK07074 82 VANAG 86 (257)
T ss_pred EECCC
Confidence 99886
No 270
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.75 E-value=0.00021 Score=55.31 Aligned_cols=79 Identities=16% Similarity=0.264 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLGFDD---AFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+|+++||+||++++|.++++.+...|++|+++.++... .+.++ +.+... ..|..+.++....+.+.. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999888899999988765422 12233 344321 235444434444443322 13699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++++++|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999887
No 271
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00019 Score=55.82 Aligned_cols=80 Identities=21% Similarity=0.341 Sum_probs=53.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
+.+|||+||+|++|..+++.+...|++|+++++++.+.+.+.+.+ +... ..|..+.+.+...+.+... +++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 358999999999999999988889999999999877655443222 3211 1244443233333333321 3689
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
++++++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999863
No 272
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.73 E-value=0.00024 Score=55.73 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..+....+.+... +++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988889999999998877655443232 321 1 1344433233333333221 379
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999887
No 273
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.73 E-value=0.00023 Score=55.26 Aligned_cols=81 Identities=19% Similarity=0.277 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
++.++||+|++|++|..+++.+...|++|+++++++++.+.+.++ .+... ..|..+.....+.+.+.. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998889999999999988665444323 33321 124444323333332221 1368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998863
No 274
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.73 E-value=5.9e-05 Score=63.51 Aligned_cols=95 Identities=18% Similarity=0.194 Sum_probs=64.8
Q ss_pred hcCCCCCCEEE----EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCC
Q 027106 33 IGKPKKGEKVF----VSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 33 ~~~~~~g~~Vl----I~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 107 (228)
+.++++|+++| |+||+|++|.+++|+++..|++|+.+.+.+.+....+ ..+.. .++|.+.. .+.+.+...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~--- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKAL--- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHH---
Confidence 46678999998 9999999999999999999999999876655333222 23333 34444433 222232221
Q ss_pred CccEEEcCcchhHHHHHHHccccCcEEEEEeeecc
Q 027106 108 GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 108 ~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
...++..++.|.++|+++.++....
T Consensus 103 ----------~~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 103 ----------YEFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred ----------HHHHHHHHHhccCCCEEEEEccccc
Confidence 1355677888889999999886543
No 275
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00074 Score=51.82 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC-ce--eeccChhhHHHHHHHHC--CCC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKD---KLGFD-DA--FNYKEETDLKAALKRYF--PDG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~---~~g~~-~~--~~~~~~~~~~~~~~~~~--~~~ 108 (228)
++.++||+|++|++|..+++.+...|++|+.+.++. ...+.+.+ ..+.. .. .|..+.++....+.+.. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 567999999999999999999999999988776543 22222221 23321 11 23333323333333221 136
Q ss_pred ccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106 109 IDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 109 ~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+|+++.++|.. ..+.+++.++.+|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 89999988731 1223445556678999987644
No 276
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.72 E-value=0.00049 Score=51.66 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=66.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
+...++++++||-.| .|.|..++.+++..+ .+|+.++.+++..+.+++. .+....+..... +..+.+. ..
T Consensus 66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~--~~ 140 (205)
T PRK13944 66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLE--KH 140 (205)
T ss_pred HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCc--cC
Confidence 556788999999999 567888888888764 5999999998877776633 343211111111 2111111 12
Q ss_pred CCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106 107 DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 107 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~ 137 (228)
+.||+|+-+... .....+.+.|++||+++..
T Consensus 141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 379998866553 4556778999999999874
No 277
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.72 E-value=0.00032 Score=53.98 Aligned_cols=81 Identities=27% Similarity=0.363 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHH-HHHH--HhCCCce---eeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVT-LLKD--KLGFDDA---FNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~-~~~~--~~g~~~~---~~~~~~~~~~~~~~~~~~--~~ 108 (228)
++.++||+|++|++|..+++.+...|++|++..+ +..+.+ .+.+ ..+.... .|..+.++....+.+... ++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999889998887543 333222 2220 2343221 344443233333333221 37
Q ss_pred ccEEEcCcch
Q 027106 109 IDIYFDNVGA 118 (228)
Q Consensus 109 ~d~vld~~g~ 118 (228)
+|++++++|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 278
>PRK06398 aldose dehydrogenase; Validated
Probab=97.72 E-value=6.8e-05 Score=58.28 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP--DGIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vld~ 115 (228)
+|+++||+||++++|.+.+..+...|++|+++++++.+...+. ....|..+..++.+.+.+... +++|+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4789999999999999999999999999999987754321110 112344443244333433322 369999998
Q ss_pred cc
Q 027106 116 VG 117 (228)
Q Consensus 116 ~g 117 (228)
+|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 76
No 279
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.72 E-value=0.00043 Score=57.38 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=56.8
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
...+--.|.+|||.|+ |++|.+++..+...|+ +++++.++.++.+.+.++++...+...+ +..+.+ ..+|
T Consensus 174 ~~~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l-----~~aD 244 (414)
T PRK13940 174 RQLDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLI-----KKAD 244 (414)
T ss_pred HHhcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHh-----ccCC
Confidence 3344456789999995 9999999999998997 8999999988887777567622222221 222222 2489
Q ss_pred EEEcCcchh
Q 027106 111 IYFDNVGAE 119 (228)
Q Consensus 111 ~vld~~g~~ 119 (228)
+||+|++.+
T Consensus 245 iVI~aT~a~ 253 (414)
T PRK13940 245 IIIAAVNVL 253 (414)
T ss_pred EEEECcCCC
Confidence 999999975
No 280
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00025 Score=55.06 Aligned_cols=78 Identities=22% Similarity=0.350 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ce--eeccChhhHHHHHHHHCCCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD-DA--FNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~~~d 110 (228)
++.+++|+|+++++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|..+.+++...+... +++|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4789999999999999999988889999999999887766544233 221 11 2444432333333322 4699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+++++.|
T Consensus 84 ~lv~~ag 90 (259)
T PRK06125 84 ILVNNAG 90 (259)
T ss_pred EEEECCC
Confidence 9999876
No 281
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00022 Score=55.29 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHCC--C
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~~--~ 107 (228)
-++.+++|+|++|++|..+++.+...|++ |++++++.++.+...+ +.+.. ..+|..+.+.+.+.+..... +
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999899997 9999988765543321 23332 12344444233333332211 3
Q ss_pred CccEEEcCcch
Q 027106 108 GIDIYFDNVGA 118 (228)
Q Consensus 108 ~~d~vld~~g~ 118 (228)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999873
No 282
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00019 Score=55.62 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC---ceeeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD--KLGFD---DAFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
+|.++||+||+|++|..+++.+...|++|+++++++++.+..++ +.+.. ...|..+.+++...+.+... +++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 46799999999999999998888899999999988776544331 22321 12344443233333333222 3799
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+++.++|
T Consensus 86 ~vi~~ag 92 (258)
T PRK08628 86 GLVNNAG 92 (258)
T ss_pred EEEECCc
Confidence 9999987
No 283
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00027 Score=55.83 Aligned_cols=82 Identities=18% Similarity=0.226 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHh---CCCc---eeeccChhhHHHHH
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK---------EKVTLLKDKL---GFDD---AFNYKEETDLKAAL 101 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~---------~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~ 101 (228)
-+|.++||+||++++|.+.++.+...|++|++++++. ++.+.+.+++ |... ..|..+.++..+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4678999999999999999988888999999887654 4333332232 3211 13444432444434
Q ss_pred HHHCC--CCccEEEcCcch
Q 027106 102 KRYFP--DGIDIYFDNVGA 118 (228)
Q Consensus 102 ~~~~~--~~~d~vld~~g~ 118 (228)
.+... +++|++++++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 33321 479999998873
No 284
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.69 E-value=0.00036 Score=53.47 Aligned_cols=81 Identities=22% Similarity=0.352 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-e--eeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD-A--FNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.+|||+|++|++|...++.+...|.+|+++.+++++.+.+.+. .+... + .|..+.+.+...+.+... +++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999988888899999999988765544322 23211 1 344443233333333211 368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|+++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998754
No 285
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.69 E-value=0.00035 Score=53.62 Aligned_cols=80 Identities=28% Similarity=0.407 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
++.++||+||+|++|..+++.+...|+.|+...++.++.+.+....+.. . ..|..+.+.+...+.+... +++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999999999999999888889999988888877766554344431 1 1233333233333322211 369999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+.++|
T Consensus 85 i~~ag 89 (245)
T PRK12936 85 VNNAG 89 (245)
T ss_pred EECCC
Confidence 99887
No 286
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.69 E-value=0.00029 Score=51.14 Aligned_cols=104 Identities=20% Similarity=0.173 Sum_probs=68.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec-cC---------------hhhHHHHHH
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-KE---------------ETDLKAALK 102 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~-~~---------------~~~~~~~~~ 102 (228)
..+|+|.|+ |.+|.-|+.+++.+|++|+..+..+++.+... ..+...+... .+ .......+.
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 368999995 99999999999999999999999998888777 6665333221 00 012222333
Q ss_pred HHCCCCccEEEcCcc--h---h--HHHHHHHccccCcEEEEEeeecccCC
Q 027106 103 RYFPDGIDIYFDNVG--A---E--MQEAAIANMNTYGRVAVCGVISEYTD 145 (228)
Q Consensus 103 ~~~~~~~d~vld~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~ 145 (228)
+... .+|+++.+.- + + .-.+.++.|+++..++.++...++++
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG~i 146 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGGSI 146 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-SB
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCCCc
Confidence 2211 3788885321 1 1 44677889999999999987766654
No 287
>PLN02476 O-methyltransferase
Probab=97.69 E-value=0.0011 Score=51.75 Aligned_cols=105 Identities=15% Similarity=0.094 Sum_probs=72.9
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106 30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~ 104 (228)
+....+..+.++||=.| +++|..++.+|+.++ .+|+.++.+++..+.+++ +.|..+-+..... +..+.+.++
T Consensus 110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l 186 (278)
T PLN02476 110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSM 186 (278)
T ss_pred HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence 33456677889999999 788999999998774 479999999988877763 3566433333222 444444433
Q ss_pred C----CCCccEEE-cCcch---hHHHHHHHccccCcEEEEE
Q 027106 105 F----PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 105 ~----~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~ 137 (228)
. .+.||.|| |+.-. ..+..++++|++||.++.=
T Consensus 187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 1 23799976 44332 3788899999999998873
No 288
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.69 E-value=0.00076 Score=51.31 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=72.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
...++.+|++|+=.| .|.|.+++-+|+..|. +|+..+..++..+.+++. +|....+..... |..+.+. +
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~---~ 161 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGID---E 161 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccc---c
Confidence 568899999998877 6778899999998876 999999999988887743 454432222222 3322221 1
Q ss_pred CCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106 107 DGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 107 ~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g 138 (228)
..||.||--... ..++.+.+.|++||.++.+.
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 268987644443 59999999999999999975
No 289
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.69 E-value=0.00031 Score=56.01 Aligned_cols=105 Identities=15% Similarity=0.247 Sum_probs=71.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc----eeeccChhhHHHHHHHHC--C
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DD----AFNYKEETDLKAALKRYF--P 106 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~----~~~~~~~~~~~~~~~~~~--~ 106 (228)
-.|.+++|+|+++|+|..++.-+...|++|+..+++.++.+.+++++.. .. .+|-++..+......++. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 4668999999999999999999999999999999999877777655442 22 234444323333333332 2
Q ss_pred CCccEEEcCcchh------------------------HHHHHHHccccC--cEEEEEeeec
Q 027106 107 DGIDIYFDNVGAE------------------------MQEAAIANMNTY--GRVAVCGVIS 141 (228)
Q Consensus 107 ~~~d~vld~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~~ 141 (228)
.+.|+.++++|-- ....+++.|+.. +|+|.+++..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 3789999887721 224455666654 8999988644
No 290
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.68 E-value=0.00038 Score=54.45 Aligned_cols=86 Identities=21% Similarity=0.218 Sum_probs=61.3
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee--------ccChhhHHHHHHHH
Q 027106 33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN--------YKEETDLKAALKRY 104 (228)
Q Consensus 33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~~~~~~~~~~ 104 (228)
+.+.++...|+|+|++.|+|++.+..++..|++|.++.++.+++..++..++....+. ..+.+.....+.+.
T Consensus 27 ~~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 27 IVKPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred hcccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 3445566799999999999999999999999999999999999988876666532211 11111122333333
Q ss_pred C--CCCccEEEcCcch
Q 027106 105 F--PDGIDIYFDNVGA 118 (228)
Q Consensus 105 ~--~~~~d~vld~~g~ 118 (228)
. .+.+|.+|+|+|.
T Consensus 107 ~~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGV 122 (331)
T ss_pred hhccCCcceEEEecCc
Confidence 1 2478999999984
No 291
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.68 E-value=0.00029 Score=54.73 Aligned_cols=80 Identities=20% Similarity=0.280 Sum_probs=52.8
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
.+++++|+|+ ++++|.+.++.+...|++|++++++. +..+.+.++++.. ...|..+.++..+.+.+... ++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 79999999988888999999988653 3344444344431 12344444234333333221 47
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 86 iD~li~nAG 94 (256)
T PRK07889 86 LDGVVHSIG 94 (256)
T ss_pred CcEEEEccc
Confidence 999999876
No 292
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.67 E-value=0.00023 Score=55.25 Aligned_cols=79 Identities=15% Similarity=0.181 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
.|.++||+||++++|.+.++.+...|++|++++++ ++.+.+.+ +.+.. ...|..+.+.....+.+.. .+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999988899999999876 33333321 23321 1234444423333333322 1368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 93 d~li~~ag 100 (258)
T PRK06935 93 DILVNNAG 100 (258)
T ss_pred CEEEECCC
Confidence 99999876
No 293
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00024 Score=54.94 Aligned_cols=75 Identities=17% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ceeeccChhhHHHHHHHHC--CCCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--D-DAFNYKEETDLKAALKRYF--PDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~--~~~~d~v 112 (228)
.|+++||+||+|++|..+++.+...|++|+++++++++ . ..+. . ...|..+.++..+.+.... .+++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999888899999999987654 1 2222 1 1234444323433333322 1368999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
|.++|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99886
No 294
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00031 Score=54.41 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~ 108 (228)
+|.++||+|+++++|.++++.+...|++|++++++.+ ..+.+.++ .+.. . ..|..+.++..+.+.+.. .++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5779999999999999999988889999999987643 22222212 2321 1 124444323433333322 146
Q ss_pred ccEEEcCcch
Q 027106 109 IDIYFDNVGA 118 (228)
Q Consensus 109 ~d~vld~~g~ 118 (228)
+|++++++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 295
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.65 E-value=0.00036 Score=53.99 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+|.+++|+||++++|..+++.+...|++|+++++++++.+.+.++ .+.. . ..|..+.+++...+.+... +++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 588999999999999999988888899999999987765544322 2321 1 2244443233333333221 368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|+++.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999988773
No 296
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00042 Score=53.49 Aligned_cols=74 Identities=20% Similarity=0.363 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
.|++++|+||+|++|..+++.+...|++|+++++++ +..+... .+... ..|..+. + .+.+.. +++|++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~-~---~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE-E---SLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH-H---HHHHhc-CCCCEEEE
Confidence 468999999999999999998888999999998776 2222211 11112 2344332 1 222222 36999999
Q ss_pred Ccch
Q 027106 115 NVGA 118 (228)
Q Consensus 115 ~~g~ 118 (228)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9873
No 297
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.65 E-value=0.00094 Score=49.27 Aligned_cols=97 Identities=15% Similarity=0.170 Sum_probs=63.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
.++++.+||-.| .|.|..++.+++.. +++|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.||
T Consensus 42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence 356689999999 45566666666544 5799999999887776653 344433 222221 2222 111 23799
Q ss_pred EEEcCcch---hHHHHHHHccccCcEEEEEe
Q 027106 111 IYFDNVGA---EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 111 ~vld~~g~---~~~~~~~~~l~~~G~~v~~g 138 (228)
+|+..... ..+..+.+.|+++|+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 99864332 47788899999999999874
No 298
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.65 E-value=0.00031 Score=54.69 Aligned_cols=80 Identities=11% Similarity=0.199 Sum_probs=50.8
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK---DKLGFDD--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+|+++||+|| ++++|.+.++.+...|++|+++.+++...+.++ ++.|... ..|..+.++....+.+... ++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 579999999888889999998765533222222 1233211 2344444344434433322 47
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 85 iD~lVnnAG 93 (261)
T PRK08690 85 LDGLVHSIG 93 (261)
T ss_pred CcEEEECCc
Confidence 999999886
No 299
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.65 E-value=0.00041 Score=54.91 Aligned_cols=96 Identities=22% Similarity=0.194 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccE
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
..+|++||-.|+ |. |..++.+++ .|+ +|++++.++...+.+++.. +....+..... + ......++||+
T Consensus 157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence 468899999993 44 877777665 465 9999999998888777322 22211111111 1 11122347999
Q ss_pred EEcCcch----hHHHHHHHccccCcEEEEEee
Q 027106 112 YFDNVGA----EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 112 vld~~g~----~~~~~~~~~l~~~G~~v~~g~ 139 (228)
|+.+... ..+..+.+.|+++|.++..|.
T Consensus 229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 9876543 266777899999999999874
No 300
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.65 E-value=0.00038 Score=53.89 Aligned_cols=103 Identities=13% Similarity=0.163 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vl 113 (228)
.|.+++|+||+|++|...++.+...|++|+++.++ ++..+.++ ..+... ..|..+.++..+.+.+... +++|+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999888899999887654 33434444 333322 2344444244444433321 3699999
Q ss_pred cCcchh-----------H---------------HHHHHHccc--cCcEEEEEeeec
Q 027106 114 DNVGAE-----------M---------------QEAAIANMN--TYGRVAVCGVIS 141 (228)
Q Consensus 114 d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~ 141 (228)
+++|.. . .+.+++.+. .+|+++.++...
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~ 140 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNA 140 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHH
Confidence 988631 0 233445554 468999988654
No 301
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00088 Score=51.75 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh---CCCc---eeeccChhhH---HHHHHH----
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDKL---GFDD---AFNYKEETDL---KAALKR---- 103 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~~---g~~~---~~~~~~~~~~---~~~~~~---- 103 (228)
.+.+++|+||++++|.++++.+...|++|+++. ++.++.+.+..++ +... ..|..+.++. .+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 478999999999999999999888999998864 4444443332122 2211 1233222122 222222
Q ss_pred HCC-CCccEEEcCcchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106 104 YFP-DGIDIYFDNVGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 104 ~~~-~~~d~vld~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 142 (228)
..+ +++|++++++|.. .+ +.+++.++..|+++.++...+
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 112 2699999988721 12 234556667799999887654
No 302
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.64 E-value=0.00043 Score=53.34 Aligned_cols=82 Identities=16% Similarity=0.190 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc--e--eecc--ChhhHHHHHHHHCC
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD--A--FNYK--EETDLKAALKRYFP 106 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--~--~~~~--~~~~~~~~~~~~~~ 106 (228)
..++.+|||+|++|++|...++.+...|++|++++++.++.+.+.+++ +... + .+.. +.+++.+.+.....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999999999999999888888999999999887654443232 2211 1 2221 11133333322221
Q ss_pred --CCccEEEcCcc
Q 027106 107 --DGIDIYFDNVG 117 (228)
Q Consensus 107 --~~~d~vld~~g 117 (228)
+.+|+++.+++
T Consensus 89 ~~~~id~vi~~Ag 101 (247)
T PRK08945 89 QFGRLDGVLHNAG 101 (247)
T ss_pred HhCCCCEEEECCc
Confidence 36899998876
No 303
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.64 E-value=0.0013 Score=50.45 Aligned_cols=105 Identities=17% Similarity=0.138 Sum_probs=70.9
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106 30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~ 104 (228)
|....+..++++||-.| ++.|..++.+++.++ .+|+.++.+++..+.+++ +.|...-+..... +..+.+.++
T Consensus 60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l 136 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQL 136 (234)
T ss_pred HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHH
Confidence 33456677889999998 677888888888764 499999999988877763 3454332222222 444444433
Q ss_pred C----CCCccEEEcCcc----hhHHHHHHHccccCcEEEEE
Q 027106 105 F----PDGIDIYFDNVG----AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 105 ~----~~~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~ 137 (228)
. .+.||+||--.. ...+..+++++++||.++.-
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 237999875432 24788889999999988763
No 304
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.64 E-value=0.00047 Score=53.74 Aligned_cols=81 Identities=21% Similarity=0.263 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+ |... ..|..+.......+.+... +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999999999999998888888999999998887665443232 3211 2344443233333333221 368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999998873
No 305
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.64 E-value=0.00044 Score=54.03 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCchHHHHHH-HHHHHcCCEEEEEeCCHHHHHHHHHH----hCC---CceeeccChhhHHHHHHHHCCC-
Q 027106 37 KKGEKVFVSAASGSVGHLVG-QYAKLFGCYVVGSAGSKEKVTLLKDK----LGF---DDAFNYKEETDLKAALKRYFPD- 107 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~-~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~~~~- 107 (228)
+-|++..|+||+.|+|.+-+ ++|+ .|.+|+.+.|++++++..+++ .++ ..++|..+++..-+.+++...+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 45789999999999998866 5555 899999999999999777644 343 2246766652234555555555
Q ss_pred CccEEEcCcch
Q 027106 108 GIDIYFDNVGA 118 (228)
Q Consensus 108 ~~d~vld~~g~ 118 (228)
.+-+++|++|.
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 78889999884
No 306
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00047 Score=53.63 Aligned_cols=80 Identities=21% Similarity=0.278 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD--KLGFDD---AFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
++.+++|+||+|++|..+++.+...|++|++++++.+..+.+++ ..+... ..|..+.++....+.+.. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999888899999999987654333331 223221 234443323333333221 13689
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+++.++|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999887
No 307
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.64 E-value=0.00041 Score=53.73 Aligned_cols=80 Identities=21% Similarity=0.267 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
.+.+|||+||++++|..++..+...|++|+.++++.++.+.+.++ .+.. . ..|..+.++..+.+..... +++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998888999999999887766544322 2321 1 2344444233333333221 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 90 d~li~~ag 97 (255)
T PRK06113 90 DILVNNAG 97 (255)
T ss_pred CEEEECCC
Confidence 99999887
No 308
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.63 E-value=0.00045 Score=53.91 Aligned_cols=80 Identities=16% Similarity=0.255 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFD--DAFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+|++++|+||++ ++|.++++.+...|++|+.+.+++. ..+.+..+.+.. ...|..+.+++...+.+... +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 578999999875 8999999888889999998887632 223332122321 12355544344444443322 36
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999986
No 309
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.63 E-value=0.00045 Score=53.69 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----hCCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK----LGFD-D--AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~----~g~~-~--~~~~~~~~~~~~~~~~~~~--~ 107 (228)
+|+++||+||++++|.+++..+...|++|+.+.+ ++++.+.+.++ .+.. . .+|..+.++....+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999988889999988764 44444333212 2321 1 2344444344444433322 3
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6999999875
No 310
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.63 E-value=0.0011 Score=50.12 Aligned_cols=100 Identities=20% Similarity=0.196 Sum_probs=66.6
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
+...+++|++||-.| +|.|..++.+++..+. +|+.++.+++..+.+++. +|.+.+-... . +..+... ..
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~-~-d~~~~~~--~~ 144 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV-G-DGTQGWE--PL 144 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE-C-CcccCCc--cc
Confidence 556789999999998 6778888888887654 799999998887777633 3443221111 1 2111111 11
Q ss_pred CCccEEEcCcc-hhHHHHHHHccccCcEEEEE
Q 027106 107 DGIDIYFDNVG-AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 107 ~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~ 137 (228)
+.||+|+-... ......+.+.|++||+++..
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 37998875433 34666788999999998874
No 311
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.62 E-value=0.00021 Score=51.48 Aligned_cols=78 Identities=19% Similarity=0.319 Sum_probs=50.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCC
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS--KEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDG 108 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~--~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~ 108 (228)
++++|+||++++|...++.+...|. +|+.+.++ .++.+.+.++ .+.. . ..|..+.++....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999998887777777 77888887 4544444223 3421 1 134444434444444433 237
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++|+++|
T Consensus 81 ld~li~~ag 89 (167)
T PF00106_consen 81 LDILINNAG 89 (167)
T ss_dssp ESEEEEECS
T ss_pred ccccccccc
Confidence 999998877
No 312
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.62 E-value=0.00041 Score=53.39 Aligned_cols=81 Identities=19% Similarity=0.238 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
.+.+|||+||+|++|..++..+...|++|++++++.++.+.+.+. .+... ..|..+.+++.+.+.+... +++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999999988888899999999986654433212 22211 1234433233333333221 368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|+++.+++.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999988753
No 313
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.62 E-value=0.0012 Score=48.89 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=61.1
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCC-C
Q 027106 33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLF-G-CYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPD-G 108 (228)
Q Consensus 33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g-~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~-~ 108 (228)
...+++|++||..|+ |+-+. +..+++.. + .+|++++.++.. . ..+...+ .|..+. .....+.+..++ +
T Consensus 27 ~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence 356799999999994 44444 44444443 3 489999988754 1 2233321 233333 334445544444 8
Q ss_pred ccEEEc-Cc----c-------------hhHHHHHHHccccCcEEEEEe
Q 027106 109 IDIYFD-NV----G-------------AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 109 ~d~vld-~~----g-------------~~~~~~~~~~l~~~G~~v~~g 138 (228)
+|+|+. .. | ...+..+.++|+++|+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999995 21 2 236677889999999999864
No 314
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00045 Score=55.17 Aligned_cols=79 Identities=16% Similarity=0.210 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HhCCCc---eeeccChhhHHHHH
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----------EKVTLLKD---KLGFDD---AFNYKEETDLKAAL 101 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----------~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~ 101 (228)
.|++++|+||++++|.++++.+...|++|++++++. ++.+.+.+ ..|... ..|..+.++....+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 578999999999999999999888999999998762 23332221 233211 23444442444333
Q ss_pred HHHCC--CCccEEEcCc
Q 027106 102 KRYFP--DGIDIYFDNV 116 (228)
Q Consensus 102 ~~~~~--~~~d~vld~~ 116 (228)
.+... +++|++++++
T Consensus 87 ~~~~~~~g~iDilVnnA 103 (305)
T PRK08303 87 ERIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHHcCCccEEEECC
Confidence 33222 4699999987
No 315
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.60 E-value=0.0015 Score=50.35 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHhCCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVT----LLKDKLGFD-D--AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~----~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~ 107 (228)
.+.++||+||+|++|...++.+...|++|+...++ .+... .++ +.+.. . ..|..+..+....+.+... +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 36799999999999999998888899998776643 22222 222 23322 1 1344443233333333221 3
Q ss_pred CccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106 108 GIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 108 ~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
++|++|.++|.. ..+.+.+.++..|+++.++...+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 689999988720 12334556667789999887553
No 316
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.60 E-value=0.00049 Score=53.00 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ce--eeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-DA--FNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+. .+.. .+ .|..+.+...+.+..... +++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999888999999999888766554422 2221 11 233333233333333221 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++|.++|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999886
No 317
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.60 E-value=0.00038 Score=54.22 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=51.7
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGS---KEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+++++||+|| ++++|.++++.+...|++|+.+.+. .++.+.+.++++... ..|..+.++....+.+... ++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 5799999998888899999887543 334443432444321 2344444344444443322 47
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 999999876
No 318
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.59 E-value=0.00046 Score=53.41 Aligned_cols=80 Identities=21% Similarity=0.300 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
.|.++||+|+++++|.++++.+...|++|+.++++.. ..+.++ +.+... ..|..+.++....+.+... +++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999998889999998875432 223333 334211 1343333233333333221 3699
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998873
No 319
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.0014 Score=51.42 Aligned_cols=101 Identities=20% Similarity=0.176 Sum_probs=63.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC-CCCccE
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF-PDGIDI 111 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~-~~~~d~ 111 (228)
+++++|+|+ |++|.+++..+. .|++|+++++++++.+.+.+++ |.. . ..|..+.+++...+.+.. .+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467899997 899999988775 7999999998877665443233 321 1 235554434444443331 147999
Q ss_pred EEcCcchh----H---------------HHHHHHccccCcEEEEEeeec
Q 027106 112 YFDNVGAE----M---------------QEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 112 vld~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+++++|.. . .+.+++.+.++|+++.++...
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 99998731 1 233445566667777766544
No 320
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00087 Score=51.43 Aligned_cols=76 Identities=20% Similarity=0.248 Sum_probs=51.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Cc--eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DD--AFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
.+++|+||+|++|...+..+...|++|+++++++++.+.+. ..+. .. ..|..+.+++.+.+.+. ....|.++.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~a 79 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNA 79 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcC
Confidence 47999999999999988888888999999999988877665 3221 11 24555543444444433 22457766555
Q ss_pred c
Q 027106 117 G 117 (228)
Q Consensus 117 g 117 (228)
|
T Consensus 80 g 80 (240)
T PRK06101 80 G 80 (240)
T ss_pred c
Confidence 4
No 321
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.57 E-value=0.00059 Score=56.46 Aligned_cols=75 Identities=27% Similarity=0.382 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Cc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DD-AFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
+|++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+. .. ..|..+.++ +.+.. +++|++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~----v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAA----LAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHH----HHHHh-CCCCEEEE
Confidence 578999999999999999988888899999999887665432211111 11 124343312 22222 36999998
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 876
No 322
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.57 E-value=0.0028 Score=52.09 Aligned_cols=78 Identities=27% Similarity=0.318 Sum_probs=58.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
...+--.+.+|||.|+ |-+|..++..+...|. +|++..|+.++.+.+.+++|... +..+ +..+.+. .+|
T Consensus 171 ~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~---el~~~l~-----~~D 240 (414)
T COG0373 171 RIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALE---ELLEALA-----EAD 240 (414)
T ss_pred HHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHH---HHHHhhh-----hCC
Confidence 3344347889999996 9999999999999996 89999999999888776899533 2222 3333332 389
Q ss_pred EEEcCcchh
Q 027106 111 IYFDNVGAE 119 (228)
Q Consensus 111 ~vld~~g~~ 119 (228)
+||.+++.+
T Consensus 241 vVissTsa~ 249 (414)
T COG0373 241 VVISSTSAP 249 (414)
T ss_pred EEEEecCCC
Confidence 999998864
No 323
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.56 E-value=0.00046 Score=53.55 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=52.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC--c--eeeccChhhHHHHHHHHC--CCC
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFD--D--AFNYKEETDLKAALKRYF--PDG 108 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~--~--~~~~~~~~~~~~~~~~~~--~~~ 108 (228)
++++||+||+|++|...++.+...|++|+.++++..+.+.+.++ .+.. . ..|..+..+....+.+.. .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999998888899999999887655444322 2211 1 124443323333333321 146
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999886
No 324
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.00074 Score=52.07 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHH---HCCCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKR---YFPDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~---~~~~~~d 110 (228)
.+.++||+||+|++|..++..+...|++|+.+.+ +.++.+.+.++++.. . ..|..+.+++.+.+.+ ..++++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3578999999999999999988888999987654 455555444344421 1 1244443233333333 2222499
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++++++|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9998875
No 325
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=97.56 E-value=0.00066 Score=50.79 Aligned_cols=105 Identities=18% Similarity=0.157 Sum_probs=71.9
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106 30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~ 104 (228)
|....+.....+||-+| +++|..++.+|+.+ +.+|+.++.+++..+.+++ +.|...-+..... +..+.+.++
T Consensus 37 L~~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l 113 (205)
T PF01596_consen 37 LQMLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPEL 113 (205)
T ss_dssp HHHHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHH
T ss_pred HHHHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHH
Confidence 33445566778999999 88899999999986 4699999999998888763 3455332332222 333444333
Q ss_pred ---C-CCCccEEE-cCcch---hHHHHHHHccccCcEEEEE
Q 027106 105 ---F-PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 105 ---~-~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~ 137 (228)
. .+.||.|| |+.-. ..+..++++|++||.++.=
T Consensus 114 ~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 114 ANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp HHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 2 23799986 55433 3788899999999998884
No 326
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00057 Score=53.41 Aligned_cols=78 Identities=19% Similarity=0.228 Sum_probs=51.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
+|+|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +... ..|..+.+++.+.+..... +++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 7999999999999999888888999999998887665443222 2221 1233333233333332221 369999
Q ss_pred EcCcch
Q 027106 113 FDNVGA 118 (228)
Q Consensus 113 ld~~g~ 118 (228)
++++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 998873
No 327
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=97.55 E-value=0.00078 Score=51.77 Aligned_cols=106 Identities=16% Similarity=0.233 Sum_probs=68.0
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhH-HHHHHH
Q 027106 30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDL-KAALKR 103 (228)
Q Consensus 30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~-~~~~~~ 103 (228)
+....++.||++|+=.| +|.|.++.-+++..|. +|+..+.++++.+.+++. +|....+..... |. .+.+.+
T Consensus 32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--ST
T ss_pred HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccc
Confidence 33568999999999887 6778888888888874 999999999998888753 555432221111 22 111211
Q ss_pred HCCCCccEEEcCcch--hHHHHHHHcc-ccCcEEEEEe
Q 027106 104 YFPDGIDIYFDNVGA--EMQEAAIANM-NTYGRVAVCG 138 (228)
Q Consensus 104 ~~~~~~d~vld~~g~--~~~~~~~~~l-~~~G~~v~~g 138 (228)
...+.+|.||-=.+. ..+..+.+.| ++||+++++.
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 112368987643443 5999999999 8999999985
No 328
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.55 E-value=0.0045 Score=46.04 Aligned_cols=102 Identities=13% Similarity=0.143 Sum_probs=64.6
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 107 (228)
...+++++++||=.| .|.|..++.+++.. +.+|++++.+++..+.+++ +++...+-... . +..+.+.... .
T Consensus 34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~-d~~~~~~~~~-~ 108 (196)
T PRK07402 34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-G-SAPECLAQLA-P 108 (196)
T ss_pred HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-C-chHHHHhhCC-C
Confidence 556788999998888 45566666667654 4699999999988887763 34543321111 1 2222222222 2
Q ss_pred CccE-EEcCcc--hhHHHHHHHccccCcEEEEEe
Q 027106 108 GIDI-YFDNVG--AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 108 ~~d~-vld~~g--~~~~~~~~~~l~~~G~~v~~g 138 (228)
.+|. +++... ...++.+.+.|++||+++...
T Consensus 109 ~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 109 APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 2344 444332 247888899999999998874
No 329
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.54 E-value=0.00047 Score=60.98 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYF--PD 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~--~~ 107 (228)
.|+++||+||+|++|.++++.+...|++|++++++.++.+.+.+++ +... ..|..+..++...+.+.. -+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999988889999999999887665544232 3211 234444323434343322 24
Q ss_pred CccEEEcCcch
Q 027106 108 GIDIYFDNVGA 118 (228)
Q Consensus 108 ~~d~vld~~g~ 118 (228)
++|++++++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999998873
No 330
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.54 E-value=0.0011 Score=51.02 Aligned_cols=75 Identities=17% Similarity=0.317 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v 112 (228)
+++++||+|++|++|...++.+...|++|++++++. .. ..+.. . ..|..+.+.+.+.+.+... +++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999998888999999999775 22 22221 1 1244433233333333221 368999
Q ss_pred EcCcch
Q 027106 113 FDNVGA 118 (228)
Q Consensus 113 ld~~g~ 118 (228)
++++|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998774
No 331
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.54 E-value=0.0024 Score=43.37 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=66.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 107 (228)
....+.++++|+-.|+ |.|..+..+++..+ .+|++++.++...+.+++ .++...+.... . +....... ..+
T Consensus 13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE-G-DAPEALED-SLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe-c-cccccChh-hcC
Confidence 4456778899999993 44988999998865 599999999988877653 24433221111 1 11111111 123
Q ss_pred CccEEEcCcch----hHHHHHHHccccCcEEEEE
Q 027106 108 GIDIYFDNVGA----EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 108 ~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~ 137 (228)
.+|+|+...+. ..++.+.+.|+++|+++..
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 79999865432 3788899999999999875
No 332
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.54 E-value=0.00078 Score=54.04 Aligned_cols=94 Identities=18% Similarity=0.201 Sum_probs=61.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGAE 119 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~ 119 (228)
+|||+||+|-+|..+++.+...|.+|++++++.++...+. ..+.+.+ .|..+..++.+.+ .++|+|+++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al-----~g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF-----KGVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH-----CCCCEEEECCCCC
Confidence 7999999999999999998889999999998877655544 4454322 1333331232222 2589999986531
Q ss_pred -------------HHHHHHHccccCc--EEEEEeee
Q 027106 120 -------------MQEAAIANMNTYG--RVAVCGVI 140 (228)
Q Consensus 120 -------------~~~~~~~~l~~~G--~~v~~g~~ 140 (228)
....+++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1123445454444 88887764
No 333
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=97.53 E-value=0.0014 Score=51.21 Aligned_cols=103 Identities=13% Similarity=0.189 Sum_probs=68.2
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
...++.++.+||=.|+ |.|..+..+++..+++|++++.+++..+.+++.+.....+..... ++.. ..+.++.||+
T Consensus 46 ~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~~FD~ 120 (263)
T PTZ00098 46 SDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPENTFDM 120 (263)
T ss_pred HhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCCCeEE
Confidence 5578899999999983 456666777777788999999999988888844432111111111 2211 0111237999
Q ss_pred EEcC--c---c--h--hHHHHHHHccccCcEEEEEee
Q 027106 112 YFDN--V---G--A--EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 112 vld~--~---g--~--~~~~~~~~~l~~~G~~v~~g~ 139 (228)
|+.. . + . ..++.+.+.|+|||+++....
T Consensus 121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9852 1 1 1 277888999999999998754
No 334
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00036 Score=53.17 Aligned_cols=75 Identities=21% Similarity=0.193 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeeccChhhHHHHHHHHCCC-CccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DDAFNYKEETDLKAALKRYFPD-GIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~ 115 (228)
.+.++||+||+|++|...++.+...|.+|+++.++.++ . ... ....|..+.+.....+.+.... ++|+++.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 36789999999999999999888899999999987654 1 111 1123444442444444433333 68999998
Q ss_pred cch
Q 027106 116 VGA 118 (228)
Q Consensus 116 ~g~ 118 (228)
+|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 873
No 335
>PRK04148 hypothetical protein; Provisional
Probab=97.53 E-value=0.001 Score=45.96 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=55.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec-cChhhHHHHHHHHCCCCccEEE
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-KEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~d~vl 113 (228)
.-.++.++++.| .| .|...+..+...|.+|++++.++...+.++ +.+...+.+. -++ +. .+ .+++|+|.
T Consensus 13 ~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~----y~~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EI----YKNAKLIY 82 (134)
T ss_pred ccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HH----HhcCCEEE
Confidence 334678999999 46 887666666678999999999999988888 7776433221 111 11 11 13688888
Q ss_pred cCcchh-HHHHHHHcccc
Q 027106 114 DNVGAE-MQEAAIANMNT 130 (228)
Q Consensus 114 d~~g~~-~~~~~~~~l~~ 130 (228)
..-..+ ....++++.+.
T Consensus 83 sirpp~el~~~~~~la~~ 100 (134)
T PRK04148 83 SIRPPRDLQPFILELAKK 100 (134)
T ss_pred EeCCCHHHHHHHHHHHHH
Confidence 887764 44444444443
No 336
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.52 E-value=0.00054 Score=52.77 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVG-SAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~-~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+|.++||+||+|++|..++..+...|++|++ ..++.++.+.+.++ .+... ..|..+..+....+.+... ++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999998889998876 45666554443222 23321 1344443233333333221 36
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|++++++|
T Consensus 83 id~vi~~ag 91 (250)
T PRK08063 83 LDVFVNNAA 91 (250)
T ss_pred CCEEEECCC
Confidence 899999886
No 337
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.52 E-value=0.0043 Score=48.76 Aligned_cols=107 Identities=14% Similarity=0.195 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CC---CceeeccChhhH---HHHHHHHCCC-C
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GF---DDAFNYKEETDL---KAALKRYFPD-G 108 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~~---~~~~~~~~~~-~ 108 (228)
.+++-|||+|+.+|.|..++.-+...|.+|++.+..++..+.++.+. .. +-.+|..+++++ ...+++..+. +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 45667999999999999999888899999999997777767666333 11 223555554333 3334444554 7
Q ss_pred ccEEEcCcch---------------------------hHHHHHHHcccc-CcEEEEEeeeccc
Q 027106 109 IDIYFDNVGA---------------------------EMQEAAIANMNT-YGRVAVCGVISEY 143 (228)
Q Consensus 109 ~d~vld~~g~---------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~ 143 (228)
.=.++|++|- ...+..+.++++ .||+|.+++..|.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 7778888871 123445667766 6999999987653
No 338
>PRK00811 spermidine synthase; Provisional
Probab=97.52 E-value=0.0015 Score=51.52 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeeccChhhHHHHHHHHCCCC
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF-------DDAFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~ 108 (228)
..+++||+.| +|.|..+..+++..+. +|++++.+++-.+.+++.+.. +.-+..... +....+.. ..+.
T Consensus 75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 4567999999 5667778888887665 899999999988888843321 111111111 33444433 3448
Q ss_pred ccEEEcCcc-----------hhHHHHHHHccccCcEEEEE
Q 027106 109 IDIYFDNVG-----------AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 109 ~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~ 137 (228)
+|+|+.... .+.++.+.+.|+++|.++.-
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999875321 12467788999999999874
No 339
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0011 Score=52.00 Aligned_cols=85 Identities=19% Similarity=0.189 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCc----eeeccChh
Q 027106 23 GLTAYAGLFEIG--KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDD----AFNYKEET 95 (228)
Q Consensus 23 ~~ta~~~l~~~~--~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~ 95 (228)
+.--+.+|.+.. ...+|++++|.|| ||.+.+++.-++..|+ +|+++.|+.++.+.+.+.++... .....+.
T Consensus 108 ~~G~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~- 185 (283)
T COG0169 108 GIGFLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL- 185 (283)
T ss_pred HHHHHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc-
Confidence 333444554322 2346899999996 9999999999999996 89999999999888875665321 1111111
Q ss_pred hHHHHHHHHCCC-CccEEEcCcch
Q 027106 96 DLKAALKRYFPD-GIDIYFDNVGA 118 (228)
Q Consensus 96 ~~~~~~~~~~~~-~~d~vld~~g~ 118 (228)
... .+|+++|+++.
T Consensus 186 ---------~~~~~~dliINaTp~ 200 (283)
T COG0169 186 ---------EGLEEADLLINATPV 200 (283)
T ss_pred ---------ccccccCEEEECCCC
Confidence 011 38999999873
No 340
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.001 Score=52.13 Aligned_cols=81 Identities=20% Similarity=0.195 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
++.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++ .+... ..|..+.+++...+.+.. -+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 346899999999999999988888899999999877665443322 23221 124444323333333321 1368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999988863
No 341
>PRK12743 oxidoreductase; Provisional
Probab=97.51 E-value=0.00069 Score=52.52 Aligned_cols=79 Identities=15% Similarity=0.228 Sum_probs=50.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-ce--eeccChhhHHHHHHHHCC--CCc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKD---KLGFD-DA--FNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~-~~--~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++++||+||++++|..+++.+...|++|+.+.+ +.++.+.+.+ ..|.. .. .|..+.+.....+.+... +++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999988754 4444333321 23432 11 344443233333332211 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|+++.++|
T Consensus 82 d~li~~ag 89 (256)
T PRK12743 82 DVLVNNAG 89 (256)
T ss_pred CEEEECCC
Confidence 99998887
No 342
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.50 E-value=0.00067 Score=52.36 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=52.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+.++||+|++|++|..++..+...|.+|++++++.++.+.+.+.+ +.. ...|..+.+++...+.+.. .+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 358999999999999999888888999999999887766555222 221 1124444323333333321 13689
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+++.+.+
T Consensus 81 ~vi~~a~ 87 (255)
T TIGR01963 81 ILVNNAG 87 (255)
T ss_pred EEEECCC
Confidence 9988775
No 343
>PLN02366 spermidine synthase
Probab=97.50 E-value=0.0016 Score=51.83 Aligned_cols=99 Identities=16% Similarity=0.051 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCC
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~ 108 (228)
....++||+.|+ |-|..+..+++..+. +|.+++.+++-.+.+++.+.. +.-+..... |....+++..++.
T Consensus 89 ~~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~ 165 (308)
T PLN02366 89 IPNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGT 165 (308)
T ss_pred CCCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCC
Confidence 356789999994 446677788887665 899999888888888733321 111111112 4444444433347
Q ss_pred ccEEEcCcch-----------hHHHHHHHccccCcEEEEE
Q 027106 109 IDIYFDNVGA-----------EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 109 ~d~vld~~g~-----------~~~~~~~~~l~~~G~~v~~ 137 (228)
+|+|+--... +.++.+.++|+++|.++.-
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 9998743221 3577888999999999763
No 344
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=97.49 E-value=0.0031 Score=48.55 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=72.3
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106 30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~ 104 (228)
|....+....++||-.| +.+|..++.+|+.+ +.+|+.++.+++..+.+++ +.|..+-+..... +..+.+.++
T Consensus 71 L~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l 147 (247)
T PLN02589 71 LNMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQM 147 (247)
T ss_pred HHHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHH
Confidence 33445566778999999 78999999999987 4599999999887777653 3465333333333 444455443
Q ss_pred C-----CCCccEEE-cCcch---hHHHHHHHccccCcEEEE
Q 027106 105 F-----PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAV 136 (228)
Q Consensus 105 ~-----~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~ 136 (228)
. .+.||.|| |+--. ..+..++++|++||.++.
T Consensus 148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 2 24799987 44322 378888999999999876
No 345
>PRK07069 short chain dehydrogenase; Validated
Probab=97.48 E-value=0.00065 Score=52.31 Aligned_cols=77 Identities=16% Similarity=0.290 Sum_probs=50.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC----ceeeccChhhHHHHHHHHCC--CCc
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKLG----FD----DAFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~g----~~----~~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+++|+||+|++|...++.+...|++|++++++ .++.+.+.+++. .. ...|..+.+.+...+.+... +++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 38999999999999998888889999999987 555544442332 11 11244444344443333222 368
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|+++.++|
T Consensus 81 d~vi~~ag 88 (251)
T PRK07069 81 SVLVNNAG 88 (251)
T ss_pred cEEEECCC
Confidence 99999887
No 346
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.48 E-value=0.00093 Score=49.81 Aligned_cols=101 Identities=17% Similarity=0.079 Sum_probs=64.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ 108 (228)
...+..++.+||-.| .|.|..+..+++. |.+|++++.+++..+.+++.. +... +..... ++.+. . .++.
T Consensus 24 ~~l~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~--~-~~~~ 95 (197)
T PRK11207 24 EAVKVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL--T-FDGE 95 (197)
T ss_pred HhcccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC--C-cCCC
Confidence 334566778999999 5567788888874 889999999998777766322 2221 111111 22111 1 1236
Q ss_pred ccEEEcCcc-----h----hHHHHHHHccccCcEEEEEeee
Q 027106 109 IDIYFDNVG-----A----EMQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 109 ~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~~ 140 (228)
||+|+.+.. . ..+..+.++|++||.++.+...
T Consensus 96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~~ 136 (197)
T PRK11207 96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 136 (197)
T ss_pred cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 999986432 1 3677888999999997665443
No 347
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00037 Score=54.09 Aligned_cols=76 Identities=21% Similarity=0.280 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYF--PDGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vld 114 (228)
+|+++||+||+|++|...++.+...|++|++++++.... .. -... ...|..+.+.....+.+.. .+++|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999999999999999988888899999999875431 11 0111 1234444323332222221 136999999
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 887
No 348
>PRK09135 pteridine reductase; Provisional
Probab=97.47 E-value=0.00091 Score=51.38 Aligned_cols=80 Identities=10% Similarity=0.102 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC----ceeeccChhhHHHHHHHHC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKL---GFD----DAFNYKEETDLKAALKRYF--PD 107 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~---g~~----~~~~~~~~~~~~~~~~~~~--~~ 107 (228)
.+.++||+||+|++|..+++.+...|++|++++++ ..+.+.+.+.+ +.. ...|..+.+.....+.... -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999998888889999999875 33333332121 111 1234444323333333221 13
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
++|+||.++|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 349
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.47 E-value=0.00075 Score=51.78 Aligned_cols=79 Identities=25% Similarity=0.358 Sum_probs=51.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
++++||+||+|++|..++..+...|++|+++ .++.++.+.+.+.+ +.. . ..|..+.+.+...+..... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5699999999999999998877889999988 88776655443232 211 1 1244443233332322211 369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (247)
T PRK05565 85 DILVNNAG 92 (247)
T ss_pred CEEEECCC
Confidence 99998876
No 350
>PRK05599 hypothetical protein; Provisional
Probab=97.46 E-value=0.00074 Score=52.09 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=50.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc----eeeccChhhHHHHHHHHC--CCCccE
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD----AFNYKEETDLKAALKRYF--PDGIDI 111 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~----~~~~~~~~~~~~~~~~~~--~~~~d~ 111 (228)
+++|+||++++|.+.++.+. .|.+|+++.+++++.+.+.+++ |... .+|..+.+.....+.+.. .+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999887665 4999999999888776554333 3221 234444323333333322 147999
Q ss_pred EEcCcc
Q 027106 112 YFDNVG 117 (228)
Q Consensus 112 vld~~g 117 (228)
+++++|
T Consensus 81 lv~nag 86 (246)
T PRK05599 81 AVVAFG 86 (246)
T ss_pred EEEecC
Confidence 998876
No 351
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.46 E-value=0.0014 Score=51.68 Aligned_cols=109 Identities=17% Similarity=0.132 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHH
Q 027106 22 SGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKA 99 (228)
Q Consensus 22 ~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 99 (228)
.+.....++... ..-..+.+++|.|+ |++|.+++..+...| .+|+++.++.++.+.+.++++....+... . +..+
T Consensus 105 D~~G~~~~l~~~~~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~-~~~~ 181 (278)
T PRK00258 105 DGIGFVRALEERLGVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-L-ELQE 181 (278)
T ss_pred cHHHHHHHHHhccCCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-c-cchh
Confidence 334444455321 22346789999995 999999999999999 59999999998887776455422101110 0 1101
Q ss_pred HHHHHCCCCccEEEcCcchhHH------HHHHHccccCcEEEEEe
Q 027106 100 ALKRYFPDGIDIYFDNVGAEMQ------EAAIANMNTYGRVAVCG 138 (228)
Q Consensus 100 ~~~~~~~~~~d~vld~~g~~~~------~~~~~~l~~~G~~v~~g 138 (228)
. -..+|+|++|++.... ......++++..++.+-
T Consensus 182 ~-----~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 182 E-----LADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred c-----cccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 1 1258999999874321 11235666666666653
No 352
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00076 Score=52.87 Aligned_cols=81 Identities=25% Similarity=0.358 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---HhCCCc---eeeccChhhHHHHHHHH
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-------VTLLKD---KLGFDD---AFNYKEETDLKAALKRY 104 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-------~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~ 104 (228)
++.++||+||+|++|..+++.+...|++|++++++.+. ++.+.+ ..+... ..|..+.+.....+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 56799999999999999998888889999999976532 111111 233221 13444442333333332
Q ss_pred CC--CCccEEEcCcch
Q 027106 105 FP--DGIDIYFDNVGA 118 (228)
Q Consensus 105 ~~--~~~d~vld~~g~ 118 (228)
.. +.+|++|+++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 11 369999998773
No 353
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0014 Score=50.87 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~ 108 (228)
.+.++||+||+|++|..+++.+...|++|+++.+ +.++.+.+.+++ +.. . ..|..+.+...+.+.+.. .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999888889999887765 344443332122 321 1 234444323333333322 136
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|+++.++|
T Consensus 88 iD~vi~~ag 96 (258)
T PRK09134 88 ITLLVNNAS 96 (258)
T ss_pred CCEEEECCc
Confidence 999999986
No 354
>PRK05855 short chain dehydrogenase; Validated
Probab=97.44 E-value=0.00066 Score=58.87 Aligned_cols=81 Identities=19% Similarity=0.148 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 109 (228)
.+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+. .|.. . ..|..+.+.....+.+.. .+++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999988888999999999988776654422 2331 1 234454423333333322 1369
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999874
No 355
>PLN02244 tocopherol O-methyltransferase
Probab=97.44 E-value=0.0016 Score=52.81 Aligned_cols=98 Identities=13% Similarity=0.189 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
+++++||-.| .|.|..+..+++..|++|++++.++...+.+++. .|...-+..... +..+ ..+..+.||+|+
T Consensus 117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~--~~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN--QPFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc--CCCCCCCccEEE
Confidence 7889999998 5667778888888899999999999887776622 233111111111 1111 011224799998
Q ss_pred cCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106 114 DNVG-----A--EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 114 d~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 139 (228)
.... . ..+.++.+.|+|||+++....
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6432 1 377889999999999998764
No 356
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.44 E-value=0.00088 Score=51.27 Aligned_cols=78 Identities=23% Similarity=0.299 Sum_probs=49.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+++||+|++|++|..+++.+...|++|+++.+ ++.+.+...++. +.. ...|..+...+...+.+.. .+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47899999999999999988889999998886 444433322122 211 1124443323333333222 13689
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+||.++|
T Consensus 81 ~vi~~ag 87 (242)
T TIGR01829 81 VLVNNAG 87 (242)
T ss_pred EEEECCC
Confidence 9999886
No 357
>PLN00203 glutamyl-tRNA reductase
Probab=97.43 E-value=0.0048 Score=52.72 Aligned_cols=74 Identities=24% Similarity=0.358 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
.+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++...+ ......+..+.+ ...|+||.|+
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al-----~~aDVVIsAT 337 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACA-----AEADVVFTST 337 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHH-----hcCCEEEEcc
Confidence 4789999996 9999999999999997 899999999988777756642211 111111222222 2589999998
Q ss_pred ch
Q 027106 117 GA 118 (228)
Q Consensus 117 g~ 118 (228)
+.
T Consensus 338 ~s 339 (519)
T PLN00203 338 SS 339 (519)
T ss_pred CC
Confidence 75
No 358
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0011 Score=54.02 Aligned_cols=95 Identities=21% Similarity=0.165 Sum_probs=67.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC---C-CceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG---F-DDAFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
.+|||.|+ |++|..+++.+.+.+ .+|++.+++.++...+. ... . ...+|..+.+...+.+. ++|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence 57999996 999999999988888 69999999999988887 443 2 23455554423334443 3699999
Q ss_pred CcchhHHHHHH-HccccCcEEEEEeeec
Q 027106 115 NVGAEMQEAAI-ANMNTYGRVAVCGVIS 141 (228)
Q Consensus 115 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~ 141 (228)
+.+...-..++ .|++.+=.++......
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcccCC
Confidence 99986444555 5556666777766543
No 359
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=97.42 E-value=0.00021 Score=54.62 Aligned_cols=103 Identities=19% Similarity=0.277 Sum_probs=63.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCce-eeccChhhHHHHHHHHC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL---GFDDA-FNYKEETDLKAALKRYF 105 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~ 105 (228)
+....++|++||-.+ +|.|..+..+++..+ .+|++++-+++-++.++++. +...+ +...+.+++ .+.
T Consensus 41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~l-----p~~ 113 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDL-----PFP 113 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S-
T ss_pred hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHh-----cCC
Confidence 345678999999998 677888888888876 49999999999998887543 22221 111111011 111
Q ss_pred CCCccEEEcCcch-------hHHHHHHHccccCcEEEEEeeec
Q 027106 106 PDGIDIYFDNVGA-------EMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 106 ~~~~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
++.||+|..+.|- ..+.++.+.|+|||+++++....
T Consensus 114 d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 114 DNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 2379999876652 28889999999999999988654
No 360
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.42 E-value=0.0011 Score=51.42 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
++.++||+||++++|...++.+...|++|+++.++. +..+.+.+ ..+.. ...|..+.++....+..... ++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 678999999999999999999999999988877643 33332221 22321 12344444233333332221 36
Q ss_pred ccEEEcCcch
Q 027106 109 IDIYFDNVGA 118 (228)
Q Consensus 109 ~d~vld~~g~ 118 (228)
+|++++++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999988873
No 361
>PLN00015 protochlorophyllide reductase
Probab=97.42 E-value=0.001 Score=53.10 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=51.4
Q ss_pred EEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--Cc----eeeccChhhHHHHHHHHC--CCCccEEE
Q 027106 43 FVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF--DD----AFNYKEETDLKAALKRYF--PDGIDIYF 113 (228)
Q Consensus 43 lI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--~~----~~~~~~~~~~~~~~~~~~--~~~~d~vl 113 (228)
||+||++++|..+++.+...| ++|++++++.++.+.+.++++. .. .+|..+.+.....+.+.. .+++|+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999888888889 8999999988776655535532 11 235544433433343332 23799999
Q ss_pred cCcc
Q 027106 114 DNVG 117 (228)
Q Consensus 114 d~~g 117 (228)
+++|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9886
No 362
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.42 E-value=0.0044 Score=48.62 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHH
Q 027106 23 GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAAL 101 (228)
Q Consensus 23 ~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 101 (228)
+.....+|.......++.+++|.|+ |++|.+++..+...|++|+++.++.++.+.+.++++.. .+.... ..+
T Consensus 101 ~~G~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~----~~~-- 173 (270)
T TIGR00507 101 GIGLVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS----MDE-- 173 (270)
T ss_pred HHHHHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec----hhh--
Confidence 3344444533233456889999996 99999999888888999999999988776665354321 111111 111
Q ss_pred HHHCCCCccEEEcCcchhH---H---HHHHHccccCcEEEEEee
Q 027106 102 KRYFPDGIDIYFDNVGAEM---Q---EAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 102 ~~~~~~~~d~vld~~g~~~---~---~~~~~~l~~~G~~v~~g~ 139 (228)
.....+|+|++|++... . ......++++..++.+..
T Consensus 174 --~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 174 --LPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred --hcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 11125899999987531 1 112345677766766643
No 363
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0009 Score=59.13 Aligned_cols=80 Identities=19% Similarity=0.279 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
.|.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++ +... ..|..+.++..+.+.+... +++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 3679999999999999999888888999999999888766554232 3211 2344444344444433222 369
Q ss_pred cEEEcCcc
Q 027106 110 DIYFDNVG 117 (228)
Q Consensus 110 d~vld~~g 117 (228)
|++++++|
T Consensus 450 d~li~~Ag 457 (657)
T PRK07201 450 DYLVNNAG 457 (657)
T ss_pred CEEEECCC
Confidence 99999887
No 364
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.42 E-value=0.0014 Score=47.92 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=55.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Cc---eeeccChhhHHHHHHHHCC--CCccE
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DD---AFNYKEETDLKAALKRYFP--DGIDI 111 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~---~~~~~~~~~~~~~~~~~~~--~~~d~ 111 (228)
....+|+|+++++|.+..|.....|++|.+.+.+.+..+.....+|. ++ -.|.++..+....+.+... +.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 35678999999999999999999999999999877665555435654 22 2344444333333433322 37899
Q ss_pred EEcCcch
Q 027106 112 YFDNVGA 118 (228)
Q Consensus 112 vld~~g~ 118 (228)
+++|+|-
T Consensus 94 lVncAGI 100 (256)
T KOG1200|consen 94 LVNCAGI 100 (256)
T ss_pred EEEcCcc
Confidence 9999983
No 365
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.41 E-value=0.00097 Score=51.60 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCce-eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GFDDA-FNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
.+.+|||+||+|.+|..+++.+...|.+|+++.+++++........ ++..+ .|..+. ...+.+....++|+||.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEEC
Confidence 3579999999999999999888888999999998877654332111 12111 233321 112222221268999988
Q ss_pred cchh--------------HHHHHHHcccc--CcEEEEEeeec
Q 027106 116 VGAE--------------MQEAAIANMNT--YGRVAVCGVIS 141 (228)
Q Consensus 116 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~ 141 (228)
+|.. ....+++.+.. .++++.++...
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 7631 12334444443 36888877653
No 366
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.41 E-value=0.0032 Score=47.59 Aligned_cols=95 Identities=18% Similarity=0.258 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
+|.+||=.|+.| |++..-+|+ .|++|++++.+++..+.++ ......- +++.. ...+.+... ++.||+|++.
T Consensus 59 ~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~--~~~edl~~~-~~~FDvV~cm 131 (243)
T COG2227 59 PGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQ--ATVEDLASA-GGQFDVVTCM 131 (243)
T ss_pred CCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchh--hhHHHHHhc-CCCccEEEEh
Confidence 889999999533 566666665 6899999999999988887 4333221 34543 222233221 1489999863
Q ss_pred -----cch--hHHHHHHHccccCcEEEEEee
Q 027106 116 -----VGA--EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 116 -----~g~--~~~~~~~~~l~~~G~~v~~g~ 139 (228)
+.. ..+..+.++++|+|.++....
T Consensus 132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~STi 162 (243)
T COG2227 132 EVLEHVPDPESFLRACAKLVKPGGILFLSTI 162 (243)
T ss_pred hHHHccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence 332 377788899999999988643
No 367
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.41 E-value=0.0024 Score=50.06 Aligned_cols=80 Identities=15% Similarity=0.032 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHH
Q 027106 23 GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAAL 101 (228)
Q Consensus 23 ~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 101 (228)
+.....+|.. .+...+++++|.|+ ||.+.+++..+...|+ +|+++.|+.++.+.+.+.++... . . + +
T Consensus 107 ~~Gf~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~-~-~----~ 174 (272)
T PRK12550 107 YIAIAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R-P-D----L 174 (272)
T ss_pred HHHHHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h-h-h----c
Confidence 3344445533 34455679999995 9999999998888998 79999999988887764554211 0 0 1 1
Q ss_pred HHHCCCCccEEEcCcc
Q 027106 102 KRYFPDGIDIYFDNVG 117 (228)
Q Consensus 102 ~~~~~~~~d~vld~~g 117 (228)
....+|+|++|++
T Consensus 175 ---~~~~~dlvINaTp 187 (272)
T PRK12550 175 ---GGIEADILVNVTP 187 (272)
T ss_pred ---ccccCCEEEECCc
Confidence 0125899999986
No 368
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.41 E-value=0.0012 Score=51.04 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=51.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCccE
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGIDI 111 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~ 111 (228)
.+++|+|++|++|...++.+...|++|+.+.++.++.+.+.++ .+.. . ..|..+.+...+.+..... +++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3799999999999999988888999999999887665444322 2321 1 1244443233333333221 36899
Q ss_pred EEcCcch
Q 027106 112 YFDNVGA 118 (228)
Q Consensus 112 vld~~g~ 118 (228)
+++++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998863
No 369
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.40 E-value=0.0014 Score=50.22 Aligned_cols=81 Identities=25% Similarity=0.330 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCCc-e--eeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDK---LGFDD-A--FNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~---~g~~~-~--~~~~~~~~~~~~~~~~~~--~~ 108 (228)
++.++||+|++|++|..++..+...|++|+++.++.. +.+...++ .+... . .|..+.+++...+.+... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999889999977776544 22222212 22221 1 244443233333333322 36
Q ss_pred ccEEEcCcch
Q 027106 109 IDIYFDNVGA 118 (228)
Q Consensus 109 ~d~vld~~g~ 118 (228)
+|+++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999988863
No 370
>PRK08264 short chain dehydrogenase; Validated
Probab=97.40 E-value=0.00078 Score=51.50 Aligned_cols=75 Identities=25% Similarity=0.312 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCCCCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
.+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+. .+.. . ..|..+.+++.+.+... +.+|+++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence 467999999999999999999999999 99999988765432 2221 1 13444432333333321 2589999
Q ss_pred cCcch
Q 027106 114 DNVGA 118 (228)
Q Consensus 114 d~~g~ 118 (228)
.++|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 88875
No 371
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.39 E-value=0.00032 Score=54.63 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYF--PDGIDIYFD 114 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vld 114 (228)
.+.++||+|++|++|.++++.+...|++|+.+++++.+.+. .... ...|..+.+++.+.+.+.. .+++|++++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999999998999999999877654321 1111 1234444424443333322 136899999
Q ss_pred Ccc
Q 027106 115 NVG 117 (228)
Q Consensus 115 ~~g 117 (228)
++|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 887
No 372
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0014 Score=50.68 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHH---C--
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRY---F-- 105 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~---~-- 105 (228)
.+.+++|+|++|++|..+++.+...|++|++. .++.++.+.+.+++ +.. . ..|..+.+++...+.+. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 46799999999999999998888889988774 56665554333232 221 1 13444443444333332 1
Q ss_pred --C-CCccEEEcCcch
Q 027106 106 --P-DGIDIYFDNVGA 118 (228)
Q Consensus 106 --~-~~~d~vld~~g~ 118 (228)
+ +++|++|.++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1 268999988863
No 373
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.38 E-value=0.0016 Score=46.47 Aligned_cols=91 Identities=21% Similarity=0.256 Sum_probs=61.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
-.-.|++++|.|= |-+|.-.++.++.+|++|++++.++-+.-.+. .-|..- . ...+.+ ...|+++.
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v-~------~~~~a~-----~~adi~vt 84 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEV-M------TLEEAL-----RDADIFVT 84 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EE-E-------HHHHT-----TT-SEEEE
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEe-c------CHHHHH-----hhCCEEEE
Confidence 3468999999995 99999999999999999999999998776666 555531 1 222222 24799999
Q ss_pred Ccchh--HHHHHHHccccCcEEEEEee
Q 027106 115 NVGAE--MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 115 ~~g~~--~~~~~~~~l~~~G~~v~~g~ 139 (228)
++|.. .-.+-++.|+.+..+..+|.
T Consensus 85 aTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred CCCCccccCHHHHHHhcCCeEEeccCc
Confidence 99974 34577788998888877774
No 374
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0019 Score=49.62 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=50.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ce--eeccChhhHHHHHHHHCCCCccEE
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD-DA--FNYKEETDLKAALKRYFPDGIDIY 112 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~v 112 (228)
.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. .+ .|..+..+..+.+.+.. ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 58999999999999999988888999999999887665443222 111 11 23343323333333322 247999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+.++|
T Consensus 81 v~~ag 85 (243)
T PRK07102 81 LIAVG 85 (243)
T ss_pred EECCc
Confidence 98766
No 375
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.35 E-value=0.0027 Score=50.10 Aligned_cols=86 Identities=20% Similarity=0.057 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----CceeeccChhhH
Q 027106 23 GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDL 97 (228)
Q Consensus 23 ~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~ 97 (228)
+.....+|.....-..+.+|+|.|+ |++|.+++..+...|+ +|++++++.++.+.+.+.++. ..+.... +.
T Consensus 111 ~~G~~~~l~~~~~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~ 186 (284)
T PRK12549 111 WSGFAESFRRGLPDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DL 186 (284)
T ss_pred HHHHHHHHHhhccCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---ch
Confidence 3334444532222245689999995 9999999999999998 899999998888777645432 1111111 21
Q ss_pred HHHHHHHCCCCccEEEcCcc
Q 027106 98 KAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 98 ~~~~~~~~~~~~d~vld~~g 117 (228)
.+.+ ..+|+|++|++
T Consensus 187 ~~~~-----~~aDiVInaTp 201 (284)
T PRK12549 187 AAAL-----AAADGLVHATP 201 (284)
T ss_pred Hhhh-----CCCCEEEECCc
Confidence 1111 25899999964
No 376
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.35 E-value=0.0012 Score=47.81 Aligned_cols=92 Identities=25% Similarity=0.281 Sum_probs=62.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA 118 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 118 (228)
+|.|+||+|-+|...++-|+..|.+|+++++++++....+ ..-+ .++++.. ...+.+ .|+|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence 6889999999999999999999999999999998865433 1111 1222221 111111 279999998763
Q ss_pred h----------HHHHHHHccccC--cEEEEEeeec
Q 027106 119 E----------MQEAAIANMNTY--GRVAVCGVIS 141 (228)
Q Consensus 119 ~----------~~~~~~~~l~~~--G~~v~~g~~~ 141 (228)
. ..+.++..|+.- -|+..+|.-+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 2 334466677663 4888888654
No 377
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=97.33 E-value=0.0033 Score=49.12 Aligned_cols=150 Identities=17% Similarity=0.080 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccCh----------hhHHHHHHHH
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEE----------TDLKAALKRY 104 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~ 104 (228)
.-.++.++|+.|+ |..|+.++-.++..|+-|...+..+.+.+..+ .+|+...-...++ ++|..+-.++
T Consensus 160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 3456778999995 99999999999999999999888888877777 7887432111110 1333222222
Q ss_pred C-C--CCccEEEcCcc--h-h----HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccc--
Q 027106 105 F-P--DGIDIYFDNVG--A-E----MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH-- 172 (228)
Q Consensus 105 ~-~--~~~d~vld~~g--~-~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 172 (228)
. . .++|+||-++- + + .-..+...|+||..+|.+....++|-+... +..-...+++++.|...-..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~---pg~~v~~~gV~iig~~nlp~r~ 314 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTE---PGKVVTKNGVKIIGYTNLPGRL 314 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccccc---CCeEEEeCCeEEEeecCcchhh
Confidence 2 2 27999998763 2 2 557788999999999998877666643322 12333356677777543221
Q ss_pred ----hhHHHHHHHHHHHHHHc
Q 027106 173 ----LNLYQDFISTTCNHLRS 189 (228)
Q Consensus 173 ----~~~~~~~~~~~~~~~~~ 189 (228)
...+..-+-.+++++.+
T Consensus 315 a~~aS~LYa~Nl~~~l~ll~~ 335 (356)
T COG3288 315 AAQASQLYATNLVNLLKLLCK 335 (356)
T ss_pred hhhHHHHHHHHHHHHHHHHhc
Confidence 33343444455555444
No 378
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.32 E-value=0.00098 Score=54.22 Aligned_cols=77 Identities=21% Similarity=0.286 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc-eeeccChhhHHHHHHHHCCCCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DD-AFNYKEETDLKAALKRYFPDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~-~~~~~~~~~~~~~~~~~~~~~~d~v 112 (228)
+|.+|||+||+|.+|..+++.+...|.+|++++++........+.++. .. ..|..+.+++.+.+.+ .++|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEE
Confidence 578999999999999999999999999999998765543222112221 11 1233333233333322 168999
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+++++
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99886
No 379
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.31 E-value=0.0016 Score=51.44 Aligned_cols=75 Identities=13% Similarity=-0.008 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
++.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.. .+..... . +.+.... ..+|+|++|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence 5789999995 9999999998889998 8999999999888776555432 1111111 0 1111111 258999999
Q ss_pred cch
Q 027106 116 VGA 118 (228)
Q Consensus 116 ~g~ 118 (228)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 874
No 380
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.30 E-value=0.0033 Score=49.43 Aligned_cols=114 Identities=20% Similarity=0.133 Sum_probs=70.4
Q ss_pred hhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhh
Q 027106 21 FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETD 96 (228)
Q Consensus 21 ~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~ 96 (228)
...+|+++.-..-..+++|.+||=.| .|.|.+++-.++ +|+ +|++++-.+-..+.+++ ..+... ...... .
T Consensus 145 ~HpTT~lcL~~Le~~~~~g~~vlDvG--cGSGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~~~~-~ 219 (300)
T COG2264 145 THPTTSLCLEALEKLLKKGKTVLDVG--CGSGILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVEL-LVQAKG-F 219 (300)
T ss_pred CChhHHHHHHHHHHhhcCCCEEEEec--CChhHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCch-hhhccc-c
Confidence 34445544322223467999999999 667887777666 577 79999988776666553 223321 000000 0
Q ss_pred HHHHHHHHCCCCccEEEcCcch----hHHHHHHHccccCcEEEEEeeec
Q 027106 97 LKAALKRYFPDGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
........+.+|+|+.+.=. .....+.+.++|+|++++.|...
T Consensus 220 --~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 220 --LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred --cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence 00111122479999977633 26677889999999999999654
No 381
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=97.30 E-value=0.0049 Score=46.49 Aligned_cols=100 Identities=17% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee--------------eccChhhHHHHH
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF--------------NYKEETDLKAAL 101 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~~~~~~~ 101 (228)
+.++.+||+.| .|.|.-++-+|. .|.+|++++.++.-.+.+..+.+..... ..-.. ++.+.
T Consensus 32 ~~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~- 106 (213)
T TIGR03840 32 LPAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFAL- 106 (213)
T ss_pred CCCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCCC-
Confidence 35778999999 677888888875 6999999999999888765344432100 00000 11000
Q ss_pred HHHCCCCccEEEcCcc---------hhHHHHHHHccccCcEEEEEeee
Q 027106 102 KRYFPDGIDIYFDNVG---------AEMQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 102 ~~~~~~~~d~vld~~g---------~~~~~~~~~~l~~~G~~v~~g~~ 140 (228)
.....+.||.|+|+.. ...++.+.++|+|||+++..+..
T Consensus 107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 0000136899999653 12678899999999987776653
No 382
>PRK01581 speE spermidine synthase; Validated
Probab=97.30 E-value=0.0063 Score=49.31 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC--------C--CceeeccChhhHHHHHHHHC
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG--------F--DDAFNYKEETDLKAALKRYF 105 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~~~~~~~~~~ 105 (228)
....+|||.| ||.|.++..+++..+ .+|++++.+++-.+.++ ++. . +.-+...-. |..+.+.. .
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~ 223 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P 223 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence 4456999999 567777777777655 49999999999889888 421 0 111111111 33444443 3
Q ss_pred CCCccEEEcCcc------------hhHHHHHHHccccCcEEEEEe
Q 027106 106 PDGIDIYFDNVG------------AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 106 ~~~~d~vld~~g------------~~~~~~~~~~l~~~G~~v~~g 138 (228)
.+.||+||--.. .+.+..+.+.|+++|.++.-.
T Consensus 224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 347999864321 126678889999999988854
No 383
>PLN03075 nicotianamine synthase; Provisional
Probab=97.30 E-value=0.0047 Score=48.70 Aligned_cols=98 Identities=11% Similarity=-0.006 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHHHHCCCCcc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
.++++|+-.| +|+.|+.++-+++.. +.+++.++.+++..+.+++.+.. ..-+..... +..+... ..++||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~--~l~~FD 197 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTE--SLKEYD 197 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhccc--ccCCcC
Confidence 3788999999 699999888888654 34899999999988888843322 221222222 2222111 124799
Q ss_pred EEEcCc------ch--hHHHHHHHccccCcEEEEEe
Q 027106 111 IYFDNV------GA--EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 111 ~vld~~------g~--~~~~~~~~~l~~~G~~v~~g 138 (228)
+||..+ .. ..+..+.+.|+|||.++.-.
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 998764 22 38889999999999998854
No 384
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0018 Score=51.30 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~ 107 (228)
-++.++||+||+|++|..+++.+...|++|+++.++.+ ..+.+.+ ..|... ..|..+.+.+...+.+... +
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999888888999999887642 2222221 223221 1244433233333333211 3
Q ss_pred CccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeec
Q 027106 108 GIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 108 ~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
++|+++.++|.. ..+.+++.+++.|+++.++...
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 689999887631 1122344556678999888654
No 385
>PRK04457 spermidine synthase; Provisional
Probab=97.29 E-value=0.014 Score=45.53 Aligned_cols=96 Identities=9% Similarity=0.127 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCCCCccEE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFPDGIDIY 112 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v 112 (228)
.++.+||+.| +|.|..+..+++.. +.+|++++.+++-.+.+++.++.. .-+..... |..+.+.+. ++.+|+|
T Consensus 65 ~~~~~vL~IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEEC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence 4567899999 45577888887776 469999999999999998555531 11111112 444444432 3479998
Q ss_pred E-cCcc----------hhHHHHHHHccccCcEEEE
Q 027106 113 F-DNVG----------AEMQEAAIANMNTYGRVAV 136 (228)
Q Consensus 113 l-d~~g----------~~~~~~~~~~l~~~G~~v~ 136 (228)
+ |... .+.++.+.+.|+++|.++.
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 6 3221 2477888999999999987
No 386
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=97.25 E-value=0.0061 Score=47.36 Aligned_cols=97 Identities=14% Similarity=0.177 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
.++.+||-.| +|.|..+..+++. |.+|++++.+++..+.+++.. |...-+..-.. +..+ +.....+.||+|+
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence 5667999988 6778888888775 889999999999888887332 32111111111 2211 2222234799998
Q ss_pred cCcc-----h--hHHHHHHHccccCcEEEEEe
Q 027106 114 DNVG-----A--EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 114 d~~g-----~--~~~~~~~~~l~~~G~~v~~g 138 (228)
.... . ..+..+.+.|+|||.++.+-
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 5432 2 37888999999999998764
No 387
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.24 E-value=0.0026 Score=45.59 Aligned_cols=88 Identities=10% Similarity=0.080 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.|.+|+|.|| |.+|..-++.+...|++|++++ ++..+.+. +++... ...+ .+.+. .-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence 6789999996 9999988888888999999885 44444455 443211 1111 11111 1126899999998
Q ss_pred hhHHHHHHHccccCcEEEEE
Q 027106 118 AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 118 ~~~~~~~~~~l~~~G~~v~~ 137 (228)
.+.....+...+..+.++..
T Consensus 80 d~e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEE
Confidence 87666655555444434443
No 388
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=97.24 E-value=0.039 Score=42.72 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=62.5
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106 34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
....++.+||-.|+ | .|..+..+++ .|.+|++++.+++..+.+++......++.. +... + .+.++.||+|+
T Consensus 38 l~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~ 108 (251)
T PRK10258 38 LPQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAW 108 (251)
T ss_pred cCccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEE
Confidence 34456789999994 3 3655555554 588999999999998888833322222211 1111 0 11223799998
Q ss_pred cCcc-------hhHHHHHHHccccCcEEEEEee
Q 027106 114 DNVG-------AEMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 114 d~~g-------~~~~~~~~~~l~~~G~~v~~g~ 139 (228)
.... ...+..+.+.|+++|.++....
T Consensus 109 s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 109 SNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred ECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 7543 1378888999999999988653
No 389
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.24 E-value=0.0039 Score=49.41 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=35.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHh
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK---EKVTLLKDKL 83 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~---~~~~~~~~~~ 83 (228)
-++++++|.|+ ||+|.+++..+...|+ +|+++.++. ++.+.+.+++
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 35789999997 8999999888888998 599999885 4554444344
No 390
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.24 E-value=0.0059 Score=48.16 Aligned_cols=46 Identities=22% Similarity=0.201 Sum_probs=38.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL 83 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~ 83 (228)
.++++++|.|+ ||.+.+++..+...|+ +|+++.|+.++.+.+.+.+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 45789999996 9999999988888998 8999999998887776444
No 391
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=97.23 E-value=0.016 Score=42.79 Aligned_cols=98 Identities=13% Similarity=0.217 Sum_probs=64.4
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 107 (228)
....+.++++||=.| +|.|..++.+++.. +.+|++++.+++..+.+++ .++...+ ..... +... ...+
T Consensus 25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~-d~~~----~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPG-EAPI----ELPG 96 (187)
T ss_pred HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEec-Cchh----hcCc
Confidence 455678899999998 45577777777765 4699999999988777763 2343322 11111 2111 1123
Q ss_pred CccEEEcCcc----hhHHHHHHHccccCcEEEEE
Q 027106 108 GIDIYFDNVG----AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 108 ~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~ 137 (228)
.+|+|+.... ...+..+.+.|+++|+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 6999985432 13677888999999999774
No 392
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0037 Score=47.31 Aligned_cols=77 Identities=14% Similarity=0.233 Sum_probs=50.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
..++||+||+|++|..++..+... .+|++++++.++.+.+.+......+ .|..+...+.+.+... +++|+++.++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 368999999999999988776666 9999999988776655523321122 2333332333322221 2699999988
Q ss_pred ch
Q 027106 117 GA 118 (228)
Q Consensus 117 g~ 118 (228)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 73
No 393
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.22 E-value=0.0023 Score=51.12 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHC-CCCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYF-PDGI 109 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~-~~~~ 109 (228)
+|.++||+||++++|...++.+...|++|++.+++ ....+.+.+ ..|... ..|..+.+.....+.... .+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999998888889999988764 233322221 223211 123333312222222111 2479
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999998873
No 394
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.21 E-value=0.0053 Score=48.17 Aligned_cols=96 Identities=17% Similarity=0.120 Sum_probs=68.2
Q ss_pred ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106 18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL 97 (228)
Q Consensus 18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 97 (228)
-+||........+....---.|.+|+|.|.+..+|.-++.++...|++|+++.+... ++
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 456666666666644332358999999998666999999999999999998885421 22
Q ss_pred HHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeec
Q 027106 98 KAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 98 ~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
.+.++ ..|+|+.++|.+ .+.. +.++++..++.+|.+.
T Consensus 196 ~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 22222 379999999976 4443 4688888888888754
No 395
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.20 E-value=0.0055 Score=49.19 Aligned_cols=89 Identities=21% Similarity=0.188 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
-.|+++-|.| .|.+|.+.++.++..|++|+..++++. .+..+ +.+..++ ++.+.+.+ .|++.-..
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHC 208 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeC
Confidence 3588999999 699999999999999999999998765 22222 4444432 22223332 68876555
Q ss_pred c-hh-----HHHHHHHccccCcEEEEEeee
Q 027106 117 G-AE-----MQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 117 g-~~-----~~~~~~~~l~~~G~~v~~g~~ 140 (228)
+ .+ .-...+..|++++.+|.++..
T Consensus 209 Plt~~T~hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence 4 22 335678899999999998753
No 396
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.20 E-value=0.0024 Score=49.30 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=49.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGID 110 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d 110 (228)
.++||+|++|++|..+++.+...|++|++++++. +..+...+. .+.. . ..|..+..++...+.+... +++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999988888899999988653 222222112 2221 1 2344443233333333321 3689
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
+++.++|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99998763
No 397
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.20 E-value=0.0041 Score=48.85 Aligned_cols=74 Identities=23% Similarity=0.297 Sum_probs=46.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC----CCce--------eeccChhhHHHHHHHHCCC-
Q 027106 42 VFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLG----FDDA--------FNYKEETDLKAALKRYFPD- 107 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~~--------~~~~~~~~~~~~~~~~~~~- 107 (228)
|||+||+|++|..+++-+...+. +++++++++.++-.++.++. ...+ -|..+ .+.+.+....
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd----~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD----KERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH----HHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC----HHHHHHHHhhc
Confidence 79999999999998877777776 89999999888777665662 1111 12322 3344555554
Q ss_pred CccEEEcCcchh
Q 027106 108 GIDIYFDNVGAE 119 (228)
Q Consensus 108 ~~d~vld~~g~~ 119 (228)
++|+||.++.-.
T Consensus 77 ~pdiVfHaAA~K 88 (293)
T PF02719_consen 77 KPDIVFHAAALK 88 (293)
T ss_dssp T-SEEEE-----
T ss_pred CCCEEEEChhcC
Confidence 899999987743
No 398
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.19 E-value=0.0037 Score=48.76 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=48.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhC----CCc---eeeccChhhH----HHHHHHHC--
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKLG----FDD---AFNYKEETDL----KAALKRYF-- 105 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~g----~~~---~~~~~~~~~~----~~~~~~~~-- 105 (228)
.+++|+||++++|...++.+...|++|+++.+ ++++.+.+.+++. ... ..|..+.+.. .+.+....
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 47899999999999999988889999998764 3444443332332 111 1244433121 11222211
Q ss_pred CCCccEEEcCcc
Q 027106 106 PDGIDIYFDNVG 117 (228)
Q Consensus 106 ~~~~d~vld~~g 117 (228)
-+++|++++++|
T Consensus 82 ~g~iD~lv~nAG 93 (267)
T TIGR02685 82 FGRCDVLVNNAS 93 (267)
T ss_pred cCCceEEEECCc
Confidence 136999999887
No 399
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.17 E-value=0.0033 Score=48.29 Aligned_cols=81 Identities=21% Similarity=0.254 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
++.++||+||+|++|..++..+...|++|+++.+ ++++.+...+. .+... -.|..+...+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999888888999887654 34443333212 23211 1244433233333333222 35
Q ss_pred ccEEEcCcch
Q 027106 109 IDIYFDNVGA 118 (228)
Q Consensus 109 ~d~vld~~g~ 118 (228)
+|+++.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 400
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.17 E-value=0.0059 Score=44.19 Aligned_cols=97 Identities=20% Similarity=0.124 Sum_probs=63.5
Q ss_pred hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChh
Q 027106 17 GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGS-VGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEET 95 (228)
Q Consensus 17 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~-~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 95 (228)
...||....+...+.....--.|.+|+|.|+ |. +|..++..+...|++|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4456666666666655544568999999996 66 599899999999999888886532
Q ss_pred hHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106 96 DLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 96 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+..+.+. .+|+||.+++.+.+ ---+.++++-.++.++.+.
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 1122222 27888888887422 1123456665666676543
No 401
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.0033 Score=48.17 Aligned_cols=80 Identities=25% Similarity=0.302 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKD---KLGFD-D--AFNYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~ 108 (228)
+..+|||+||+|++|..+++.+...|.+|+++.++.. ..+.+.. ..+.. . ..|..+.+++.+.+.+... ++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 3569999999999999999999999999877665433 3222221 22221 1 1344443233333333211 36
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
+|+++.++|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 999999886
No 402
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.16 E-value=0.0056 Score=43.55 Aligned_cols=95 Identities=22% Similarity=0.221 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
.++.+++|+|+ |++|...++.+...| .+|++++++.++.+.+.++++... ..... +..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhc-----cccCCEEEe
Confidence 55789999996 999999998888886 689999999887776554666431 01111 11111 136899999
Q ss_pred CcchhHH-----HHHHHccccCcEEEEEeee
Q 027106 115 NVGAEMQ-----EAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 115 ~~g~~~~-----~~~~~~l~~~G~~v~~g~~ 140 (228)
|++.... ......++++..++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9876431 1112345677777777543
No 403
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.16 E-value=0.0045 Score=49.85 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCc--e--eeccChhhHHHHHHHHCCCCccE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDD--A--FNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
+|.+|||+||+|.+|..+++.+...| .+|++++++..+...+.+.+.... + .|..+.+.+.+.+ +++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-----~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-----RGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-----hcCCE
Confidence 47899999999999999888777665 689888876655443332332211 1 2444331222222 14899
Q ss_pred EEcCcc
Q 027106 112 YFDNVG 117 (228)
Q Consensus 112 vld~~g 117 (228)
||++++
T Consensus 78 Vih~Ag 83 (324)
T TIGR03589 78 VVHAAA 83 (324)
T ss_pred EEECcc
Confidence 999876
No 404
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.16 E-value=0.0018 Score=55.25 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=53.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
.+.+|++|+|+|. |..|++++++++..|++|++++.++.+.+.++ +.|+.. +.... ..+.+. .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~-~~~~~---~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVAT-VSTSD---AVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEE-EcCcc---hHhHhh-----cCCEEEE
Confidence 3568899999994 99999999999999999999998777666666 677633 22211 111221 3789998
Q ss_pred Ccch
Q 027106 115 NVGA 118 (228)
Q Consensus 115 ~~g~ 118 (228)
+.|-
T Consensus 77 SpGi 80 (488)
T PRK03369 77 SPGF 80 (488)
T ss_pred CCCC
Confidence 8774
No 405
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0029 Score=48.99 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HhCCC-c--eeeccChhhHHHHHHHHCC-
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS----KEKVTLLKD---KLGFD-D--AFNYKEETDLKAALKRYFP- 106 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~----~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~~~~~~~- 106 (228)
.+.++||+|++|++|..+++.+...|++|++++++ .+..+.+.+ ..+.. . .+|..+.++..+.+.+...
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46799999999999999999888889987766532 222222221 22322 1 2344443233333333221
Q ss_pred -CCccEEEcCcch
Q 027106 107 -DGIDIYFDNVGA 118 (228)
Q Consensus 107 -~~~d~vld~~g~ 118 (228)
+++|++++++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 368999998873
No 406
>PRK08317 hypothetical protein; Provisional
Probab=97.16 E-value=0.0049 Score=47.04 Aligned_cols=101 Identities=20% Similarity=0.247 Sum_probs=67.4
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh--CCCceeeccChhhHHHHHHHHCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL--GFDDAFNYKEETDLKAALKRYFPD 107 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 107 (228)
....+.++++||..|+ | .|..+..+++..+ .++++++.++...+.++ +. .....+..... +... ..+..+
T Consensus 13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~-~~~~~~~~~~~~~~~-d~~~--~~~~~~ 86 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAK-ERAAGLGPNVEFVRG-DADG--LPFPDG 86 (241)
T ss_pred HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HHhhCCCCceEEEec-cccc--CCCCCC
Confidence 5578899999999994 4 4888888888773 59999999999888887 43 11111111111 1110 011234
Q ss_pred CccEEEcCc-----ch--hHHHHHHHccccCcEEEEEe
Q 027106 108 GIDIYFDNV-----GA--EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 108 ~~d~vld~~-----g~--~~~~~~~~~l~~~G~~v~~g 138 (228)
.+|+|+... .. ..+..+.++|+++|.++...
T Consensus 87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 87 SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 799887532 22 37888999999999998865
No 407
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=97.14 E-value=0.0095 Score=46.31 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=66.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
....+.++++||-.| .|.|..+..+++.. +.+|++++.++...+.+++.+....++.. +.... ...+.+|
T Consensus 25 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~~---~~~~~fD 95 (258)
T PRK01683 25 ARVPLENPRYVVDLG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIASW---QPPQALD 95 (258)
T ss_pred hhCCCcCCCEEEEEc--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhcc---CCCCCcc
Confidence 445678899999999 55677778888776 46999999999988888733322222221 22111 1123799
Q ss_pred EEEcCcc-----h--hHHHHHHHccccCcEEEEE
Q 027106 111 IYFDNVG-----A--EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 111 ~vld~~g-----~--~~~~~~~~~l~~~G~~v~~ 137 (228)
+|+.... . ..+..+.+.|++||.++..
T Consensus 96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 9976433 1 3788899999999999885
No 408
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.005 Score=47.30 Aligned_cols=80 Identities=16% Similarity=0.203 Sum_probs=49.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DGI 109 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 109 (228)
+.++||+|++|++|...++.+...|++|+.+. +++++.+.+.+ ..+... ..|..+.+.+...+.+... +.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999988888899887765 44444333321 223321 1244443234443333222 368
Q ss_pred cEEEcCcch
Q 027106 110 DIYFDNVGA 118 (228)
Q Consensus 110 d~vld~~g~ 118 (228)
|++++++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998863
No 409
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.13 E-value=0.0031 Score=47.19 Aligned_cols=92 Identities=9% Similarity=0.023 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
.|.+|||.|| |.+|...++.+...|++|++++.... .+..+. .-+... .... .+... . -.++|+|+-++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i~-~~~~---~~~~~--~--l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKIR-WKQK---EFEPS--D--IVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCEE-EEec---CCChh--h--cCCceEEEEcC
Confidence 5789999996 99999988888889999998875421 222222 112111 1111 11110 0 12689999999
Q ss_pred chhHHHHHHHccccCcEEEEEee
Q 027106 117 GAEMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 117 g~~~~~~~~~~l~~~G~~v~~g~ 139 (228)
+.+.....+...+..+.++....
T Consensus 79 ~d~elN~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 79 NDPRVNEQVKEDLPENALFNVIT 101 (202)
T ss_pred CCHHHHHHHHHHHHhCCcEEECC
Confidence 88755555554444456666543
No 410
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0037 Score=47.48 Aligned_cols=74 Identities=15% Similarity=0.180 Sum_probs=50.6
Q ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-Cce--eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 43 FVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--GF-DDA--FNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 43 lI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
||+||+|++|...++.+...|++|+++++++++.+.+.+.+ +. ..+ .|..+.+.+.+.+.+. +++|++++++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999888889999999999877765544233 22 111 3444442444434332 36899999886
Q ss_pred h
Q 027106 118 A 118 (228)
Q Consensus 118 ~ 118 (228)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 3
No 411
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.12 E-value=0.0032 Score=48.41 Aligned_cols=78 Identities=21% Similarity=0.164 Sum_probs=48.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+++||+||+|++|..+++.+...|++|+++. +++++.+.+.+ ..+... ..|..+..+..+.+.+.. -+++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999998888899887764 45444433321 223211 123333323433333322 13689
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+++.++|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9998886
No 412
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.12 E-value=0.0022 Score=51.10 Aligned_cols=38 Identities=11% Similarity=0.256 Sum_probs=32.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 027106 38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSKEKV 76 (228)
Q Consensus 38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~ 76 (228)
.|+++||+|+ ++|+|.+.++.+...|++|++ .++..++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 6899999999 799999999999999999988 4443433
No 413
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=97.12 E-value=0.0079 Score=46.91 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=66.5
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC------CCceeeccChhhHHHHHHHH
Q 027106 33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLG------FDDAFNYKEETDLKAALKRY 104 (228)
Q Consensus 33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~ 104 (228)
..++.++++||-.| .|.|..+..+++..+ .+|++++.+++.++.++++.. ...+ ..... +.. .+ .+
T Consensus 68 ~~~~~~~~~VLDlG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~-d~~-~l-p~ 141 (261)
T PLN02233 68 WSGAKMGDRVLDLC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG-DAT-DL-PF 141 (261)
T ss_pred HhCCCCCCEEEEEC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc-ccc-cC-CC
Confidence 35678899999998 455667777787765 499999999998888873332 1111 11111 111 00 11
Q ss_pred CCCCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEeee
Q 027106 105 FPDGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 105 ~~~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 140 (228)
.++.||+|+...+ . ..++++.+.|+|||+++.+...
T Consensus 142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 1236999975432 1 3788999999999999987643
No 414
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0069 Score=44.99 Aligned_cols=87 Identities=17% Similarity=0.209 Sum_probs=54.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE- 119 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~- 119 (228)
+++|+|+++++|..++..+... .+|+++++++.. ..+|..+.++....+.+. +++|++++++|..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~ 67 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKV--GKVDAVVSAAGKVH 67 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence 6899999999999888766655 889998876421 123444432333333332 3688888877631
Q ss_pred -------------------------HHHHHHHccccCcEEEEEeeec
Q 027106 120 -------------------------MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 120 -------------------------~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
..+.+.+.+.++|+++.++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 1122334556678888877644
No 415
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.044 Score=40.07 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=54.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Cc--e--eeccChhhHHHHHHHHC--CCCccEEE
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DD--A--FNYKEETDLKAALKRYF--PDGIDIYF 113 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~--~--~~~~~~~~~~~~~~~~~--~~~~d~vl 113 (228)
+++|+||+ ++|..+++.+...|++|+++++++++.+.+...++. .. . .|..+..+....+.... .+++|++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 68999986 566566666667899999999988777665523432 11 1 35555434444444332 23789999
Q ss_pred cCcchhHHHHHHHcccc
Q 027106 114 DNVGAEMQEAAIANMNT 130 (228)
Q Consensus 114 d~~g~~~~~~~~~~l~~ 130 (228)
+..-...-+......+.
T Consensus 81 ~~vh~~~~~~~~~~~~~ 97 (177)
T PRK08309 81 AWIHSSAKDALSVVCRE 97 (177)
T ss_pred EeccccchhhHHHHHHH
Confidence 88765433333344433
No 416
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=97.11 E-value=0.0039 Score=42.04 Aligned_cols=96 Identities=20% Similarity=0.194 Sum_probs=61.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
|.+||-.| .|.|..++.+++....++++++.++...+.++..+ +.+.-+..... ++.+.......+.+|+|+-+
T Consensus 1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n 77 (117)
T PF13659_consen 1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN 77 (117)
T ss_dssp TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence 56788877 45566666666655579999999999988887433 22111222222 55444434444589999863
Q ss_pred cch---------------hHHHHHHHccccCcEEEEE
Q 027106 116 VGA---------------EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 116 ~g~---------------~~~~~~~~~l~~~G~~v~~ 137 (228)
..- ..+..+.+.|+++|.++.+
T Consensus 78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 321 2477889999999999875
No 417
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.10 E-value=0.0027 Score=52.51 Aligned_cols=106 Identities=20% Similarity=0.212 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHh-CCCc-eeeccChhhHHHHHHHHCC
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT------LLKDKL-GFDD-AFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~------~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~ 106 (228)
+-..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+ ...+.. +... ..|..+.+.+...+... .
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~ 134 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-G 134 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-C
Confidence 3456779999999999999999988888999999998765421 111011 2222 23444442344444332 1
Q ss_pred CCccEEEcCcchh------H-------HHHHHHccccC--cEEEEEeeec
Q 027106 107 DGIDIYFDNVGAE------M-------QEAAIANMNTY--GRVAVCGVIS 141 (228)
Q Consensus 107 ~~~d~vld~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~ 141 (228)
+++|+|++|++.. . ...+++.+... +++|.++...
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 1699999987631 1 12334444333 4788887643
No 418
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.10 E-value=0.004 Score=47.74 Aligned_cols=79 Identities=13% Similarity=0.121 Sum_probs=50.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+++||+||+|++|...++.+...|++|+++ .+++++.+.... ..+.. ...|..+.+.+...+.+.. .+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 479999999999999998888889998764 455554433321 22321 1234444424444444332 24799
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99998873
No 419
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.09 E-value=0.0031 Score=47.29 Aligned_cols=92 Identities=17% Similarity=0.124 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
.|.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.|--..+. .+ +... .+ .++|+|+-++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~---~~~~--dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RC---FDAD--IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CC---CCHH--Hh--CCcEEEEECC
Confidence 5789999996 99999999999999999999885432 333333 333211111 11 1111 11 2689999988
Q ss_pred chh-HHHHHHHccccCcEEEEEee
Q 027106 117 GAE-MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 117 g~~-~~~~~~~~l~~~G~~v~~g~ 139 (228)
+.+ .-..+....+..|..+.+..
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEECC
Confidence 875 54555566666777776543
No 420
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.09 E-value=0.0056 Score=49.38 Aligned_cols=94 Identities=10% Similarity=0.080 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHh----CCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYA-KLFGC-YVVGSAGSKEKVTLLKDKL----GFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
....+++|+| +|++|...+..+ ...++ +|.++++++++.+.+.+++ +.. +.... +..+.+. ..|
T Consensus 125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 3567899999 599998777554 45676 8889999988877665443 332 22222 3333332 489
Q ss_pred EEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106 111 IYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 111 ~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+|+.|++....... +++++|-++..+|...
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 99999987422223 8889999999998754
No 421
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.09 E-value=0.004 Score=50.83 Aligned_cols=81 Identities=15% Similarity=0.104 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCH--HH-------------H-HHHHHHhCCCc-e--eeccChh
Q 027106 37 KKGEKVFVSAASGSVGHL--VGQYAKLFGCYVVGSAGSK--EK-------------V-TLLKDKLGFDD-A--FNYKEET 95 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~--a~~~a~~~g~~V~~~~~~~--~~-------------~-~~~~~~~g~~~-~--~~~~~~~ 95 (228)
..|+++||+|+++++|++ .++.+ ..|++|++++... .+ . +.++ +.|... . .|..+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 456899999999999999 55666 8899888877322 11 2 2333 556431 1 2444432
Q ss_pred hHHHHHHHHCC--CCccEEEcCcchh
Q 027106 96 DLKAALKRYFP--DGIDIYFDNVGAE 119 (228)
Q Consensus 96 ~~~~~~~~~~~--~~~d~vld~~g~~ 119 (228)
.....+.+... |++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 33333333222 4799999988754
No 422
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=97.07 E-value=0.0058 Score=46.64 Aligned_cols=102 Identities=13% Similarity=0.143 Sum_probs=66.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
....+++|++||-.| .|.|..+..+++..+ .+|++++.+++..+.+++.+ +.+.+ ..-.. +... + ....
T Consensus 39 ~~l~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~-~-~~~~ 112 (231)
T TIGR02752 39 KRMNVQAGTSALDVC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNV-ELVHG-NAME-L-PFDD 112 (231)
T ss_pred HhcCCCCCCEEEEeC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEEe-chhc-C-CCCC
Confidence 456778999999998 566777778887764 59999999998887777433 22221 11111 1111 0 1122
Q ss_pred CCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106 107 DGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 107 ~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 139 (228)
+.+|+|+-+.. . ..+..+.+.|++||+++....
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 113 NSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 37999875322 1 367788999999999987653
No 423
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.06 E-value=0.0055 Score=47.50 Aligned_cols=43 Identities=28% Similarity=0.291 Sum_probs=33.4
Q ss_pred EEEEEcCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHh
Q 027106 41 KVFVSAASGSVGHLVGQYAKL----FGCYVVGSAGSKEKVTLLKDKL 83 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~----~g~~V~~~~~~~~~~~~~~~~~ 83 (228)
.++|+||++++|..++..+.. .|++|+.+.+++++.+.+.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 589999999999887754433 6899999999888776655343
No 424
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.06 E-value=0.007 Score=48.39 Aligned_cols=89 Identities=19% Similarity=0.277 Sum_probs=61.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.+|.|+| .|.+|...++.++..|. +|+++++++++.+.++ +.|...... . +..+.+ ...|+|+.|+.
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~-~---~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT-T---SAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec-C---CHHHHh-----cCCCEEEECCC
Confidence 5899999 59999999998888884 8999999998888887 777532111 1 111112 24799999988
Q ss_pred hhH----HHHHHHccccCcEEEEEee
Q 027106 118 AEM----QEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 118 ~~~----~~~~~~~l~~~G~~v~~g~ 139 (228)
... +......++++..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 643 3334455667776666664
No 425
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=97.06 E-value=0.0042 Score=46.20 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=62.0
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 108 (228)
......++.+||-.| .|.|..+..+++ .|.+|++++.++...+.+++. .+.. +..... +... ... ++.
T Consensus 24 ~~~~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~--~~~-~~~ 94 (195)
T TIGR00477 24 EAVKTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA--AAL-NED 94 (195)
T ss_pred HHhccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh--ccc-cCC
Confidence 444455667999998 567777777776 488999999998877766522 2322 111111 1110 011 236
Q ss_pred ccEEEcCc-----ch----hHHHHHHHccccCcEEEEEee
Q 027106 109 IDIYFDNV-----GA----EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 109 ~d~vld~~-----g~----~~~~~~~~~l~~~G~~v~~g~ 139 (228)
+|+|+.+. .. ..+..+.++|+|||.++.+..
T Consensus 95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 99987542 11 377788899999999666543
No 426
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=97.06 E-value=0.01 Score=44.91 Aligned_cols=99 Identities=16% Similarity=0.060 Sum_probs=63.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--------------eeccChhhHHHH
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--------------FNYKEETDLKAA 100 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~ 100 (228)
.+.++.+||+.| .|.|.-++-+|. .|++|++++.++...+.+..+.+.... +..-.. ++.+.
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence 446778999999 678888888875 799999999999888876434443211 000000 11100
Q ss_pred HHHHCCCCccEEEcCcc---------hhHHHHHHHccccCcEEEEEe
Q 027106 101 LKRYFPDGIDIYFDNVG---------AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 101 ~~~~~~~~~d~vld~~g---------~~~~~~~~~~l~~~G~~v~~g 138 (228)
.....+.||.|+|... ...++.+.++|+|||+++++.
T Consensus 110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 0001136899998553 126788899999998755543
No 427
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.06 E-value=0.0055 Score=48.46 Aligned_cols=96 Identities=22% Similarity=0.275 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceee-ccChhhHHHHHHHHCCCCcc
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFN-YKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d 110 (228)
..+|++||=.| .|.|.+++-.++ +|+ +|++++.++...+.+++ ..|....+. .... + ...+.||
T Consensus 159 ~~~g~~vLDvG--~GSGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~-------~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVG--CGSGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-D-------LVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES---TTSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-C-------TCCS-EE
T ss_pred ccCCCEEEEeC--CcHHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-c-------cccccCC
Confidence 67899999999 566777666666 487 89999988876666653 233322221 1111 1 1124799
Q ss_pred EEEcCcchh----HHHHHHHccccCcEEEEEeeecc
Q 027106 111 IYFDNVGAE----MQEAAIANMNTYGRVAVCGVISE 142 (228)
Q Consensus 111 ~vld~~g~~----~~~~~~~~l~~~G~~v~~g~~~~ 142 (228)
+|+-+.-.+ ....+.++++++|.+++.|....
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 999777654 55556678999999999998653
No 428
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0042 Score=47.68 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=48.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHH-----HCC-CCccE
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKR-----YFP-DGIDI 111 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~-----~~~-~~~d~ 111 (228)
++||+||+|++|..+++.+...|++|++++++.++ +... ..+... ..|..+.+++...+.+ +.. ++.|+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 79999999999999998888889999999877554 2222 334211 2344444233332222 122 26888
Q ss_pred EEcCcc
Q 027106 112 YFDNVG 117 (228)
Q Consensus 112 vld~~g 117 (228)
+++++|
T Consensus 81 ~v~~ag 86 (243)
T PRK07023 81 LINNAG 86 (243)
T ss_pred EEEcCc
Confidence 888766
No 429
>PRK00536 speE spermidine synthase; Provisional
Probab=97.04 E-value=0.0037 Score=48.51 Aligned_cols=96 Identities=13% Similarity=-0.026 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-hCC-CceeeccChhhHHHHHHHHCCCCccEEE-
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK-LGF-DDAFNYKEETDLKAALKRYFPDGIDIYF- 113 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vl- 113 (228)
...++|||.| ||=|.++=.++|+-. +|+.++-+++-.+.++ + +.. ...++.... .+...+.+...+.||+||
T Consensus 71 ~~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k-~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIv 145 (262)
T PRK00536 71 KELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFI-SFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIIC 145 (262)
T ss_pred CCCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHH-HHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEE
Confidence 4458999999 666777788888864 9999999998888888 5 321 111221111 222233333334799965
Q ss_pred cCcch-hHHHHHHHccccCcEEEEE
Q 027106 114 DNVGA-EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 114 d~~g~-~~~~~~~~~l~~~G~~v~~ 137 (228)
|.+-. +.+..+.++|+++|.++.=
T Consensus 146 Ds~~~~~fy~~~~~~L~~~Gi~v~Q 170 (262)
T PRK00536 146 LQEPDIHKIDGLKRMLKEDGVFISV 170 (262)
T ss_pred cCCCChHHHHHHHHhcCCCcEEEEC
Confidence 64544 5778889999999999984
No 430
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=97.04 E-value=0.015 Score=45.16 Aligned_cols=95 Identities=16% Similarity=0.178 Sum_probs=66.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
....+.++++||-.| .|.|..+..+++.. +.+|++++.++...+.++ +.+.+. +. . +..+ + ...+.||
T Consensus 23 ~~l~~~~~~~vLDlG--cG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~-~~---~-d~~~-~--~~~~~fD 91 (255)
T PRK14103 23 ARVGAERARRVVDLG--CGPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDA-RT---G-DVRD-W--KPKPDTD 91 (255)
T ss_pred HhCCCCCCCEEEEEc--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcE-EE---c-Chhh-C--CCCCCce
Confidence 456678899999999 45577777887765 679999999999888887 554432 21 1 2211 1 1123799
Q ss_pred EEEcCcc-----h--hHHHHHHHccccCcEEEEE
Q 027106 111 IYFDNVG-----A--EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 111 ~vld~~g-----~--~~~~~~~~~l~~~G~~v~~ 137 (228)
+|+.... . ..+..+.+.|+|||+++..
T Consensus 92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 9987443 1 3778889999999999874
No 431
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.03 E-value=0.0034 Score=50.48 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK 75 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~ 75 (228)
.|.+|||+||+|.+|..+++.+...|++|++++++.++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~ 41 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD 41 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 47899999999999999999888899999888766554
No 432
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.03 E-value=0.012 Score=48.01 Aligned_cols=95 Identities=14% Similarity=0.102 Sum_probs=62.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHhCCCceeeccChhhHHHHHH-------------
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLF--GCYVVGSA--GSKEKVTLLKDKLGFDDAFNYKEETDLKAALK------------- 102 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------- 102 (228)
++|.|.|+||++|..+++..+.. ..+|++.+ ++.+++....++++...++..++ .....++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 57999999999999999988765 45887765 45556555554888876654442 2122222
Q ss_pred -----HHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEE
Q 027106 103 -----RYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAV 136 (228)
Q Consensus 103 -----~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~ 136 (228)
++... .+|+|+.+.++ ..+.-.+.+++.|-++.+
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 22222 58999998876 466667777766655544
No 433
>PRK14967 putative methyltransferase; Provisional
Probab=97.02 E-value=0.028 Score=42.71 Aligned_cols=97 Identities=22% Similarity=0.158 Sum_probs=63.5
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCC
Q 027106 33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 108 (228)
...++++++||-.|+ |. |..++.+++. ++ +|++++.++...+.+++ ..+....+.. . ++.+.+ ..+.
T Consensus 31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~-d~~~~~---~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--G-DWARAV---EFRP 101 (223)
T ss_pred hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--C-chhhhc---cCCC
Confidence 356788999999994 44 8888888875 65 99999999988876663 2333211111 1 332221 2247
Q ss_pred ccEEEcCcc----------------------------hhHHHHHHHccccCcEEEEEe
Q 027106 109 IDIYFDNVG----------------------------AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 109 ~d~vld~~g----------------------------~~~~~~~~~~l~~~G~~v~~g 138 (228)
||+|+.+.+ ...+..+.+.|+++|+++.+-
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999986521 013456778999999998763
No 434
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=97.01 E-value=0.0042 Score=46.80 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=63.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 108 (228)
...+++++++||-.| .|.|..+..+++.. .+|+.++.+++..+.+++. +|...+ +.... +..+... ..+.
T Consensus 72 ~~l~~~~~~~VLeiG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~~~ 144 (212)
T PRK00312 72 ELLELKPGDRVLEIG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHG-DGWKGWP--AYAP 144 (212)
T ss_pred HhcCCCCCCEEEEEC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEEC-CcccCCC--cCCC
Confidence 457789999999998 44566666666654 4899999998877777643 343321 11111 2111110 1137
Q ss_pred ccEEEcCcc-hhHHHHHHHccccCcEEEEEe
Q 027106 109 IDIYFDNVG-AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 109 ~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g 138 (228)
||+|+.... ........+.|+++|+++..-
T Consensus 145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 145 FDRILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred cCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 999876443 345667789999999988743
No 435
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=97.01 E-value=0.019 Score=39.44 Aligned_cols=93 Identities=17% Similarity=0.180 Sum_probs=53.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcC--CEEEEEe--CCHHHHHHHHHHhCCCceeeccCh--hhHHHH---------------
Q 027106 42 VFVSAASGSVGHLVGQYAKLFG--CYVVGSA--GSKEKVTLLKDKLGFDDAFNYKEE--TDLKAA--------------- 100 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~--~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~--------------- 100 (228)
|.|.|+||++|..+.++.+... .+|++.+ ++-+.+....++|.+..++..++. +.+...
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 6789999999999999999987 4787655 343444333327887776554432 011111
Q ss_pred -HHHHCC-CCccEEEcCcch-hHHHHHHHccccCcEE
Q 027106 101 -LKRYFP-DGIDIYFDNVGA-EMQEAAIANMNTYGRV 134 (228)
Q Consensus 101 -~~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~ 134 (228)
+.+... ..+|+|+.+..+ ..+.-.+..++.+=++
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~i 117 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDI 117 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeE
Confidence 112222 267887776644 5666666666655443
No 436
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.99 E-value=0.0051 Score=47.67 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHH----HHHHhCCCc---eeeccChhh
Q 027106 37 KKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS-----------KEKVTL----LKDKLGFDD---AFNYKEETD 96 (228)
Q Consensus 37 ~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~-----------~~~~~~----~~~~~g~~~---~~~~~~~~~ 96 (228)
-+|.++||+||+ +++|...+..+...|++|++++++ .++... ++ +.|... ..|..+.++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHH
Confidence 357899999997 489999998888899999887522 121111 22 334321 134444334
Q ss_pred HHHHHHHHCC--CCccEEEcCcc
Q 027106 97 LKAALKRYFP--DGIDIYFDNVG 117 (228)
Q Consensus 97 ~~~~~~~~~~--~~~d~vld~~g 117 (228)
..+.+.+... +.+|+++.++|
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag 105 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAA 105 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCC
Confidence 4444443322 36899998876
No 437
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0052 Score=47.14 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG----SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF-- 105 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~----~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~-- 105 (228)
++.++||+||+|++|...++.+...|++|+++.+ +.+..+.+.++ .+... ..|..+.+.....+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999888889999988654 33333333212 22221 123333323333332221
Q ss_pred CCCccEEEcCcch
Q 027106 106 PDGIDIYFDNVGA 118 (228)
Q Consensus 106 ~~~~d~vld~~g~ 118 (228)
.+++|+++.++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 1368999998873
No 438
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.97 E-value=0.018 Score=37.27 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=57.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFG---CYVVGS-AGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
+|.|.| +|.+|.+.++-....| .+|+.+ .+++++.+.+.++++...... +..+.+.+ .|+||-|+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence 577888 5999999998888888 789855 999999988875777533221 22223332 69999999
Q ss_pred chhHHHHHHHcc---ccCcEEEEE
Q 027106 117 GAEMQEAAIANM---NTYGRVAVC 137 (228)
Q Consensus 117 g~~~~~~~~~~l---~~~G~~v~~ 137 (228)
....+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 876665555544 345555543
No 439
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.97 E-value=0.008 Score=48.97 Aligned_cols=45 Identities=18% Similarity=0.159 Sum_probs=37.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106 35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL 79 (228)
Q Consensus 35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~ 79 (228)
+-..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+.+
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 50 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHL 50 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence 345678999999999999999999888999999988876654443
No 440
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.95 E-value=0.0078 Score=49.75 Aligned_cols=91 Identities=21% Similarity=0.199 Sum_probs=57.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHHhCCC----ceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 42 VFVSAASGSVGHLVGQYAKLFG-C-YVVGSAGSKEKVTLLKDKLGFD----DAFNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g-~-~V~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
|+|.|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++... ..+|..+.++ +.++.. +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence 789998 999999998888766 4 8999999999988776332221 1234443312 333322 36999999
Q ss_pred cchh-HHHHHHHccccCcEEEEEe
Q 027106 116 VGAE-MQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 116 ~g~~-~~~~~~~~l~~~G~~v~~g 138 (228)
+|.. ...-+-.|+..+-.++..+
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred CccchhHHHHHHHHHhCCCeeccc
Confidence 9875 4444555777788888843
No 441
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.94 E-value=0.0053 Score=48.40 Aligned_cols=95 Identities=8% Similarity=0.090 Sum_probs=61.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC-CC-ccEEEcCcc
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP-DG-IDIYFDNVG 117 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~-~~-~d~vld~~g 117 (228)
+|||+||+|.+|..+++.+...|.+|.+.++++++.. ..+... ..|..+...+...++.... .+ +|.++.+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999988888999999999876532 223322 2455554244444432211 25 899987765
Q ss_pred h-----hHHHHHHHccccCc--EEEEEee
Q 027106 118 A-----EMQEAAIANMNTYG--RVAVCGV 139 (228)
Q Consensus 118 ~-----~~~~~~~~~l~~~G--~~v~~g~ 139 (228)
. .....+++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 3 13334555555444 7887765
No 442
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.94 E-value=0.0021 Score=52.01 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK 73 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~ 73 (228)
++.+|||+||+|.+|..+++.+...|.+|++++++.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence 467999999999999999999998999999988654
No 443
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.93 E-value=0.0053 Score=47.52 Aligned_cols=35 Identities=20% Similarity=0.101 Sum_probs=30.0
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 027106 38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS 72 (228)
Q Consensus 38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~ 72 (228)
.+.++||+||+ |++|...+..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 46789999997 489999888887889999999876
No 444
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.93 E-value=0.008 Score=50.47 Aligned_cols=44 Identities=23% Similarity=0.377 Sum_probs=36.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCC
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGF 85 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~ 85 (228)
+|.|+||+|.+|.+.+..++..|.+|+++++++++. +.+. ++|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence 689999789999999999999999999999888775 3444 6665
No 445
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.92 E-value=0.007 Score=46.63 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhC-----CCce--eeccC-hhhHHHHHHHHCC-
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLG-----FDDA--FNYKE-ETDLKAALKRYFP- 106 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g-----~~~~--~~~~~-~~~~~~~~~~~~~- 106 (228)
.+.++||+|+++++|.+++..+...|++|+++.++.+. .+.+.+... .... .|.++ .......+.+...
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999988877999998887766543 333331222 1111 34443 3233333333222
Q ss_pred -CCccEEEcCcch
Q 027106 107 -DGIDIYFDNVGA 118 (228)
Q Consensus 107 -~~~d~vld~~g~ 118 (228)
+++|++++++|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 369999998873
No 446
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.92 E-value=0.016 Score=43.25 Aligned_cols=88 Identities=14% Similarity=0.207 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 116 (228)
-+|.+|+|.|. |.+|..+++.+...|++|++++.++++.+.+.+.+|.. .++.. ++ ....+|+++.|+
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l-------~~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EI-------YSVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hh-------ccccCCEEEecc
Confidence 46789999995 99999999999999999999999988877776455643 23221 11 111588888665
Q ss_pred ch-hHHHHHHHccccCcEEEEEe
Q 027106 117 GA-EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 117 g~-~~~~~~~~~l~~~G~~v~~g 138 (228)
.+ ..-...++.++ .+++.-+
T Consensus 94 ~~~~I~~~~~~~l~--~~~v~~~ 114 (200)
T cd01075 94 LGGVINDDTIPQLK--AKAIAGA 114 (200)
T ss_pred cccccCHHHHHHcC--CCEEEEC
Confidence 44 33334445553 4455544
No 447
>PLN02686 cinnamoyl-CoA reductase
Probab=96.91 E-value=0.0082 Score=49.29 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=37.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~ 80 (228)
...+++|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 356789999999999999999998889999998887766554443
No 448
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.91 E-value=0.011 Score=43.40 Aligned_cols=93 Identities=14% Similarity=0.157 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
+|++||-.| .|.|..++.+++.. +.+|++++.+++..+.+++ +.|...+ ..-.. +..+ + ...+.+|+|+
T Consensus 42 ~~~~vLDiG--cGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~-d~~~-~--~~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIG--SGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNG-RAED-F--QHEEQFDVIT 114 (181)
T ss_pred CCCeEEEec--CCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEec-chhh-c--cccCCccEEE
Confidence 488999998 45566666666654 3599999999887666542 3454332 11111 2222 1 1124799988
Q ss_pred cCcc-h--hHHHHHHHccccCcEEEEE
Q 027106 114 DNVG-A--EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 114 d~~g-~--~~~~~~~~~l~~~G~~v~~ 137 (228)
...- . ..++.+.+.|+++|+++..
T Consensus 115 s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 6532 1 3667778999999999876
No 449
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=96.91 E-value=0.0021 Score=41.29 Aligned_cols=82 Identities=21% Similarity=0.239 Sum_probs=53.2
Q ss_pred chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcCcc-----h--h
Q 027106 49 GSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDNVG-----A--E 119 (228)
Q Consensus 49 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-----~--~ 119 (228)
.|.|..+..+++.-+.+|++++.+++..+.+++...... +...+.. ++ .+.++.||+|+.... . .
T Consensus 5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~ 78 (95)
T PF08241_consen 5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA 78 (95)
T ss_dssp -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence 457888888888856799999999999999984443322 2221111 11 112247999986432 1 3
Q ss_pred HHHHHHHccccCcEEEE
Q 027106 120 MQEAAIANMNTYGRVAV 136 (228)
Q Consensus 120 ~~~~~~~~l~~~G~~v~ 136 (228)
.+.++.+.|+|+|+++.
T Consensus 79 ~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 79 ALREIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCcCeEEeC
Confidence 78999999999999874
No 450
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.91 E-value=0.0078 Score=43.29 Aligned_cols=80 Identities=21% Similarity=0.196 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec-cChhhHHHHHHHHCCC-CccEEEcC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-KEETDLKAALKRYFPD-GIDIYFDN 115 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~d~vld~ 115 (228)
.|..|+++|+.-|+|...++-+...|++|+++.++++.+..+- +.-...+... -+..++....+.+.+- .+|..+++
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 6889999999889999999999999999999999999887776 3333222211 1111333223333332 56777666
Q ss_pred cch
Q 027106 116 VGA 118 (228)
Q Consensus 116 ~g~ 118 (228)
+|-
T Consensus 85 Agv 87 (245)
T KOG1207|consen 85 AGV 87 (245)
T ss_pred chh
Confidence 663
No 451
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.90 E-value=0.0091 Score=45.69 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=47.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhC---CC-c--eeeccChhhHHHHHHHHC--CCCcc
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLG---FD-D--AFNYKEETDLKAALKRYF--PDGID 110 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g---~~-~--~~~~~~~~~~~~~~~~~~--~~~~d 110 (228)
+++||+|++|++|..+++.+...|++|++++++.. ......+.++ .. . ..|..+.+.....+.... .+++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999888888999999987743 1121211222 11 1 123333323333333221 13699
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
++++++|
T Consensus 83 ~vi~~ag 89 (245)
T PRK12824 83 ILVNNAG 89 (245)
T ss_pred EEEECCC
Confidence 9999886
No 452
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.90 E-value=0.006 Score=46.59 Aligned_cols=89 Identities=25% Similarity=0.319 Sum_probs=57.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc-
Q 027106 42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG- 117 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g- 117 (228)
|+|+||+|.+|...++.+...+.+|.+.+|+.. ..+.++ ..|++.+ .|+.+.+.+.+.+ . |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al----~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAAL----K-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHH----T-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHH----c-CCceEEeecCc
Confidence 799999999999999999988889999998753 345556 6787433 2333322222222 2 6999998877
Q ss_pred --h---hHHHHHHHccccCc--EEEE
Q 027106 118 --A---EMQEAAIANMNTYG--RVAV 136 (228)
Q Consensus 118 --~---~~~~~~~~~l~~~G--~~v~ 136 (228)
. .....+.++...-| +++.
T Consensus 75 ~~~~~~~~~~~li~Aa~~agVk~~v~ 100 (233)
T PF05368_consen 75 SHPSELEQQKNLIDAAKAAGVKHFVP 100 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred chhhhhhhhhhHHHhhhccccceEEE
Confidence 2 23344445554434 5553
No 453
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.89 E-value=0.014 Score=46.65 Aligned_cols=93 Identities=8% Similarity=-0.022 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKL-FGC-YVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYF 113 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl 113 (228)
....+++|+| +|.+|.+.+..+.. .+. +|.+..+++++.+.+.++++...+ +... +..+.+. +.|+|+
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~---~~~~av~-----~aDiVi 193 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPL---DGEAIPE-----AVDLVV 193 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEEC---CHHHHhh-----cCCEEE
Confidence 4567999999 59999998887764 565 899999999887776656643110 1111 3333332 589999
Q ss_pred cCcch--hHHHHHHHccccCcEEEEEeeec
Q 027106 114 DNVGA--EMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 114 d~~g~--~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
.|+++ +.+.. .++||-++..+|...
T Consensus 194 taT~s~~Pl~~~---~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 194 TATTSRTPVYPE---AARAGRLVVAVGAFT 220 (304)
T ss_pred EccCCCCceeCc---cCCCCCEEEecCCCC
Confidence 99886 35543 378999999999765
No 454
>PLN00016 RNA-binding protein; Provisional
Probab=96.89 E-value=0.0087 Score=49.30 Aligned_cols=95 Identities=19% Similarity=0.250 Sum_probs=60.2
Q ss_pred CCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHHhCCCceeeccChhhHHHHHHH
Q 027106 39 GEKVFVS----AASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL-----------LKDKLGFDDAFNYKEETDLKAALKR 103 (228)
Q Consensus 39 g~~VlI~----ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~ 103 (228)
..+|||+ ||+|-+|..++..+...|.+|++++++...... +. ..|...+. . +..+ +..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~--~---D~~d-~~~ 124 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVW--G---DPAD-VKS 124 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEEE--e---cHHH-HHh
Confidence 4589999 999999999999888889999999987654221 11 22332221 1 2222 222
Q ss_pred HCCC-CccEEEcCcchh--HHHHHHHccccC--cEEEEEeee
Q 027106 104 YFPD-GIDIYFDNVGAE--MQEAAIANMNTY--GRVAVCGVI 140 (228)
Q Consensus 104 ~~~~-~~d~vld~~g~~--~~~~~~~~l~~~--G~~v~~g~~ 140 (228)
.... ++|+|+++.+.. ....+++.++.. .++|.++..
T Consensus 125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 2223 799999998742 345555665543 378877653
No 455
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.85 E-value=0.019 Score=48.11 Aligned_cols=104 Identities=15% Similarity=0.156 Sum_probs=63.4
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH-CC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY-FP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~-~~ 106 (228)
....+++|++||=.|+ |.|..++.+++.++ .+|++++.++++++.+++ ++|....+..... +.. ..... ..
T Consensus 232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~-d~~-~~~~~~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG-DGR-GPSQWAEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc-ccc-cccccccc
Confidence 4456889999998883 44555556666555 699999999998877764 3455411111111 110 00001 12
Q ss_pred CCccEEEc---Ccch--------------------------hHHHHHHHccccCcEEEEEee
Q 027106 107 DGIDIYFD---NVGA--------------------------EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 107 ~~~d~vld---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~ 139 (228)
+.||.|+- |+|. ..+..+++.|++||+++....
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc 369 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC 369 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 36999873 4441 255667889999999997543
No 456
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=96.85 E-value=0.0085 Score=42.56 Aligned_cols=99 Identities=22% Similarity=0.295 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
+++.+||=.| .|.|..+..+++.. +.++++++.+++..+.+++ +.+...+-... . ++.+ +....++.||+
T Consensus 2 ~~~~~iLDlG--cG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~-~-d~~~-l~~~~~~~~D~ 76 (152)
T PF13847_consen 2 KSNKKILDLG--CGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQ-G-DIED-LPQELEEKFDI 76 (152)
T ss_dssp TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEE-S-BTTC-GCGCSSTTEEE
T ss_pred CCCCEEEEec--CcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEE-e-ehhc-cccccCCCeeE
Confidence 5678899888 67777788888543 6799999999998888874 35655321111 1 2222 22111147999
Q ss_pred EEcCc-----ch--hHHHHHHHccccCcEEEEEeee
Q 027106 112 YFDNV-----GA--EMQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 112 vld~~-----g~--~~~~~~~~~l~~~G~~v~~g~~ 140 (228)
|+... .. ..++.+.++|+++|.++.....
T Consensus 77 I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~~ 112 (152)
T PF13847_consen 77 IISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDPN 112 (152)
T ss_dssp EEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEECC
Confidence 98753 22 3788899999999999886543
No 457
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.85 E-value=0.021 Score=43.55 Aligned_cols=90 Identities=19% Similarity=0.240 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCC----HHH--------HHHHHHHhCCCceeeccChhhHHHHH
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC---YVVGSAGS----KEK--------VTLLKDKLGFDDAFNYKEETDLKAAL 101 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~---~V~~~~~~----~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~ 101 (228)
-++.+|+|.|+ |+.|..++..+...|+ ++++++++ .++ .++++ .++... .+ . ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence 46789999996 9999999988888897 58899987 343 22333 333211 11 1 233333
Q ss_pred HHHCCCCccEEEcCcchhHH-HHHHHccccCcEEEEEe
Q 027106 102 KRYFPDGIDIYFDNVGAEMQ-EAAIANMNTYGRVAVCG 138 (228)
Q Consensus 102 ~~~~~~~~d~vld~~g~~~~-~~~~~~l~~~G~~v~~g 138 (228)
. ++|++|++++...+ ...++.+.++..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2 38999999974332 46667777776666554
No 458
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.84 E-value=0.017 Score=42.36 Aligned_cols=95 Identities=18% Similarity=0.134 Sum_probs=54.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccC--hhhHHHHHHHH------CCC-Cc
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKE--ETDLKAALKRY------FPD-GI 109 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~--~~~~~~~~~~~------~~~-~~ 109 (228)
+|.|.|+ |.+|...+.++...|.+|..++.+++.++.+++.... ........ .......+..+ ..- +.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~~a 79 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAVDA 79 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGCTE
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHhhh
Confidence 5889996 9999998888888899999999999887666532210 00000000 00111122111 111 78
Q ss_pred cEEEcCcchh------HHHHHHHccccCcEEEE
Q 027106 110 DIYFDNVGAE------MQEAAIANMNTYGRVAV 136 (228)
Q Consensus 110 d~vld~~g~~------~~~~~~~~l~~~G~~v~ 136 (228)
|+|+++.... .+.++-+.++++-.+.+
T Consensus 80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilas 112 (180)
T PF02737_consen 80 DLVIEAIPEDLELKQELFAELDEICPPDTILAS 112 (180)
T ss_dssp SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE
T ss_pred heehhhccccHHHHHHHHHHHHHHhCCCceEEe
Confidence 9999999753 55555556666665554
No 459
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.84 E-value=0.0046 Score=50.15 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=30.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK 73 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~ 73 (228)
++|||+||+|.+|..+++.+...|.+|++++++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 4799999999999999999998999999998764
No 460
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.83 E-value=0.014 Score=46.08 Aligned_cols=95 Identities=18% Similarity=0.141 Sum_probs=66.3
Q ss_pred ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHhCCCceeeccChhh
Q 027106 18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDKLGFDDAFNYKEETD 96 (228)
Q Consensus 18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (228)
-+||.....+..|....---.|++|.|+|-++.+|.-.+.++...|+.|+++. ++.+-
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l--------------------- 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDL--------------------- 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCH---------------------
Confidence 35666666666664333235899999999889999999999998999999985 33211
Q ss_pred HHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeec
Q 027106 97 LKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
.+.++ ..|+|+-++|.+ .+... .+++|..++.+|...
T Consensus 196 -~e~~~-----~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 -PAVCR-----RADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred -HHHHh-----cCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 11111 268899888874 44433 388999999998654
No 461
>PRK04266 fibrillarin; Provisional
Probab=96.83 E-value=0.011 Score=45.08 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=60.7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC-Cc--eeeccChhhHHHHHHHHCCCC
Q 027106 33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF-DD--AFNYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~-~~--~~~~~~~~~~~~~~~~~~~~~ 108 (228)
...+++|++||=.|+ |.|..+..+++..+ .+|++++.+++.++.+.+.... .. .+..+.. +. .....+ .+.
T Consensus 67 ~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~-~~-~~~~~l-~~~ 141 (226)
T PRK04266 67 NFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR-KP-ERYAHV-VEK 141 (226)
T ss_pred hCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC-Cc-chhhhc-ccc
Confidence 478899999999983 44555666677664 4899999999877655422111 11 1111111 10 000111 135
Q ss_pred ccEEEcCcchh-----HHHHHHHccccCcEEEEE
Q 027106 109 IDIYFDNVGAE-----MQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 109 ~d~vld~~g~~-----~~~~~~~~l~~~G~~v~~ 137 (228)
+|+|+.....+ .+..+.+.|+|||+++..
T Consensus 142 ~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 142 VDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 99998544321 367888899999999984
No 462
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.83 E-value=0.0058 Score=49.05 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV 76 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~ 76 (228)
.|.+|||+||+|.+|..+++.+...|.+|+++.++..+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch
Confidence 478999999999999999988888899999888776543
No 463
>PRK07574 formate dehydrogenase; Provisional
Probab=96.82 E-value=0.0081 Score=49.41 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.|.+|.|+| .|.+|...++.++.+|++|++.+++....+..+ .+|... .. ++.+.+. ..|+|+.+..
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence 577999999 599999999999999999999997753333333 444321 11 2222222 3677777665
Q ss_pred h-h-----HHHHHHHccccCcEEEEEee
Q 027106 118 A-E-----MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 118 ~-~-----~~~~~~~~l~~~G~~v~~g~ 139 (228)
. + .-...+..|+++..+|.++.
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 2 2 12345677888877777764
No 464
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0082 Score=46.22 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=33.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLK 80 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~ 80 (228)
+++||+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 4799999999999999988888899999999876 4444333
No 465
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.82 E-value=0.009 Score=47.83 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.|.+|.|+| .|.+|...++.++.+|++|++++++.++.+ +..... ... ++.+.+. ..|+|+.+.+
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence 678999999 699999999999999999999987543311 211111 111 3333332 3688887776
Q ss_pred h-h-----HHHHHHHccccCcEEEEEee
Q 027106 118 A-E-----MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 118 ~-~-----~~~~~~~~l~~~G~~v~~g~ 139 (228)
. + .-...++.|+++..+|.+|.
T Consensus 200 lt~~T~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence 3 2 23456788888888888875
No 466
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.82 E-value=0.019 Score=45.46 Aligned_cols=78 Identities=14% Similarity=0.191 Sum_probs=47.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCcc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK---EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
-++.+++|.|+ ||.+.+++..+...|+ +|+++.|++ ++.+.+.++++... .+.....++ ...+.+. -..+|
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~l~~~-~~~aD 198 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEA-LASAD 198 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh-hhhhhhh-cccCC
Confidence 36779999996 9999987776667887 899999984 45555553554311 111111101 1111111 12589
Q ss_pred EEEcCcc
Q 027106 111 IYFDNVG 117 (228)
Q Consensus 111 ~vld~~g 117 (228)
+|++|+.
T Consensus 199 ivINaTp 205 (288)
T PRK12749 199 ILTNGTK 205 (288)
T ss_pred EEEECCC
Confidence 9999886
No 467
>PLN03139 formate dehydrogenase; Provisional
Probab=96.81 E-value=0.0084 Score=49.28 Aligned_cols=89 Identities=26% Similarity=0.260 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.|.+|.|+| .|.+|...++.++.+|++|++.+++....+... +.|+... . ++.+.+. ..|+|+.+.+
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~---~---~l~ell~-----~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE---E---DLDAMLP-----KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec---C---CHHHHHh-----hCCEEEEeCC
Confidence 678999999 599999999999999999999987643333333 4554221 1 2222332 2577776665
Q ss_pred h-h-----HHHHHHHccccCcEEEEEee
Q 027106 118 A-E-----MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 118 ~-~-----~~~~~~~~l~~~G~~v~~g~ 139 (228)
. + .-...+..|+++..+|.++.
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 2 1 22446678888887777764
No 468
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.81 E-value=0.02 Score=45.12 Aligned_cols=79 Identities=15% Similarity=0.073 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN 115 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 115 (228)
--.|++|+|.|+++-+|...+.++...|++|+++.+... .+. +.+ ..+|+|+++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~------------------~~~-----~~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLP------------------ELV-----KQADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHH------------------HHh-----ccCCEEEEc
Confidence 358999999997445999999999999998888875211 111 111 147999999
Q ss_pred cchhHHHHHHHccccCcEEEEEeeec
Q 027106 116 VGAEMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 116 ~g~~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+|.+.+ --.+.++++..++.+|...
T Consensus 210 tG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 210 VGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 986432 1135688888888888654
No 469
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.81 E-value=0.0094 Score=48.22 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG 117 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 117 (228)
.|++|.|+| .|.+|...++.++..|++|++++++.... ... ..|... . ++.+.+. ..|+|+-++.
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~----~---~l~ell~-----~aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAEY----R---PLEELLR-----ESDFVSLHVP 213 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCEe----c---CHHHHHh-----hCCEEEEeCC
Confidence 578999999 59999999999999999999999765432 222 344321 1 2222232 2578777665
Q ss_pred h-h-----HHHHHHHccccCcEEEEEeee
Q 027106 118 A-E-----MQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 118 ~-~-----~~~~~~~~l~~~G~~v~~g~~ 140 (228)
. + .-...+..|+++..++.++..
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcCc
Confidence 3 1 224567778888888877653
No 470
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]
Probab=96.80 E-value=0.067 Score=38.33 Aligned_cols=120 Identities=15% Similarity=0.029 Sum_probs=84.6
Q ss_pred hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106 16 VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDDAFNYKE 93 (228)
Q Consensus 16 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~ 93 (228)
-|.+|....+|..+. ..-..+.|-.||=.|. |.|...=.+++..- ..++.+..+.+=...+.+.+...++++-+.
T Consensus 27 GaI~PsSs~lA~~M~-s~I~pesglpVlElGP--GTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda 103 (194)
T COG3963 27 GAILPSSSILARKMA-SVIDPESGLPVLELGP--GTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDA 103 (194)
T ss_pred eeecCCcHHHHHHHH-hccCcccCCeeEEEcC--CccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccch
Confidence 455666667777666 5677889999999994 33444444444332 378888988887777775666667777665
Q ss_pred hhhHHHHHHHHCCCCccEEEcCcch---------hHHHHHHHccccCcEEEEEee
Q 027106 94 ETDLKAALKRYFPDGIDIYFDNVGA---------EMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~d~vld~~g~---------~~~~~~~~~l~~~G~~v~~g~ 139 (228)
. +....+.+..+..||+|+.+..- ..++..+..++.||.++.+.-
T Consensus 104 ~-~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY 157 (194)
T COG3963 104 F-DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY 157 (194)
T ss_pred h-hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 4 55555666555589999998762 277888899999999999763
No 471
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=96.80 E-value=0.013 Score=49.93 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=66.8
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCceeeccChhhHHHHHHHHCCCCcc
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GFDDAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
....++++++||-.| .|.|..+..+++..+++|++++.+++..+.+++.. +...-+..... ++... .+..+.||
T Consensus 260 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~-d~~~~--~~~~~~fD 334 (475)
T PLN02336 260 DKLDLKPGQKVLDVG--CGIGGGDFYMAENFDVHVVGIDLSVNMISFALERAIGRKCSVEFEVA-DCTKK--TYPDNSFD 334 (475)
T ss_pred HhcCCCCCCEEEEEe--ccCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHhhcCCCceEEEEc-CcccC--CCCCCCEE
Confidence 344578899999999 44466777788878999999999998888876322 22111111111 11110 11123699
Q ss_pred EEEcCcc-------hhHHHHHHHccccCcEEEEEee
Q 027106 111 IYFDNVG-------AEMQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 111 ~vld~~g-------~~~~~~~~~~l~~~G~~v~~g~ 139 (228)
+|+.... ...+..+.+.|+|||+++....
T Consensus 335 ~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 370 (475)
T PLN02336 335 VIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISDY 370 (475)
T ss_pred EEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9986322 1378899999999999987654
No 472
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.79 E-value=0.0056 Score=45.96 Aligned_cols=104 Identities=20% Similarity=0.280 Sum_probs=69.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Ccee----eccChhhHHHHHHHHCC--CC
Q 027106 39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DDAF----NYKEETDLKAALKRYFP--DG 108 (228)
Q Consensus 39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~~----~~~~~~~~~~~~~~~~~--~~ 108 (228)
|++++++|+.||+|+.....+...|+++.++..+.+..+... ++.+ ..++ |..+-.+.....++... +.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 899999999999999999888899999988888887766655 5543 2221 22221244444444333 36
Q ss_pred ccEEEcCcch---hHH---------------HHHHHcc-----ccCcEEEEEeeeccc
Q 027106 109 IDIYFDNVGA---EMQ---------------EAAIANM-----NTYGRVAVCGVISEY 143 (228)
Q Consensus 109 ~d~vld~~g~---~~~---------------~~~~~~l-----~~~G~~v~~g~~~~~ 143 (228)
+|+++|.+|- ..+ ..+++.+ .+||.++.+++..+.
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL 141 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL 141 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence 8999998873 122 2233333 367899999887664
No 473
>PLN02823 spermine synthase
Probab=96.77 E-value=0.029 Score=45.33 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC------ceeeccChhhHHHHHHHHCCCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD------DAFNYKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~d 110 (228)
..++|||.| ||-|..+..+++..+. +|++++.+++-.+.+++-++.. .-+..... |....++. .++.+|
T Consensus 103 ~pk~VLiiG--gG~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~-Da~~~L~~-~~~~yD 178 (336)
T PLN02823 103 NPKTVFIMG--GGEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIN-DARAELEK-RDEKFD 178 (336)
T ss_pred CCCEEEEEC--CCchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEC-hhHHHHhh-CCCCcc
Confidence 457899999 5566667777776655 8999999999999998444321 11111111 44444433 344799
Q ss_pred EEE-cCcc----h--------hHHH-HHHHccccCcEEEE
Q 027106 111 IYF-DNVG----A--------EMQE-AAIANMNTYGRVAV 136 (228)
Q Consensus 111 ~vl-d~~g----~--------~~~~-~~~~~l~~~G~~v~ 136 (228)
+|| |... + +.++ .+.+.|+++|.++.
T Consensus 179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~ 218 (336)
T PLN02823 179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVT 218 (336)
T ss_pred EEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEE
Confidence 976 4221 1 2455 67889999999876
No 474
>PLN02928 oxidoreductase family protein
Probab=96.76 E-value=0.0093 Score=48.49 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----Cceee--ccChhhHHHHHHHHCCCCcc
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-----DDAFN--YKEETDLKAALKRYFPDGID 110 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~~~--~~~~~~~~~~~~~~~~~~~d 110 (228)
.|.+|.|+| .|.+|..+++.++.+|++|++++++..+.. .. .++. ....+ .... ++.+.+.+ .|
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~L~ell~~-----aD 228 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEP-ED-GLLIPNGDVDDLVDEKGGHE-DIYEFAGE-----AD 228 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhh-hh-hhccccccccccccccCccc-CHHHHHhh-----CC
Confidence 578999999 599999999999999999999987632211 11 1110 00000 0111 33333332 69
Q ss_pred EEEcCcch-h-----HHHHHHHccccCcEEEEEee
Q 027106 111 IYFDNVGA-E-----MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 111 ~vld~~g~-~-----~~~~~~~~l~~~G~~v~~g~ 139 (228)
+|+.+.+. + .-...+..|+++..+|.++.
T Consensus 229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred EEEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 98887763 2 33567889999999998874
No 475
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.75 E-value=0.018 Score=46.46 Aligned_cols=93 Identities=20% Similarity=0.168 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAK-LFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD 114 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~-~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 114 (228)
-.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.+++..+.++++...+. ++.+.+ ...|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l-----~~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEAL-----PEADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHH-----ccCCEEEE
Confidence 467899999999999998887775 4565 8999999888887766455422211 222222 14899999
Q ss_pred Ccchh-HHHHHHHccccCcEEEEEeee
Q 027106 115 NVGAE-MQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 115 ~~g~~-~~~~~~~~l~~~G~~v~~g~~ 140 (228)
+++.. .+..--..+++.-.++.++.+
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence 88863 221111344566566667654
No 476
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.75 E-value=0.071 Score=42.87 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=54.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----------hCCCc-----eeeccChhhHHHHHHHH
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----------LGFDD-----AFNYKEETDLKAALKRY 104 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----------~g~~~-----~~~~~~~~~~~~~~~~~ 104 (228)
.+|.|.|+ |.+|...++.+...|.+|++.+.+++..+.+++. .|... -+.... ++.+.+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~--~l~~av--- 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVA--TIEACV--- 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC--CHHHHh---
Confidence 58999995 9999998888888999999999988766544321 11100 000000 111111
Q ss_pred CCCCccEEEcCcchh------HHHHHHHccccCc
Q 027106 105 FPDGIDIYFDNVGAE------MQEAAIANMNTYG 132 (228)
Q Consensus 105 ~~~~~d~vld~~g~~------~~~~~~~~l~~~G 132 (228)
.+.|+|++++... .+..+.+.++++.
T Consensus 82 --~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a 113 (321)
T PRK07066 82 --ADADFIQESAPEREALKLELHERISRAAKPDA 113 (321)
T ss_pred --cCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence 2689999998752 5566666667665
No 477
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.75 E-value=0.0083 Score=45.61 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=50.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106 42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDNVGA 118 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 118 (228)
|||+||+|-+|..++..+...|..|+.+.++.........+.... ...|..+.+.+.+.+... .+|+|+.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999988887766554443123321 123444442444444432 68999998764
No 478
>PRK14968 putative methyltransferase; Provisional
Probab=96.74 E-value=0.01 Score=43.61 Aligned_cols=95 Identities=21% Similarity=0.188 Sum_probs=59.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCce-eeccChhhHHHHHHHHCCCCccE
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDA-FNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
..++++||..| .|.|..+..+++. +.+|++++.+++..+.+++.+ +.... +..... ++.+. ...+.+|+
T Consensus 21 ~~~~~~vLd~G--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-d~~~~---~~~~~~d~ 93 (188)
T PRK14968 21 DKKGDRVLEVG--TGSGIVAIVAAKN-GKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRS-DLFEP---FRGDKFDV 93 (188)
T ss_pred ccCCCEEEEEc--cccCHHHHHHHhh-cceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEec-ccccc---ccccCceE
Confidence 47888999998 5667777777776 889999999988877775332 22110 111111 22111 11226888
Q ss_pred EEcCcc----------------------------hhHHHHHHHccccCcEEEEE
Q 027106 112 YFDNVG----------------------------AEMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 112 vld~~g----------------------------~~~~~~~~~~l~~~G~~v~~ 137 (228)
|+-..+ ...++.+.+.|+++|.++.+
T Consensus 94 vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~ 147 (188)
T PRK14968 94 ILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLL 147 (188)
T ss_pred EEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 874211 11467788999999988765
No 479
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.74 E-value=0.0098 Score=42.67 Aligned_cols=81 Identities=22% Similarity=0.259 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCceeeccC---hhhHHHHHHHHCC--CCcc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFDDAFNYKE---ETDLKAALKRYFP--DGID 110 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~--~~~d 110 (228)
.+|-.-||+|+.+++|.+++..+...|+.|+..+...++. +.++ ++|-.-++.+.+ +++....+..... |..|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 4677789999999999999999888999999988655544 4455 898755543322 2244444433322 3689
Q ss_pred EEEcCcch
Q 027106 111 IYFDNVGA 118 (228)
Q Consensus 111 ~vld~~g~ 118 (228)
+.++|+|.
T Consensus 86 ~~vncagi 93 (260)
T KOG1199|consen 86 ALVNCAGI 93 (260)
T ss_pred eeeeccce
Confidence 99999984
No 480
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.72 E-value=0.026 Score=44.27 Aligned_cols=98 Identities=15% Similarity=0.079 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCCc
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDGI 109 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~ 109 (228)
..+++||+.|+ |.|..+..+++.... ++++++.+++-.+.+++.+.. +.-++.... +..+.+.+ ..+.+
T Consensus 71 ~~p~~VL~iG~--G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~-~~~~y 146 (270)
T TIGR00417 71 PNPKHVLVIGG--GDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLAD-TENTF 146 (270)
T ss_pred CCCCEEEEEcC--CchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHh-CCCCc
Confidence 34569999994 445566666666544 899999998887877733311 011111111 33334433 23479
Q ss_pred cEEEcCcc-----------hhHHHHHHHccccCcEEEEEe
Q 027106 110 DIYFDNVG-----------AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 110 d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~g 138 (228)
|+|+-... .+.++.+.+.|+++|.++...
T Consensus 147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 99864221 135678889999999999863
No 481
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=96.71 E-value=0.047 Score=45.86 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=64.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
...++++|++||=.+ .+.|..+++++..+ +.+|++++.++.+++.+++ ++|...+-... . +.. .+.....
T Consensus 231 ~~l~~~~g~~VLD~c--agpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~-~-Da~-~l~~~~~ 305 (431)
T PRK14903 231 LLMELEPGLRVLDTC--AAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKI-A-DAE-RLTEYVQ 305 (431)
T ss_pred HHhCCCCCCEEEEeC--CCccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEE-C-chh-hhhhhhh
Confidence 446789999998887 34455566666666 4599999999999988764 35554321111 1 211 1111123
Q ss_pred CCccEEEc---Ccchh--------------------------HHHHHHHccccCcEEEEEee
Q 027106 107 DGIDIYFD---NVGAE--------------------------MQEAAIANMNTYGRVAVCGV 139 (228)
Q Consensus 107 ~~~d~vld---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~ 139 (228)
+.||.|+- |+|.. .+..+++.|++||.++....
T Consensus 306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 367 (431)
T PRK14903 306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC 367 (431)
T ss_pred ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 46999873 43321 25677899999999876543
No 482
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.70 E-value=0.015 Score=42.64 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=42.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK-------EKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--D 107 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~-------~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~ 107 (228)
++||+|+.|++|...++.+...+. +++.+.++. +..+.++ +.|..- -.|..+.++..+.+.+... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 689999999999999988887776 899999882 1233344 445421 1233333233333333322 2
Q ss_pred CccEEEcCcc
Q 027106 108 GIDIYFDNVG 117 (228)
Q Consensus 108 ~~d~vld~~g 117 (228)
.++.||.++|
T Consensus 81 ~i~gVih~ag 90 (181)
T PF08659_consen 81 PIDGVIHAAG 90 (181)
T ss_dssp -EEEEEE---
T ss_pred Ccceeeeeee
Confidence 5677776665
No 483
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.69 E-value=0.017 Score=41.56 Aligned_cols=89 Identities=20% Similarity=0.137 Sum_probs=56.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-
Q 027106 40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA- 118 (228)
Q Consensus 40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~- 118 (228)
.+|-++| .|.+|...++-+...|.+|++.++++++.+.+. +.|+.. . . +..+.+.+ .|+||-|+..
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~-~--~---s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEV-A--D---SPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEE-E--S---SHHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhh-h--h---hhhhHhhc-----ccceEeecccc
Confidence 3788999 599999998888888999999999999988888 666422 1 1 22223332 5888887765
Q ss_pred hHHHH------HHHccccCcEEEEEeeec
Q 027106 119 EMQEA------AIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 119 ~~~~~------~~~~l~~~G~~v~~g~~~ 141 (228)
+.... ++..+.++..++.+++..
T Consensus 69 ~~v~~v~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhhhhhhhhHHhhccccceEEEecCCcc
Confidence 33333 344556666777666543
No 484
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=96.68 E-value=0.023 Score=47.88 Aligned_cols=101 Identities=20% Similarity=0.297 Sum_probs=62.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
...++++|++||=.| .|.|..++.+++.. +.+|++++.++++.+.+++ ++|...+ ..... +..+....+ .
T Consensus 244 ~~l~~~~g~~VLDlg--aG~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~-D~~~~~~~~-~ 318 (444)
T PRK14902 244 PALDPKGGDTVLDAC--AAPGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKAL-DARKVHEKF-A 318 (444)
T ss_pred HHhCCCCCCEEEEeC--CCCCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeC-Ccccccchh-c
Confidence 445678999998887 34455555666655 3599999999998877763 3555432 21111 221111111 1
Q ss_pred CCccEEEc---Ccch--------------------------hHHHHHHHccccCcEEEEE
Q 027106 107 DGIDIYFD---NVGA--------------------------EMQEAAIANMNTYGRVAVC 137 (228)
Q Consensus 107 ~~~d~vld---~~g~--------------------------~~~~~~~~~l~~~G~~v~~ 137 (228)
+.||+|+- |+|. ..+..+++.|++||+++..
T Consensus 319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 46999863 3321 2466778899999999853
No 485
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.67 E-value=0.0096 Score=45.34 Aligned_cols=77 Identities=22% Similarity=0.271 Sum_probs=47.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCccEE
Q 027106 42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGIDIY 112 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v 112 (228)
+||+|++|++|..+++.+...|++|++++++. ++.+...+ ..|.. ...|..+.....+.+.... .+++|++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999988888899999988764 33222211 33421 1234444323333232221 1368999
Q ss_pred EcCcch
Q 027106 113 FDNVGA 118 (228)
Q Consensus 113 ld~~g~ 118 (228)
+.++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998874
No 486
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.67 E-value=0.057 Score=40.40 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHC-CCCccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYF-PDGIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~-~~~~d~v 112 (228)
++.+||-.| .|.|..+..+++.. +.+|++++.+++..+.+++.+ +...+- .... +..+.+.... ++.+|.|
T Consensus 40 ~~~~VLDiG--cGtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~-d~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIG--FGKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCG-DAVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEc--cCCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEec-CHHHHHHHHcCccccceE
Confidence 678899998 55677777888765 458999999999888887433 333221 1112 3322333223 3478988
Q ss_pred EcCcc---------------hhHHHHHHHccccCcEEEEEe
Q 027106 113 FDNVG---------------AEMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 113 ld~~g---------------~~~~~~~~~~l~~~G~~v~~g 138 (228)
+-... ...++.+.+.|+|+|.++...
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 75322 236888899999999998864
No 487
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.66 E-value=0.011 Score=46.99 Aligned_cols=74 Identities=28% Similarity=0.386 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCC-C-c--ee--eccChhhHHHHHHHHCCCC
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK---VTLLKDKLGF-D-D--AF--NYKEETDLKAALKRYFPDG 108 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~-~-~--~~--~~~~~~~~~~~~~~~~~~~ 108 (228)
.+.+|+|+||+|=+|...+..+...|++|.++.|+++. .++++ ++.. . . ++ |-.+...+...+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence 57899999999999999999999999999999998775 34566 5542 1 1 11 2222224444432 5
Q ss_pred ccEEEcCcc
Q 027106 109 IDIYFDNVG 117 (228)
Q Consensus 109 ~d~vld~~g 117 (228)
.|.||.++.
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 899988765
No 488
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=96.65 E-value=0.026 Score=43.68 Aligned_cols=98 Identities=11% Similarity=0.166 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCc
Q 027106 36 PKKGEKVFVSAASGSVGHLVGQYAKL---FGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGI 109 (228)
Q Consensus 36 ~~~g~~VlI~ga~g~~G~~a~~~a~~---~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (228)
+.++.+||-.|+ |.|..+..+++. .++++++++.+++.++.+++.+ +...-+..... ++. +...+.+
T Consensus 54 ~~~~~~vLDlGc--GtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~-d~~----~~~~~~~ 126 (247)
T PRK15451 54 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DIR----DIAIENA 126 (247)
T ss_pred CCCCCEEEEEcc--cCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC-Chh----hCCCCCC
Confidence 568899999994 446666667663 3679999999999888887443 22211222111 221 1112357
Q ss_pred cEEEcCcc---------hhHHHHHHHccccCcEEEEEeee
Q 027106 110 DIYFDNVG---------AEMQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 110 d~vld~~g---------~~~~~~~~~~l~~~G~~v~~g~~ 140 (228)
|+|+.+.. ...++.+.+.|+|||.++.....
T Consensus 127 D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~~ 166 (247)
T PRK15451 127 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 166 (247)
T ss_pred CEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 88775422 13788899999999999998643
No 489
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.64 E-value=0.01 Score=49.16 Aligned_cols=76 Identities=18% Similarity=0.295 Sum_probs=53.8
Q ss_pred CCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHH
Q 027106 37 KKGEKVFVSAA----------------SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAA 100 (228)
Q Consensus 37 ~~g~~VlI~ga----------------~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 100 (228)
-+|.+|||+|| +|.+|.+.++.+...|++|++++++.+ .+ . ..+. ..++..+.+++.+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~-~~~~-~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--T-PAGV-KRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--C-CCCc-EEEccCCHHHHHHH
Confidence 47899999999 566999999999999999999986642 11 1 1122 23455554466666
Q ss_pred HHHHCCCCccEEEcCcch
Q 027106 101 LKRYFPDGIDIYFDNVGA 118 (228)
Q Consensus 101 ~~~~~~~~~d~vld~~g~ 118 (228)
+.+.. +.+|+++.+++-
T Consensus 261 v~~~~-~~~DilI~~Aav 277 (399)
T PRK05579 261 VLAAL-PQADIFIMAAAV 277 (399)
T ss_pred HHHhc-CCCCEEEEcccc
Confidence 65543 369999999885
No 490
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=96.63 E-value=0.037 Score=46.52 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=63.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHH--H
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKR--Y 104 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~--~ 104 (228)
...++++|++||=.| .|.|..+..+++.++ .+|++++.++++.+.+++ .+|...+.... . +....... .
T Consensus 246 ~~l~~~~g~~VLDl~--ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~-~-D~~~~~~~~~~ 321 (434)
T PRK14901 246 PLLDPQPGEVILDAC--AAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILA-A-DSRNLLELKPQ 321 (434)
T ss_pred HHhCCCCcCEEEEeC--CCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEe-C-Chhhccccccc
Confidence 345678999998887 344555556666553 489999999998877753 46665422111 1 22111100 1
Q ss_pred CCCCccEEE-c--Ccch--------------------------hHHHHHHHccccCcEEEEEe
Q 027106 105 FPDGIDIYF-D--NVGA--------------------------EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 105 ~~~~~d~vl-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g 138 (228)
..+.||.|+ | |+|. ..+..+++.|++||+++-..
T Consensus 322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst 384 (434)
T PRK14901 322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT 384 (434)
T ss_pred ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 123699987 3 4441 24677889999999988643
No 491
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.62 E-value=0.024 Score=44.50 Aligned_cols=96 Identities=19% Similarity=0.095 Sum_probs=67.5
Q ss_pred ccchhHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106 18 ILGFSGLTAYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD 96 (228)
Q Consensus 18 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (228)
-+||........| +..++ -.|++|+|.|.+..+|.-++.++...|++|+++.+... +
T Consensus 137 ~~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~ 194 (285)
T PRK14189 137 FRPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------D 194 (285)
T ss_pred CcCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------C
Confidence 3566655555556 33444 48999999998888899999999999999998653211 2
Q ss_pred HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106 97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+.+.++ ..|+|+-++|.+.+-. -+.++++..++.+|...
T Consensus 195 l~~~~~-----~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 195 LAAHTR-----QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHHhh-----hCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 222222 2699999998753322 27899999999999654
No 492
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=96.61 E-value=0.027 Score=42.47 Aligned_cols=102 Identities=21% Similarity=0.160 Sum_probs=65.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106 34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDI 111 (228)
Q Consensus 34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 111 (228)
....++.+||-.|+ |.|..+..+++..+ .++++++.++...+.+++.+....-+..... +..+.. ...+.+|+
T Consensus 35 ~~~~~~~~vldiG~--G~G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~--~~~~~~D~ 109 (223)
T TIGR01934 35 IGVFKGQKVLDVAC--GTGDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQA-DAEALP--FEDNSFDA 109 (223)
T ss_pred hccCCCCeEEEeCC--CCChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEec-chhcCC--CCCCcEEE
Confidence 44558899999983 44777778888776 4899999998888888743321110111111 222111 11237999
Q ss_pred EEcCcc-------hhHHHHHHHccccCcEEEEEeee
Q 027106 112 YFDNVG-------AEMQEAAIANMNTYGRVAVCGVI 140 (228)
Q Consensus 112 vld~~g-------~~~~~~~~~~l~~~G~~v~~g~~ 140 (228)
|+...+ ...++.+.+.|+++|+++.++..
T Consensus 110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 145 (223)
T TIGR01934 110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFS 145 (223)
T ss_pred EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence 875332 13778888999999999987753
No 493
>PRK06849 hypothetical protein; Provisional
Probab=96.61 E-value=0.031 Score=46.26 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee----ccChhhHHHHHHHHCCC-CccEE
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN----YKEETDLKAALKRYFPD-GIDIY 112 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~-~~d~v 112 (228)
...+|||+|+..+.|+..++.++..|.+|++++..+....... ..++..+. ..+.+.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s--~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS--RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4579999998888999999999999999999997764433211 12222221 11222566666665544 79999
Q ss_pred EcCcchh-HHHHHHHccccCcEE
Q 027106 113 FDNVGAE-MQEAAIANMNTYGRV 134 (228)
Q Consensus 113 ld~~g~~-~~~~~~~~l~~~G~~ 134 (228)
+-+.... .+....+.++++.++
T Consensus 81 IP~~e~~~~~a~~~~~l~~~~~v 103 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAYCEV 103 (389)
T ss_pred EECChHHHhHHhhhhhhcCCcEE
Confidence 9877643 333334455555443
No 494
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.60 E-value=0.0049 Score=47.78 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=50.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC-CCccEEEcCcch
Q 027106 41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP-DGIDIYFDNVGA 118 (228)
Q Consensus 41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~vld~~g~ 118 (228)
+|||.||||- |..++..+...|.+|+++.+++...+.+. ..|...+..... +-.+ +.++.. .++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~~-l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQE-LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHHH-HHHHHHhcCCCEEEEcCCH
Confidence 7999998665 99988887788999999998887767766 565544432221 1111 323333 379999999874
No 495
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.035 Score=43.62 Aligned_cols=96 Identities=19% Similarity=0.093 Sum_probs=68.6
Q ss_pred ccchhHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106 18 ILGFSGLTAYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD 96 (228)
Q Consensus 18 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (228)
-.||.....+..| +..++ -.|++|+|.|-+..+|.-++.++...|+.|+++.+... +
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~ 195 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------N 195 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------C
Confidence 3567666666666 44444 47999999998788999999999999999998874311 2
Q ss_pred HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106 97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+.+.++ ..|+++.++|.+.+-. -+.++++..++.+|...
T Consensus 196 l~~~~~-----~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin~ 234 (285)
T PRK10792 196 LRHHVR-----NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGINR 234 (285)
T ss_pred HHHHHh-----hCCEEEEcCCCccccc-HHHcCCCcEEEEccccc
Confidence 222222 3799999998753322 27889999999998543
No 496
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.58 E-value=0.04 Score=43.27 Aligned_cols=96 Identities=19% Similarity=0.076 Sum_probs=66.9
Q ss_pred ccchhHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106 18 ILGFSGLTAYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD 96 (228)
Q Consensus 18 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (228)
-+||........| +..++ -.|++|+|.|.+..+|.-++.++...|+.|+++..... +
T Consensus 136 ~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~ 193 (285)
T PRK14191 136 FVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D 193 (285)
T ss_pred CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence 3466666666666 33444 47999999998779999999999999999988753221 2
Q ss_pred HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106 97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141 (228)
Q Consensus 97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 141 (228)
+.+.++ ..|+|+-++|.+.+-. -+.+++|..++.+|...
T Consensus 194 l~~~~~-----~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 194 LSFYTQ-----NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred HHHHHH-----hCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 222222 2689999888753311 34678999999998643
No 497
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=96.57 E-value=0.057 Score=45.31 Aligned_cols=101 Identities=17% Similarity=0.256 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC-C
Q 027106 32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF-P 106 (228)
Q Consensus 32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~-~ 106 (228)
...++++|++||=.|+ |.|..+..+++..+ .+|++++.++++.+.+++. +|....+... +..+ ..... .
T Consensus 238 ~~l~~~~g~~VLDlga--G~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~---D~~~-~~~~~~~ 311 (427)
T PRK10901 238 TLLAPQNGERVLDACA--APGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVG---DARD-PAQWWDG 311 (427)
T ss_pred HHcCCCCCCEEEEeCC--CCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEc---Cccc-chhhccc
Confidence 3456789999998883 34445556666654 6999999999988877643 4442111111 1111 11111 2
Q ss_pred CCccEEE-c--Ccch--------------------------hHHHHHHHccccCcEEEEEe
Q 027106 107 DGIDIYF-D--NVGA--------------------------EMQEAAIANMNTYGRVAVCG 138 (228)
Q Consensus 107 ~~~d~vl-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g 138 (228)
+.||.|+ | |.+. ..+..+.+.|+|||+++...
T Consensus 312 ~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 312 QPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred CCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3699987 2 3331 25677888999999998654
No 498
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.57 E-value=0.0041 Score=47.39 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106 38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74 (228)
Q Consensus 38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~ 74 (228)
++.+++|+|+++++|...+..+...|++|+++++++.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4679999999999999999888888999999987643
No 499
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.56 E-value=0.014 Score=44.50 Aligned_cols=76 Identities=16% Similarity=0.152 Sum_probs=46.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCCccEE
Q 027106 42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDGIDIY 112 (228)
Q Consensus 42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~v 112 (228)
|||+||+|++|..+++.+...|++|++++++ +++.+.+.++ .+.. . ..|..+.++....+.+.. .+++|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999988899999888754 3333333212 2321 1 234444323333333221 2368898
Q ss_pred EcCcc
Q 027106 113 FDNVG 117 (228)
Q Consensus 113 ld~~g 117 (228)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88766
No 500
>PLN02214 cinnamoyl-CoA reductase
Probab=96.56 E-value=0.014 Score=47.38 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=34.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106 37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK 75 (228)
Q Consensus 37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~ 75 (228)
.++.+|||+||+|.+|..+++.+...|.+|++++++.++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 357799999999999999999888899999999887553
Done!