Query 027111
Match_columns 228
No_of_seqs 127 out of 1450
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 05:06:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027111.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027111hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 1.2E-39 2.6E-44 261.2 16.8 166 7-191 1-170 (203)
2 PRK14116 gpmA phosphoglyceromu 100.0 9.8E-39 2.1E-43 260.0 15.9 170 8-191 1-201 (228)
3 PRK15004 alpha-ribazole phosph 100.0 4.1E-38 8.8E-43 251.6 17.3 164 9-191 1-168 (199)
4 PRK14119 gpmA phosphoglyceromu 100.0 8.7E-38 1.9E-42 254.6 17.8 170 8-191 1-201 (228)
5 PRK01295 phosphoglyceromutase; 100.0 1E-37 2.2E-42 250.3 17.0 172 7-192 1-178 (206)
6 TIGR03162 ribazole_cobC alpha- 100.0 7E-37 1.5E-41 240.0 15.5 160 11-191 1-164 (177)
7 TIGR03848 MSMEG_4193 probable 100.0 8.3E-37 1.8E-41 245.0 16.2 164 10-191 1-171 (204)
8 PRK14120 gpmA phosphoglyceromu 100.0 1.1E-36 2.3E-41 250.3 17.0 173 6-192 2-203 (249)
9 COG0406 phoE Broad specificity 100.0 1.6E-36 3.5E-41 243.9 17.7 166 7-189 1-170 (208)
10 PRK01112 phosphoglyceromutase; 100.0 1E-36 2.2E-41 247.8 16.5 171 8-192 1-201 (228)
11 PRK03482 phosphoglycerate muta 100.0 1.8E-36 3.9E-41 244.9 17.9 164 8-190 1-168 (215)
12 PRK14118 gpmA phosphoglyceromu 100.0 2.3E-36 4.9E-41 245.9 17.1 168 9-190 1-199 (227)
13 PRK14117 gpmA phosphoglyceromu 100.0 2.6E-36 5.6E-41 246.0 17.5 169 8-190 1-200 (230)
14 TIGR01258 pgm_1 phosphoglycera 100.0 1.1E-35 2.5E-40 244.0 16.0 169 9-191 1-200 (245)
15 PRK13462 acid phosphatase; Pro 100.0 1.9E-35 4.2E-40 236.5 16.7 160 6-190 3-165 (203)
16 PRK14115 gpmA phosphoglyceromu 100.0 2.6E-35 5.7E-40 242.1 17.1 169 9-191 1-200 (247)
17 PRK07238 bifunctional RNase H/ 100.0 4.6E-35 9.9E-40 254.6 17.7 167 6-191 169-339 (372)
18 PF00300 His_Phos_1: Histidine 100.0 4.9E-34 1.1E-38 218.9 9.4 153 10-179 1-158 (158)
19 smart00855 PGAM Phosphoglycera 100.0 8E-33 1.7E-37 212.5 13.2 150 10-179 1-155 (155)
20 KOG0235 Phosphoglycerate mutas 100.0 1.5E-31 3.3E-36 211.6 14.2 173 6-192 3-184 (214)
21 PTZ00322 6-phosphofructo-2-kin 100.0 7.1E-32 1.5E-36 249.4 14.0 165 7-186 418-599 (664)
22 COG0588 GpmA Phosphoglycerate 100.0 5.4E-31 1.2E-35 204.8 11.4 182 8-206 1-213 (230)
23 PTZ00123 phosphoglycerate muta 100.0 4.5E-29 9.8E-34 204.1 14.4 157 21-191 1-188 (236)
24 PTZ00122 phosphoglycerate muta 99.9 1.1E-25 2.4E-30 189.3 14.8 150 9-190 103-258 (299)
25 cd07067 HP_PGM_like Histidine 99.9 2.3E-25 4.9E-30 170.4 14.9 123 10-189 1-124 (153)
26 KOG4754 Predicted phosphoglyce 99.9 9.8E-23 2.1E-27 158.2 13.1 175 8-189 14-205 (248)
27 KOG3734 Predicted phosphoglyce 99.9 1.6E-22 3.5E-27 164.7 14.8 176 6-190 10-220 (272)
28 cd07040 HP Histidine phosphata 99.9 3.6E-22 7.7E-27 152.2 14.7 122 10-189 1-124 (153)
29 PRK06193 hypothetical protein; 99.9 3.6E-21 7.8E-26 153.0 13.0 136 7-185 41-176 (206)
30 TIGR00249 sixA phosphohistidin 99.9 6.1E-21 1.3E-25 146.0 13.3 122 9-186 1-122 (152)
31 PRK10848 phosphohistidine phos 99.9 1.5E-20 3.4E-25 144.7 14.2 123 9-187 1-123 (159)
32 PRK15416 lipopolysaccharide co 99.8 1.3E-19 2.8E-24 142.9 13.7 125 8-191 54-178 (201)
33 COG2062 SixA Phosphohistidine 99.8 3.1E-19 6.8E-24 136.1 13.0 123 8-186 1-123 (163)
34 KOG0234 Fructose-6-phosphate 2 99.8 4.1E-19 8.8E-24 152.7 12.4 165 6-194 237-405 (438)
35 KOG4609 Predicted phosphoglyce 99.7 1.3E-17 2.7E-22 130.0 10.7 151 7-195 93-248 (284)
36 cd07061 HP_HAP_like Histidine 98.5 5.2E-07 1.1E-11 74.0 7.5 68 9-93 4-75 (242)
37 PF00328 His_Phos_2: Histidine 98.0 2.6E-05 5.7E-10 66.6 7.5 55 38-92 60-117 (347)
38 PRK10173 glucose-1-phosphatase 97.4 0.00093 2E-08 59.1 9.4 83 8-91 32-128 (413)
39 KOG3720 Lysosomal & prostatic 97.3 0.00076 1.7E-08 59.7 7.0 80 9-91 36-127 (411)
40 PRK10172 phosphoanhydride phos 97.2 0.0022 4.8E-08 56.9 9.2 82 9-91 36-130 (436)
41 KOG1057 Arp2/3 complex-interac 95.6 0.019 4E-07 53.6 4.9 53 39-91 510-571 (1018)
42 KOG3672 Histidine acid phospha 93.4 0.33 7.1E-06 42.2 7.0 49 41-89 169-224 (487)
43 KOG1382 Multiple inositol poly 93.4 0.22 4.8E-06 44.2 6.1 55 38-93 130-184 (467)
44 PF14606 Lipase_GDSL_3: GDSL-l 67.6 5 0.00011 31.4 2.6 32 143-174 72-103 (178)
45 PF01764 Lipase_3: Lipase (cla 66.0 26 0.00056 25.3 6.1 39 146-184 45-85 (140)
46 COG0529 CysC Adenylylsulfate k 63.2 26 0.00057 27.6 5.7 67 37-109 68-134 (197)
47 PF07131 DUF1382: Protein of u 62.7 3.7 8.1E-05 25.7 0.8 29 77-106 9-37 (61)
48 COG3845 ABC-type uncharacteriz 50.8 76 0.0017 28.9 7.3 84 76-174 113-200 (501)
49 cd00519 Lipase_3 Lipase (class 49.2 54 0.0012 26.1 5.8 42 143-184 106-149 (229)
50 COG4844 Uncharacterized protei 49.1 5.3 0.00012 25.7 -0.1 28 196-223 28-55 (78)
51 KOG3734 Predicted phosphoglyce 48.7 4.9 0.00011 33.6 -0.4 75 26-107 27-102 (272)
52 COG1134 TagH ABC-type polysacc 46.6 37 0.00081 28.0 4.3 30 145-176 180-209 (249)
53 PLN02517 phosphatidylcholine-s 46.3 51 0.0011 31.0 5.6 46 139-184 187-232 (642)
54 PF12048 DUF3530: Protein of u 45.8 67 0.0015 27.4 6.1 48 143-190 168-218 (310)
55 COG1416 Uncharacterized conser 44.0 56 0.0012 23.5 4.4 40 145-184 13-52 (112)
56 PLN02162 triacylglycerol lipas 42.6 70 0.0015 29.0 5.8 37 147-183 260-298 (475)
57 COG0634 Hpt Hypoxanthine-guani 42.4 53 0.0011 25.6 4.4 34 143-176 13-48 (178)
58 TIGR03729 acc_ester putative p 41.0 64 0.0014 26.0 5.0 40 140-179 140-179 (239)
59 PLN02408 phospholipase A1 39.2 84 0.0018 27.6 5.7 39 146-184 179-221 (365)
60 PLN00413 triacylglycerol lipas 38.8 90 0.0019 28.4 5.9 36 147-182 266-303 (479)
61 PLN02324 triacylglycerol lipas 38.3 82 0.0018 28.1 5.5 37 146-182 194-234 (415)
62 COG1136 SalX ABC-type antimicr 37.7 74 0.0016 25.9 4.8 41 139-180 169-209 (226)
63 PF09370 TIM-br_sig_trns: TIM- 36.9 24 0.00052 29.4 1.9 77 72-179 151-227 (268)
64 KOG2369 Lecithin:cholesterol a 35.7 89 0.0019 28.3 5.3 50 139-188 156-205 (473)
65 PLN02934 triacylglycerol lipas 35.7 1.1E+02 0.0024 28.2 5.9 38 145-182 301-340 (515)
66 PF07819 PGAP1: PGAP1-like pro 34.8 1.3E+02 0.0027 24.3 5.8 44 140-183 55-103 (225)
67 PRK04946 hypothetical protein; 34.0 1.8E+02 0.004 22.7 6.3 48 140-189 101-152 (181)
68 PLN02847 triacylglycerol lipas 33.9 1.1E+02 0.0025 28.7 5.8 43 143-185 229-273 (633)
69 cd00741 Lipase Lipase. Lipase 33.8 68 0.0015 23.7 3.9 41 144-184 7-49 (153)
70 PF00156 Pribosyltran: Phospho 32.3 72 0.0016 22.4 3.7 46 46-94 7-52 (125)
71 cd04256 AAK_P5CS_ProBA AAK_P5C 29.6 90 0.0019 26.3 4.2 31 145-177 30-60 (284)
72 PF02450 LCAT: Lecithin:choles 27.1 1E+02 0.0023 27.1 4.4 44 143-187 98-141 (389)
73 TIGR00824 EIIA-man PTS system, 26.6 81 0.0018 22.5 3.0 19 166-184 3-21 (116)
74 COG1117 PstB ABC-type phosphat 26.3 86 0.0019 25.7 3.3 13 164-176 198-210 (253)
75 PF03610 EIIA-man: PTS system 26.1 58 0.0013 23.0 2.2 19 166-184 1-19 (116)
76 cd00006 PTS_IIA_man PTS_IIA, P 25.5 80 0.0017 22.6 2.9 22 166-187 2-23 (122)
77 PF10116 Host_attach: Protein 24.7 2.8E+02 0.0061 20.2 6.0 42 143-184 70-111 (138)
78 COG2893 ManX Phosphotransferas 24.1 86 0.0019 23.5 2.8 19 166-184 3-21 (143)
79 COG4107 PhnK ABC-type phosphon 24.0 2.5E+02 0.0054 22.3 5.4 49 138-187 177-226 (258)
80 PF05990 DUF900: Alpha/beta hy 24.0 3.9E+02 0.0084 21.6 10.3 49 141-189 69-117 (233)
81 cd07397 MPP_DevT Myxococcus xa 23.5 96 0.0021 25.5 3.2 34 141-177 126-159 (238)
82 CHL00073 chlN photochlorophyll 23.4 2.9E+02 0.0063 25.1 6.5 45 141-185 291-335 (457)
83 COG1125 OpuBA ABC-type proline 23.3 1.3E+02 0.0029 25.3 4.0 27 148-175 171-197 (309)
84 PRK14476 nitrogenase molybdenu 22.8 3.7E+02 0.008 24.3 7.1 93 72-184 239-331 (455)
85 PLN02753 triacylglycerol lipas 22.6 2.2E+02 0.0048 26.4 5.6 37 146-182 288-331 (531)
86 PF06180 CbiK: Cobalt chelatas 21.4 55 0.0012 27.3 1.4 45 133-177 109-154 (262)
87 TIGR01166 cbiO cobalt transpor 21.0 1.8E+02 0.0039 22.3 4.3 27 146-174 161-187 (190)
88 KOG4238 Bifunctional ATP sulfu 20.9 1.8E+02 0.0038 25.8 4.4 82 12-106 73-160 (627)
89 PF13422 DUF4110: Domain of un 20.8 2E+02 0.0044 20.0 4.0 25 137-161 11-35 (96)
90 cd01966 Nitrogenase_NifN_1 Nit 20.6 5.1E+02 0.011 23.0 7.5 43 142-184 278-320 (417)
91 COG1245 Predicted ATPase, RNas 20.6 1.6E+02 0.0035 27.0 4.2 49 132-182 230-281 (591)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=1.2e-39 Score=261.20 Aligned_cols=166 Identities=24% Similarity=0.325 Sum_probs=149.2
Q ss_pred CCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHH
Q 027111 7 LRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 7 ~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
|+++||||||||+.+|..+.++|+. |.|||+.|++||+.+++.|+ +.+++ .|||||+.||+|||++
T Consensus 1 m~~~i~lvRHG~t~~n~~~~~~G~~------d~~Lt~~G~~Qa~~~~~~l~------~~~~~--~i~sSpl~Ra~qTA~~ 66 (203)
T PRK13463 1 MKTTVYVTRHGETEWNVAKRMQGRK------NSALTENGILQAKQLGERMK------DLSIH--AIYSSPSERTLHTAEL 66 (203)
T ss_pred CceEEEEEeCCCCccchhCcccCCC------CCCcCHHHHHHHHHHHHHhc------CCCCC--EEEECCcHHHHHHHHH
Confidence 4688999999999999999998875 89999999999999999998 56888 9999999999999999
Q ss_pred HHHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 027111 87 VASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKDPF-MRPEGGESVNDVVSRLATAMAAMELEF 162 (228)
Q Consensus 87 i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~Es~~~~~~R~~~~l~~l~~~~ 162 (228)
|++.++.+ +.++++|+|+++|.|++.+. .+.+|..+..|+.+|. +.+|+|||+.++..|+..+++.+...+
T Consensus 67 i~~~~~~~-----~~~~~~l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~~~ 141 (203)
T PRK13463 67 IKGERDIP-----IIADEHFYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQSTSGENFEAVHKRVIEGMQLLLEKH 141 (203)
T ss_pred HHhcCCCC-----ceECcCceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCCCCeEHHHHHHHHHHHHHHHHHhC
Confidence 98877665 78999999999999999876 4567888888877775 678899999999999999999998887
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 163 QGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 163 ~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
.+++|+|||||++|+++++++++.+....
T Consensus 142 ~~~~vlvVsHg~~ir~~~~~~~~~~~~~~ 170 (203)
T PRK13463 142 KGESILIVSHAAAAKLLVGHFAGIEIENV 170 (203)
T ss_pred CCCEEEEEeChHHHHHHHHHHhCCCHHHH
Confidence 77899999999999999999999886653
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=9.8e-39 Score=259.97 Aligned_cols=170 Identities=19% Similarity=0.251 Sum_probs=140.1
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++|||||||++.+|..+.++|+. |.|||+.|++||+.+|..|++. +.+++ .|||||+.||+|||++|
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~------D~pLt~~G~~QA~~l~~~L~~~----~~~~d--~i~sSpL~Ra~qTA~~i 68 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWV------DVDLSEKGVEEAKKAGRLIKEA----GLEFD--QAYTSVLTRAIKTLHYA 68 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCC------CCCcCHHHHHHHHHHHHHHHhc----CCCCC--EEEECChHHHHHHHHHH
Confidence 478999999999999999999986 8999999999999999999842 46788 99999999999999999
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHH-HhcccCC------------------------C-CCCC
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEI-WALDEKD------------------------P-FMRP 138 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~-~~~~~~~------------------------~-~~~~ 138 (228)
++..+.. .+++.++++|+|++||.|+|... ...+|+. +..|..+ + .+.+
T Consensus 69 ~~~~~~~--~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (228)
T PRK14116 69 LEESDQL--WIPETKTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRII 146 (228)
T ss_pred HHhcCcC--CCCcccCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCC
Confidence 8765421 12377899999999999999876 3345543 3333322 1 1357
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH-H-cCCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 139 EGGESVNDVVSRLATAMAAMEL-E-FQGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~~-~-~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
|+|||+.++.+|+..++++++. . ..+++|+|||||++|+++++++++++....
T Consensus 147 pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~ 201 (228)
T PRK14116 147 PGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDI 201 (228)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHH
Confidence 9999999999999999999764 3 356899999999999999999999886653
No 3
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=4.1e-38 Score=251.62 Aligned_cols=164 Identities=26% Similarity=0.354 Sum_probs=146.2
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVA 88 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~ 88 (228)
|+||||||||+.+|..+.++|+. |.|||+.|++||+.++..|+ +++++ .|||||+.||+|||++|+
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~------d~pLt~~G~~Qa~~~~~~l~------~~~~~--~i~sSpl~Ra~qTA~~i~ 66 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHA------PTPLTARGIEQAQNLHTLLR------DVPFD--LVLCSELERAQHTARLVL 66 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCC------CCCcCHHHHHHHHHHHHHHh------CCCCC--EEEECchHHHHHHHHHHH
Confidence 57999999999999999999875 89999999999999999998 56888 999999999999999999
Q ss_pred HhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChHHHhcccCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHcCC
Q 027111 89 SVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPEIWALDEKDPF-MRPEGGESVNDVVSRLATAMAAMELEFQG 164 (228)
Q Consensus 89 ~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~~~~~~~~~~~-~~~~~~Es~~~~~~R~~~~l~~l~~~~~~ 164 (228)
+.++.+ +.++++|+|+++|.|++.+.. ..+|+.+..|..++. ..+|+|||+.++..|+..+++++...+.+
T Consensus 67 ~~~~~~-----~~~~~~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~l~~l~~~~~~ 141 (199)
T PRK15004 67 SDRQLP-----VHIIPELNEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSAFQHY 141 (199)
T ss_pred hcCCCC-----ceeChhheeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCCCCcCHHHHHHHHHHHHHHHHHhCCC
Confidence 877655 789999999999999988753 356777777777664 56789999999999999999999987777
Q ss_pred CeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 165 CAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 165 ~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
++|+|||||++++++++++++.+....
T Consensus 142 ~~iliVsHg~~i~~l~~~~~~~~~~~~ 168 (199)
T PRK15004 142 QNLLIVSHQGVLSLLIARLLGMPAEAM 168 (199)
T ss_pred CeEEEEcChHHHHHHHHHHhCCCHHHH
Confidence 899999999999999999999886653
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=8.7e-38 Score=254.55 Aligned_cols=170 Identities=22% Similarity=0.231 Sum_probs=140.3
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++||||||||+.+|..+.++|+. |.|||+.|++||+.+++.|+.. +.+++ .|||||++||+|||++|
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~------D~pLt~~G~~QA~~l~~~L~~~----~~~~d--~i~sSpL~Ra~~TA~~i 68 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWE------DVNLSEQGINEATRAGEKVREN----NIAID--VAFTSLLTRALDTTHYI 68 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCC------CCCcCHHHHHHHHHHHHHHHhc----CCCCC--EEEeCccHHHHHHHHHH
Confidence 468999999999999999999986 8999999999999999999852 45788 99999999999999999
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHH-HhcccCCCC-------------------------CCC
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEI-WALDEKDPF-------------------------MRP 138 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~-~~~~~~~~~-------------------------~~~ 138 (228)
++..+.. .+++.++++|+|++||.|+|.+. ...+|.. +..|..+.. ..+
T Consensus 69 ~~~~~~~--~~~~~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (228)
T PRK14119 69 LTESKQQ--WIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMM 146 (228)
T ss_pred HHhcccC--CCCeeECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccC
Confidence 8764321 11378999999999999999876 3355553 334443311 235
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHc--CCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 139 EGGESVNDVVSRLATAMAAMELEF--QGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~~~~--~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
|+|||+.++..|+..++++++..+ .+++|+|||||++|+++++++++.+....
T Consensus 147 p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~ 201 (228)
T PRK14119 147 PYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDI 201 (228)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHH
Confidence 899999999999999999987664 56899999999999999999999886543
No 5
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1e-37 Score=250.27 Aligned_cols=172 Identities=25% Similarity=0.336 Sum_probs=144.1
Q ss_pred CCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHH
Q 027111 7 LRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 7 ~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
|+++|||||||++.+|..+.++|+. |.|||+.|++||+.+++.|++. +++++ .|||||+.||+|||++
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G~~------d~~Lt~~G~~qA~~~~~~L~~~----~~~~d--~i~sSpl~Ra~qTA~~ 68 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTGWR------DPDLTEQGVAEAKAAGRKLKAA----GLKFD--IAFTSALSRAQHTCQL 68 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCCCC------CCCcCHHHHHHHHHHHHHHHhC----CCCCC--EEEeCCcHHHHHHHHH
Confidence 6789999999999999999998875 8999999999999999999853 56788 9999999999999999
Q ss_pred HHHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHH-HhcccCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHH
Q 027111 87 VASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEI-WALDEKDPFMRPEGGESVNDVVSRLATAM-AAMELE 161 (228)
Q Consensus 87 i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~Es~~~~~~R~~~~l-~~l~~~ 161 (228)
|++.++.+ .+++.++++|+|+++|.|++.+. ...+|.. +..|..++.+.+|+|||+.++..|+..++ +.+..+
T Consensus 69 i~~~~~~~--~~~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~~~~~i~~~ 146 (206)
T PRK01295 69 ILEELGQP--GLETIRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVLPYYLQEILPR 146 (206)
T ss_pred HHHHcCCC--CCCeEECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99987632 12388999999999999999876 3345543 33354555678899999999999999985 566654
Q ss_pred c-CCCeEEEEeChHHHHHHHHHHhCCCCCCCC
Q 027111 162 F-QGCAILVVSHGDPLQILQTLLNAVKQVTEP 192 (228)
Q Consensus 162 ~-~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~ 192 (228)
. .+++|+|||||++|+++++++++.+....+
T Consensus 147 ~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~~ 178 (206)
T PRK01295 147 VLRGERVLVAAHGNSLRALVMVLDGLTPEQIL 178 (206)
T ss_pred ccCCCeEEEEcChHHHHHHHHHHhCCCHHHHh
Confidence 3 568999999999999999999999876543
No 6
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=7e-37 Score=239.98 Aligned_cols=160 Identities=27% Similarity=0.344 Sum_probs=140.5
Q ss_pred EEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHHh
Q 027111 11 YWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVASV 90 (228)
Q Consensus 11 i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~ 90 (228)
||||||||+.+|..+.+ |+. |+|||+.|++||+.+|+.|+ +..++ .|||||+.||+|||+++++.
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~------d~~Lt~~G~~qa~~l~~~l~------~~~~~--~i~sSpl~Ra~qTA~~i~~~ 65 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQT------DVPLAEKGAEQAAALREKLA------DVPFD--AVYSSPLSRCRELAEILAER 65 (177)
T ss_pred CEEEeCCCCccCCCcee-CCC------CCCcChhHHHHHHHHHHHhc------CCCCC--EEEECchHHHHHHHHHHHhh
Confidence 68999999999998887 764 89999999999999999997 56888 99999999999999999998
Q ss_pred cCCCCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHcCCCe
Q 027111 91 LNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKDPF-MRPEGGESVNDVVSRLATAMAAMELEFQGCA 166 (228)
Q Consensus 91 ~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~ 166 (228)
++.+ +.++++|+|+++|.|++.+. .+.+| .+..|..++. +.+|++||+.++..|+..+++++...+.+++
T Consensus 66 ~~~~-----~~~~~~L~E~~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~~~~~~ 139 (177)
T TIGR03162 66 RGLP-----IIKDPRLREMDFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPPGGESFADFYQRVSEFLEELLKAHEGDN 139 (177)
T ss_pred cCCC-----ceECCccccccCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCe
Confidence 7766 78999999999999998865 23455 4556666654 5789999999999999999999998777789
Q ss_pred EEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 167 ILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 167 vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
|+|||||++++++++++++.+....
T Consensus 140 vlvVsHg~~i~~l~~~~~~~~~~~~ 164 (177)
T TIGR03162 140 VLIVTHGGVIRALLAHLLGLPLEQW 164 (177)
T ss_pred EEEEECHHHHHHHHHHHhCCCHHHH
Confidence 9999999999999999999886543
No 7
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=8.3e-37 Score=244.95 Aligned_cols=164 Identities=24% Similarity=0.309 Sum_probs=141.0
Q ss_pred eEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHH
Q 027111 10 KYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVAS 89 (228)
Q Consensus 10 ~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~ 89 (228)
+||||||||+.+|..+.++|+. .|.|||+.|++||+.++++|+ +.+++ .|||||+.||+|||++|++
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~-----~d~~Lt~~G~~qa~~l~~~l~------~~~~~--~i~sSpl~Ra~qTA~~i~~ 67 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRT-----PGVDLDERGREQAAALAERLA------DLPIA--AIVSSPLERCRETAEPIAE 67 (204)
T ss_pred CEEEEeCCCCCccccccccCCC-----CCCCcCHHHHHHHHHHHHHHh------cCCCC--EEEeCcHHHHHHHHHHHHH
Confidence 5899999999999999998875 269999999999999999998 56889 9999999999999999999
Q ss_pred hcCCCCCCCcceecCCcccccCCcccCCCcCCCC-hHHHhcccCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHH-----c
Q 027111 90 VLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKY-PEIWALDEKDPF-MRPEGGESVNDVVSRLATAMAAMELE-----F 162 (228)
Q Consensus 90 ~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~-p~~~~~~~~~~~-~~~~~~Es~~~~~~R~~~~l~~l~~~-----~ 162 (228)
.++.+ +.++++|+|+++|.|+|.+..+.. ...|..|..+|. +.+|+|||+.++..|+..+++.+.+. .
T Consensus 68 ~~~~~-----~~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~~~~~~~~~~~ 142 (204)
T TIGR03848 68 ARGLP-----PRVDERLGECDYGDWTGRELKELAKEPLWPVVQAHPSAAVFPGGESLAQVQARAVAAVREHDARLAAEHG 142 (204)
T ss_pred hcCCC-----ceECcccccCCCCeeCCcCHHHHhCcHHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHhhhccC
Confidence 87765 789999999999999998763322 134555656654 57899999999999999999998765 3
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 163 QGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 163 ~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
.+++|+|||||++|+++++++++.+....
T Consensus 143 ~~~~vliVsHg~~ir~ll~~~lg~~~~~~ 171 (204)
T TIGR03848 143 PDAVWVACSHGDVIKSVLADALGMHLDLF 171 (204)
T ss_pred CCCEEEEEeCChHHHHHHHHHhCCCHHHh
Confidence 46789999999999999999999887643
No 8
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.1e-36 Score=250.34 Aligned_cols=173 Identities=21% Similarity=0.255 Sum_probs=141.1
Q ss_pred CCCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHH
Q 027111 6 FLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAE 85 (228)
Q Consensus 6 ~~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~ 85 (228)
|||++|||||||++.+|..+.++|+. |.|||+.|++||+.+++.|+.. +..++ .|||||+.||+|||+
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~------D~pLTe~G~~QA~~~a~~l~~~----~~~~~--~IysSpl~Ra~qTA~ 69 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWV------DVDLTEKGEAEAKRGGELLAEA----GVLPD--VVYTSLLRRAIRTAN 69 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCC------CCCcCHHHHHHHHHHHHHHHhc----CCCCC--EEEecChHHHHHHHH
Confidence 67899999999999999999998875 8999999999999999999842 34678 999999999999999
Q ss_pred HHHHhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChH-HHhcccCCCCC-----------------------CC
Q 027111 86 VVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPE-IWALDEKDPFM-----------------------RP 138 (228)
Q Consensus 86 ~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~-~~~~~~~~~~~-----------------------~~ 138 (228)
+|++..+.. .+++.++++|+|++||.|++.... +++|. .+..|..++.. ++
T Consensus 70 ~i~~~~~~~--~~~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~ 147 (249)
T PRK14120 70 LALDAADRL--WIPVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVG 147 (249)
T ss_pred HHHHhcccC--CCCeEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCC
Confidence 998754321 123789999999999999998763 35554 35555543221 24
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HHH-cCCCeEEEEeChHHHHHHHHHHhCCCCCCCC
Q 027111 139 EGGESVNDVVSRLATAMAAM-ELE-FQGCAILVVSHGDPLQILQTLLNAVKQVTEP 192 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l-~~~-~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~ 192 (228)
|+|||+.++..|+..+++++ ..+ +.+++|||||||++|+++++++++++.....
T Consensus 148 p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~ 203 (249)
T PRK14120 148 PRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIA 203 (249)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhh
Confidence 89999999999999999985 333 3567899999999999999999998876643
No 9
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=243.91 Aligned_cols=166 Identities=33% Similarity=0.425 Sum_probs=150.2
Q ss_pred CCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHH
Q 027111 7 LRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 7 ~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
|+++||||||||+.+|..+.++|+. |+|||+.|++||+.+++.|+.. ++.++ .|||||+.||+|||++
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G~~------d~pLt~~G~~QA~~l~~~l~~~----~~~~~--~i~sS~l~Ra~~TA~~ 68 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQGWT------DSPLTEEGRAQAEALAERLAAR----DIGFD--AIYSSPLKRAQQTAEP 68 (208)
T ss_pred CceEEEEEecCCccccccccccCCC------CCCCCHHHHHHHHHHHHHHhhc----CCCCC--EEEECchHHHHHHHHH
Confidence 5789999999999999999999864 8999999999999999999953 56788 9999999999999999
Q ss_pred HHHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 027111 87 VASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKDPF-MRPEGGESVNDVVSRLATAMAAMELEF 162 (228)
Q Consensus 87 i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~Es~~~~~~R~~~~l~~l~~~~ 162 (228)
+++.++.+ +.++++|+|+++|.|++... .+.+|..+..|..+|. +.++++||+.++..|+..++.++...+
T Consensus 69 ~a~~~~~~-----~~~~~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~~~~~~ 143 (208)
T COG0406 69 LAEELGLP-----LEVDDRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPPGGESLADVSKRVVAALAELLRSP 143 (208)
T ss_pred HHHhcCCC-----ceecCCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999987 78999999999999999876 4567888888888876 566779999999999999999999987
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCCCCC
Q 027111 163 QGCAILVVSHGDPLQILQTLLNAVKQV 189 (228)
Q Consensus 163 ~~~~vlvVtHg~~i~~l~~~l~~~~~~ 189 (228)
.+++|+|||||++|+++++++++.+..
T Consensus 144 ~~~~vlvVsHg~~ir~l~~~~~~~~~~ 170 (208)
T COG0406 144 PGNNVLVVSHGGVIRALLAYLLGLDLE 170 (208)
T ss_pred CCCeEEEEEChHHHHHHHHHhcCCChh
Confidence 666899999999999999999998865
No 10
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1e-36 Score=247.80 Aligned_cols=171 Identities=25% Similarity=0.296 Sum_probs=141.6
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++||||||||+.+|..+.++|+. |.+||+.|++||+.+|+.|. +.+++ .|||||+.||+|||+.|
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~------D~~Lte~G~~Qa~~l~~~L~------~~~~d--~iysSpl~Ra~qTA~~i 66 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWV------DIPLSQQGIAEAIAAGEKIK------DLPID--CIFTSTLVRSLMTALLA 66 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCC------CCCcCHHHHHHHHHHHHHhh------cCCCC--EEEEcCcHHHHHHHHHH
Confidence 578999999999999999998875 89999999999999999998 56899 99999999999999999
Q ss_pred HHhcC---CC---------------------CCCCcceecCCcccccCCcccCCCc---CCCChHHHh-cccCCCCCCCC
Q 027111 88 ASVLN---LP---------------------FEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWA-LDEKDPFMRPE 139 (228)
Q Consensus 88 ~~~~~---~~---------------------~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~-~~~~~~~~~~~ 139 (228)
++.++ .+ ...+++.++++|+|+++|.|+|.+. .+.+|..+. .|..+..+.+|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p 146 (228)
T PRK01112 67 MTNHSSGKIPYIVHEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPP 146 (228)
T ss_pred HHhhcccccccccccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCC
Confidence 86332 00 1123478899999999999999876 345655433 34444457899
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHc--CCCeEEEEeChHHHHHHHHHHhCCCCCCCC
Q 027111 140 GGESVNDVVSRLATAMAAMELEF--QGCAILVVSHGDPLQILQTLLNAVKQVTEP 192 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~~--~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~ 192 (228)
+|||+.++.+|+..++++++.+. .+++|+|||||++|+++++++++++.+..+
T Consensus 147 ~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~ 201 (228)
T PRK01112 147 QGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVL 201 (228)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh
Confidence 99999999999999999865432 468999999999999999999999877544
No 11
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.8e-36 Score=244.87 Aligned_cols=164 Identities=24% Similarity=0.216 Sum_probs=139.9
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++||||||||+.+|..+.++|+. |.|||+.|++||+.+++.|+ +.+++ .|||||+.||+|||++|
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~------d~~Lt~~G~~qA~~~~~~l~------~~~~~--~I~sSpl~Ra~qTA~~i 66 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQS------DSPLTAKGEQQAMQVAERAK------ELGIT--HIISSDLGRTRRTAEII 66 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCC------CCCcCHHHHHHHHHHHHHHh------cCCCC--EEEECCcHHHHHHHHHH
Confidence 478999999999999998888864 89999999999999999998 56788 99999999999999999
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCcCCCC--hHHHhcc-c-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKY--PEIWALD-E-KDPFMRPEGGESVNDVVSRLATAMAAMELEFQ 163 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~--p~~~~~~-~-~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~ 163 (228)
++.++.+ +.++++|+|+++|.|++....+.. ...|... . ..+.+.+|+|||+.++..|+..+++++...+.
T Consensus 67 ~~~~~~~-----~~~~~~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~~~~ 141 (215)
T PRK03482 67 AQACGCD-----IIFDPRLRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIPEGESMQELSDRMHAALESCLELPQ 141 (215)
T ss_pred HHhcCCC-----eeEChhccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCCCCccHHHHHHHHHHHHHHHHHhCC
Confidence 9988765 789999999999999988653321 1223322 1 23446789999999999999999999987766
Q ss_pred CCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 164 GCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 164 ~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
+++|+|||||++|+++++++++.+...
T Consensus 142 ~~~vliVsHg~~i~~l~~~l~~~~~~~ 168 (215)
T PRK03482 142 GSRPLLVSHGIALGCLVSTILGLPAWA 168 (215)
T ss_pred CCeEEEEeCcHHHHHHHHHHhCCChhh
Confidence 778999999999999999999988764
No 12
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.3e-36 Score=245.91 Aligned_cols=168 Identities=20% Similarity=0.239 Sum_probs=137.7
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVA 88 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~ 88 (228)
|+|||||||++.+|..+.++|+. |.|||+.|++||+.+|+.|++. +..++ .|||||+.||+|||++|+
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~------d~~Lt~~G~~qa~~~~~~l~~~----~~~~d--~i~sSpl~Ra~~TA~~i~ 68 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWR------DVNLTERGVEEAKAAGKKLKEA----GYEFD--IAFTSVLTRAIKTCNIVL 68 (227)
T ss_pred CEEEEEecCCCccccccCcCCCC------CCCCCHHHHHHHHHHHHHHHhc----CCCCC--EEEEeChHHHHHHHHHHH
Confidence 47999999999999999999986 8999999999999999999852 35788 999999999999999998
Q ss_pred HhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChHH-HhcccCC-------------------------CCCCCC
Q 027111 89 SVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPEI-WALDEKD-------------------------PFMRPE 139 (228)
Q Consensus 89 ~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~~-~~~~~~~-------------------------~~~~~~ 139 (228)
+..+.. .+++.++++|+|++||.|+|.+.. ..+|+. +..|..+ +...+|
T Consensus 69 ~~~~~~--~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (227)
T PRK14118 69 EESNQL--WIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVP 146 (227)
T ss_pred HhcCCC--CCCeecCCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCC
Confidence 765421 123778999999999999998763 345543 3333221 123568
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH--cCCCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 140 GGESVNDVVSRLATAMAAMELE--FQGCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~--~~~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
+|||+.++.+|+..++++++.. +.+++|+|||||++|+++++++++.+...
T Consensus 147 ~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~ 199 (227)
T PRK14118 147 DAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDAD 199 (227)
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999997753 35689999999999999999999988654
No 13
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.6e-36 Score=245.96 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=137.9
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++|||||||++.+|..+.++|+. |.|||+.|++||+.+++.|+.. +.+++ .|||||++||+|||+++
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~------D~~Lt~~G~~qa~~~~~~l~~~----~~~~~--~i~sSpl~Ra~~TA~~i 68 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWA------DVDLSEKGTQQAIDAGKLIKEA----GIEFD--LAFTSVLKRAIKTTNLA 68 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCC------CCCcCHHHHHHHHHHHHHHHHc----CCCCC--EEEECCcHHHHHHHHHH
Confidence 478999999999999999999986 8999999999999999999842 45788 99999999999999998
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHH-HhcccCC------------------------C-CCCC
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEI-WALDEKD------------------------P-FMRP 138 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~-~~~~~~~------------------------~-~~~~ 138 (228)
++..+.. .+++.++++|+|+++|.|+|.+. .+.+|.. +..|..+ + ...+
T Consensus 69 ~~~~~~~--~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T PRK14117 69 LEASDQL--WVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVI 146 (230)
T ss_pred HHhcccC--CCCceeCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCCC
Confidence 7533211 12378899999999999999976 3456654 3333322 1 2367
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-HHc-CCCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 139 EGGESVNDVVSRLATAMAAME-LEF-QGCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~-~~~-~~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
|+|||+.++.+|+..++++++ ..+ .+++|+|||||++|+++++++++.+...
T Consensus 147 p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~ 200 (230)
T PRK14117 147 PDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDE 200 (230)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHH
Confidence 899999999999999999976 333 3578999999999999999999987654
No 14
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=1.1e-35 Score=243.95 Aligned_cols=169 Identities=25% Similarity=0.307 Sum_probs=138.8
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVA 88 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~ 88 (228)
|+||||||||+.+|..+.++|+. |.+||+.|++||+.+++.|+.. ++.++ .|||||++||+|||++|+
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~------D~~Lt~~G~~QA~~la~~L~~~----~~~~d--~iysSpl~Ra~qTA~ii~ 68 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWV------DVKLSEKGQQEAKRAGELLKEE----GYEFD--VAYTSLLKRAIHTLNIAL 68 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCC------CCCcCHHHHHHHHHHHHHHHhc----CCCCC--EEEEcChHHHHHHHHHHH
Confidence 57999999999999999998875 8999999999999999999853 45788 999999999999999999
Q ss_pred HhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChHH-HhcccCC-------------------CCC------CCC
Q 027111 89 SVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPEI-WALDEKD-------------------PFM------RPE 139 (228)
Q Consensus 89 ~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~~-~~~~~~~-------------------~~~------~~~ 139 (228)
+.++... .++.++++|+|+++|.|++.... ..+|.. +..|..+ +.+ .+|
T Consensus 69 ~~~~~~~--~~i~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p 146 (245)
T TIGR01258 69 DELDQLW--IPVKKSWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLP 146 (245)
T ss_pred HhcCCCC--CCeeeCcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCC
Confidence 8776321 23778999999999999998762 345543 3334322 111 268
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH--cCCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 140 GGESVNDVVSRLATAMAAMELE--FQGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~--~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
+|||+.++..|+..+++++... ..+++|+|||||++|+++++++++++....
T Consensus 147 ~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~ 200 (245)
T TIGR01258 147 LTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEI 200 (245)
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHH
Confidence 9999999999999999998654 356789999999999999999999887654
No 15
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=1.9e-35 Score=236.52 Aligned_cols=160 Identities=26% Similarity=0.309 Sum_probs=133.1
Q ss_pred CCCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHH
Q 027111 6 FLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAE 85 (228)
Q Consensus 6 ~~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~ 85 (228)
..|++||||||||+.+|..+.++|+. |.|||+.|++||+.++..|+. ..++...|||||+.||+|||+
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~G~~------d~pLt~~G~~QA~~l~~~l~~------~~~~~~~i~sSpl~Ra~qTA~ 70 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHTGRT------ELELTETGRTQAELAGQALGE------LELDDPLVISSPRRRALDTAK 70 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCccCCC------CCCCCHHHHHHHHHHHHHHHh------CCCCCCEEEECchHHHHHHHH
Confidence 35789999999999999999998875 899999999999999999984 455422699999999999999
Q ss_pred HHHHhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 027111 86 VVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEF 162 (228)
Q Consensus 86 ~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~ 162 (228)
++ +.+. +.++++|+|+++|.|+|.... ..+|. |..|. ..+|+|||+.++..|+..+++.+...+
T Consensus 71 ~i----~~~~----~~~~~~LrE~~~G~~eG~~~~ei~~~~~~-~~~~~----~~~p~gES~~~~~~Rv~~~l~~i~~~~ 137 (203)
T PRK13462 71 LA----GLTV----DEVSGLLAEWDYGSYEGLTTPQIRESEPD-WLVWT----HGCPGGESVAQVNERADRAVALALEHM 137 (203)
T ss_pred Hh----cCcc----cccCccccccCCccccCCcHHHHHHhCch-HHhhc----CCCCCCccHHHHHHHHHHHHHHHHHhC
Confidence 88 2221 368999999999999998752 23443 22232 235799999999999999999998877
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 163 QGCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 163 ~~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
.+++|+|||||++|+++++++++.+...
T Consensus 138 ~~~~vliVsHg~vir~ll~~~l~~~~~~ 165 (203)
T PRK13462 138 ESRDVVFVSHGHFSRAVITRWVELPLAE 165 (203)
T ss_pred CCCCEEEEeCCHHHHHHHHHHhCCCHHH
Confidence 7789999999999999999999987654
No 16
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.6e-35 Score=242.06 Aligned_cols=169 Identities=22% Similarity=0.284 Sum_probs=138.9
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVA 88 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~ 88 (228)
|+|||||||++.+|..+.++|+. |.|||+.|++||+.+++.|+.. +++++ .|||||++||+|||++|+
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~------D~pLte~G~~QA~~la~~L~~~----~~~~d--~IysSpl~Ra~qTA~~i~ 68 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWT------DVDLSEKGVSEAKAAGKLLKEE----GYTFD--VAYTSVLKRAIRTLWIVL 68 (247)
T ss_pred CEEEEEECCCcccccccCcCCCC------CCCcCHHHHHHHHHHHHHHHhc----CCCCC--EEEEcCCHHHHHHHHHHH
Confidence 57999999999999999998875 8999999999999999999853 46788 999999999999999999
Q ss_pred HhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChHH-HhcccCC-------------------C------CCCCC
Q 027111 89 SVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPEI-WALDEKD-------------------P------FMRPE 139 (228)
Q Consensus 89 ~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~~-~~~~~~~-------------------~------~~~~~ 139 (228)
+.++... +++.++++|+|++||.|+|.+.. +.+|.. +..|..+ + ...+|
T Consensus 69 ~~~~~~~--~~~~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (247)
T PRK14115 69 DELDQMW--LPVEKSWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELP 146 (247)
T ss_pred HHcCCCC--CCceECccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCC
Confidence 8876421 23789999999999999999763 344443 3333321 1 12478
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH--cCCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 140 GGESVNDVVSRLATAMAAMELE--FQGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~--~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
+|||+.++..|+..++++++.. ..+++|+|||||++|+++++++++.+....
T Consensus 147 ~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~ 200 (247)
T PRK14115 147 LTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEI 200 (247)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHh
Confidence 9999999999999999987542 356899999999999999999999876643
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=4.6e-35 Score=254.63 Aligned_cols=167 Identities=27% Similarity=0.311 Sum_probs=150.9
Q ss_pred CCCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCC-CCCccEEEecCchhHHHHH
Q 027111 6 FLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNI-PLENVRICYSPFSRTTHTA 84 (228)
Q Consensus 6 ~~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~-~~~~~~i~sSp~~Ra~qTA 84 (228)
.++++||||||||+.+|..+.+.|+. |.+||+.|++||+.+++.|. +. +++ .|||||+.||+|||
T Consensus 169 ~~~~~i~LvRHGet~~n~~~~~~g~~------D~~Lt~~G~~QA~~l~~~l~------~~~~~d--~i~sSpl~Ra~qTA 234 (372)
T PRK07238 169 GTPTRLLLLRHGQTELSVQRRYSGRG------NPELTEVGRRQAAAAARYLA------ARGGID--AVVSSPLQRARDTA 234 (372)
T ss_pred CCceEEEEEeCCCCCcccCCeeeCCC------CCCcCHHHHHHHHHHHHHHh------ccCCCC--EEEECChHHHHHHH
Confidence 56799999999999999999998875 89999999999999999998 34 788 99999999999999
Q ss_pred HHHHHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 027111 85 EVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELE 161 (228)
Q Consensus 85 ~~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~ 161 (228)
+++++.++.+ +.++++|+|+++|.|++.+. ...+|..+..|..++.+.+|++||+.++..|+..+++++...
T Consensus 235 ~~i~~~~~~~-----~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~~~~~p~gEs~~~~~~Rv~~~l~~l~~~ 309 (372)
T PRK07238 235 AAAAKALGLD-----VTVDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADTSVAPPGGESFDAVARRVRRARDRLIAE 309 (372)
T ss_pred HHHHHhcCCC-----cEECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999988765 78999999999999998876 347788888888888888899999999999999999999887
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 162 FQGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 162 ~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
+.+++|+|||||++|+++++++++.+....
T Consensus 310 ~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~ 339 (372)
T PRK07238 310 YPGATVLVVSHVTPIKTLLRLALDAGPGVL 339 (372)
T ss_pred CCCCeEEEEEChHHHHHHHHHHhCCCHHHh
Confidence 777899999999999999999999876643
No 18
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=100.00 E-value=4.9e-34 Score=218.89 Aligned_cols=153 Identities=31% Similarity=0.448 Sum_probs=128.2
Q ss_pred eEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHH
Q 027111 10 KYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVAS 89 (228)
Q Consensus 10 ~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~ 89 (228)
+|||||||++.+|..+.+.|+. |+|||+.|+.||+.+++.|... +..++ .|||||+.||+|||+++++
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~------d~~Lt~~G~~qA~~~~~~l~~~----~~~~~--~i~~Sp~~R~~qTA~~~~~ 68 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDS------DPPLTERGREQARQLGEYLAER----DIQID--VIYSSPLRRCIQTAEIIAE 68 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTS------STGBEHHHHHHHHHHHHHHHHT----TSSCS--EEEEESSHHHHHHHHHHHH
T ss_pred CEEEEECCccccccCCCcCCCC------CccccHHHHHHHHhhccccccc----ccCce--EEecCCcchhhhhhchhhc
Confidence 6999999999999988888775 6799999999999999999853 56888 9999999999999999999
Q ss_pred hcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCC-CCCCCCCCCCHHHHHHHHHHHHHHHHH-HcCC
Q 027111 90 VLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKD-PFMRPEGGESVNDVVSRLATAMAAMEL-EFQG 164 (228)
Q Consensus 90 ~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~Es~~~~~~R~~~~l~~l~~-~~~~ 164 (228)
.++.+ +.+++.|+|+++|.|++.+. ...++..+..|..+ ..+.+|++||..++..|+..+++++.. ..++
T Consensus 69 ~~~~~-----~~~~~~l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~ 143 (158)
T PF00300_consen 69 GLGIE-----IIVDPRLREIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPPGGESWEDFQQRVKQFLDELIAYKRPG 143 (158)
T ss_dssp HHTSE-----EEEEGGGSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGSTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccc-----cccccccccccchhhcccchhhHHhhhhcccchhhccccccccccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 88865 89999999999998886654 23445555566553 446788999999999999999999996 5578
Q ss_pred CeEEEEeChHHHHHH
Q 027111 165 CAILVVSHGDPLQIL 179 (228)
Q Consensus 165 ~~vlvVtHg~~i~~l 179 (228)
++|+|||||++|++|
T Consensus 144 ~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 144 ENVLIVSHGGFIRAL 158 (158)
T ss_dssp SEEEEEE-HHHHHHH
T ss_pred CEEEEEecHHHHHhC
Confidence 999999999999875
No 19
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=100.00 E-value=8e-33 Score=212.51 Aligned_cols=150 Identities=33% Similarity=0.406 Sum_probs=124.0
Q ss_pred eEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHH
Q 027111 10 KYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVAS 89 (228)
Q Consensus 10 ~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~ 89 (228)
+|||||||++.+|..+.+.|+ .|.|||+.|++||+.+|+.|.... +..++ .|||||+.||+|||++|++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~------~d~~Lt~~G~~qa~~~a~~l~~~~---~~~~~--~i~sSpl~Ra~qTa~~i~~ 69 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGW------TDSPLTELGRAQAEALGELLASLG---RLRFD--VIYSSPLLRARETAEALAI 69 (155)
T ss_pred CEEEEeCCCCcccccCeEcCC------CCCCCCHHHHHHHHHHHHHHHhcc---CCCCC--EEEeCchHHHHHHHHHHHH
Confidence 589999999999988877765 389999999999999999998421 24777 9999999999999999999
Q ss_pred hcCCCCCCCcceecCCcccccCCcccCCCcCC---CChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHc--CC
Q 027111 90 VLNLPFEGPQCKVMEDLRERFFGPSFELLSHD---KYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEF--QG 164 (228)
Q Consensus 90 ~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~--~~ 164 (228)
.++.+ .+++.|+|+++|.|++....+ .+|..+..| ..+.+|++||+.++..|+..+++++...+ .+
T Consensus 70 ~~~~~------~~~~~L~E~~~G~~~g~~~~~~~~~~~~~~~~~---~~~~~~~gEs~~~~~~Rv~~~~~~i~~~~~~~~ 140 (155)
T smart00855 70 ALGLG------EVDPRLRERDYGAWEGLTKEEERAKAWTRPADW---LGAAPPGGESLADVVERLVRALEELIATHDKSG 140 (155)
T ss_pred hcCCC------CCChhhhhcccceecCCcHHHHHHHHHHHHhcc---CCCCCcCCCCHHHHHHHHHHHHHHHHHhcccCC
Confidence 88764 388999999999999887533 233333322 34678999999999999999999998764 46
Q ss_pred CeEEEEeChHHHHHH
Q 027111 165 CAILVVSHGDPLQIL 179 (228)
Q Consensus 165 ~~vlvVtHg~~i~~l 179 (228)
++|+|||||++++++
T Consensus 141 ~~vlvVtHg~~ir~~ 155 (155)
T smart00855 141 QNVLIVSHGGVIRAL 155 (155)
T ss_pred CeEEEEECCcccccC
Confidence 789999999998753
No 20
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.5e-31 Score=211.55 Aligned_cols=173 Identities=22% Similarity=0.254 Sum_probs=144.2
Q ss_pred CCCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHH
Q 027111 6 FLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAE 85 (228)
Q Consensus 6 ~~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~ 85 (228)
+.+.++++|||||+.||..+.++||. |.+||+.|.+||+.++++|... ++.++ .+|||++.||.|||+
T Consensus 3 ~~~~~lvlvRHGes~wN~e~~~~G~~------D~~Lte~G~~qA~~~~~~l~~~----~~~~~--~~~tS~l~RakqT~~ 70 (214)
T KOG0235|consen 3 SNTFRLVLVRHGESEWNKENIFQGWI------DAPLTEKGEEQAKAAAQRLKDL----NIEFD--VCYTSDLKRAKQTAE 70 (214)
T ss_pred CcceEEEEEecCchhhhhhCcccccc------cCccChhhHHHHHHHHHHHHhc----CCccc--EEecCHHHHHHHHHH
Confidence 34688999999999999999999997 7899999999999999999975 77888 889999999999999
Q ss_pred HHHHhcCCCCCCCcceecCCcccccCCcccCCCcC---CCChHHH--hcc--cCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 027111 86 VVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSH---DKYPEIW--ALD--EKDPFMRPEGGESVNDVVSRLATAMAAM 158 (228)
Q Consensus 86 ~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~---~~~p~~~--~~~--~~~~~~~~~~~Es~~~~~~R~~~~l~~l 158 (228)
.|.+..+.. .+|+..+++|+|+.||.++|+... +.++..+ ..+ .......+|.+||+.++..|+..++++.
T Consensus 71 ~il~~~~~~--~~pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~ 148 (214)
T KOG0235|consen 71 LILEELKQK--KVPVLYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEE 148 (214)
T ss_pred HHHHhhccC--CcceEechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHh
Confidence 999988732 134899999999999999999872 2333221 111 1123346789999999999999999987
Q ss_pred HHH--cCCCeEEEEeChHHHHHHHHHHhCCCCCCCC
Q 027111 159 ELE--FQGCAILVVSHGDPLQILQTLLNAVKQVTEP 192 (228)
Q Consensus 159 ~~~--~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~ 192 (228)
+.. ..+++|+||+||..+++++.++.|...+...
T Consensus 149 i~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i~ 184 (214)
T KOG0235|consen 149 IAKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAIK 184 (214)
T ss_pred hhhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhhh
Confidence 664 3578999999999999999999998877754
No 21
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.97 E-value=7.1e-32 Score=249.41 Aligned_cols=165 Identities=22% Similarity=0.212 Sum_probs=137.2
Q ss_pred CCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHH
Q 027111 7 LRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 7 ~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
.+++||||||||+.+|..++++| |.|||+.|++||+.++++|.... ...++ .|||||++||+|||++
T Consensus 418 ~~m~i~LiRHGeT~~n~~~r~~G--------d~pLt~~G~~qA~~l~~~l~~~~---~~~~~--~V~sSpl~Ra~~TA~~ 484 (664)
T PTZ00322 418 TPMNLYLTRAGEYVDLLSGRIGG--------NSRLTERGRAYSRALFEYFQKEI---STTSF--TVMSSCAKRCTETVHY 484 (664)
T ss_pred CCceEEEEecccchhhhcCccCC--------CCccCHHHHHHHHHHHHHHHhcc---CCCCc--EEEcCCcHHHHHHHHH
Confidence 35689999999999999999976 57999999999999999998420 12345 8999999999999999
Q ss_pred HHHhcCC------------CCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCCCC-CCCCCCCCHHHHH-H
Q 027111 87 VASVLNL------------PFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKDPF-MRPEGGESVNDVV-S 149 (228)
Q Consensus 87 i~~~~~~------------~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~Es~~~~~-~ 149 (228)
|++.... .....++.++++|+|++||.|+|++. .+.+|+.|..|..+|. +++|+|||+.++. .
T Consensus 485 i~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P~GES~~d~~~~ 564 (664)
T PTZ00322 485 FAEESILQQSTASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWPNGECIHQVFNA 564 (664)
T ss_pred HHhccccccccccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCCCCcCHHHHHHH
Confidence 9763100 00112378899999999999999987 4478889999999886 6789999999976 7
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhCC
Q 027111 150 RLATAMAAMELEFQGCAILVVSHGDPLQILQTLLNAV 186 (228)
Q Consensus 150 R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~~ 186 (228)
|+..++.++... .++|+|||||++|+++++++++.
T Consensus 565 R~~~~i~~l~~~--~~~ilvVsHg~vir~ll~~~~~~ 599 (664)
T PTZ00322 565 RLEPHIHDIQAS--TTPVLVVSHLHLLQGLYSYFVTD 599 (664)
T ss_pred HHHHHHHHHHcc--CCCEEEEeCcHHHHHHHHHHhcC
Confidence 999999998543 47899999999999999999986
No 22
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.4e-31 Score=204.83 Aligned_cols=182 Identities=24% Similarity=0.276 Sum_probs=146.7
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++++|+|||||+||..+.|.||. |.+||++|.+||...|+.|++. ++.|| .+|||-+.||++|+.++
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~------Dv~LtekG~~EA~~ag~llk~~----~~~~d--ia~TS~L~RAi~T~~i~ 68 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWV------DVDLTEKGISEAKAAGKLLKEE----GLEFD--IAYTSVLKRAIKTLNIV 68 (230)
T ss_pred CceEEEEecCchhhhhcCceeeee------ecCcchhhHHHHHHHHHHHHHc----CCCcc--eeehHHHHHHHHHHHHH
Confidence 578999999999999999999997 9999999999999999999976 89999 99999999999999999
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCcCC---CCh-HHHhcccCCCCCCC-------------------------
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHD---KYP-EIWALDEKDPFMRP------------------------- 138 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~---~~p-~~~~~~~~~~~~~~------------------------- 138 (228)
.+..+..+ +|+..+.+|+|+.||.+.|+...+ ++- +....|.+.....|
T Consensus 69 L~e~d~~~--ipv~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~~~ 146 (230)
T COG0588 69 LEESDQLW--IPVIKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIGGL 146 (230)
T ss_pred hhhhcccC--cchhhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccccccccccccCC
Confidence 98875543 347889999999999999998733 232 12222222222222
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH--cCCCeEEEEeChHHHHHHHHHHhCCCCCCCCCccccccccccchh
Q 027111 139 EGGESVNDVVSRLATAMAAMELE--FQGCAILVVSHGDPLQILQTLLNAVKQVTEPNCDNLASRIETVRV 206 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~~~--~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 206 (228)
|.+||..+...|+..+|+..+.. ..+++|+||+||..+++++.+|.+++.++.. ++.|+.+...+
T Consensus 147 p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~---~l~IPtg~Plv 213 (230)
T COG0588 147 PLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDIL---DLNIPTGIPLV 213 (230)
T ss_pred CccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhh---hcccCCCCcEE
Confidence 35699999999999999886553 3589999999999999999999999988754 44444444433
No 23
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.96 E-value=4.5e-29 Score=204.12 Aligned_cols=157 Identities=22% Similarity=0.219 Sum_probs=125.8
Q ss_pred cccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHHhcCCCCCCCcc
Q 027111 21 PNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQC 100 (228)
Q Consensus 21 ~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~~~~~~~~i 100 (228)
+|..++++|+. |.|||+.|++||+.+++.|+.. +.+++ .|||||+.||+|||++|++.++.. .+++
T Consensus 1 ~N~~~~~qG~~------D~pLTe~G~~QA~~l~~~L~~~----~~~~d--~iysSpl~Ra~qTA~~i~~~~~~~--~~~~ 66 (236)
T PTZ00123 1 WNKENRFTGWT------DVPLSEKGVQEAREAGKLLKEK----GFRFD--VVYTSVLKRAIKTAWIVLEELGQL--HVPV 66 (236)
T ss_pred CcccCceeCCC------CCCCCHHHHHHHHHHHHHHHhc----CCCCC--EEEECChHHHHHHHHHHHHhcCCC--CCCc
Confidence 47778888885 8999999999999999999843 57888 999999999999999999877632 1237
Q ss_pred eecCCcccccCCcccCCCc---CCCChHH-HhcccCCC-------------------------CCCCCCCCCHHHHHHHH
Q 027111 101 KVMEDLRERFFGPSFELLS---HDKYPEI-WALDEKDP-------------------------FMRPEGGESVNDVVSRL 151 (228)
Q Consensus 101 ~~~~~L~E~~~g~~~~~~~---~~~~p~~-~~~~~~~~-------------------------~~~~~~~Es~~~~~~R~ 151 (228)
.++++|+|+++|.|++... .+.+|.. +..|..+. .+.+|+|||+.++..|+
T Consensus 67 ~~~~~L~E~~~G~~EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv 146 (236)
T PTZ00123 67 IKSWRLNERHYGALQGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERV 146 (236)
T ss_pred eeCchhhhcccccccCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHH
Confidence 8899999999999999876 2344543 22232211 12457999999999999
Q ss_pred HHHHHHHHHH--cCCCeEEEEeChHHHHHHHHHHhCCCCCCC
Q 027111 152 ATAMAAMELE--FQGCAILVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 152 ~~~l~~l~~~--~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
..++++++.. ..+++|+|||||++|+++++++++++....
T Consensus 147 ~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~ 188 (236)
T PTZ00123 147 LPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDI 188 (236)
T ss_pred HHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHH
Confidence 9999997543 346799999999999999999999887644
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.94 E-value=1.1e-25 Score=189.34 Aligned_cols=150 Identities=19% Similarity=0.234 Sum_probs=108.9
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhh--CCCCCCccEEEecCchhHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNE--NNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~--~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
++||||||||+..+ + .. .+++.+||+.|++||+.+|++|++...+ .+..++ .|||||+.||+|||++
T Consensus 103 ~~L~LVRHGq~~~~--~----~~---d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d--~IysSPL~RA~qTAei 171 (299)
T PTZ00122 103 RQIILVRHGQYINE--S----SN---DDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVK--AIYHSDMTRAKETAEI 171 (299)
T ss_pred eEEEEEECCCCCCC--C----CC---CcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCC--EEEEcCcHHHHHHHHH
Confidence 88999999996543 2 11 1123459999999999999999853110 012788 9999999999999999
Q ss_pred HHHhcC-CCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcC--
Q 027111 87 VASVLN-LPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQ-- 163 (228)
Q Consensus 87 i~~~~~-~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~-- 163 (228)
|++.+. .+ +.++++|+|.... .. .|. ...+.++++|+ .++..|+..+++++..+..
T Consensus 172 Ia~~~~~~~-----v~~d~~LrEG~~~--~~------~~~-------~~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~ 230 (299)
T PTZ00122 172 ISEAFPGVR-----LIEDPNLAEGVPC--AP------DPP-------SRGFKPTIEEI-LEDMKRIEAAFEKYFHRPVED 230 (299)
T ss_pred HHHhCCCCC-----ceeCcccccCCcc--cc------Ccc-------ccccCCCcchH-HHHHHHHHHHHHHHHHhcccC
Confidence 998763 33 7899999993211 10 010 01123444555 6779999999999987543
Q ss_pred -CCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 164 -GCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 164 -~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
++.++|||||++|+++++.+++.+...
T Consensus 231 ~~~~vLVVsHGgvIR~ll~~lLglp~~~ 258 (299)
T PTZ00122 231 EDSVEIIVCHGNVIRYLVCRALQLPPEA 258 (299)
T ss_pred CCCeEEEEeCChHHHHHHHHHhCcCHHH
Confidence 356899999999999999999988654
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.93 E-value=2.3e-25 Score=170.43 Aligned_cols=123 Identities=32% Similarity=0.488 Sum_probs=105.1
Q ss_pred eEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHH
Q 027111 10 KYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVAS 89 (228)
Q Consensus 10 ~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~ 89 (228)
+|||||||++.++......+. .|.+||+.|++||+.+++.|... ...++ .|||||+.||+|||+++++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~------~d~~Lt~~G~~qa~~~~~~l~~~----~~~~~--~i~~Sp~~Ra~qTa~~l~~ 68 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGW------TDVPLTEKGREQARALGKRLKEL----GIKFD--RIYSSPLKRAIQTAEIILE 68 (153)
T ss_pred CEEEEECCCCcccccCcccCC------CCCCCCHHHHHHHHHHHHHHHhc----CCCCC--EEEECcHHHHHHHHHHHHH
Confidence 589999999998877654443 48999999999999999999853 34677 9999999999999999998
Q ss_pred hc-CCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEE
Q 027111 90 VL-NLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAIL 168 (228)
Q Consensus 90 ~~-~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vl 168 (228)
.+ +.+ +.+++.|+| .|+..+++.+...+.+++|+
T Consensus 69 ~~~~~~-----~~~~~~L~e----------------------------------------~R~~~~~~~l~~~~~~~~il 103 (153)
T cd07067 69 ELPGLP-----VEVDPRLRE----------------------------------------ARVLPALEELIAPHDGKNVL 103 (153)
T ss_pred hcCCCC-----ceeCccchH----------------------------------------HHHHHHHHHHHHhCCCCeEE
Confidence 87 444 677888877 68999999998876678999
Q ss_pred EEeChHHHHHHHHHHhCCCCC
Q 027111 169 VVSHGDPLQILQTLLNAVKQV 189 (228)
Q Consensus 169 vVtHg~~i~~l~~~l~~~~~~ 189 (228)
||||+++|+.+++++.+.+..
T Consensus 104 iV~H~~~i~~~~~~l~~~~~~ 124 (153)
T cd07067 104 IVSHGGVLRALLAYLLGLSDE 124 (153)
T ss_pred EEeChHHHHHHHHHHhCCCHH
Confidence 999999999999999988754
No 26
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.89 E-value=9.8e-23 Score=158.24 Aligned_cols=175 Identities=21% Similarity=0.205 Sum_probs=127.5
Q ss_pred CceEEEEeCCCCCcccccceecccCCCC-CCCCCCCHhHHHHHHHHHHHHHHHhhhCCCC--CCccEEEecCchhHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGT-RREYQLASEGVDQARLAGELFLKELNENNIP--LENVRICYSPFSRTTHTA 84 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~-~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~--~~~~~i~sSp~~Ra~qTA 84 (228)
-++||||||||..+|+.+.-.-...++. ..|+.||+.||+|+..++..+-+. ++. ++ .|+||||+||+|||
T Consensus 14 ~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~----qL~~~ie--liv~SPMrRtLqT~ 87 (248)
T KOG4754|consen 14 CKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAK----QLPNKIE--LIVVSPMRRTLQTM 87 (248)
T ss_pred ceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhh----hcCCcee--EEEechHHHHHHHH
Confidence 5789999999999998754322111111 249999999999999999877653 666 77 99999999999999
Q ss_pred HHHHHhcCCCC--CCCcceecCCc----cc-ccCCcccCCCc----CCCChHH-Hhccc--CCCCCCCCCCCCHHHHHHH
Q 027111 85 EVVASVLNLPF--EGPQCKVMEDL----RE-RFFGPSFELLS----HDKYPEI-WALDE--KDPFMRPEGGESVNDVVSR 150 (228)
Q Consensus 85 ~~i~~~~~~~~--~~~~i~~~~~L----~E-~~~g~~~~~~~----~~~~p~~-~~~~~--~~~~~~~~~~Es~~~~~~R 150 (228)
.+........- .++|+.+.|.| +| ..--.++.+.. ...||.. |..-. .+|.+.+-..|++++...|
T Consensus 88 v~~f~~~~~e~g~~~~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r 167 (248)
T KOG4754|consen 88 VIAFGGYLAEDGEDPAPVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAAR 167 (248)
T ss_pred HHHhcceeccCCCcCCceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHh
Confidence 99988775543 45678888988 88 32223333322 3345543 11111 2344566778999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhCCCCC
Q 027111 151 LATAMAAMELEFQGCAILVVSHGDPLQILQTLLNAVKQV 189 (228)
Q Consensus 151 ~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~~~~~ 189 (228)
-.++++++... +.+.|.||||+++|+.++..+......
T Consensus 168 ~re~~~~l~~r-~ek~iavvths~fl~~llk~i~k~cd~ 205 (248)
T KOG4754|consen 168 SREFLEWLAKR-PEKEIAVVTHSGFLRSLLKKIQKDCDP 205 (248)
T ss_pred HHHHHHHHHhC-ccceEEEEEehHHHHHHHHHhccccCc
Confidence 99999998765 567899999999999999888765543
No 27
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.6e-22 Score=164.67 Aligned_cols=176 Identities=21% Similarity=0.252 Sum_probs=130.6
Q ss_pred CCCceEEEEeCCCCCcccccc-eec------------------------ccCCCCCCCCCCCHhHHHHHHHHHHHHHHHh
Q 027111 6 FLRNKYWVLRHGKSIPNEKGL-IVS------------------------SLENGTRREYQLASEGVDQARLAGELFLKEL 60 (228)
Q Consensus 6 ~~~~~i~lvRHge~~~n~~~~-~~g------------------------~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~ 60 (228)
.+.+.|+++||||+.++..+. +.. ....++.-|+|||..|..|++.+|+.|.+.
T Consensus 10 ~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a- 88 (272)
T KOG3734|consen 10 DVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNA- 88 (272)
T ss_pred CCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhc-
Confidence 357889999999998755333 100 111233569999999999999999999875
Q ss_pred hhCCCCCCccEEEecCchhHHHHHHHHHHhcCCCCCCCcceecCCcccccCCcccCCCcCCCCh--HH--Hh----cccC
Q 027111 61 NENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYP--EI--WA----LDEK 132 (228)
Q Consensus 61 ~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p--~~--~~----~~~~ 132 (228)
++.++ .+||||..||+|||..|.+.+++.. .+++.++|+|-|+..- ........+. .. .. +...
T Consensus 89 ---~~~i~--~ifcSPs~r~VqTa~~i~~~~g~e~-~~~i~vePgL~e~~~~--~~~~~~p~~is~~el~~~~~~VD~~y 160 (272)
T KOG3734|consen 89 ---GIAID--VIFCSPSLRCVQTAAKIKKGLGIEK-KLKIRVEPGLFEPEKW--PKDGKFPFFISPDELKFPGFPVDLNY 160 (272)
T ss_pred ---CCCcc--eeecCCchhHHHHHHHHHHhhchhc-CeeEEecchhcchhhh--cccCCCCCcCCHHHHhccCCCccccc
Confidence 88888 9999999999999999999988531 2458999999998642 2221111111 11 11 1111
Q ss_pred CCCC--CCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 133 DPFM--RPEGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 133 ~~~~--~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
+|.+ .+..+||++++..|+...+++|..+++++++|||+||..+.++.+.+.|.+...
T Consensus 161 ~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~~~~~ 220 (272)
T KOG3734|consen 161 DPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGLPVRY 220 (272)
T ss_pred chhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCCCcee
Confidence 2222 356789999999999999999999999999999999999999999998855543
No 28
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.89 E-value=3.6e-22 Score=152.18 Aligned_cols=122 Identities=27% Similarity=0.401 Sum_probs=98.5
Q ss_pred eEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHH
Q 027111 10 KYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVAS 89 (228)
Q Consensus 10 ~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~ 89 (228)
+|+|||||++.++..+...+. .|.+||+.|++||+.+|+.|+.. ...++ .|||||+.||+|||+.+++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~------~d~~Lt~~G~~qa~~l~~~l~~~----~~~~~--~v~sSp~~R~~~Ta~~~~~ 68 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGW------GDGPLTEKGRQQARELGKALRER----YIKFD--RIYSSPLKRAIQTAEIILE 68 (153)
T ss_pred CEEEEeCCCCccccCCCccCC------CCCCcCHHHHHHHHHHHHHHHHh----CCCCC--EEEECChHHHHHHHHHHHH
Confidence 489999999998877665444 49999999999999999999863 23667 9999999999999999998
Q ss_pred hcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHc--CCCeE
Q 027111 90 VLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEF--QGCAI 167 (228)
Q Consensus 90 ~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~--~~~~v 167 (228)
.+... +++.+.+. .|+..++.++.... .++++
T Consensus 69 ~~~~~---~~~~~~~~-------------------------------------------~r~~~~~~~~~~~~~~~~~~i 102 (153)
T cd07040 69 GLFEG---LPVEVDPR-------------------------------------------ARVLNALLELLARHLLDGKNV 102 (153)
T ss_pred HhcCC---CCeEECHH-------------------------------------------HHHHHHHHHHHHhhCCCCCEE
Confidence 86311 01333322 78889999988764 46899
Q ss_pred EEEeChHHHHHHHHHHhCCCCC
Q 027111 168 LVVSHGDPLQILQTLLNAVKQV 189 (228)
Q Consensus 168 lvVtHg~~i~~l~~~l~~~~~~ 189 (228)
++|||+++|+.+++++.+.+..
T Consensus 103 liv~H~~~i~~~~~~l~~~~~~ 124 (153)
T cd07040 103 LIVSHGGTIRALLAALLGLSDE 124 (153)
T ss_pred EEEeCCHHHHHHHHHHhCcCHH
Confidence 9999999999999999987754
No 29
>PRK06193 hypothetical protein; Provisional
Probab=99.86 E-value=3.6e-21 Score=152.96 Aligned_cols=136 Identities=21% Similarity=0.225 Sum_probs=101.6
Q ss_pred CCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHH
Q 027111 7 LRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 7 ~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
...+|||||||++.+|..+.+.|..+ .++.|.+||++|++||+.++..|++. +..++ .|||||+.||+|||++
T Consensus 41 ~~~~L~LvRHGet~~n~~~~~~gd~d-~~~~~rpLt~~G~~qA~~l~~~L~~~----~~~~d--~V~sSpl~Ra~qTA~i 113 (206)
T PRK06193 41 KGGYVIYFRHAATDRSQADQDTSDMD-DCSTQRNLSEEGREQARAIGEAFRAL----AIPVG--KVISSPYCRAWETAQL 113 (206)
T ss_pred cCCEEEEEeCccCCCCccCCcccccc-cCcCCCCCCHHHHHHHHHHHHHHHhc----CCCCC--EEEECCcHHHHHHHHH
Confidence 35689999999998888777766542 22346899999999999999999864 66788 9999999999999999
Q ss_pred HHHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCe
Q 027111 87 VASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCA 166 (228)
Q Consensus 87 i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~ 166 (228)
++.....+ +++.+.+. ..+..++...+..|+..+++.+.. ..++
T Consensus 114 l~~~~~~~---------~~l~~~~~-------------------------~~~~~~~~~~y~~~l~~~I~~l~~--~~~~ 157 (206)
T PRK06193 114 AFGRHEKE---------IRLNFLNS-------------------------EPVPAERNALLKAGLRPLLTTPPD--PGTN 157 (206)
T ss_pred HhcccccC---------cccccccc-------------------------cCCChhhHHHHHHHHHHHHhhCCC--CCCe
Confidence 87532211 11111110 012347788888899998888763 5678
Q ss_pred EEEEeChHHHHHHHHHHhC
Q 027111 167 ILVVSHGDPLQILQTLLNA 185 (228)
Q Consensus 167 vlvVtHg~~i~~l~~~l~~ 185 (228)
|++|||+..++.+..++.+
T Consensus 158 vLlVgHnp~i~~l~g~~~~ 176 (206)
T PRK06193 158 TVLVGHDDNLEAATGIYPE 176 (206)
T ss_pred EEEEeCchHHHHHhCCCCc
Confidence 9999999999988886655
No 30
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.86 E-value=6.1e-21 Score=145.98 Aligned_cols=122 Identities=29% Similarity=0.433 Sum_probs=89.8
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVA 88 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~ 88 (228)
|+|||||||++.++.. + +.|.+||+.|++||+.+++.|.+. +..++ .|||||+.||+|||++++
T Consensus 1 m~l~LvRHg~a~~~~~----~------d~dr~Lt~~G~~qa~~~~~~l~~~----~~~~d--~i~sSp~~Ra~qTa~~l~ 64 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----S------DSVRPLTTNGCDESRLVAQWLKGQ----GVEIE--RILVSPFVRAEQTAEIVG 64 (152)
T ss_pred CEEEEEeCCCcccccC----C------CCCCCcCHHHHHHHHHHHHHHHhC----CCCCC--EEEECCcHHHHHHHHHHH
Confidence 4799999999987754 2 248999999999999999999853 46778 999999999999999999
Q ss_pred HhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEE
Q 027111 89 SVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAIL 168 (228)
Q Consensus 89 ~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vl 168 (228)
+.++.+.. +...+.|. | +++..+ +..+++.+... ..++++
T Consensus 65 ~~~~~~~~---~~~~~~l~-------------------------------p-~~~~~~----~~~~l~~~~~~-~~~~vl 104 (152)
T TIGR00249 65 DCLNLPSS---AEVLEGLT-------------------------------P-CGDIGL----VSDYLEALTNE-GVASVL 104 (152)
T ss_pred HHcCCCcc---eEEccCcC-------------------------------C-CCCHHH----HHHHHHHHHhc-CCCEEE
Confidence 98765421 22222221 1 122322 33444444332 346899
Q ss_pred EEeChHHHHHHHHHHhCC
Q 027111 169 VVSHGDPLQILQTLLNAV 186 (228)
Q Consensus 169 vVtHg~~i~~l~~~l~~~ 186 (228)
||+|+..+..++.++.+.
T Consensus 105 iVgH~P~i~~l~~~l~~~ 122 (152)
T TIGR00249 105 LVSHLPLVGYLVAELCPG 122 (152)
T ss_pred EEeCCCCHHHHHHHHhCC
Confidence 999999999999999875
No 31
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.86 E-value=1.5e-20 Score=144.70 Aligned_cols=123 Identities=26% Similarity=0.397 Sum_probs=87.8
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVA 88 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~ 88 (228)
|+|||||||++.++... +.|.|||++|++||+.++.+|... +..++ .|||||+.||+|||++++
T Consensus 1 m~l~lvRHg~a~~~~~~----------d~~rpLt~~G~~qa~~~~~~l~~~----~~~~d--~i~sSp~~Ra~qTa~~l~ 64 (159)
T PRK10848 1 MQVFIMRHGDAALDAAS----------DSVRPLTTCGCDESRLMANWLKGQ----KVDIE--RVLVSPYLRAEQTLEVVG 64 (159)
T ss_pred CEEEEEeCCCCCCCCCC----------CcCCCcCHHHHHHHHHHHHHHHhC----CCCCC--EEEECCHHHHHHHHHHHH
Confidence 47999999999877421 247899999999999999999853 56778 999999999999999999
Q ss_pred HhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEE
Q 027111 89 SVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAIL 168 (228)
Q Consensus 89 ~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vl 168 (228)
+.++.+.. +...+.|.+. .+. ..+...++.+... ..++|+
T Consensus 65 ~~~~~~~~---~~~~~~l~~~--------------------------------~~~----~~~~~~l~~~~~~-~~~~vl 104 (159)
T PRK10848 65 ECLNLPAS---AEVLPELTPC--------------------------------GDV----GLVSAYLQALANE-GVASVL 104 (159)
T ss_pred HHhCCCCc---eEEccCCCCC--------------------------------CCH----HHHHHHHHHHHhc-CCCeEE
Confidence 88765421 2222222111 011 1223334443332 346999
Q ss_pred EEeChHHHHHHHHHHhCCC
Q 027111 169 VVSHGDPLQILQTLLNAVK 187 (228)
Q Consensus 169 vVtHg~~i~~l~~~l~~~~ 187 (228)
||+|...+..+...|.+..
T Consensus 105 lVgH~P~l~~l~~~L~~~~ 123 (159)
T PRK10848 105 VISHLPLVGYLVAELCPGE 123 (159)
T ss_pred EEeCcCcHHHHHHHHhCCC
Confidence 9999999999999988643
No 32
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.83 E-value=1.3e-19 Score=142.88 Aligned_cols=125 Identities=18% Similarity=0.176 Sum_probs=92.0
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
.++||||||||+.....+ .. ..+ +.|||++|++||+.+|+.|++ ....+ .|||||+.||+|||+++
T Consensus 54 ~~~L~LiRHGet~~~~~~----~~--~sD-~RpLTerG~~qA~~lg~~L~~-----~~~~d--~I~sSpa~Ra~qTAe~i 119 (201)
T PRK15416 54 HPVVVLFRHAERCDRSDN----QC--LSD-KTGITVKGTQDARELGKAFSA-----DIPDY--DLYSSNTVRTIQSATWF 119 (201)
T ss_pred CCEEEEEeCccccCccCC----CC--CCC-CCCCCHHHHHHHHHHHHHHhC-----CCCCC--EEEECCCHHHHHHHHHH
Confidence 467999999997311111 10 111 379999999999999999984 22346 89999999999999999
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeE
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAI 167 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~v 167 (228)
++ +.+ +.++++|.|.+.+. ..++.+++.+.++++|
T Consensus 120 a~--~~~-----v~~~~~Lye~~~~~--------------------------------------~~~i~~~i~~~~~~tV 154 (201)
T PRK15416 120 SA--GKK-----LTVDKRLSDCGNGI--------------------------------------YSAIKDLQRKSPDKNI 154 (201)
T ss_pred hc--CCC-----cEecHHHhhcCchh--------------------------------------HHHHHHHHHhCCCCEE
Confidence 87 222 67788887776432 2335556566666899
Q ss_pred EEEeChHHHHHHHHHHhCCCCCCC
Q 027111 168 LVVSHGDPLQILQTLLNAVKQVTE 191 (228)
Q Consensus 168 lvVtHg~~i~~l~~~l~~~~~~~~ 191 (228)
+||+|+..+..+.....+.+....
T Consensus 155 LIVGHnp~i~~La~~~~~~~~~~~ 178 (201)
T PRK15416 155 VIFTHNHCLTYIAKDKRGVKFKPD 178 (201)
T ss_pred EEEeCchhHHHHHHHhcCCCCCCC
Confidence 999999999999998776665543
No 33
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.82 E-value=3.1e-19 Score=136.12 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=91.0
Q ss_pred CceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHH
Q 027111 8 RNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVV 87 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i 87 (228)
|++|||+|||++.+...+.- |.|.+||++|+++++..|+.|++. +..+| .|+|||+.||+|||+++
T Consensus 1 m~~L~LmRHgkA~~~~~~~~--------D~dR~Lt~~G~~ea~~~a~~L~~~----~~~~D--~VL~Spa~Ra~QTae~v 66 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGIA--------DFDRPLTERGRKEAELVAAWLAGQ----GVEPD--LVLVSPAVRARQTAEIV 66 (163)
T ss_pred CceEEEeecccccccCCCCC--------CccCcCCHHHHHHHHHHHHHHHhc----CCCCC--EEEeChhHHHHHHHHHH
Confidence 68999999999988876522 359999999999999999999986 77788 99999999999999999
Q ss_pred HHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeE
Q 027111 88 ASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAI 167 (228)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~v 167 (228)
++.++... .++.+ |..++ +.. ..+.+.++.+.+ .-.++
T Consensus 67 ~~~~~~~~----~~~~~---~l~p~----------------------------~d~-----~~~l~~l~~~~d--~v~~v 104 (163)
T COG2062 67 AEHLGEKK----VEVFE---ELLPN----------------------------GDP-----GTVLDYLEALGD--GVGSV 104 (163)
T ss_pred HHhhCccc----ceecc---ccCCC----------------------------CCH-----HHHHHHHHHhcc--cCceE
Confidence 99987321 11111 11111 000 112233443333 24789
Q ss_pred EEEeChHHHHHHHHHHhCC
Q 027111 168 LVVSHGDPLQILQTLLNAV 186 (228)
Q Consensus 168 lvVtHg~~i~~l~~~l~~~ 186 (228)
++|+|...+..+...+.+.
T Consensus 105 llVgH~P~l~~l~~~L~~~ 123 (163)
T COG2062 105 LLVGHNPLLEELALLLAGG 123 (163)
T ss_pred EEECCCccHHHHHHHHccc
Confidence 9999999999999999875
No 34
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.80 E-value=4.1e-19 Score=152.66 Aligned_cols=165 Identities=27% Similarity=0.347 Sum_probs=138.0
Q ss_pred CCCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHH
Q 027111 6 FLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAE 85 (228)
Q Consensus 6 ~~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~ 85 (228)
..+++|||.||||+..|..++..| |.+|+++|.+-|+.+++++..+ ...++.++||++.||+|||+
T Consensus 237 ~~pR~i~l~r~geS~~n~~grigg--------ds~ls~~g~~ya~~l~~f~~~~------~~~dl~vwts~~~rti~ta~ 302 (438)
T KOG0234|consen 237 TTPRTIYLTRHGESEFNVEGRIGG--------DSPLSERGSQYAKSLIKFVEEQ------SSSDLDVWTSQRKRTIQTAE 302 (438)
T ss_pred cCCceEEEEecCCCccccccccCC--------cccccHHHHHHHHHHHHHHhhh------cccCceeccchHHHHhhhHh
Confidence 457899999999999999988754 8999999999999999998864 33345899999999999999
Q ss_pred HHHHhcCCCCCCCcceecCCcccccCCcccCCCc---CCCChHHHhcccCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHH
Q 027111 86 VVASVLNLPFEGPQCKVMEDLRERFFGPSFELLS---HDKYPEIWALDEKDPF-MRPEGGESVNDVVSRLATAMAAMELE 161 (228)
Q Consensus 86 ~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~Es~~~~~~R~~~~l~~l~~~ 161 (228)
.+. .+.. +..+..|+|.+.|.++|+.. ...+|..+.....|+. ++.|+|||+.|+..|....+-.+..+
T Consensus 303 ~l~----~~~~---~~~~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~~gESy~D~v~RlePvImElEr~ 375 (438)
T KOG0234|consen 303 GLK----LDYS---VEQWKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYPGGESYSDLVQRLEPVIMELERQ 375 (438)
T ss_pred hcC----cchh---hhhHhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecCCCCCHHHHHHhhhhHhHhhhhc
Confidence 442 2211 35778899999999999876 5578888887777776 78999999999999999999888763
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCCCCCCCCc
Q 027111 162 FQGCAILVVSHGDPLQILQTLLNAVKQVTEPNC 194 (228)
Q Consensus 162 ~~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~~~ 194 (228)
.+|+|+||..+|++++.++++.+....+.+
T Consensus 376 ---~~Vlvi~Hqavircll~Yf~~~~~~e~p~l 405 (438)
T KOG0234|consen 376 ---ENVLVITHQAVIRCLLAYFLNCSPVELPYL 405 (438)
T ss_pred ---ccEEEEecHHHHHHHHHHHhcCCHhhcccc
Confidence 349999999999999999999998876644
No 35
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.75 E-value=1.3e-17 Score=130.04 Aligned_cols=151 Identities=17% Similarity=0.155 Sum_probs=107.3
Q ss_pred CCceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHH
Q 027111 7 LRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEV 86 (228)
Q Consensus 7 ~~~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~ 86 (228)
.++.|+||||||-. ..+. -..||+.|++||+.+|.+|++. +++|+ .+..|.|.||.|||.+
T Consensus 93 atRhI~LiRHgeY~--~~g~-----------~~hLTelGReQAE~tGkRL~el----glk~d--~vv~StM~RA~ETadI 153 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYH--VDGS-----------LEHLTELGREQAELTGKRLAEL----GLKFD--KVVASTMVRATETADI 153 (284)
T ss_pred hhceEEEEecccee--ccCc-----------hhhcchhhHHHHHHHhHHHHHc----CCchh--hhhhhhhhhhHHHHHH
Confidence 46789999999953 3222 2489999999999999999987 99999 9999999999999999
Q ss_pred HHHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHc----
Q 027111 87 VASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEF---- 162 (228)
Q Consensus 87 i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~---- 162 (228)
|.+++..+. +..--+.|+|-.. +...+... .| + |..--+..-..|+..+++++..+.
T Consensus 154 Ilk~l~d~l---k~~s~~ll~EGaP--~ppdPp~k----~w---------r-p~~~qy~rdgaRIEaafRryfhRA~p~Q 214 (284)
T KOG4609|consen 154 ILKHLPDDL---KRVSCPLLREGAP--YPPDPPVK----HW---------R-PLDPQYYRDGARIEAAFRRYFHRASPSQ 214 (284)
T ss_pred HHHhCCCcc---ceecccccccCCC--CCCCCCcc----cC---------C-ccChHhhhcchHHHHHHHHHHhhcCccc
Confidence 999987442 2444555666421 11111100 00 1 111122333468889998877642
Q ss_pred -CCCeEEEEeChHHHHHHHHHHhCCCCCCCCCcc
Q 027111 163 -QGCAILVVSHGDPLQILQTLLNAVKQVTEPNCD 195 (228)
Q Consensus 163 -~~~~vlvVtHg~~i~~l~~~l~~~~~~~~~~~~ 195 (228)
++.-.+||+|+.+|+-++|..+.++++.+.+++
T Consensus 215 eedSy~liV~HaNVIRY~icRALq~PpegWlR~n 248 (284)
T KOG4609|consen 215 EEDSYELIVCHANVIRYFICRALQFPPEGWLRMN 248 (284)
T ss_pred ccccEEEEEeecchhhhhhhhhhcCCcchhheec
Confidence 123479999999999999999999998765554
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.47 E-value=5.2e-07 Score=73.98 Aligned_cols=68 Identities=25% Similarity=0.190 Sum_probs=54.8
Q ss_pred ceEEEEeCCCCCcccccceecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCC----CCCCccEEEecCchhHHHHH
Q 027111 9 NKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKELNENN----IPLENVRICYSPFSRTTHTA 84 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~----~~~~~~~i~sSp~~Ra~qTA 84 (228)
.-.++.|||++.. ..||..|++|+..+|..|++.+.... .....+.+++|+..||+|||
T Consensus 4 ~v~~~~RHg~r~p-----------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa 66 (242)
T cd07061 4 QVQVLSRHGDRYP-----------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSA 66 (242)
T ss_pred EEEEEEecCCCCc-----------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHH
Confidence 3478999999843 48999999999999999998765432 23345689999999999999
Q ss_pred HHHHHhcCC
Q 027111 85 EVVASVLNL 93 (228)
Q Consensus 85 ~~i~~~~~~ 93 (228)
+.++.++--
T Consensus 67 ~~~~~gl~~ 75 (242)
T cd07061 67 QAFLAGLFP 75 (242)
T ss_pred HHHHHhcCC
Confidence 999988743
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.96 E-value=2.6e-05 Score=66.55 Aligned_cols=55 Identities=22% Similarity=0.182 Sum_probs=44.6
Q ss_pred CCCCCHhHHHHHHHHHHHHHHHhhh---CCCCCCccEEEecCchhHHHHHHHHHHhcC
Q 027111 38 EYQLASEGVDQARLAGELFLKELNE---NNIPLENVRICYSPFSRTTHTAEVVASVLN 92 (228)
Q Consensus 38 d~~Lt~~G~~qa~~~~~~l~~~~~~---~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~ 92 (228)
...||+.|.+|...+|++|++.+.. .....+.+.++||...||++||+.++.++=
T Consensus 60 ~g~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 60 WGQLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp TTSBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 3459999999999999999988652 222335678999999999999999988763
No 38
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=97.45 E-value=0.00093 Score=59.12 Aligned_cols=83 Identities=17% Similarity=0.123 Sum_probs=58.9
Q ss_pred CceEEEEeCCCCCccccc-c-e-----ecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCC-------CCccEEE
Q 027111 8 RNKYWVLRHGKSIPNEKG-L-I-----VSSLENGTRREYQLASEGVDQARLAGELFLKELNENNIP-------LENVRIC 73 (228)
Q Consensus 8 ~~~i~lvRHge~~~n~~~-~-~-----~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~-------~~~~~i~ 73 (228)
.+-+++-|||-+..-... . . ..|..|.. +.-.||.+|..+...+|+++++.+.+.++- .+.+.++
T Consensus 32 ~~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~-~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~ 110 (413)
T PRK10173 32 QQVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDV-PGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAY 110 (413)
T ss_pred EEEEEEeecccCCCCCCcchhhhhcCCCCCCCCCC-CcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEE
Confidence 344889999997654332 1 1 12332222 456699999999999999999887654432 2247899
Q ss_pred ecCchhHHHHHHHHHHhc
Q 027111 74 YSPFSRTTHTAEVVASVL 91 (228)
Q Consensus 74 sSp~~Ra~qTA~~i~~~~ 91 (228)
+++..||++||+.++.++
T Consensus 111 a~~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 111 ANSLQRTVATAQFFITGA 128 (413)
T ss_pred eCCchHHHHHHHHHHHhc
Confidence 999999999998887654
No 39
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=97.28 E-value=0.00076 Score=59.68 Aligned_cols=80 Identities=23% Similarity=0.212 Sum_probs=53.9
Q ss_pred ceEEEEeCCCCCc-cc---ccceec--ccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCC------CCCCccEEEecC
Q 027111 9 NKYWVLRHGKSIP-NE---KGLIVS--SLENGTRREYQLASEGVDQARLAGELFLKELNENN------IPLENVRICYSP 76 (228)
Q Consensus 9 ~~i~lvRHge~~~-n~---~~~~~g--~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~------~~~~~~~i~sSp 76 (228)
..-++-|||.+.. +. ...+.. +-+.| --.||+.|..|+..+|+.|+..+...+ ...+.+.|.||+
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G---~GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd 112 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRG---WGQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTD 112 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCC---cchhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCC
Confidence 4456779999864 11 111110 00011 246999999999999999998433322 233456899999
Q ss_pred chhHHHHHHHHHHhc
Q 027111 77 FSRTTHTAEVVASVL 91 (228)
Q Consensus 77 ~~Ra~qTA~~i~~~~ 91 (228)
..||+.||+.++.++
T Consensus 113 ~nRtl~SAqs~laGl 127 (411)
T KOG3720|consen 113 VNRTLMSAQSVLAGL 127 (411)
T ss_pred ccHHHHHHHHHHHhh
Confidence 999999999998765
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=97.22 E-value=0.0022 Score=56.85 Aligned_cols=82 Identities=20% Similarity=0.135 Sum_probs=55.4
Q ss_pred ceEEEEeCCCCCcccccce------ecccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCC-------CCCccEEEec
Q 027111 9 NKYWVLRHGKSIPNEKGLI------VSSLENGTRREYQLASEGVDQARLAGELFLKELNENNI-------PLENVRICYS 75 (228)
Q Consensus 9 ~~i~lvRHge~~~n~~~~~------~g~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~-------~~~~~~i~sS 75 (228)
+-+++-|||-+........ ..|..|.. ..-.||.+|..|...+|+++++.+.+.++ ..+.+.++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~-~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~ 114 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPV-KLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIAD 114 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCC-CcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeC
Confidence 3367889999865432110 11221111 23569999999999999999988765322 2234678899
Q ss_pred CchhHHHHHHHHHHhc
Q 027111 76 PFSRTTHTAEVVASVL 91 (228)
Q Consensus 76 p~~Ra~qTA~~i~~~~ 91 (228)
+..||+.||+.+..++
T Consensus 115 ~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 115 VDQRTRKTGEAFLAGL 130 (436)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999998886654
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=95.63 E-value=0.019 Score=53.61 Aligned_cols=53 Identities=25% Similarity=0.172 Sum_probs=41.2
Q ss_pred CCCCHhHHHHHHHHHHHHHHHhhh-CC--------CCCCccEEEecCchhHHHHHHHHHHhc
Q 027111 39 YQLASEGVDQARLAGELFLKELNE-NN--------IPLENVRICYSPFSRTTHTAEVVASVL 91 (228)
Q Consensus 39 ~~Lt~~G~~qa~~~~~~l~~~~~~-~~--------~~~~~~~i~sSp~~Ra~qTA~~i~~~~ 91 (228)
-.||..|+.||+++|+.++..+-. .| .-..++.||+|...|.+.||+.+++++
T Consensus 510 GelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 510 GELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred CEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 469999999999999999864210 00 011256899999999999999999876
No 42
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=93.43 E-value=0.33 Score=42.17 Aligned_cols=49 Identities=20% Similarity=0.291 Sum_probs=38.8
Q ss_pred CCHhHHHHHHHHHHHHHHHhh-------hCCCCCCccEEEecCchhHHHHHHHHHH
Q 027111 41 LASEGVDQARLAGELFLKELN-------ENNIPLENVRICYSPFSRTTHTAEVVAS 89 (228)
Q Consensus 41 Lt~~G~~qa~~~~~~l~~~~~-------~~~~~~~~~~i~sSp~~Ra~qTA~~i~~ 89 (228)
||.+|..|--.+|+++...+. .++...+..+++|+-+.||.|+|-.+.=
T Consensus 169 LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf 224 (487)
T KOG3672|consen 169 LTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLF 224 (487)
T ss_pred eeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHH
Confidence 899999999999998876533 2334455567999999999999988743
No 43
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=93.36 E-value=0.22 Score=44.17 Aligned_cols=55 Identities=22% Similarity=0.016 Sum_probs=43.1
Q ss_pred CCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHHhcCC
Q 027111 38 EYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVASVLNL 93 (228)
Q Consensus 38 d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~~ 93 (228)
+..|...|++.|...++.+.+++.+ --..+...|+++-..||..||+.++.++..
T Consensus 130 ~~~l~~~g~~~a~R~~r~f~~~y~~-~~n~~~y~i~tt~~~R~~dSA~~F~~GLfg 184 (467)
T KOG1382|consen 130 VDQLEDEGRMLAKRLARRFPALYYE-LENPTVYNINTTASQRVVDSAQAFAYGLFG 184 (467)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHh-hcCCceEEeeccchHHHHHHHHHHHhhhcc
Confidence 4457788999999999998887622 123334469999999999999999998863
No 44
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=67.61 E-value=5 Score=31.36 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEEeChH
Q 027111 143 SVNDVVSRLATAMAAMELEFQGCAILVVSHGD 174 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~ 174 (228)
+.+++..|+..|++.+.+.++...|++|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 44588999999999999999999999999744
No 45
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=66.04 E-value=26 Score=25.32 Aligned_cols=39 Identities=13% Similarity=0.248 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEeCh--HHHHHHHHHHh
Q 027111 146 DVVSRLATAMAAMELEFQGCAILVVSHG--DPLQILQTLLN 184 (228)
Q Consensus 146 ~~~~R~~~~l~~l~~~~~~~~vlvVtHg--~~i~~l~~~l~ 184 (228)
....++.+.++++.++++..+|++++|+ +.+..++...+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 5667888888888888877899999994 55555554444
No 46
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=63.16 E-value=26 Score=27.57 Aligned_cols=67 Identities=15% Similarity=0.025 Sum_probs=41.6
Q ss_pred CCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHHhcCCCCCCCcceecCCcccc
Q 027111 37 REYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRER 109 (228)
Q Consensus 37 ~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~~~~~~~~i~~~~~L~E~ 109 (228)
.|.+-|.+++.+--.---.++.+++++++-.= .-|-||+....|-|..+.+.- ..++|.++--|.++
T Consensus 68 ~dLgFs~edR~eniRRvaevAkll~daG~ivi--va~ISP~r~~R~~aR~~~~~~----~FiEVyV~~pl~vc 134 (197)
T COG0529 68 RDLGFSREDRIENIRRVAEVAKLLADAGLIVI--VAFISPYREDRQMARELLGEG----EFIEVYVDTPLEVC 134 (197)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHCCeEEE--EEeeCccHHHHHHHHHHhCcC----ceEEEEeCCCHHHH
Confidence 37788888865543322334444555565433 677899999999999887642 11236666655554
No 47
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=62.73 E-value=3.7 Score=25.68 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=20.9
Q ss_pred chhHHHHHHHHHHhcCCCCCCCcceecCCc
Q 027111 77 FSRTTHTAEVVASVLNLPFEGPQCKVMEDL 106 (228)
Q Consensus 77 ~~Ra~qTA~~i~~~~~~~~~~~~i~~~~~L 106 (228)
+++|+++|..+++ .|+.+.++|+..+..+
T Consensus 9 LR~~lE~A~~La~-~GIRFVpiPv~~dee~ 37 (61)
T PF07131_consen 9 LRKALEMAHSLAH-IGIRFVPIPVVTDEEF 37 (61)
T ss_pred HHHHHHHHHHHHH-cCceeeccccccHHHH
Confidence 6889999997776 4877666666555543
No 48
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=50.82 E-value=76 Score=28.94 Aligned_cols=84 Identities=11% Similarity=0.110 Sum_probs=48.3
Q ss_pred CchhHHHHHHHHHHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCC---CCCCC-CCCHHHHHHHH
Q 027111 76 PFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPF---MRPEG-GESVNDVVSRL 151 (228)
Q Consensus 76 p~~Ra~qTA~~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~---~~~~~-~Es~~~~~~R~ 151 (228)
....+.+-++.+.+.++++ +..+....+...|.- +.=+.....+.++. +..|. .-+..++ ++.
T Consensus 113 ~~~~~~~~i~~l~~~yGl~-----vdp~~~V~dLsVG~q-------QRVEIlKaLyr~a~iLILDEPTaVLTP~E~-~~l 179 (501)
T COG3845 113 DRRQARARIKELSERYGLP-----VDPDAKVADLSVGEQ-------QRVEILKALYRGARLLILDEPTAVLTPQEA-DEL 179 (501)
T ss_pred CHHHHHHHHHHHHHHhCCC-----CCccceeecCCcchh-------HHHHHHHHHhcCCCEEEEcCCcccCCHHHH-HHH
Confidence 4567777888888888887 344555555555542 22234444444443 12222 2233333 345
Q ss_pred HHHHHHHHHHcCCCeEEEEeChH
Q 027111 152 ATAMAAMELEFQGCAILVVSHGD 174 (228)
Q Consensus 152 ~~~l~~l~~~~~~~~vlvVtHg~ 174 (228)
...++.+.+ .+++|+++||--
T Consensus 180 f~~l~~l~~--~G~tIi~ITHKL 200 (501)
T COG3845 180 FEILRRLAA--EGKTIIFITHKL 200 (501)
T ss_pred HHHHHHHHH--CCCEEEEEeccH
Confidence 555666665 678999999963
No 49
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=49.24 E-value=54 Score=26.13 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEEeCh--HHHHHHHHHHh
Q 027111 143 SVNDVVSRLATAMAAMELEFQGCAILVVSHG--DPLQILQTLLN 184 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg--~~i~~l~~~l~ 184 (228)
++..+...+...++.+.+++++..|++++|+ +.+..++...+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 4566667777777777777788899999994 55555554443
No 50
>COG4844 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.08 E-value=5.3 Score=25.75 Aligned_cols=28 Identities=25% Similarity=0.151 Sum_probs=24.7
Q ss_pred ccccccccchhcchhhhhhhcccccccc
Q 027111 196 NLASRIETVRVHNILSQHRKNALLTGEL 223 (228)
Q Consensus 196 ~l~~~~~~~~~~~~~~~~~~~~~~~~e~ 223 (228)
++.+...+....|+++..+.|+++.||+
T Consensus 28 ~lDvlEYgCLt~Cg~Ca~~lfALVnGev 55 (78)
T COG4844 28 NLDVLEYGCLTHCGICAASLFALVNGEV 55 (78)
T ss_pred CccchhhhhHhhhhhHHHhHHHHhcCce
Confidence 5667778889999999999999999986
No 51
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=48.72 E-value=4.9 Score=33.56 Aligned_cols=75 Identities=11% Similarity=0.031 Sum_probs=52.9
Q ss_pred ceec-ccCCCCCCCCCCCHhHHHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHHhcCCCCCCCcceecC
Q 027111 26 LIVS-SLENGTRREYQLASEGVDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQCKVME 104 (228)
Q Consensus 26 ~~~g-~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~~~~~~~~i~~~~ 104 (228)
.+.+ |...-...|.++.+.|..-+..+.++..+. .+.++|+ =|..|+..+|.+||..+..+...... +...|
T Consensus 27 if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~---~~y~~d~-pit~~g~~~~~~~gr~l~~a~~~i~~---ifcSP 99 (272)
T KOG3734|consen 27 IFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSP---KGYPIDP-PITVSGFIQCKLIGRELLNAGIAIDV---IFCSP 99 (272)
T ss_pred ccchhhhhhhcCCCCCcCCCCccCCccccccccCc---ccCccCC-CccchhHHHHHHHHHHHHhcCCCcce---eecCC
Confidence 4445 555333347889999999998888885433 2677883 39999999999999999887544322 55666
Q ss_pred Ccc
Q 027111 105 DLR 107 (228)
Q Consensus 105 ~L~ 107 (228)
.++
T Consensus 100 s~r 102 (272)
T KOG3734|consen 100 SLR 102 (272)
T ss_pred chh
Confidence 666
No 52
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=46.62 E-value=37 Score=27.98 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEeChHHH
Q 027111 145 NDVVSRLATAMAAMELEFQGCAILVVSHGDPL 176 (228)
Q Consensus 145 ~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i 176 (228)
..|++++.+-++++.++ +.++++|||..-.
T Consensus 180 ~~F~~K~~~rl~e~~~~--~~tiv~VSHd~~~ 209 (249)
T COG1134 180 AAFQEKCLERLNELVEK--NKTIVLVSHDLGA 209 (249)
T ss_pred HHHHHHHHHHHHHHHHc--CCEEEEEECCHHH
Confidence 47888999989988774 4899999998644
No 53
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=46.26 E-value=51 Score=30.97 Aligned_cols=46 Identities=20% Similarity=0.284 Sum_probs=34.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHh
Q 027111 139 EGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~ 184 (228)
...|...++..|++..++.+.....++.|+||+|..--..++..|.
T Consensus 187 ~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 187 QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 3456678888999999988877665789999999876655554443
No 54
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=45.83 E-value=67 Score=27.37 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHHHHH---HcCCCeEEEEeChHHHHHHHHHHhCCCCCC
Q 027111 143 SVNDVVSRLATAMAAMEL---EFQGCAILVVSHGDPLQILQTLLNAVKQVT 190 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~---~~~~~~vlvVtHg~~i~~l~~~l~~~~~~~ 190 (228)
.......|+..-+..+.. ++.+++++||+||.--..++.++.......
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~ 218 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPM 218 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcc
Confidence 344444444444444333 345677999999999999999998766543
No 55
>COG1416 Uncharacterized conserved protein [Function unknown]
Probab=44.03 E-value=56 Score=23.45 Aligned_cols=40 Identities=20% Similarity=0.249 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHh
Q 027111 145 NDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 145 ~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~ 184 (228)
.+-...+...+.++.+..+...|.||-||..+.++....-
T Consensus 13 ~~k~~~~l~Nl~Nll~~~p~~~IeVV~~g~ai~~l~~~~~ 52 (112)
T COG1416 13 ESKVNMVLGNLTNLLEDDPSVEIEVVAHGPAIAFLSEKAN 52 (112)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEeCchhHHhhhhcc
Confidence 3445556666666776667788999999999998876443
No 56
>PLN02162 triacylglycerol lipase
Probab=42.63 E-value=70 Score=29.05 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEeC--hHHHHHHHHHH
Q 027111 147 VVSRLATAMAAMELEFQGCAILVVSH--GDPLQILQTLL 183 (228)
Q Consensus 147 ~~~R~~~~l~~l~~~~~~~~vlvVtH--g~~i~~l~~~l 183 (228)
.+..+.+.+++++.++++..++|++| |+++..+....
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHH
Confidence 34566777777777788889999999 88888876543
No 57
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=42.40 E-value=53 Score=25.64 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEEe--ChHHH
Q 027111 143 SVNDVVSRLATAMAAMELEFQGCAILVVS--HGDPL 176 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~~~~~~~vlvVt--Hg~~i 176 (228)
|.+++..|+++..+++.+.+.+++.++|+ +|.++
T Consensus 13 see~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~ 48 (178)
T COG0634 13 SEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFP 48 (178)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchh
Confidence 67899999999999999998888877777 56554
No 58
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=41.02 E-value=64 Score=26.04 Aligned_cols=40 Identities=10% Similarity=0.045 Sum_probs=28.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHH
Q 027111 140 GGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQIL 179 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l 179 (228)
.++....+..+..+.+++.+++..++.+|+|||-.+....
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~ 179 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDF 179 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHH
Confidence 3455666777777777777666666789999998776543
No 59
>PLN02408 phospholipase A1
Probab=39.21 E-value=84 Score=27.58 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHcCCC--eEEEEeC--hHHHHHHHHHHh
Q 027111 146 DVVSRLATAMAAMELEFQGC--AILVVSH--GDPLQILQTLLN 184 (228)
Q Consensus 146 ~~~~R~~~~l~~l~~~~~~~--~vlvVtH--g~~i~~l~~~l~ 184 (228)
.+++.+.+.++++++++++. .|+|++| |+.+..|...-+
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 56778888899998887653 5899999 677776665544
No 60
>PLN00413 triacylglycerol lipase
Probab=38.82 E-value=90 Score=28.43 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEeC--hHHHHHHHHH
Q 027111 147 VVSRLATAMAAMELEFQGCAILVVSH--GDPLQILQTL 182 (228)
Q Consensus 147 ~~~R~~~~l~~l~~~~~~~~vlvVtH--g~~i~~l~~~ 182 (228)
.+..+.+.++++..++++.+|+|.+| |+.+..+...
T Consensus 266 ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34456677888888888889999999 8888877654
No 61
>PLN02324 triacylglycerol lipase
Probab=38.32 E-value=82 Score=28.15 Aligned_cols=37 Identities=11% Similarity=0.253 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHcCC--CeEEEEeC--hHHHHHHHHH
Q 027111 146 DVVSRLATAMAAMELEFQG--CAILVVSH--GDPLQILQTL 182 (228)
Q Consensus 146 ~~~~R~~~~l~~l~~~~~~--~~vlvVtH--g~~i~~l~~~ 182 (228)
.+++.+...++++++++++ ..|+|++| |+++..|...
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 6888899999999998875 36999999 6777776654
No 62
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=37.71 E-value=74 Score=25.90 Aligned_cols=41 Identities=17% Similarity=0.288 Sum_probs=26.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHH
Q 027111 139 EGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQ 180 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~ 180 (228)
|.|.=..+-...+...++++.++ .+.+|++|||...+...+
T Consensus 169 PTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~~lA~~~ 209 (226)
T COG1136 169 PTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDPELAKYA 209 (226)
T ss_pred ccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHhC
Confidence 44433334455666667776654 367999999999887544
No 63
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=36.92 E-value=24 Score=29.40 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=41.7
Q ss_pred EEecCchhHHHHHHHHHHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHH
Q 027111 72 ICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRL 151 (228)
Q Consensus 72 i~sSp~~Ra~qTA~~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~ 151 (228)
++|-|+-...+-|+.+++. |.++ +...-+|..- . ......+.|.+++..++
T Consensus 151 l~T~~yvf~~e~A~~M~~A-GaDi----iv~H~GlT~g-------G-----------------~~Ga~~~~sl~~a~~~~ 201 (268)
T PF09370_consen 151 LFTTAYVFNEEQARAMAEA-GADI----IVAHMGLTTG-------G-----------------SIGAKTALSLEEAAERI 201 (268)
T ss_dssp -EE--EE-SHHHHHHHHHH-T-SE----EEEE-SS----------------------------------S--HHHHHHHH
T ss_pred CeeeeeecCHHHHHHHHHc-CCCE----EEecCCccCC-------C-----------------CcCccccCCHHHHHHHH
Confidence 8888888888888888864 6652 2222222111 1 11123467899999999
Q ss_pred HHHHHHHHHHcCCCeEEEEeChHHHHHH
Q 027111 152 ATAMAAMELEFQGCAILVVSHGDPLQIL 179 (228)
Q Consensus 152 ~~~l~~l~~~~~~~~vlvVtHg~~i~~l 179 (228)
++..+...+ -+.++++.+||+.|..-
T Consensus 202 ~~i~~aa~~--v~~dii~l~hGGPI~~p 227 (268)
T PF09370_consen 202 QEIFDAARA--VNPDIIVLCHGGPIATP 227 (268)
T ss_dssp HHHHHHHHC--C-TT-EEEEECTTB-SH
T ss_pred HHHHHHHHH--hCCCeEEEEeCCCCCCH
Confidence 988887765 45678999999998753
No 64
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=35.73 E-value=89 Score=28.34 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhCCCC
Q 027111 139 EGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLNAVKQ 188 (228)
Q Consensus 139 ~~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~~~~ 188 (228)
-+.|-..+...+.++.++...+.+.++.|+||+|..-...+.+.+.-.+.
T Consensus 156 ~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 156 HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 34566778888888888887777666999999998877666655554443
No 65
>PLN02934 triacylglycerol lipase
Probab=35.68 E-value=1.1e+02 Score=28.18 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEeC--hHHHHHHHHH
Q 027111 145 NDVVSRLATAMAAMELEFQGCAILVVSH--GDPLQILQTL 182 (228)
Q Consensus 145 ~~~~~R~~~~l~~l~~~~~~~~vlvVtH--g~~i~~l~~~ 182 (228)
...+..+...++++.+++++..++|.+| |+.+..+...
T Consensus 301 ~~Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 301 RSAYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred hhHHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4566778899999999998889999999 4677766653
No 66
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=34.81 E-value=1.3e+02 Score=24.29 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=26.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHc-----CCCeEEEEeChHHHHHHHHHH
Q 027111 140 GGESVNDVVSRLATAMAAMELEF-----QGCAILVVSHGDPLQILQTLL 183 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~~-----~~~~vlvVtHg~~i~~l~~~l 183 (228)
.+..+.+..+-+.++++.+.+.+ +.+.|++|+|..---.....+
T Consensus 55 ~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 55 HGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHH
Confidence 34455555555556666665554 567899999976554333333
No 67
>PRK04946 hypothetical protein; Provisional
Probab=33.95 E-value=1.8e+02 Score=22.73 Aligned_cols=48 Identities=21% Similarity=0.140 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeCh---HHHHHHHHHHh-CCCCC
Q 027111 140 GGESVNDVVSRLATAMAAMELEFQGCAILVVSHG---DPLQILQTLLN-AVKQV 189 (228)
Q Consensus 140 ~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg---~~i~~l~~~l~-~~~~~ 189 (228)
.|-+.++....+..|+..... .+...+.|-|| ++++..+..++ ..+..
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~--~g~r~v~IIHGkG~gvLk~~V~~wL~q~~~V 152 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK--EHVFCACVMHGHGKHILKQQTPLWLAQHPDV 152 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH--cCCCEEEEEcCCCHhHHHHHHHHHHcCCchh
Confidence 577899999999999988776 35566788888 78887776666 44433
No 68
>PLN02847 triacylglycerol lipase
Probab=33.90 E-value=1.1e+02 Score=28.68 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEEeC--hHHHHHHHHHHhC
Q 027111 143 SVNDVVSRLATAMAAMELEFQGCAILVVSH--GDPLQILQTLLNA 185 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~~~~~~~vlvVtH--g~~i~~l~~~l~~ 185 (228)
+...+.+.+...+.++...+++-.++|++| |+.+.+++..++.
T Consensus 229 AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 229 AARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHh
Confidence 334555566666677777788889999999 5667777777664
No 69
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=33.82 E-value=68 Score=23.69 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeEEEEeCh--HHHHHHHHHHh
Q 027111 144 VNDVVSRLATAMAAMELEFQGCAILVVSHG--DPLQILQTLLN 184 (228)
Q Consensus 144 ~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg--~~i~~l~~~l~ 184 (228)
+..+...+...+++...+++...|+|++|+ +.+..++...+
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~ 49 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDL 49 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHH
Confidence 345555666666666666678899999995 45555554444
No 70
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=32.31 E-value=72 Score=22.41 Aligned_cols=46 Identities=15% Similarity=0.189 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHHHHHHhcCCC
Q 027111 46 VDQARLAGELFLKELNENNIPLENVRICYSPFSRTTHTAEVVASVLNLP 94 (228)
Q Consensus 46 ~~qa~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~~i~~~~~~~ 94 (228)
+++...+++.|+.++.+++..++ . +.++..+.+--|..++..++.+
T Consensus 7 ~~~~~~~~~~la~~i~~~~~~~~--~-ivgi~~~G~~~a~~la~~l~~~ 52 (125)
T PF00156_consen 7 PEQIEALAERLAEQIKESGFDFD--V-IVGIPRGGIPLAAALARALGIP 52 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSS--E-EEEETTTTHHHHHHHHHHHTHE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC--E-EEeehhccHHHHHHHHHHhCCC
Confidence 35667777777777777788887 4 8889999999999999998875
No 71
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=29.62 E-value=90 Score=26.26 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHH
Q 027111 145 NDVVSRLATAMAAMELEFQGCAILVVSHGDPLQ 177 (228)
Q Consensus 145 ~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~ 177 (228)
.+...++.+.+..+.. .+..|++||||.+--
T Consensus 30 ~~~l~~l~~~i~~l~~--~g~~vilVssGAv~~ 60 (284)
T cd04256 30 LGRLASIVEQVSELQS--QGREVILVTSGAVAF 60 (284)
T ss_pred HHHHHHHHHHHHHHHH--CCCEEEEEeeCcHHh
Confidence 3445555556666654 467899999998764
No 72
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=27.07 E-value=1e+02 Score=27.07 Aligned_cols=44 Identities=9% Similarity=0.150 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhCCC
Q 027111 143 SVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLNAVK 187 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~~~ 187 (228)
...++..+++..++...... ++.|++|+|..---.+...|....
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhcc
Confidence 44577788888888877766 889999999766555555555443
No 73
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=26.58 E-value=81 Score=22.51 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=15.5
Q ss_pred eEEEEeChHHHHHHHHHHh
Q 027111 166 AILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 166 ~vlvVtHg~~i~~l~~~l~ 184 (228)
.++++|||.+-..+...+.
T Consensus 3 ~ili~sHG~~A~gl~~s~~ 21 (116)
T TIGR00824 3 AIIISGHGQAAIALLKSAE 21 (116)
T ss_pred EEEEEecHHHHHHHHHHHH
Confidence 5899999999888875554
No 74
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=26.28 E-value=86 Score=25.68 Aligned_cols=13 Identities=23% Similarity=0.371 Sum_probs=10.1
Q ss_pred CCeEEEEeChHHH
Q 027111 164 GCAILVVSHGDPL 176 (228)
Q Consensus 164 ~~~vlvVtHg~~i 176 (228)
+=+|++|||..-=
T Consensus 198 ~yTIviVTHnmqQ 210 (253)
T COG1117 198 KYTIVIVTHNMQQ 210 (253)
T ss_pred ccEEEEEeCCHHH
Confidence 3489999998754
No 75
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=26.14 E-value=58 Score=23.03 Aligned_cols=19 Identities=26% Similarity=0.342 Sum_probs=14.7
Q ss_pred eEEEEeChHHHHHHHHHHh
Q 027111 166 AILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 166 ~vlvVtHg~~i~~l~~~l~ 184 (228)
.|+++|||.+-..+...+.
T Consensus 1 giii~sHG~~A~g~~~~~~ 19 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLESAE 19 (116)
T ss_dssp EEEEEEETTHHHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHH
Confidence 3799999988887765544
No 76
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=25.51 E-value=80 Score=22.58 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=16.5
Q ss_pred eEEEEeChHHHHHHHHHHhCCC
Q 027111 166 AILVVSHGDPLQILQTLLNAVK 187 (228)
Q Consensus 166 ~vlvVtHg~~i~~l~~~l~~~~ 187 (228)
.++++|||.+-..+...+.-+.
T Consensus 2 ~ili~sHG~~A~gi~~~~~~i~ 23 (122)
T cd00006 2 GIIIATHGGFASGLLNSAEMIL 23 (122)
T ss_pred eEEEEcCHHHHHHHHHHHHHhc
Confidence 4799999988888776555443
No 77
>PF10116 Host_attach: Protein required for attachment to host cells; InterPro: IPR019291 Members of this family of bacterial proteins are required for the attachment of the bacterium to host cells [, ].
Probab=24.68 E-value=2.8e+02 Score=20.20 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHh
Q 027111 143 SVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 143 s~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~ 184 (228)
....|...+...|.+...+..-+.++||+...++..|...|-
T Consensus 70 ~~~~Fa~~vA~~L~~~~~~~~~~~LvlvA~p~~LG~LR~~L~ 111 (138)
T PF10116_consen 70 EEERFAREVADRLEKARRAGKFDRLVLVAPPRFLGLLREHLS 111 (138)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHhC
Confidence 345666666777777666656678999999999998888774
No 78
>COG2893 ManX Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]
Probab=24.05 E-value=86 Score=23.52 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=15.4
Q ss_pred eEEEEeChHHHHHHHHHHh
Q 027111 166 AILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 166 ~vlvVtHg~~i~~l~~~l~ 184 (228)
.++|+|||.+-..+...+.
T Consensus 3 ~iii~tHG~~A~~l~~s~e 21 (143)
T COG2893 3 GIIIATHGRFAEGLLNSLE 21 (143)
T ss_pred eEEEEeCHHHHHHHHHHHH
Confidence 4899999999998875544
No 79
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.02 E-value=2.5e+02 Score=22.34 Aligned_cols=49 Identities=24% Similarity=0.289 Sum_probs=35.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHH-HHHhCCC
Q 027111 138 PEGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQ-TLLNAVK 187 (228)
Q Consensus 138 ~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~-~~l~~~~ 187 (228)
.|.|--...++.|....++.+.... +-.++||||.-.+.-++ ..++-+.
T Consensus 177 EPTGGLDVSVQARLLDllrgLv~~l-~la~viVTHDl~VarLla~rlmvmk 226 (258)
T COG4107 177 EPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVARLLADRLMVMK 226 (258)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhc-CceEEEEechhHHHHHhhhcceeec
Confidence 3555556789999999999998764 45789999998776544 4444333
No 80
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=23.97 E-value=3.9e+02 Score=21.56 Aligned_cols=49 Identities=16% Similarity=0.045 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhCCCCC
Q 027111 141 GESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLNAVKQV 189 (228)
Q Consensus 141 ~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~~~~~ 189 (228)
.++..........+++.+......++|-|++|..-.+.++..+..+...
T Consensus 69 ~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~ 117 (233)
T PF05990_consen 69 RESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASE 117 (233)
T ss_pred hhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhc
Confidence 3455566667777777777665578999999999888888777654443
No 81
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=23.47 E-value=96 Score=25.47 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=24.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHH
Q 027111 141 GESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQ 177 (228)
Q Consensus 141 ~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~ 177 (228)
-.|+.+...|+.+.++. ..++++.|+|+|+++..
T Consensus 126 i~s~~eA~~~ive~~~~---~~~~~~~VliaH~~~~G 159 (238)
T cd07397 126 VISLEESAQRIIAAAKK---APPDLPLILLAHNGPSG 159 (238)
T ss_pred CCCHHHHHHHHHHHhhh---cCCCCCeEEEeCcCCcC
Confidence 45777777777777742 12456789999999754
No 82
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=23.36 E-value=2.9e+02 Score=25.10 Aligned_cols=45 Identities=7% Similarity=0.033 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHhC
Q 027111 141 GESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLNA 185 (228)
Q Consensus 141 ~Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~~ 185 (228)
.|.+++-..|+..++........++++++++-......+...|..
T Consensus 291 pe~l~~Er~rl~dal~d~~~~L~GKrvai~Gdp~~~i~LarfL~e 335 (457)
T CHL00073 291 PQGLEEREEQIWESLKDYLDLVRGKSVFFMGDNLLEISLARFLIR 335 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHH
Confidence 355677777888888887777789999988886777777766664
No 83
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=23.28 E-value=1.3e+02 Score=25.32 Aligned_cols=27 Identities=22% Similarity=0.374 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEeChHH
Q 027111 148 VSRLATAMAAMELEFQGCAILVVSHGDP 175 (228)
Q Consensus 148 ~~R~~~~l~~l~~~~~~~~vlvVtHg~~ 175 (228)
....+..++++.... +++|++|||..-
T Consensus 171 R~~lQ~e~~~lq~~l-~kTivfVTHDid 197 (309)
T COG1125 171 RKQLQEEIKELQKEL-GKTIVFVTHDID 197 (309)
T ss_pred HHHHHHHHHHHHHHh-CCEEEEEecCHH
Confidence 344555666666553 689999999853
No 84
>PRK14476 nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional
Probab=22.82 E-value=3.7e+02 Score=24.27 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=51.0
Q ss_pred EEecCchhHHHHHHHHHHhcCCCCCCCcceecCCcccccCCcccCCCcCCCChHHHhcccCCCCCCCCCCCCHHHHHHHH
Q 027111 72 ICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSHDKYPEIWALDEKDPFMRPEGGESVNDVVSRL 151 (228)
Q Consensus 72 i~sSp~~Ra~qTA~~i~~~~~~~~~~~~i~~~~~L~E~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Es~~~~~~R~ 151 (228)
|..++. ...+|+.+.+.++.+. ...+. .+|. ..-..+=....++... +-.+.+..-..|+
T Consensus 239 iv~~~~--~~~~a~~Lee~~GiP~-----~~~~~----p~G~----~~t~~~l~~l~~~~g~-----~~~~~i~~er~~~ 298 (455)
T PRK14476 239 IAIGES--MRKAAEALEARTGVPY-----LVFPS----LTGL----EAVDRFIATLAQISGR-----PVPAKYRRQRAQL 298 (455)
T ss_pred EEecHH--HHHHHHHHHHHhCCCe-----EecCC----CcCh----HHHHHHHHHHHHHHCC-----CCcHHHHHHHHHH
Confidence 445765 4588999999999873 22111 1221 1001111111112111 1123455556667
Q ss_pred HHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHh
Q 027111 152 ATAMAAMELEFQGCAILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 152 ~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~ 184 (228)
.+.+.+......+++++|++.+.....+...|.
T Consensus 299 ~~~~~d~~~~l~gkrvai~~~~~~~~~la~~L~ 331 (455)
T PRK14476 299 QDAMLDGHFYFGGKRVAIAAEPDLLLALGSFLA 331 (455)
T ss_pred HHHHHHHHHHhcCCEEEEEeCHHHHHHHHHHHH
Confidence 777766655556889999998877777766665
No 85
>PLN02753 triacylglycerol lipase
Probab=22.58 E-value=2.2e+02 Score=26.35 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHcC-----CCeEEEEeC--hHHHHHHHHH
Q 027111 146 DVVSRLATAMAAMELEFQ-----GCAILVVSH--GDPLQILQTL 182 (228)
Q Consensus 146 ~~~~R~~~~l~~l~~~~~-----~~~vlvVtH--g~~i~~l~~~ 182 (228)
.+.+.+...+++++++++ +..|.|++| |+++..|...
T Consensus 288 S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 288 SAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred hHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 567788888999888774 358999999 6677666553
No 86
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=21.36 E-value=55 Score=27.29 Aligned_cols=45 Identities=22% Similarity=0.329 Sum_probs=21.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHH-HcCCCeEEEEeChHHHH
Q 027111 133 DPFMRPEGGESVNDVVSRLATAMAAMEL-EFQGCAILVVSHGDPLQ 177 (228)
Q Consensus 133 ~~~~~~~~~Es~~~~~~R~~~~l~~l~~-~~~~~~vlvVtHg~~i~ 177 (228)
.|....++.++..+-+.++.+++..... ...++.+|+++||..-.
T Consensus 109 ~PLL~~~g~~~~~~D~~~va~aL~~~~~~~~~~~a~vlmGHGt~h~ 154 (262)
T PF06180_consen 109 RPLLYTMGQENSPEDYEAVAEALAEEFPKKRKDEAVVLMGHGTPHP 154 (262)
T ss_dssp --SCSS-----SHHHHHHHHHHHHCCS-TT-TTEEEEEEE---SCH
T ss_pred ccccccccccCChHHHHHHHHHHHHhccccCCCCEEEEEeCCCCCC
Confidence 3444434445556666777777766443 23567899999997543
No 87
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=21.00 E-value=1.8e+02 Score=22.29 Aligned_cols=27 Identities=7% Similarity=0.258 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEeChH
Q 027111 146 DVVSRLATAMAAMELEFQGCAILVVSHGD 174 (228)
Q Consensus 146 ~~~~R~~~~l~~l~~~~~~~~vlvVtHg~ 174 (228)
....++.+.++++.. .+.+|+++||..
T Consensus 161 ~~~~~~~~~l~~~~~--~~~tili~sH~~ 187 (190)
T TIGR01166 161 AGREQMLAILRRLRA--EGMTVVISTHDV 187 (190)
T ss_pred HHHHHHHHHHHHHHH--cCCEEEEEeecc
Confidence 445566677777654 367999999964
No 88
>KOG4238 consensus Bifunctional ATP sulfurylase/adenosine 5'-phosphosulfate kinase [Nucleotide transport and metabolism]
Probab=20.94 E-value=1.8e+02 Score=25.78 Aligned_cols=82 Identities=18% Similarity=0.283 Sum_probs=46.6
Q ss_pred EEEeCCCCCccccc--ceecccCCCCCCCCCCCHhHHHHH----HHHHHHHHHHhhhCCCCCCccEEEecCchhHHHHHH
Q 027111 12 WVLRHGKSIPNEKG--LIVSSLENGTRREYQLASEGVDQA----RLAGELFLKELNENNIPLENVRICYSPFSRTTHTAE 85 (228)
Q Consensus 12 ~lvRHge~~~n~~~--~~~g~~~~~~~~d~~Lt~~G~~qa----~~~~~~l~~~~~~~~~~~~~~~i~sSp~~Ra~qTA~ 85 (228)
||+.||-.-+..++ .-.|.. .+...+++.+++- .+.+..++ ++++..- .-|-||+..-..-|.
T Consensus 73 ~l~~~gipcy~ldgdnirhgl~-----knlgfs~edreenirriaevaklfa----daglvci--tsfispf~~dr~~ar 141 (627)
T KOG4238|consen 73 YLVSHGIPCYSLDGDNIRHGLN-----KNLGFSPEDREENIRRIAEVAKLFA----DAGLVCI--TSFISPFAKDRENAR 141 (627)
T ss_pred HHHhcCCcccccCcchhhhhhh-----hccCCCchhHHHHHHHHHHHHHHHh----cCCceee--ehhcChhhhhhhhhh
Confidence 56777776554432 222221 2455566555432 33344444 3354433 567799999999999
Q ss_pred HHHHhcCCCCCCCcceecCCc
Q 027111 86 VVASVLNLPFEGPQCKVMEDL 106 (228)
Q Consensus 86 ~i~~~~~~~~~~~~i~~~~~L 106 (228)
.|-+..+.++ +++.++.-|
T Consensus 142 kihe~~~l~f--~ev~v~a~l 160 (627)
T KOG4238|consen 142 KIHESAGLPF--FEVFVDAPL 160 (627)
T ss_pred hhhcccCCce--EEEEecCch
Confidence 9988776653 234444433
No 89
>PF13422 DUF4110: Domain of unknown function (DUF4110)
Probab=20.75 E-value=2e+02 Score=19.97 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=20.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHH
Q 027111 137 RPEGGESVNDVVSRLATAMAAMELE 161 (228)
Q Consensus 137 ~~~~~Es~~~~~~R~~~~l~~l~~~ 161 (228)
.|..+||+.+|+.|...+|......
T Consensus 11 tP~p~EsLr~Ff~RT~~~W~~~a~~ 35 (96)
T PF13422_consen 11 TPKPFESLRDFFARTSEYWQEWAIE 35 (96)
T ss_pred CCCCCCcHHHHHHHhHHHHHHHHHH
Confidence 3456899999999999999886654
No 90
>cd01966 Nitrogenase_NifN_1 Nitrogenase_nifN1: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=20.58 E-value=5.1e+02 Score=23.02 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCeEEEEeChHHHHHHHHHHh
Q 027111 142 ESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQTLLN 184 (228)
Q Consensus 142 Es~~~~~~R~~~~l~~l~~~~~~~~vlvVtHg~~i~~l~~~l~ 184 (228)
|.+.+-..|+.+.+.+......+++++|++++.....+...|.
T Consensus 278 ~~i~~er~~~~~~~~d~~~~l~gkrvai~~~~~~~~~l~~~L~ 320 (417)
T cd01966 278 EKIRRQRAQLQDAMLDGHFYLGGKRVAIALEPDLLAALSSFLA 320 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEEEeCHHHHHHHHHHHH
Confidence 4455556677777766665567899999999987777766665
No 91
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=20.56 E-value=1.6e+02 Score=27.02 Aligned_cols=49 Identities=20% Similarity=0.165 Sum_probs=33.2
Q ss_pred CCCC-CCCCCCCCHHHHHHHHHHH--HHHHHHHcCCCeEEEEeChHHHHHHHHH
Q 027111 132 KDPF-MRPEGGESVNDVVSRLATA--MAAMELEFQGCAILVVSHGDPLQILQTL 182 (228)
Q Consensus 132 ~~~~-~~~~~~Es~~~~~~R~~~~--l~~l~~~~~~~~vlvVtHg~~i~~l~~~ 182 (228)
++.. +.+-...||-|+.+|+..+ ++++.+ .++.|+||-|.-++--++.-
T Consensus 230 rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~--~~k~ViVVEHDLavLD~lsD 281 (591)
T COG1245 230 RDADVYFFDEPSSYLDIRQRLNAARVIRELAE--DGKYVIVVEHDLAVLDYLSD 281 (591)
T ss_pred ccCCEEEEcCCcccccHHHHHHHHHHHHHHhc--cCCeEEEEechHHHHHHhhh
Confidence 3444 3345567999999998653 455554 36889999999887655543
Done!