Query 027114
Match_columns 228
No_of_seqs 70 out of 72
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 08:02:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027114.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027114hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3etja2 c.30.1.1 (A:1-78) N5-c 8.7 64 0.0046 21.5 1.5 10 46-55 11-20 (78)
2 d1npya1 c.2.1.7 (A:103-269) Sh 7.8 1.3E+02 0.0094 21.5 3.1 47 80-130 1-52 (167)
3 d1xtpa_ c.66.1.42 (A:) Hypothe 7.4 1.9E+02 0.014 21.8 4.1 58 77-140 75-133 (254)
4 d1dxja_ d.2.1.1 (A:) Plant cla 7.4 1.6E+02 0.012 23.2 3.7 40 128-169 114-165 (242)
5 d1jqea_ c.66.1.19 (A:) Histami 6.2 1.4E+02 0.01 22.4 2.7 45 97-141 39-88 (280)
6 d2o23a1 c.2.1.2 (A:6-253) Type 6.2 1.1E+02 0.0083 22.7 2.0 37 94-130 1-40 (248)
7 d1kjqa2 c.30.1.1 (A:2-112) Gly 5.9 1E+02 0.0076 21.2 1.5 11 45-55 20-30 (111)
8 d2fk8a1 c.66.1.18 (A:22-301) M 5.8 1E+02 0.0073 24.3 1.5 24 95-118 49-72 (280)
9 d1kpia_ c.66.1.18 (A:) CmaA2 { 5.6 1E+02 0.0076 24.5 1.5 18 95-112 58-75 (291)
10 d1kpga_ c.66.1.18 (A:) CmaA1 { 5.5 1E+02 0.0074 24.5 1.4 24 95-118 59-83 (285)
No 1
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}
Probab=8.75 E-value=64 Score=21.49 Aligned_cols=10 Identities=20% Similarity=0.179 Sum_probs=9.0
Q ss_pred HHHHHHHHhh
Q 027114 46 ALVKLVCLAT 55 (228)
Q Consensus 46 Ql~Kml~LAT 55 (228)
||.||+.+|-
T Consensus 11 QLgrMl~~Aa 20 (78)
T d3etja2 11 QLGRMLRQAG 20 (78)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 2
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Probab=7.83 E-value=1.3e+02 Score=21.52 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhccccCCCCCceeEeeehhhhhHHHHHhhh----h-hhhhccCCcc
Q 027114 80 DVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRL----A-PLWVGARGLE 130 (228)
Q Consensus 80 Dl~Gly~vL~~~~~~~~~~~~ril~~GlGWa~ae~v~trl----~-plwvgaRg~e 130 (228)
|.+|+.-.|.+.. ++.+.|++.+|-| +.|.++..-+ . .+.+-.|..|
T Consensus 1 D~~G~~~~l~~~~---~~~~~~vlIlGaG-Gaarai~~aL~~~g~~~I~I~nR~~~ 52 (167)
T d1npya1 1 DYIAIVKLIEKYH---LNKNAKVIVHGSG-GMAKAVVAAFKNSGFEKLKIYARNVK 52 (167)
T ss_dssp HHHHHHHHHHHTT---CCTTSCEEEECSS-TTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred ChHHHHHHHHHcC---CCCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEecccHH
Confidence 8899988887632 2346788888866 3444444333 2 3455556544
No 3
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=7.41 E-value=1.9e+02 Score=21.85 Aligned_cols=58 Identities=17% Similarity=0.156 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhhccccCCCCCceeEeeehhhh-hHHHHHhhhhhhhhccCCccchHHHHHHHH
Q 027114 77 GFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWA-FADSVLHRLAPLWVGARGLEFTWDYLLQGL 140 (228)
Q Consensus 77 ~~iDl~Gly~vL~~~~~~~~~~~~ril~~GlGWa-~ae~v~trl~plwvgaRg~eF~Wkyi~~sl 140 (228)
.-+|+-+..-.|...+. ++..|++.+|=|++ .+..++.+..- .--++|.+=+.+..+-
T Consensus 75 ~~~d~~~s~~fl~~l~~---~~~~~vLD~GcG~G~~t~~ll~~~~~---~v~~vD~s~~~l~~a~ 133 (254)
T d1xtpa_ 75 HDVDIEGSRNFIASLPG---HGTSRALDCGAGIGRITKNLLTKLYA---TTDLLEPVKHMLEEAK 133 (254)
T ss_dssp HHHHHHHHHHHHHTSTT---CCCSEEEEETCTTTHHHHHTHHHHCS---EEEEEESCHHHHHHHH
T ss_pred chhhHHHHHHHHhhCCC---CCCCeEEEecccCChhhHHHHhhcCc---eEEEEcCCHHHHHhhh
Confidence 34688888888887654 35679999999998 44444544321 2245677766665553
No 4
>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]}
Probab=7.38 E-value=1.6e+02 Score=23.23 Aligned_cols=40 Identities=25% Similarity=0.374 Sum_probs=28.9
Q ss_pred CccchHHHHHHHHh--------hhHHHHHH---HH-HHHHHHHHHHhcCCCCcc
Q 027114 128 GLEFTWDYLLQGLE--------ANANLVLS---IS-LAALGSLMWLRKNKPKTL 169 (228)
Q Consensus 128 g~eF~Wkyi~~sle--------sNi~Lv~~---is-~a~L~~~mw~R~~~~~~~ 169 (228)
.+..+|+|=+.... .|=++|.. ++ .++ +|-|+++..|+..
T Consensus 114 ~iQLTg~~NY~~~~~~lg~dl~~nP~lva~d~~~a~~sA--~wfW~~~~~~~~s 165 (242)
T d1dxja_ 114 PIQLTHNYNYAQAGRALGVDLINNPDLVARDAVISFKTA--IWFWMTPQGNKPS 165 (242)
T ss_dssp TTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHH--HHHHHCCBTTBCC
T ss_pred ccccchhHHHHHHHHHhCCCcccChHHhhcChHHHHHHH--HHHHhcCCCCCcc
Confidence 48999999888765 47777775 44 445 5999988777643
No 5
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.24 E-value=1.4e+02 Score=22.42 Aligned_cols=45 Identities=16% Similarity=0.148 Sum_probs=29.0
Q ss_pred CCCceeEeeehhhhhH-HHHHhhhhhhhhc----cCCccchHHHHHHHHh
Q 027114 97 SQNHKFQAVGLGWAFA-DSVLHRLAPLWVG----ARGLEFTWDYLLQGLE 141 (228)
Q Consensus 97 ~~~~ril~~GlGWa~a-e~v~trl~plwvg----aRg~eF~Wkyi~~sle 141 (228)
+.+.||+.+|=|.+.. ..++..+.+-..+ ..|+|.+-+.+..+-+
T Consensus 39 ~~~~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~ 88 (280)
T d1jqea_ 39 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKE 88 (280)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHH
Confidence 5677999999998753 2334444333322 3578888887776654
No 6
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.23 E-value=1.1e+02 Score=22.67 Aligned_cols=37 Identities=19% Similarity=0.077 Sum_probs=27.0
Q ss_pred cCCCCCceeEee---ehhhhhHHHHHhhhhhhhhccCCcc
Q 027114 94 RNISQNHKFQAV---GLGWAFADSVLHRLAPLWVGARGLE 130 (228)
Q Consensus 94 ~~~~~~~ril~~---GlGWa~ae~v~trl~plwvgaRg~e 130 (228)
|+.||+.=+++. |||-++|+-+..+..-+....|..|
T Consensus 1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~ 40 (248)
T d2o23a1 1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS 40 (248)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 345665555544 3999999999999888887777643
No 7
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=5.88 E-value=1e+02 Score=21.15 Aligned_cols=11 Identities=27% Similarity=0.190 Sum_probs=9.3
Q ss_pred HHHHHHHHHhh
Q 027114 45 TALVKLVCLAT 55 (228)
Q Consensus 45 TQl~Kml~LAT 55 (228)
-||.||+.+|-
T Consensus 20 GQL~rMla~aA 30 (111)
T d1kjqa2 20 GELGKEVAIEC 30 (111)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 39999999984
No 8
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.77 E-value=1e+02 Score=24.30 Aligned_cols=24 Identities=13% Similarity=0.336 Sum_probs=16.9
Q ss_pred CCCCCceeEeeehhhhhHHHHHhh
Q 027114 95 NISQNHKFQAVGLGWAFADSVLHR 118 (228)
Q Consensus 95 ~~~~~~ril~~GlGWa~ae~v~tr 118 (228)
+++...||+.+|=||+..-.-+.+
T Consensus 49 ~l~~g~~VLDiGCG~G~~a~~~a~ 72 (280)
T d2fk8a1 49 DLKPGMTLLDIGCGWGTTMRRAVE 72 (280)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHH
T ss_pred CCCCCCEEEEecCCchHHHHHHHH
Confidence 446778999999999954333333
No 9
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.59 E-value=1e+02 Score=24.53 Aligned_cols=18 Identities=22% Similarity=0.615 Sum_probs=14.6
Q ss_pred CCCCCceeEeeehhhhhH
Q 027114 95 NISQNHKFQAVGLGWAFA 112 (228)
Q Consensus 95 ~~~~~~ril~~GlGWa~a 112 (228)
+++...|||.+|=||+..
T Consensus 58 ~l~~G~~VLDiGCG~G~~ 75 (291)
T d1kpia_ 58 NLEPGMTLLDIGCGWGST 75 (291)
T ss_dssp CCCTTCEEEEETCTTSHH
T ss_pred CCCCCCEEEEecCcchHH
Confidence 346678999999999954
No 10
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.53 E-value=1e+02 Score=24.51 Aligned_cols=24 Identities=17% Similarity=0.433 Sum_probs=16.8
Q ss_pred CCCCCceeEeeehhhhh-HHHHHhh
Q 027114 95 NISQNHKFQAVGLGWAF-ADSVLHR 118 (228)
Q Consensus 95 ~~~~~~ril~~GlGWa~-ae~v~tr 118 (228)
++++..||+++|=||+. |.-+..+
T Consensus 59 ~l~~G~~VLDiGCG~G~~a~~~a~~ 83 (285)
T d1kpga_ 59 GLQPGMTLLDVGCGWGATMMRAVEK 83 (285)
T ss_dssp TCCTTCEEEEETCTTSHHHHHHHHH
T ss_pred CCCCCCEEEEecCcchHHHHHHHhc
Confidence 34667899999999995 3333433
Done!