Query 027120
Match_columns 228
No_of_seqs 155 out of 410
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 08:12:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027120.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027120hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fzya_ d.20.1.1 (A:) Ubiquiti 47.0 22 0.0016 25.8 6.3 36 61-96 28-63 (149)
2 d2e2ca_ d.20.1.1 (A:) Ubiquiti 43.3 25 0.0018 26.1 6.1 47 61-107 35-83 (156)
3 d2uyza1 d.20.1.1 (A:3-158) Ubi 42.7 27 0.002 25.7 6.3 49 48-96 20-68 (156)
4 d1jatb_ d.20.1.1 (B:) Ubiquiti 42.5 33 0.0024 25.0 6.6 37 60-96 33-69 (136)
5 d2awfa1 d.20.1.1 (A:7-131) Ubi 38.4 39 0.0028 23.8 6.3 36 61-96 26-61 (125)
6 d2a4da1 d.20.1.1 (A:82-220) Ub 36.7 62 0.0045 23.3 7.4 37 60-96 34-70 (139)
7 d1pzva_ d.20.1.1 (A:) Ubiquiti 34.6 35 0.0025 25.0 5.7 35 61-95 27-61 (161)
8 d1yrva1 d.20.1.1 (A:1-148) Ubi 34.2 42 0.0031 24.5 6.1 35 62-96 31-65 (148)
9 d2ucza_ d.20.1.1 (A:) Ubiquiti 31.8 52 0.0038 24.0 6.3 36 61-96 30-65 (164)
10 d2bepa1 d.20.1.1 (A:1-154) Ubi 31.3 54 0.0039 23.8 6.3 36 61-96 33-68 (154)
11 d1zdna1 d.20.1.1 (A:6-156) Ubi 31.1 52 0.0038 23.9 6.2 35 62-96 33-67 (151)
12 d2f4za1 d.20.1.1 (A:32-192) Hy 30.1 50 0.0036 24.4 6.0 35 62-96 41-75 (161)
13 d1ayza_ d.20.1.1 (A:) Ubiquiti 29.8 53 0.0039 23.5 6.0 45 62-106 30-76 (153)
14 d2fo3a1 d.20.1.1 (A:9-117) Put 28.8 70 0.0051 21.9 6.2 36 61-96 24-59 (109)
15 d1e43a1 b.71.1.1 (A:394-483) B 27.0 7 0.00051 27.7 0.3 14 105-118 66-79 (90)
16 d1i7ka_ d.20.1.1 (A:) Ubiquiti 25.8 67 0.0049 23.1 5.9 44 61-104 27-72 (146)
17 d1j7db_ d.20.1.1 (B:) Ubiquiti 25.6 77 0.0056 22.7 6.2 35 62-96 29-63 (149)
18 d1z3da1 d.20.1.1 (A:2-150) Ubi 25.6 70 0.0051 22.9 6.0 35 62-96 30-64 (149)
19 d2d3na1 b.71.1.1 (A:399-485) B 25.0 8 0.00058 27.3 0.3 13 106-118 64-76 (87)
20 d1yh2a1 d.20.1.1 (A:1-154) Ubi 24.8 78 0.0057 22.6 6.1 35 62-96 29-63 (154)
21 d1yf9a1 d.20.1.1 (A:13-170) Ub 24.2 67 0.0049 23.6 5.7 35 62-96 23-57 (158)
22 d1ud2a1 b.71.1.1 (A:391-480) B 22.9 9.3 0.00068 27.1 0.3 13 106-118 67-79 (90)
23 d1z2ua1 d.20.1.1 (A:1-147) Ubi 22.7 87 0.0064 22.1 6.0 35 62-96 28-62 (147)
24 d1jata_ d.20.1.1 (A:) Ubiquiti 21.9 92 0.0067 22.4 6.0 36 61-96 29-64 (152)
25 d2z5da1 d.20.1.1 (A:23-174) Ub 21.7 64 0.0047 23.3 5.1 35 62-96 26-60 (152)
No 1
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=47.01 E-value=22 Score=25.85 Aligned_cols=36 Identities=14% Similarity=-0.020 Sum_probs=28.9
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++..++|.+-+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 28 ~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~ 63 (149)
T d1fzya_ 28 ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 63 (149)
T ss_dssp SSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhEEEEEEEcCCCCCCCCCceeEEEEecCCccc
Confidence 457889999999987765555666899999999984
No 2
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=43.31 E-value=25 Score=26.06 Aligned_cols=47 Identities=9% Similarity=0.309 Sum_probs=34.0
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCC--CCceeeecCCcE
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFN--NPTRVVESPPFE 107 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~--nP~Rvv~~PPFe 107 (228)
+.+.+.|.+-+.|+.+..-..-+=++.+.+-+.|+ .|...+..+.|.
T Consensus 35 ~~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 83 (156)
T d2e2ca_ 35 GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CCcccEEEEEEEcCCccccCCCEEEEEEEecCCCCCCCceeeccccCcC
Confidence 35789999999998776665556688899999887 355555555444
No 3
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=42.70 E-value=27 Score=25.72 Aligned_cols=49 Identities=8% Similarity=0.181 Sum_probs=33.9
Q ss_pred EccceEEcCCCCCCCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 48 YGTMAFHLGRKASESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 48 ~Gn~A~~l~k~~~e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
.|-.|.......+..+..+|.+-+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 20 ~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP~ 68 (156)
T d2uyza1 20 FGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPS 68 (156)
T ss_dssp TTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCccccC
Confidence 4666655544444568899999999987654443344788888898873
No 4
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=42.46 E-value=33 Score=25.00 Aligned_cols=37 Identities=11% Similarity=0.295 Sum_probs=28.7
Q ss_pred CCCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 60 SESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 60 ~e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++...++|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 33 dd~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 69 (136)
T d1jatb_ 33 DDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPD 69 (136)
T ss_dssp TCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTT
T ss_pred CCCceeEEEEEEECCCCChhhcCEEEEEEEecCCCCC
Confidence 3457999999999987765544555888999999974
No 5
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=38.44 E-value=39 Score=23.79 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=28.3
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
+.+..+|.+-++|+.+..-..-+=++.|.+.+.|+.
T Consensus 26 ~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~ 61 (125)
T d2awfa1 26 DNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPL 61 (125)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcCC
Confidence 346788999999987766555677788888998874
No 6
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=36.75 E-value=62 Score=23.32 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=28.0
Q ss_pred CCCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 60 SESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 60 ~e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
.+.+..+|.+.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 34 ~d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~ 70 (139)
T d2a4da1 34 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 70 (139)
T ss_dssp TCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CcccccEEEEEEECCCCCchhcCEEEEEEECCCCCCC
Confidence 3457888999999997766555566677888888874
No 7
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=34.61 E-value=35 Score=25.04 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=27.5
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFN 95 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~ 95 (228)
+...+.|.+-+.|+.+..-..-+=++.+.+.+.|+
T Consensus 27 ~~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP 61 (161)
T d1pzva_ 27 DNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 61 (161)
T ss_dssp TTCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGG
T ss_pred CCCceEEEEEEECCcchhhcCCEEEEEEeCCCCCC
Confidence 34678999999998776655567788888888887
No 8
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=34.16 E-value=42 Score=24.47 Aligned_cols=35 Identities=14% Similarity=0.329 Sum_probs=27.3
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++.+.|.+-+.|+.+.....-+=++.+.+.++|+.
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 65 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNY 65 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTT
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEecccccc
Confidence 47889999999987665544455888888899874
No 9
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=31.76 E-value=52 Score=24.00 Aligned_cols=36 Identities=8% Similarity=0.241 Sum_probs=27.0
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
+++...|.+-+.|+.+..-..=+=++.+.+.+.|+-
T Consensus 30 e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP~ 65 (164)
T d2ucza_ 30 ENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPL 65 (164)
T ss_dssp SSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred ccchhhhheeeeCCCcccccCCeeEEEEecCCCCCC
Confidence 446789999999987765544455788888898873
No 10
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.28 E-value=54 Score=23.75 Aligned_cols=36 Identities=3% Similarity=0.003 Sum_probs=27.5
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
+++...|.+-+.|+.+.....=+=++.+.+.+.|+.
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 68 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCChhheEeeEecCccccccCCeeEEEEeccccccC
Confidence 346779999999987665544455899999999873
No 11
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=31.09 E-value=52 Score=23.92 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=26.8
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++..+|.+.+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 67 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPA 67 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCCC
Confidence 46788999999987655555566788888888873
No 12
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=30.13 E-value=50 Score=24.39 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=27.2
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++..+|.+.+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 41 ~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~ 75 (161)
T d2f4za1 41 GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 75 (161)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CccceeEEEEeCCCCCccCCCEEEEEEeccCCCCC
Confidence 47889999999987765544444888888999974
No 13
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=29.81 E-value=53 Score=23.51 Aligned_cols=45 Identities=13% Similarity=0.254 Sum_probs=31.7
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCC--CCceeeecCCc
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFN--NPTRVVESPPF 106 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~--nP~Rvv~~PPF 106 (228)
++...|.+.+.|+.+..-..-+=++.+.+.++|+ .|...+..+.|
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 76 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMF 76 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCccccCCCCeeeeccCCC
Confidence 4789999999998776554445588889999986 35544444433
No 14
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=28.83 E-value=70 Score=21.91 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=25.7
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
+++.++|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 24 ~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 59 (109)
T d2fo3a1 24 PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPL 59 (109)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCcccEEEEEEecCchhhhcCCCceEEEEeccccCC
Confidence 346789999999987655444455677777777764
No 15
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=27.03 E-value=7 Score=27.74 Aligned_cols=14 Identities=43% Similarity=1.142 Sum_probs=11.6
Q ss_pred CcEEEEeeEeeEEe
Q 027120 105 PFELQECGWGEFEI 118 (228)
Q Consensus 105 PFeVtE~GWGEF~I 118 (228)
+=.|.|.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 44677999999987
No 16
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=25.79 E-value=67 Score=23.13 Aligned_cols=44 Identities=14% Similarity=0.297 Sum_probs=30.5
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC--CceeeecC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN--PTRVVESP 104 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n--P~Rvv~~P 104 (228)
+++.++|.+-+.|+.+..-..-+=++.+.+.++|+. |...+..+
T Consensus 27 ~~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 72 (146)
T d1i7ka_ 27 SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTP 72 (146)
T ss_dssp TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCcccEEEEEEecCccccccCCEEEEEEEecCCCCcCCceeeecCC
Confidence 357999999999987655444455888888888873 44444444
No 17
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=25.64 E-value=77 Score=22.70 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=26.6
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++...|.+-+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 29 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 63 (149)
T d1j7db_ 29 SNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPM 63 (149)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CcccEeeeEEECCcccccCCCEEEEEEecCCcccC
Confidence 46778999999987655444444888889998873
No 18
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=25.57 E-value=70 Score=22.91 Aligned_cols=35 Identities=9% Similarity=0.234 Sum_probs=28.0
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++...|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~ 64 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 64 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCCC
Confidence 46889999999987766555566899999999974
No 19
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=24.99 E-value=8 Score=27.27 Aligned_cols=13 Identities=31% Similarity=0.997 Sum_probs=10.8
Q ss_pred cEEEEeeEeeEEe
Q 027120 106 FELQECGWGEFEI 118 (228)
Q Consensus 106 FeVtE~GWGEF~I 118 (228)
=.|.|.|||+|.+
T Consensus 64 V~id~~G~g~F~v 76 (87)
T d2d3na1 64 VTINADGWGNFSV 76 (87)
T ss_dssp EECCTTSEEEEEE
T ss_pred EEECCCceEEEEE
Confidence 3567999999987
No 20
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=24.80 E-value=78 Score=22.60 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=28.0
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++...|.+.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP~ 63 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPF 63 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCccccC
Confidence 46789999999988766655677788888888873
No 21
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=24.17 E-value=67 Score=23.58 Aligned_cols=35 Identities=11% Similarity=0.032 Sum_probs=28.1
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
+...+|.|-++|+.+..-..=+=++.+.+-+.|+.
T Consensus 23 d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 57 (158)
T d1yf9a1 23 DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPF 57 (158)
T ss_dssp SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCceEEEEEEECCCCCCccCcEEEEEEECcccchh
Confidence 47889999999998766555555799999999984
No 22
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=22.90 E-value=9.3 Score=27.07 Aligned_cols=13 Identities=38% Similarity=0.846 Sum_probs=10.7
Q ss_pred cEEEEeeEeeEEe
Q 027120 106 FELQECGWGEFEI 118 (228)
Q Consensus 106 FeVtE~GWGEF~I 118 (228)
=.|.|.|||+|.+
T Consensus 67 V~id~~G~g~F~V 79 (90)
T d1ud2a1 67 VTINGDGWGEFFT 79 (90)
T ss_dssp EECCTTSEEEEEE
T ss_pred EEECCCceEEEEE
Confidence 3466999999987
No 23
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=22.70 E-value=87 Score=22.08 Aligned_cols=35 Identities=6% Similarity=0.153 Sum_probs=27.5
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++...|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 28 ~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 62 (147)
T d1z2ua1 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62 (147)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CchhhhhheecCCCCCCcCCCceEEEEecCcCCCC
Confidence 46789999999987766655566888888888873
No 24
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Probab=21.90 E-value=92 Score=22.44 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=28.4
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 61 e~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
+++...|.+-+.|+.+.....=+=++.+.+-+.|+.
T Consensus 29 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 64 (152)
T d1jata_ 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPM 64 (152)
T ss_dssp TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTT
T ss_pred CCccchhheeeeCCchhhhcCCEEEEEEecCccCCC
Confidence 357899999999987766555566788889998873
No 25
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=21.75 E-value=64 Score=23.32 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=26.5
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 027120 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (228)
Q Consensus 62 ~~tH~WtVyVR~~~~edls~fIkKV~F~LHpSF~n 96 (228)
++.++|.|-+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 26 ~~l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 60 (152)
T d2z5da1 26 GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 60 (152)
T ss_dssp EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CChheEEEEEEcCCCCCcCCCEEEEEEEecCCCCC
Confidence 36678999999987655544455788888889974
Done!