Your job contains 1 sequence.
>027121
MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL
LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF
REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI
LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027121
(228 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 595 6.6e-58 1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 450 1.5e-42 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 440 1.7e-41 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 421 1.8e-39 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 416 6.1e-39 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 296 3.2e-26 1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 290 1.4e-25 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 215 1.0e-23 2
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 232 3.4e-23 2
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 202 2.9e-16 1
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 144 7.3e-10 1
TAIR|locus:2057786 - symbol:3BETAHSD/D2 "3beta-hydroxyste... 133 1.4e-06 1
TAIR|locus:2058223 - symbol:AT2G43420 species:3702 "Arabi... 125 1.6e-05 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 119 2.0e-05 1
UNIPROTKB|K7EMR7 - symbol:RTN2 "Reticulon-2" species:9606... 118 3.2e-05 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 115 3.4e-05 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 115 6.6e-05 1
UNIPROTKB|O75298 - symbol:RTN2 "Reticulon-2" species:9606... 118 0.00011 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 112 0.00013 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 108 0.00023 1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 110 0.00037 1
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 106 0.00041 1
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 106 0.00041 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 114 0.00053 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 114 0.00053 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 108 0.00078 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 108 0.00087 1
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 113/226 (50%), Positives = 157/226 (69%)
Query: 1 MPIYTSSSESDNEXXXXXXXXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
MPI+T SS SD+E L Q+ IH I GGGKVAD+LLW+ ++A+L
Sbjct: 1 MPIFTGSS-SDSEDERTIHKTTK-----LFTRQRSIHSIFGGGKVADILLWREPKIAATL 54
Query: 61 LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
+IG++++WFL EVVEYNF+TL+CH S+TSML FIWS ++F NW+ P IPEV+L ES+F
Sbjct: 55 VIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSF 114
Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
+++A + VRFN+IL+KLLDVACG+DP LF L LYI S+IGTYF+F+NLL++GF+ +
Sbjct: 115 KQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSM 174
Query: 181 LTVPFLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVK 226
T+P +Y+ Y++ VD A + ++ L+KIPRG VK
Sbjct: 175 QTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVK 220
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 82/225 (36%), Positives = 133/225 (59%)
Query: 5 TSSSESDNEXXXXXXX--XXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLI 62
+SSS+ +NE L G ++P+H +LGGGK AD+ +WK+ +S +
Sbjct: 43 SSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFG 102
Query: 63 GMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFRE 122
G TV W LFE++EY+ +TLLCH+ I ++ LF+WS F + PP+IPEV + E +
Sbjct: 103 GATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQ 162
Query: 123 VASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILT 182
+AS LR+ N+ +S L ++A G+D F+ IA L++ S++G +SFL L Y+ + + T
Sbjct: 163 LASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFT 222
Query: 183 VPFLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVKE 227
VP YD+Y++ VD ++ +++ +KIPRGP+K+
Sbjct: 223 VPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKD 267
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 78/198 (39%), Positives = 123/198 (62%)
Query: 29 LLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISIT 88
L G ++P+H +LGGGK AD+ +WKN +S +L G T W +FE++EY+ +TLLCH+ I
Sbjct: 73 LFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIV 132
Query: 89 SMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPG 148
+ LF+WS F N PP+IPEV + E ++AS LR+ N+ S L ++A G+D
Sbjct: 133 VLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLK 192
Query: 149 LFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREXXXXXXX 208
F++ IA L++ S++G F+FL L Y+ + + TVP YD+Y++ VD + ++
Sbjct: 193 KFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQ 252
Query: 209 XXXXNSQFLNKIPRGPVK 226
+ + L+KIP GP+K
Sbjct: 253 YAVLDEKVLSKIPLGPLK 270
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 86/222 (38%), Positives = 133/222 (59%)
Query: 5 TSSSESDNEXXXXXXXXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGM 64
+SSSES+ E + G +KP+H +LGGGK ADV LW++ +S ++L
Sbjct: 29 SSSSESEYEKPDSPSAVKAKIYR-MFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVA 87
Query: 65 TVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVA 124
T IW LFE+VEY+ ++LLCHISI ++ LF+WS N PQIPE+ + E F VA
Sbjct: 88 TAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVA 147
Query: 125 STLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVP 184
S+LR N+ L +A G+D F++V+ L+I SV+G +F+FL L+Y+ F+ + TVP
Sbjct: 148 SSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVP 207
Query: 185 FLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVK 226
LY+++++ VD +A++ + + L+KIP +K
Sbjct: 208 MLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLK 249
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 81/226 (35%), Positives = 126/226 (55%)
Query: 6 SSSESDNEXXXXXXXXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMT 65
S S+ D + L G +KP+H +LGGGK AD+ LW+N VS +L +T
Sbjct: 29 SDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVT 88
Query: 66 VIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVAS 125
W LFE+ EY+ + LCH +I ++ ALF+WS F + P IPEV + E ++ S
Sbjct: 89 ASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVS 148
Query: 126 TLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPF 185
LR+ N+ L+ L ++A GKD FILVIA L++ S+IG+ ++FL L Y + + T+P
Sbjct: 149 GLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPV 208
Query: 186 LYDRYDEHVDYIADREXXXXXXXXXXXNSQFL----NKIPRGPVKE 227
LY++Y++ VD ++ + + L +KIPRG + +
Sbjct: 209 LYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNK 254
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 56/166 (33%), Positives = 90/166 (54%)
Query: 29 LLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISIT 88
L + IH+ILGGG VADV+LW+ VS ++ W +FE Y TL+ + +
Sbjct: 8 LFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLL 67
Query: 89 SMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPG 148
+ LF+WSK A N P +PE + E+ E + LR+ NK+L D+A +D
Sbjct: 68 LLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSE 127
Query: 149 LFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHV 194
L+ V L++ S+IG+ F L + + ++TVP Y+RY++++
Sbjct: 128 LYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 55/163 (33%), Positives = 93/163 (57%)
Query: 33 QKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLA 92
++ +H + G VAD+++WKN LL T++WFLFE Y+F + + + S++
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 93 LFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFIL 152
LF+W+K A FN PQ+P + + E VA +RV N +L+ ++ G++
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 153 VIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
V +L+ S +G + +FL +LYLG + L +PFLY+RY + +D
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID 164
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 215 (80.7 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 45/102 (44%), Positives = 62/102 (60%)
Query: 4 YTSSSESDNEXXXXXX-XXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLI 62
+ SSS SD+E L G +KP+H +LGGG ADV LW++ +SAS+L
Sbjct: 26 HDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLG 85
Query: 63 GMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
T IW LFE+VEY+F++L+CHI I ++ ALF+ S F N
Sbjct: 86 VATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMN 127
Score = 72 (30.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 170 LNLLYLGFICILTVPFLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVK 226
+ LL F+ + TVP LY+++++ VD +A++ + + L+K+P +K
Sbjct: 204 VQLLDSCFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLK 260
Score = 36 (17.7 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 117 ESTFREVASTLRVRFNKILSKL 138
E T +E+ V K+LSKL
Sbjct: 233 EKTLKELKKHYMVFDEKVLSKL 254
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 232 (86.7 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 49/151 (32%), Positives = 83/151 (54%)
Query: 46 ADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNW 105
AD+LLW+ +S ++I TV W +FE F+++ + + ++ F+ ++ + F N
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 106 KPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAI-LYIFSVIG 164
+ +PE++L E A++ R++ N +L DV G D LF + I L++ S IG
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 165 TYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
+Y S LLY+G I +T+P LY +Y VD
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVD 214
Score = 50 (22.7 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 29 LLGSQKPIHDILGGGK 44
LLG Q +H +GGGK
Sbjct: 25 LLGRQITVHQFMGGGK 40
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 43/131 (32%), Positives = 72/131 (54%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
VAD+LLW+N T + LLI T WFLFE YN ++ + ++ + + F+W+K A N
Sbjct: 6 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65
Query: 105 WKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIG 164
P +P + + E + A LRV N +LS D+ ++P + +L + +++ I
Sbjct: 66 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNP-IRLLQVFFHHLWQTIC 124
Query: 165 TYFSFLNLLYL 175
F FL+++YL
Sbjct: 125 CIFLFLHVMYL 135
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 144 (55.7 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
V D+ LW+ ++ S L+ T W L + +T++ I I + +F+W +
Sbjct: 16 VEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLS 75
Query: 105 WKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIG 164
P++ + + E E + R+ +++ + V + +F + +I S IG
Sbjct: 76 KVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIG 135
Query: 165 TYFSFLNLLYLGFICILTVPFLYDRYDEHV 194
F L++G + LTVP L++ Y + +
Sbjct: 136 NLLDFHTCLFIGLVMGLTVPKLWEEYGDQI 165
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 133 (51.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/163 (25%), Positives = 79/163 (48%)
Query: 39 ILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSK 98
ILGGGKVAD LLWK++ + + + I++ F VT L + + + LF+
Sbjct: 378 ILGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVASVFLFLHGI 437
Query: 99 GAE-FFNWKPPQIP--EVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIA 155
E F + +IP + L + + +++ ++ +N + L + G D F V+
Sbjct: 438 LPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALRSLCQGNDWSFFFKVVF 497
Query: 156 ILYIFSVIGTYFSFLNLLYLGFICILTVPFL-YDRYDEHVDYI 197
+L S+ G S ++ +G + I + FL Y++ ++ +D I
Sbjct: 498 VLLALSLAGA-ISLHSIFVIG-LPIAFLAFLVYEKKEQEIDSI 538
>TAIR|locus:2058223 [details] [associations]
symbol:AT2G43420 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS]
[GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
donors, NAD or NADP as acceptor" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0016126 EMBL:AC002335 GO:GO:0047012 UniGene:At.12188
EMBL:DQ415280 EMBL:AK117930 EMBL:AY045841 IPI:IPI00543388
PIR:H84865 RefSeq:NP_565998.1 UniGene:At.59216
ProteinModelPortal:A9X4U2 SMR:A9X4U2 PaxDb:A9X4U2 PRIDE:A9X4U2
EnsemblPlants:AT2G43420.1 GeneID:818943 KEGG:ath:AT2G43420
TAIR:At2g43420 InParanoid:Q94AR9 OMA:HAHICAA PhylomeDB:A9X4U2
ProtClustDB:CLSN2688905 Genevestigator:A9X4U2 Uniprot:A9X4U2
Length = 561
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/171 (24%), Positives = 81/171 (47%)
Query: 33 QKPIHDILGGGKVADVLLWKNI--TVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSM 90
Q +LG GKVAD+LLW+N T + L++ + WF F F + +
Sbjct: 367 QSTADQLLGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFS--GNTFTSSAAQLLFIFA 424
Query: 91 LALF-IWSKGAEFFNWKPPQIP--EVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
+AL+ + ++ F ++ +IP + ES R+++S + V +N+ + ++ G D
Sbjct: 425 VALYGVSFVPSKIFGFQVNKIPPWRFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDW 484
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIA 198
F + LY+ +I + S L+ T F+Y++Y+ + ++A
Sbjct: 485 IKFFKIAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYELELYHLA 534
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 36/174 (20%), Positives = 78/174 (44%)
Query: 32 SQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISI 87
S +P+ I +V D++ W+++ + G T+I L F V+ +L +S+
Sbjct: 56 SSQPV-SIFSTSQVHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSV 113
Query: 88 TSMLALF---IWS--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVA 142
T ++ I + K E +K ++ L F + V NK L ++ +
Sbjct: 114 TISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLF 173
Query: 143 CGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+D + + +++ + +G F+ + LL L + + +VP +Y++Y +D+
Sbjct: 174 LVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDH 227
>UNIPROTKB|K7EMR7 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:CH471126
EMBL:AC138534 PANTHER:PTHR10994 HGNC:HGNC:10468
Ensembl:ENST00000590526 Uniprot:K7EMR7
Length = 271
Score = 118 (46.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 41/168 (24%), Positives = 81/168 (48%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSM---LALFIWSK 98
G KVAD+L WK+ S + G+ V L ++ ++ V++ H+++ + ++L ++ K
Sbjct: 68 GSKVADLLYWKDTRTSGVVFTGLMVS--LLCLLHFSIVSVAAHLALLLLCGTISLRVYRK 125
Query: 99 GAEFFNW----KPPQ----IPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLF 150
+ + P Q + + RE T R ++ + R ++L +D
Sbjct: 126 VLQAVHRGDGANPFQAYLDVDLTLTREQTER-LSHQITSRVVSAATQLRHFFLVEDLVDS 184
Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD-YI 197
+ + + YI + +G F+ L LL LG I + T+P LY ++ +D Y+
Sbjct: 185 LKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYV 232
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 115 (45.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/159 (19%), Positives = 78/159 (49%)
Query: 47 DVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIW---------- 96
D+L W++I ++ G +V+ LF +++++ V+++ ++++ ++ A +
Sbjct: 23 DLLYWRDIK-QTGIVFG-SVLLMLFSLIQFSVVSVMAYLALAALSATISFRIYKSVLQAV 80
Query: 97 SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAI 156
K E +K E+ L + ++ L+V N I +L + +D + +
Sbjct: 81 QKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVL 140
Query: 157 LYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
+++ + +G F+ L LL + + + ++P +YD+Y +D
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQID 179
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 115 (45.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/174 (18%), Positives = 78/174 (44%)
Query: 32 SQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISI 87
S +P+ + +V D++ W+++ + G T+I L F V+ +L +S+
Sbjct: 56 SSQPV-SLFSTSQVHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSV 113
Query: 88 TSMLALF---IWS--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVA 142
T ++ I + K E +K ++ L F + V N+ L ++ +
Sbjct: 114 TISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLF 173
Query: 143 CGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+D + + +++ + +G F+ + LL L + + ++P +Y++Y +D+
Sbjct: 174 LVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDH 227
>UNIPROTKB|O75298 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=NAS] [GO:0004871 "signal
transducer activity" evidence=NAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0008219
GO:GO:0004871 GO:GO:0030176 PANTHER:PTHR10994 EMBL:AF004222
EMBL:AF004223 EMBL:AF004224 EMBL:AF038540 EMBL:BK001686
EMBL:BK001687 EMBL:BK001688 IPI:IPI00024983 IPI:IPI00216112
IPI:IPI00410134 RefSeq:NP_005610.1 RefSeq:NP_996783.1
RefSeq:NP_996784.1 UniGene:Hs.47517 ProteinModelPortal:O75298
SMR:O75298 IntAct:O75298 STRING:O75298 PhosphoSite:O75298
PaxDb:O75298 PRIDE:O75298 Ensembl:ENST00000245923
Ensembl:ENST00000344680 Ensembl:ENST00000430715 GeneID:6253
KEGG:hsa:6253 UCSC:uc002pcb.3 UCSC:uc002pcc.3 CTD:6253
GeneCards:GC19M045988 HGNC:HGNC:10468 HPA:HPA034941 MIM:603183
MIM:604805 neXtProt:NX_O75298 Orphanet:100993 PharmGKB:PA34881
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
InParanoid:O75298 OMA:REPITGQ OrthoDB:EOG4FJ88W PhylomeDB:O75298
ChiTaRS:RTN2 GenomeRNAi:6253 NextBio:24285 Bgee:O75298
CleanEx:HS_RTN2 Genevestigator:O75298 GermOnline:ENSG00000125744
Uniprot:O75298
Length = 545
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 41/168 (24%), Positives = 81/168 (48%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSM---LALFIWSK 98
G KVAD+L WK+ S + G+ V L ++ ++ V++ H+++ + ++L ++ K
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGLMVS--LLCLLHFSIVSVAAHLALLLLCGTISLRVYRK 399
Query: 99 GAEFFNW----KPPQ----IPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLF 150
+ + P Q + + RE T R ++ + R ++L +D
Sbjct: 400 VLQAVHRGDGANPFQAYLDVDLTLTREQTER-LSHQITSRVVSAATQLRHFFLVEDLVDS 458
Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD-YI 197
+ + + YI + +G F+ L LL LG I + T+P LY ++ +D Y+
Sbjct: 459 LKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYV 506
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 34/161 (21%), Positives = 72/161 (44%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---IWS 97
V D++ W+++ + G T+I L F V+ +L +S+T ++ I +
Sbjct: 48 VHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 106
Query: 98 --KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIA 155
K E +K ++ L F + V NK L ++ + +D + +
Sbjct: 107 VQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAV 166
Query: 156 ILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+++ + +G F+ + LL L + I +VP +Y++Y +D+
Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPVVYEKYKTQIDH 207
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 108 (43.1 bits), Expect = 0.00023, P = 0.00023
Identities = 35/162 (21%), Positives = 74/162 (45%)
Query: 44 KVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---IW 96
KV D+L W++I ++ G ++ L F +V L +S+T ++ I
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 69
Query: 97 S--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVI 154
+ K E ++ +V + E ++ +S + N + +L + D +
Sbjct: 70 AIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFA 129
Query: 155 AILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
++++F+ +G F+ L LL L I + +VP +Y+R+ +D+
Sbjct: 130 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDH 171
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 33/161 (20%), Positives = 72/161 (44%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---IWS 97
V D++ W+++ + G T+I L F V+ +L +S+T ++ I +
Sbjct: 108 VHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 166
Query: 98 --KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIA 155
K E +K ++ L F + V N+ L ++ + +D + +
Sbjct: 167 VQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 226
Query: 156 ILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+++ + +G F+ + LL L + I +VP +Y++Y +D+
Sbjct: 227 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDH 267
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 106 (42.4 bits), Expect = 0.00041, P = 0.00041
Identities = 35/162 (21%), Positives = 74/162 (45%)
Query: 44 KVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---IW 96
KV D+L W++I ++ G ++ L F +V L +S+T ++ I
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 69
Query: 97 S--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVI 154
+ K E ++ EV + E ++ +++ N + +L + D +
Sbjct: 70 AIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 129
Query: 155 AILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
++++F+ +G F+ L LL L I + +VP +Y+R+ +D+
Sbjct: 130 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDH 171
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 106 (42.4 bits), Expect = 0.00041, P = 0.00041
Identities = 35/162 (21%), Positives = 74/162 (45%)
Query: 44 KVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---IW 96
KV D+L W++I ++ G ++ L F +V L +S+T ++ I
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 69
Query: 97 S--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVI 154
+ K E ++ EV + E ++ +++ N + +L + D +
Sbjct: 70 AIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 129
Query: 155 AILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
++++F+ +G F+ L LL L I + +VP +Y+R+ +D+
Sbjct: 130 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDH 171
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 33/172 (19%), Positives = 82/172 (47%)
Query: 34 KPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLAL 93
KP+ L K ++L W++I ++ G +V+ LF + +++ V+++ ++++ ++ A
Sbjct: 568 KPL-PFLSKRKAIELLYWRDIK-QTGIVFG-SVLLMLFSLTQFSVVSVIAYLALAALSAT 624
Query: 94 FIW----------SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVAC 143
+ K E +K E+ L + ++ L+ N I+ +L +
Sbjct: 625 ISFRIYKSVLQAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFL 684
Query: 144 GKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
+D + ++++ + +G F+ L LL + + + ++P +YD+Y +D
Sbjct: 685 VQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQID 736
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 32/166 (19%), Positives = 80/166 (48%)
Query: 44 KVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIW------- 96
K ++L W+++ S L+ G +++ LF + +++ V+++ ++++ S+ A +
Sbjct: 579 KAMELLYWRDLKKSG-LVFG-SLLLMLFSLTQFSVVSVVAYLALASLSATISFRVYKSVL 636
Query: 97 ---SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILV 153
K E +K E+ L ++ A ++ N L +L + +D +
Sbjct: 637 QAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSLKF 696
Query: 154 IAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIAD 199
++++ + +G F+ L LL + +C+ ++P +Y++Y +D D
Sbjct: 697 AVLMWLLTYVGALFNGLTLLIMVVVCMFSMPVVYEKYQAQIDQYVD 742
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 108 (43.1 bits), Expect = 0.00078, P = 0.00078
Identities = 35/164 (21%), Positives = 74/164 (45%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF--- 94
G V D+L W++I ++ G ++ L F +V L +S+T ++
Sbjct: 136 GSAVVDLLYWRDIK-KTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGV 194
Query: 95 IWS--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFIL 152
I + K E ++ +V + E ++ +S + N + +L + D +
Sbjct: 195 IQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLK 254
Query: 153 VIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
++++F+ +G F+ L LL L I + +VP +Y+R+ +D+
Sbjct: 255 FAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDH 298
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 108 (43.1 bits), Expect = 0.00087, P = 0.00087
Identities = 34/163 (20%), Positives = 74/163 (45%)
Query: 43 GKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---I 95
G + D+L W++I ++ G ++ L F +V L +S+T ++ I
Sbjct: 158 GNIVDLLYWRDIK-KTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 216
Query: 96 WS--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILV 153
+ K E ++ +V + E ++ +S + N + +L + D +
Sbjct: 217 QAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKF 276
Query: 154 IAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
++++F+ +G F+ L LL L I + +VP +Y+R+ +D+
Sbjct: 277 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDH 319
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.144 0.440 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 228 202 0.00090 111 3 11 22 0.41 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 600 (64 KB)
Total size of DFA: 171 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.97u 0.08s 17.05t Elapsed: 00:00:02
Total cpu time: 16.97u 0.08s 17.05t Elapsed: 00:00:02
Start: Fri May 10 00:26:43 2013 End: Fri May 10 00:26:45 2013