BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027121
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/228 (52%), Positives = 169/228 (74%), Gaps = 6/228 (2%)
Query: 1 MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
MPI+T SS SD+E R T + L Q+ IH I GGGKVAD+LLW+ ++A+L
Sbjct: 1 MPIFTGSS-SDSEDERTIHKTTK-----LFTRQRSIHSIFGGGKVADILLWREPKIAATL 54
Query: 61 LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
+IG++++WFL EVVEYNF+TL+CH S+TSML FIWS ++F NW+ P IPEV+L ES+F
Sbjct: 55 VIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSF 114
Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
+++A + VRFN+IL+KLLDVACG+DP LF L LYI S+IGTYF+F+NLL++GF+ +
Sbjct: 115 KQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSM 174
Query: 181 LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN 228
T+P +Y+ Y++ VD A + R+MKK++++ ++ L+KIPRG VK
Sbjct: 175 QTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNK 222
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 186 bits (473), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 130/201 (64%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
RL G ++P+H +LGGGK AD+ +WK+ +S + G TV W LFE++EY+ +TLLCH+ I
Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127
Query: 88 TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
++ LF+WS F + PP+IPEV + E ++AS LR+ N+ +S L ++A G+D
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
F+ IA L++ S++G +SFL L Y+ + + TVP YD+Y++ VD ++ +KK
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247
Query: 208 MFRRFNSQFLNKIPRGPVKEN 228
+ +++ +KIPRGP+K+
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDK 268
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 128/199 (64%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
RL G ++P+H +LGGGK AD+ +WKN +S +L G T W +FE++EY+ +TLLCH+ I
Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131
Query: 88 TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
+ LF+WS F N PP+IPEV + E ++AS LR+ N+ S L ++A G+D
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
F++ IA L++ S++G F+FL L Y+ + + TVP YD+Y++ VD + ++ +KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251
Query: 208 MFRRFNSQFLNKIPRGPVK 226
+ + + L+KIP GP+K
Sbjct: 252 QYAVLDEKVLSKIPLGPLK 270
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 12 NEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLF 71
+P PS + + R+ G +KP+H +LGGGK ADV LW++ +S ++L T IW LF
Sbjct: 37 EKPDSPSAV--KAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLF 94
Query: 72 EVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRF 131
E+VEY+ ++LLCHISI ++ LF+WS N PQIPE+ + E F VAS+LR
Sbjct: 95 ELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNEL 154
Query: 132 NKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYD 191
N+ L +A G+D F++V+ L+I SV+G +F+FL L+Y+ F+ + TVP LY++++
Sbjct: 155 NQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHE 214
Query: 192 EHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
+ VD +A++ + ++K + F+ + L+KIP +K
Sbjct: 215 DKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLK 249
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 13 EPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFE 72
+P PS + + RL G +KP+H +LGGG ADV LW++ +SAS+L T IW LFE
Sbjct: 38 KPESPSAL--KAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFE 95
Query: 73 VVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFN 132
+VEY+F++L+CHI I ++ ALF+ S F N PP+IPE+ ++E F + S LR N
Sbjct: 96 LVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELN 155
Query: 133 KILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDE 192
+ L +A G+D F++V+ L+I SV+G +F+FL L+Y+ F+ + TVP LY+++++
Sbjct: 156 QAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHED 215
Query: 193 HVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
VD +A++ + +KK + F+ + L+K+P +K
Sbjct: 216 KVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLK 249
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
RL G +KP+H +LGGGK AD+ LW+N VS +L +T W LFE+ EY+ + LCH +I
Sbjct: 51 RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110
Query: 88 TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
++ ALF+WS F + P IPEV + E ++ S LR+ N+ L+ L ++A GKD
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
FILVIA L++ S+IG+ ++FL L Y + + T+P LY++Y++ VD ++ R +KK
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230
Query: 208 MFRRFNSQFL----NKIPRGPVKEN 228
+ + + L +KIPRG + +
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKK 255
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 128/201 (63%), Gaps = 4/201 (1%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
RL G ++P+H + GGGK AD+ LW+N VS +L TV W LFE++EYN +TL HISI
Sbjct: 47 RLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISI 106
Query: 88 TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
++ LF+WS + F + P IPEV + E ++AS LR+ N+ + L D+A G+D
Sbjct: 107 LALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDL 166
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
F+LVIA L++ S +G+ +FL L+Y+ + + T+P LY++Y++ VD ++ R +KK
Sbjct: 167 KKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKK 226
Query: 208 MFRRFN----SQFLNKIPRGP 224
+ F+ S+ ++KIP+G
Sbjct: 227 QYVEFDVKVLSKVMSKIPKGA 247
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 132/223 (59%), Gaps = 2/223 (0%)
Query: 4 YTSSSESDNEPSR--PSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLL 61
+T + + + S + R RL QKPIH +LGGGK ADVLLW+N +SAS+L
Sbjct: 18 FTETVQKNKHGSSFFEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVL 77
Query: 62 IGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFR 121
+G T IW LFE + ++F++L+C+ + M+A F+WS + F N ++P ++L + F
Sbjct: 78 MGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFA 137
Query: 122 EVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICIL 181
EV + N+ L L D+AC + F++ + L++ +++G+ +FL +LY+GF+
Sbjct: 138 EVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAH 197
Query: 182 TVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGP 224
T+P LY+RY++ VD D + +++ ++ FL++IP G
Sbjct: 198 TMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSGK 240
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 120/196 (61%), Gaps = 12/196 (6%)
Query: 36 IHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFI 95
++ LGGG+ AD++ WKN S ++L T+IWFLFEVVEY F+T LC I + + I
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 96 WS--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKI---LSKLLDVACGKDPGLF 150
WS ++ KPP I ++ + ES +R + FNKI + KL D++ GKD L
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISESNWRFL-------FNKINWFIIKLYDISSGKDFRLL 134
Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFR 210
L + L+I SV+G YFS L LLY+ F+ + T+P LY++Y+E + Y A + R MKK+
Sbjct: 135 FLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLN 194
Query: 211 RFNSQFLNKIPRGPVK 226
+FNS+ +NKIP+ K
Sbjct: 195 KFNSKVINKIPKAQAK 210
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 15 SRPSRTTPRPRPP-RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEV 73
+P P P R+ G ++PIH +LGGGK ADVLLW++ V+ LL +TVIW LF
Sbjct: 39 EKPDSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGF 98
Query: 74 VEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNK 133
+T LC SI +L F+WS N P + ++ + E + AS + N
Sbjct: 99 GGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNC 155
Query: 134 ILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEH 193
+ L +A +D F++ + L++ SVIG +FSFL+LLY+ F+ I TVP LY++Y++
Sbjct: 156 AFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDE 215
Query: 194 VDYIADREFRRMKKMFRRFNSQFLNKIPR 222
+D IA++ MKK ++ F ++FL+KIP
Sbjct: 216 IDPIAEKAVIEMKKHYQVFEAKFLSKIPH 244
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
RLLG Q +H +GGGK AD+LLW+ +S ++I TV W +FE F+++ + +
Sbjct: 24 RLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLL 83
Query: 88 TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
++ F+ ++ + F N + +PE++L E A++ R++ N +L DV G D
Sbjct: 84 IVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDF 143
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
LF V+ L++ S IG+Y S LLY+G I +T+P LY +Y VD RR+
Sbjct: 144 RLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSH 203
Query: 208 MFRRFNSQFLNKIPRGPVKE 227
++ + ++++ K+
Sbjct: 204 HYKIVDENVISRLSWSLSKD 223
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%)
Query: 33 QKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLA 92
++ +H + G VAD+++WKN LL T++WFLFE Y+F + + + S++
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 93 LFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFIL 152
LF+W+K A FN PQ+P + + E VA +RV N +L+ ++ G++
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 153 VIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRF 212
V +L+ S +G + +FL +LYLG + L +PFLY+RY + +D R ++ +R+
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKI 181
Query: 213 NSQFLNKIPRGPVKE 227
+ + L KI P +
Sbjct: 182 DERLLQKIIAKPTNK 196
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 97/176 (55%)
Query: 37 HDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIW 96
H LG G VAD+LLW+N T + LLI T WFLFE YN ++ + ++ + + F+W
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 97 SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAI 156
+K A N P +P + + E + A LRV N +LS D+ ++P + V +
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 157 LYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRF 212
L+ S +GT + L L+Y+G + L+ P +Y++Y +H+D + + ++ + R+F
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVRNISRKF 189
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
+L + IH+ILGGG VADV+LW+ VS ++ W +FE Y TL+ + +
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 88 TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
+ LF+WSK A N P +PE + E+ E + LR+ NK+L D+A +D
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHV 194
L+ V L++ S+IG+ F L + + ++TVP Y+RY++++
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 36 IHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFI 95
+ ILG G VAD+ LWK+ S L+ T+ WFL E +E V LLC I + ML LF+
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 96 WSK-GAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVI 154
W+K G FF +PP E+ +S + + S + L L ++A GKD F+ I
Sbjct: 64 WAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGH----LLMLYEIAYGKDNKTFLKTI 119
Query: 155 AILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNS 214
+ I IG+Y S L +LY+ +C +T+P +Y ++ E +D + + F
Sbjct: 120 LYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVFK- 178
Query: 215 QFLNKIPRGPVKE 227
Q ++KIPR P E
Sbjct: 179 QVVSKIPRAPKVE 191
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
V D+ LW+ ++ S L+ T W L + +T++ I I + +F+W +
Sbjct: 16 VEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLS 75
Query: 105 WKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIG 164
P++ + + E E + R+ +++ + V + +F + +I S IG
Sbjct: 76 KVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIG 135
Query: 165 TYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
F L++G + LTVP L++ Y + +
Sbjct: 136 NLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQ 166
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 5 TSSSESDNE-PSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIG 63
T+ S+S E PS+ SR ILGGGKVAD LLWK++ + +
Sbjct: 362 TAGSQSKREGPSKASR-------------------ILGGGKVADTLLWKDLKQTLIAIFI 402
Query: 64 MTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAE-FFNWKPPQIP--EVILRESTF 120
+ I++ F VT L + + + LF+ E F + +IP + L + +
Sbjct: 403 LISIYYNFVATGSTVVTALSKALLVASVFLFLHGILPEKIFGYTVEKIPASQFHLSKDSS 462
Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
+++ ++ +N + L + G D F V+ +L S+ G S ++ +G
Sbjct: 463 HDLSLSVISSWNTTVKALRSLCQGNDWSFFFKVVFVLLALSLAGA-ISLHSIFVIGLPIA 521
Query: 181 LTVPFLYDRYDEHVDYI 197
+Y++ ++ +D I
Sbjct: 522 FLAFLVYEKKEQEIDSI 538
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIW----- 96
G V D+L W+++ S + G V+ L + ++ ++++ ++ + S+LA+ I
Sbjct: 22 GCAVQDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYL-VLSLLAVTISYRVYK 78
Query: 97 ------SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLF 150
K E +KP ++ L F++ ST N L ++ + +D
Sbjct: 79 SVLQAVQKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDS 138
Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFR 210
+ + ++++ + +G F+ + LL LG + T P +Y++Y +D+ +K +
Sbjct: 139 LKLALLMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHVKSITE 198
Query: 211 RFNSQF 216
+ ++
Sbjct: 199 KIQAKL 204
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 32/171 (18%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLA---LFIWSKGAE 101
VAD+L WK+ S ++ G+ + L ++ ++ V++ H+++ + A L ++ K +
Sbjct: 272 VADLLYWKDTRTSGAVFTGL--MASLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQ 329
Query: 102 FFNWKPPQIP--------EVILRESTFR--------EVASTLRVRFNKILSKLLDVACGK 145
+ P + RE T R V++ ++R ++ L+D
Sbjct: 330 AVHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDS---- 385
Query: 146 DPGLFILVIAIL-YIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
L +A+L YI + +G F+ L L+ LG + + TVP LY ++ +D
Sbjct: 386 ------LKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQID 430
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIW----- 96
G V D+L W+++ S + G V+ L + ++ ++++ ++ + S+L++ I
Sbjct: 23 GCAVRDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYL-VLSLLSVTISFRVYK 79
Query: 97 ------SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLF 150
K E +KP ++ L +F++ S+ N L ++ + +D
Sbjct: 80 SVLQAVQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAHVNHALKSIVRLFLVEDLVDS 139
Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFR 210
+ + ++++ + IG F+ + LL LG + T P +Y++Y +D+ ++K +
Sbjct: 140 LKLALLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQVKSITE 199
Query: 211 RFNSQF 216
+ ++
Sbjct: 200 KIQAKL 205
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 54/185 (29%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLC--HISITSM--------- 90
G KVAD+L WK+ S + G+ V+LLC H SI S+
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGL-------------MVSLLCLLHFSIVSVAAHLALLLL 388
Query: 91 ---LALFIWSK---------GAEFFNWK-------PPQIPEVILRESTFREVASTLRVRF 131
++L ++ K GA F + E + + T R V++ ++R
Sbjct: 389 CGTISLRVYRKVLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRH 448
Query: 132 NKILSKLLDVACGKDPGLFILVIAIL-YIFSVIGTYFSFLNLLYLGFICILTVPFLYDRY 190
++ L+D L +A+L YI + +G F+ L LL LG I + T+P LY ++
Sbjct: 449 FFLVEDLVDS----------LKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQH 498
Query: 191 DEHVD 195
+D
Sbjct: 499 QAQID 503
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 21/196 (10%)
Query: 13 EPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNIT-------VSASLLIGMT 65
E PS T R P + S + L V D+L W++I S LL+ +T
Sbjct: 978 EKKLPSDTEKEDRSPSAIFSAE-----LSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLT 1032
Query: 66 VIWFLFEVVEYNFVTLLCHISITSMLALF-----IWSKGAEFFNWKPPQIPEVILRESTF 120
V F +V L +S+T ++ K E ++ EV + E
Sbjct: 1033 V----FSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELV 1088
Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
++ +++ N + +L + D + ++++F+ +G F+ L LL L I +
Sbjct: 1089 QKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISL 1148
Query: 181 LTVPFLYDRYDEHVDY 196
+VP +Y+R+ +D+
Sbjct: 1149 FSVPVIYERHQAQIDH 1164
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 33 QKPIHDILGGGKVADVLLWKN--ITVSASLLIGMTVIWFLFEVVEY--NFVTLLCHISIT 88
Q +LG GKVAD+LLW+N T + L++ + WF F + + LL ++
Sbjct: 367 QSTADQLLGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFSGNTFTSSAAQLLFIFAVA 426
Query: 89 SMLALFIWSKGAEFFNWKPPQIP--EVILRESTFREVASTLRVRFNKILSKLLDVACGKD 146
F+ SK F ++ +IP + ES R+++S + V +N+ + ++ G D
Sbjct: 427 LYGVSFVPSK---IFGFQVNKIPPWRFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGD 483
Query: 147 PGLFILVIAILYIFSVIGT------YFSFLNLLYLGFICILTVPFLYDRYDEHVDYIA 198
F + LY+ +I + F+ ++ + GF F+Y++Y+ + ++A
Sbjct: 484 WIKFFKIAGSLYLLKLIVSRSLAAFLFTVMSFSFTGF-------FIYEQYELELYHLA 534
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLL---CHISITSMLALFIWSK--- 98
V D+L W++I +SA L G+T+ L + +++ +++ C I ++ L L +++K
Sbjct: 134 VKDLLYWRDILLSAGCLTGVTL--SLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLH 191
Query: 99 ------GAEFFNW--------KPPQIPEVILRE-STFREVASTLRVRFNKILSKLLDVAC 143
GA F + Q E+ R S TLR F ++ +L
Sbjct: 192 ALKRGNGANPFQYYLDADLKLTTKQAEEITARVLSLLSTTICTLRSLF--LVEEL----- 244
Query: 144 GKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFR 203
KD F+++I Y+ + +G F+ + +L L I T P LY ++ VD+
Sbjct: 245 -KDSLKFLVII---YLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVS---- 296
Query: 204 RMKKMFRRFNSQFLNKIPRGPVKEN 228
+ K F S+ + + P K+
Sbjct: 297 LVSKKGNAFRSKIQGTVKKPPAKQK 321
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 36/204 (17%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLL---CHISITSMLALFIWSK--- 98
V D+L W++ +S L G+T+ L + +++ +++ C I ++ L L +++K
Sbjct: 134 VKDLLYWRDTLLSTGCLTGVTL--SLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLH 191
Query: 99 ------GAEFFNW--------KPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACG 144
GA F + Q E++ R F ++TL L L V
Sbjct: 192 ALKRGNGANPFQYYLDTDLKLTTKQAEEIVAR--AFSLASTTLCT-----LRSLFLVEEL 244
Query: 145 KDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRR 204
KD F++++ Y+ + +G F+ + +L L I T P LY ++ VD+
Sbjct: 245 KDSLKFLVIV---YLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVS----L 297
Query: 205 MKKMFRRFNSQFLNKIPRGPVKEN 228
+ K F S+F + P K+
Sbjct: 298 VSKKVNAFRSKFQGAAKKPPAKQK 321
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 42 GGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIW----- 96
G V D+L W+++ S + G V+ L + ++ ++++ ++ + S+L + I
Sbjct: 23 GCAVRDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYL-VLSLLTVTISYRVYK 79
Query: 97 ------SKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLF 150
K E +KP ++ L +F++ + N L ++ + D
Sbjct: 80 SVLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDS 139
Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFR 210
+ + ++++ + +G F+ + LL LG + T P +Y++Y +D+ ++K +
Sbjct: 140 LKLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVKSITE 199
Query: 211 RFNSQF 216
+ ++
Sbjct: 200 KIQAKL 205
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF-----I 95
V D++ W+++ + G T+I L F V+ +L +S+T ++
Sbjct: 844 VHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQA 902
Query: 96 WSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIA 155
K E +K ++ L F + V N+ L ++ + +D + +
Sbjct: 903 VQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 962
Query: 156 ILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+++ + +G F+ + LL L + I +VP +Y++Y +D+
Sbjct: 963 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDH 1003
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 40 LGGGKVADVLLWKNIT-------VSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLA 92
L V D+L W++I S LL+ +TV F +V L +S+T
Sbjct: 970 LNKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTV----FSIVSVTAYIALALLSVTISFR 1025
Query: 93 LF-----IWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
++ K E ++ EV + E ++ +++ N + +L + D
Sbjct: 1026 IYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDL 1085
Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+ ++++F+ +G F+ L LL L I + ++P +Y+R+ +D+
Sbjct: 1086 VDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDH 1134
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLC 83
RLL S P+HD++ W+++ + G T+I L F V+ +L
Sbjct: 745 RLL-SDFPVHDLI---------FWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILA 793
Query: 84 HISITSMLALF-----IWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKL 138
+S+T ++ K E +K ++ L F + V NK L +
Sbjct: 794 LLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLI 853
Query: 139 LDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+ + +D + + +++ + +G F+ + LL L + + +VP +Y++Y +D+
Sbjct: 854 IRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDH 911
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 28 RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLC 83
RLL S P+HD++ W+++ + G T+I L F V+ +L
Sbjct: 769 RLL-SDFPVHDLI---------FWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILA 817
Query: 84 HISITSMLALF-----IWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKL 138
+S+T ++ K E +K ++ L F + V NK L +
Sbjct: 818 LLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLI 877
Query: 139 LDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDY 196
+ + +D + + +++ + +G F+ + LL L + + +VP +Y++Y +D+
Sbjct: 878 IRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDH 935
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 41.2 bits (95), Expect = 0.006, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 3 IYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNIT------- 55
+ + S + E PS T R + S + L V D+L W++I
Sbjct: 939 VKSKSLTKEAEKKLPSDTEKEDRSLSAVLSAE-----LSKTSVVDLLYWRDIKKTGVVFG 993
Query: 56 VSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALF-----IWSKGAEFFNWKPPQI 110
S LL+ +TV F +V L +S+T ++ K E ++
Sbjct: 994 ASLFLLLSLTV----FSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLE 1049
Query: 111 PEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFL 170
EV + E ++ +++ N + +L + D + ++++F+ +G F+ L
Sbjct: 1050 SEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGL 1109
Query: 171 NLLYLGFICILTVPFLYDRYDEHVDY 196
LL L I + ++P +Y+R+ +D+
Sbjct: 1110 TLLILALISLFSIPVIYERHQVQIDH 1135
>sp|Q56X72|RTNLS_ARATH Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2
SV=2
Length = 487
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/173 (16%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 47 DVLLWKNITVSASLLIGMTVIWFLFEV----VEYNFVTLLCHISITSMLALFIWSKGAEF 102
D+++W++++ S +L+ G + + ++F++++ ++ + + +F+
Sbjct: 232 DLVMWRDVSRS-TLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHR 290
Query: 103 FNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSV 162
+ + V +RE + + + N+ L +L + G DP + + +L++ +
Sbjct: 291 GMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSG-DPSTTLKMGVVLFVLAR 349
Query: 163 IGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQ 215
G+ + NL GF+ T+P ++ Y H + RR + + N +
Sbjct: 350 CGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHK 402
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/181 (18%), Positives = 76/181 (41%), Gaps = 10/181 (5%)
Query: 45 VADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF-----I 95
V D++ W+++ + G T+I L F V+ +L +S+T ++
Sbjct: 48 VHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQA 106
Query: 96 WSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIA 155
K E +K ++ L F + V N+ L ++ + +D + +
Sbjct: 107 VQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 166
Query: 156 ILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQ 215
+++ + +G F+ + LL L + I +VP +Y++Y +D+ + K + + ++
Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAK 226
Query: 216 F 216
Sbjct: 227 L 227
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/183 (16%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 43 GKVADVLLWKNITVSASLLIGMTVIWFL----FEVVEYNFVTLLCHISITSMLALF---- 94
+V D++ W+++ + G T+I L F V+ +L +S+T ++
Sbjct: 66 SQVHDLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVI 124
Query: 95 -IWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILV 153
K E +K ++ L F + V N+ L ++ + +D + +
Sbjct: 125 QAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKL 184
Query: 154 IAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFN 213
+++ + +G F+ + LL L + + ++P +Y++Y +D+ + K + +
Sbjct: 185 AVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKSIVEKIQ 244
Query: 214 SQF 216
++
Sbjct: 245 AKL 247
>sp|Q12WA2|SYL_METBU Leucine--tRNA ligase OS=Methanococcoides burtonii (strain DSM 6242)
GN=leuS PE=3 SV=1
Length = 962
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 98 KGAEFFNWKPPQIPEVILRE-STFREVASTLRVRFNKILSKLLDVACGKDPGLFIL---- 152
KG F N+ P+ + + R + LRV FN + L D AC + GL L
Sbjct: 451 KGQWFLNYSNPEWKDKVYRCIENMDIIPEDLRVEFNNKVDWLKDKACARKKGLGTLLPFD 510
Query: 153 ---VIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDR 189
+I L ++ +Y+ + +G VP L+D
Sbjct: 511 NQWLIESLGDSTIYMSYYIIAKFIAMGIETEQLVPELFDH 550
>sp|Q3URU2|PEG3_MOUSE Paternally-expressed gene 3 protein OS=Mus musculus GN=Peg3 PE=1
SV=1
Length = 1571
Score = 32.7 bits (73), Expect = 1.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 6 SSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADV 48
S SD++ SR R TP PRP GS++ D+ G+ DV
Sbjct: 10 SDMNSDDDMSRSGRETPPPRPSHAFGSER---DLERRGRSRDV 49
>sp|Q8LDS3|RTNLR_ARATH Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2
SV=2
Length = 457
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 30/212 (14%)
Query: 8 SESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGG------KVADVLLWKNITVSASLL 61
S+ + S P +P P S +P D+ G ++D+++W+++ S +L
Sbjct: 159 SKKEKHSSVPLLASPSP------SSDQP-QDVCQGDLERIRENISDLIMWRDVAKS-TLW 210
Query: 62 IGMTVIWFL---FEVVEYNFVTLLCHISITSMLALFIWSKGAEFF-NWKPPQIPEVILRE 117
G I FL F +NF ++ IS +L L G F N ++ E RE
Sbjct: 211 FGFGCICFLSTCFAAKGFNF-SVFSAISYLGLLFL-----GVSFLSNTLRQRVTEEARRE 264
Query: 118 STFRE-----VASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNL 172
E +A + N +SK ++ G +P + + V + + + G + L
Sbjct: 265 LKLSEDDVLRIARRMLPITNLAISKTSELFSG-EPAMTLKVAPFVLMGAEYGYLITLWRL 323
Query: 173 LYLGFICILTVPFLYDRYDEHVDYIADREFRR 204
GF T+P LY Y ++ + RR
Sbjct: 324 CAFGFFLSFTIPKLYSCYASQLNQKVECAQRR 355
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.144 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,906,891
Number of Sequences: 539616
Number of extensions: 3420332
Number of successful extensions: 13575
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 13525
Number of HSP's gapped (non-prelim): 51
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)