BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027123
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q52K88|NUD13_ARATH Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13
PE=1 SV=1
Length = 202
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 143/171 (83%), Gaps = 4/171 (2%)
Query: 2 SVEARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENE--DTQTRIEVLMVSSPNRSDLVF 59
++ ARTGR QRYDNNFRLVSGCIPYRL KD E+++ D + +++VLM+SSPNR DLVF
Sbjct: 3 NLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDLVF 62
Query: 60 PKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSK--QDLHSLEGGCRGYM 117
PKGGWE+DETV+EAA REA+EEAGV+G L E PLG+WEFRSKS + L GGC+GYM
Sbjct: 63 PKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYM 122
Query: 118 FSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEE 168
F+LEV EEL IWPEQ++R R+WLN+++A +LCRYEWM+ ALE+F++VM+EE
Sbjct: 123 FALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEE 173
>sp|Q93ZY7|NUD12_ARATH Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12
PE=2 SV=1
Length = 203
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 146/187 (78%), Gaps = 4/187 (2%)
Query: 1 MSV-EARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENE---DTQTRIEVLMVSSPNRSD 56
MSV +RTGR RQRYDNNFRLVSGCIPYRL K E E + D ++EVLMVSSPNR D
Sbjct: 1 MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60
Query: 57 LVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGY 116
LVFPKGGWE+DETV+EAA REA+EEAGV+G L E PLG+WEFRSKS GGC+GY
Sbjct: 61 LVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCKGY 120
Query: 117 MFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQKVEITEE 176
MF+L+VTEELE WPE++NR R+WL +++A +LCRYEWM+ ALE+F++VM +E+++ EE
Sbjct: 121 MFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRALEEFLRVMEDERRLRTEEE 180
Query: 177 IVEPLPK 183
V K
Sbjct: 181 TVHDSSK 187
>sp|Q9LHK1|NUD16_ARATH Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16
PE=2 SV=1
Length = 180
Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 5 ARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGW 64
ARTGRL+QRY++ RLV+GCIP+R +D N ++ I+VLM+SS + L+FPKGGW
Sbjct: 6 ARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLFPKGGW 65
Query: 65 ENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTE 124
ENDETV EAA REA+EEAGVRG L + LG +EF+SKS QD S EG C+ M++L V E
Sbjct: 66 ENDETVREAAAREAVEEAGVRGILMDF-LGNYEFKSKSHQDEFSPEGLCKAAMYALYVKE 124
Query: 125 ELEIWPEQENRYRKWLNIQDAFQLCRYEWMREAL-EKFMKVMSEE--QKVEITEE 176
EL WPE E R RKWL I++A + CR+ WM++AL E F K E+ + EIT E
Sbjct: 125 ELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFCKWHKEKMVKGEEITGE 179
>sp|Q9LE73|NUDT4_ARATH Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1
Length = 207
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 112/165 (67%), Gaps = 10/165 (6%)
Query: 1 MSVEARTGRLRQRYDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVF 59
+S+ +RTGR QRYD+ +R V GC+PYR K E +TQ I+VL+VS+ ++F
Sbjct: 41 VSLVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQ-EVNGVETQV-IQVLLVSAQKGKGMLF 98
Query: 60 PKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFS 119
PKGGWE DE++ EAA RE +EEAGV G+L EK LG W+++SK +H GYMF+
Sbjct: 99 PKGGWETDESMEEAALRETIEEAGVTGELEEK-LGKWQYKSKRHSIIHD------GYMFA 151
Query: 120 LEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKV 164
L V++E E WPE E R R+W+++ +A ++C+ WMREALE F+ +
Sbjct: 152 LLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMREALEAFINL 196
>sp|Q8VY81|NUD21_ARATH Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21
PE=2 SV=1
Length = 198
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 16/164 (9%)
Query: 1 MSVEARTGRLRQRYDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRS-DLV 58
+S+ +RTGR QRY+ +R V GC+PYR K E IEVL++S+ + ++
Sbjct: 42 VSLVSRTGRDLQRYNTAGYRQVVGCVPYRYKKHGGGE-------IEVLLISAQKKGKGML 94
Query: 59 FPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMF 118
PKGGWE DE++ EAA RE +EEAGV G+L E+ LG W+++SK +H G+MF
Sbjct: 95 LPKGGWEIDESIEEAALRETIEEAGVTGQL-EESLGKWQYKSKRHTMIHD------GHMF 147
Query: 119 SLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFM 162
L V+++ EIWPE E R RKW+++ +A +LC+ WMREALE F+
Sbjct: 148 PLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMREALEAFI 191
>sp|Q9LQU5|NUD18_ARATH Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18
PE=2 SV=1
Length = 176
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 102/162 (62%), Gaps = 10/162 (6%)
Query: 5 ARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGW 64
+RTGR QRY+ R V GCIPYRL ++ D EVL++SS L+FPKGGW
Sbjct: 6 SRTGRQSQRYNKGRRQVVGCIPYRLKISSDGTISD---EFEVLVISSQKGHALMFPKGGW 62
Query: 65 ENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTE 124
E DE+V EAA RE+LEEAGV G + E+ LG W+F SKSK + G+MF + V E
Sbjct: 63 ELDESVEEAASRESLEEAGVVGNV-ERQLGKWDFLSKSKGTFYE------GFMFPMLVKE 115
Query: 125 ELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMS 166
ELE+WPEQ R R W+ + +A CR WM+EAL+ ++ +S
Sbjct: 116 ELELWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRLS 157
>sp|Q9ZU95|NUD17_ARATH Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17
PE=2 SV=1
Length = 182
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 106/166 (63%), Gaps = 14/166 (8%)
Query: 3 VEARTGRLRQRYDNNFRLVSGCIPYR--LTKDAEDENEDTQTRIEVLMVSSPNRSDLVFP 60
+ +RTGR QRY+ R V GC+PYR L+ D + +E +EVL++SS L+FP
Sbjct: 9 LASRTGRQFQRYNKGRRQVVGCVPYRFKLSNDGKISDE-----VEVLVISSQKGHALMFP 63
Query: 61 KGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSL 120
KGGWE DE+V EAA RE LEEAGV G + E LG W+F SKS+ + G MF +
Sbjct: 64 KGGWELDESVEEAASRECLEEAGVLGNV-EHQLGKWDFLSKSRGTYYE------GLMFPM 116
Query: 121 EVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMS 166
VTE+LE+WPEQ R R W+N+ +A + CR WM+EAL+ ++ +S
Sbjct: 117 LVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLS 162
>sp|Q5RAF0|NUDT4_PONAB Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Pongo abelii
GN=NUDT4 PE=2 SV=1
Length = 180
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 28/154 (18%)
Query: 14 YDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 12 YDREGFKKRAACLCFR------SEQED-----EVLLVSSSRYPDQWIVPGGGMEPEEEPG 60
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LGI+E + + R Y++ L VTE LE W +
Sbjct: 61 GAAVREVYEEAGVKGKLG-RLLGIFENQDRKH----------RTYVYVLTVTEILEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
N R R+W ++DA ++ C E LEK
Sbjct: 110 SVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEKL 143
>sp|Q9NZJ9|NUDT4_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Homo sapiens
GN=NUDT4 PE=1 SV=2
Length = 180
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 28/154 (18%)
Query: 14 YDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 12 YDREGFKKRAACLCFR------SEQED-----EVLLVSSSRYPDQWIVPGGGMEPEEEPG 60
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LGI+E + + R Y++ L VTE LE W +
Sbjct: 61 GAAVREVYEEAGVKGKLG-RLLGIFENQDRKH----------RTYVYVLTVTEILEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
N R R+W ++DA ++ C E LEK
Sbjct: 110 SVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEKL 143
>sp|Q8R2U6|NUDT4_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Mus musculus
GN=Nudt4 PE=1 SV=1
Length = 179
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 28/154 (18%)
Query: 14 YDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDREGFKKRAACLCFR------SEQED-----EVLLVSSSRYPDQWIVPGGGMEPEEEPG 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LGI+E + + R Y++ L VTE LE W +
Sbjct: 60 GAAVREVYEEAGVKGKLG-RLLGIFENQDRKH----------RTYVYVLTVTEILEDWED 108
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
N R R+W ++DA ++ C E LEK
Sbjct: 109 SVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEKL 142
>sp|P0C028|NUD11_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Mus
musculus GN=Nudt11 PE=1 SV=1
Length = 164
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 14 YD-NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDPEGFKKRAACLCFR------SERED-----EVLLVSSSRYPDRWIVPGGGMEPEEEPD 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LG++E K R Y+F L VTE LE W +
Sbjct: 60 GAAVREVYEEAGVKGKLG-RLLGVFEQNQDRKH---------RTYVFVLTVTELLEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
+ R R+W I+DA ++ C E LEK
Sbjct: 110 SVSIGRKREWFKIEDAIKVLQCHKPVHAEYLEKL 143
>sp|P0C027|NUD10_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 3-alpha OS=Mus
musculus GN=Nudt10 PE=1 SV=1
Length = 164
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 14 YD-NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDPEGFKKRAACLCFR------SERED-----EVLLVSSSRYPDRWIVPGGGMEPEEEPD 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LG++E K R Y+F L VTE LE W +
Sbjct: 60 GAAVREVYEEAGVKGKLG-RLLGVFEQNQDRKH---------RTYVFVLTVTELLEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
+ R R+W I+DA ++ C E LEK
Sbjct: 110 SVSIGRKREWFKIEDAIKVLQCHKPVHAEYLEKL 143
>sp|Q99MY2|NUDT4_RAT Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Rattus
norvegicus GN=Nudt4 PE=2 SV=1
Length = 179
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 28/154 (18%)
Query: 14 YDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDREGFKKRAACLCFR------SEQED-----EVLLVSSSRYPDQWIVPGGGVEPEEEPG 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LGI+E + + R Y++ L VTE LE W +
Sbjct: 60 GAAAREVYEEAGVKGKLG-RLLGIFENQDRKH----------RTYVYVLTVTEILEDWED 108
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
N R R+W ++DA ++ C E LE+
Sbjct: 109 SVNIGRKREWFKVEDAIKVLQCHKPVHAEYLERL 142
>sp|Q8NFP7|NUD10_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 3-alpha OS=Homo
sapiens GN=NUDT10 PE=1 SV=1
Length = 164
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 14 YD-NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDPEGFKKRAACLCFR------SERED-----EVLLVSSSRYPDRWIVPGGGMEPEEEPG 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LG++E K R Y++ L VTE LE W +
Sbjct: 60 GAAVREVYEEAGVKGKLG-RLLGVFEQNQDPKH---------RTYVYVLTVTELLEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
+ R R+W ++DA ++ C E LEK
Sbjct: 110 SVSIGRKREWFKVEDAIKVLQCHKPVHAEYLEKL 143
>sp|Q96G61|NUD11_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Homo
sapiens GN=NUDT11 PE=1 SV=1
Length = 164
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 14 YD-NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDPEGFKKRAACLCFR------SERED-----EVLLVSSSRYPDRWIVPGGGMEPEEEPG 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LG++E K R Y++ L VTE LE W +
Sbjct: 60 GAAVREVYEEAGVKGKLG-RLLGVFEQNQDRKH---------RTYVYVLTVTELLEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
+ R R+W ++DA ++ C E LEK
Sbjct: 110 SVSIGRKREWFKVEDAIKVLQCHKPVHAEYLEKL 143
>sp|O95989|NUDT3_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Homo sapiens
GN=NUDT3 PE=1 SV=1
Length = 172
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 45 EVLMVSSPNRSDL-VFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSK 103
EVL+VSS D + P GG E +E AA RE EEAGV+G L + +GI+E + +
Sbjct: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLVGIFENQERKH 91
Query: 104 QDLHSLEGGCRGYMFSLEVTEELEIWPEQEN--RYRKWLNIQDAFQLCRY 151
R Y++ L VTE LE W + N R R+W I+DA ++ +Y
Sbjct: 92 ----------RTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 131
>sp|Q58CW0|NUD11_BOVIN Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Bos
taurus GN=NUDT11 PE=2 SV=2
Length = 164
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 14 YD-NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDL-VFPKGGWENDETVM 71
YD F+ + C+ +R E ED EVL+VSS D + P GG E +E
Sbjct: 11 YDPEGFKKRAACLCFR------SERED-----EVLLVSSSRYPDRWIVPGGGMEPEEEPG 59
Query: 72 EAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE 131
AA RE EEAGV+GKL + LG +E K R Y++ L VTE LE W +
Sbjct: 60 GAAVREVFEEAGVKGKLG-RLLGNFEQNQDRKH---------RTYVYVLTVTEILEDWED 109
Query: 132 QEN--RYRKWLNIQDAFQL--CRYEWMREALEKF 161
+ R R+W ++DA ++ C E L+K
Sbjct: 110 SVSIGRKREWFKVEDAIKVLQCHKPVHAEYLQKL 143
>sp|Q9JI46|NUDT3_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus
GN=Nudt3 PE=1 SV=1
Length = 168
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 45 EVLMVSSPNRSDL-VFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSK 103
EVL+VSS D + P GG E +E AA RE EEAGV+G L + +GI+E + +
Sbjct: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLVGIFENQERKH 91
Query: 104 QDLHSLEGGCRGYMFSLEVTEELEIWPEQEN--RYRKWLNIQDAFQL 148
R Y++ L VTE LE W + N R R+W I+DA ++
Sbjct: 92 ----------RTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKV 128
>sp|Q566C7|NUDT3_RAT Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus
norvegicus GN=Nudt3 PE=1 SV=1
Length = 168
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 45 EVLMVSSPNRSDL-VFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSK 103
EVL+VSS D + P GG E +E AA RE EEAGV+G L + +GI+E + +
Sbjct: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLVGIFENQERKH 91
Query: 104 QDLHSLEGGCRGYMFSLEVTEELEIWPEQEN--RYRKWLNIQDAFQLCRY 151
R Y++ L VTE LE W + N R R+W I++A ++ +Y
Sbjct: 92 ----------RTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEEAVKVLQY 131
>sp|A2VE79|NUDT3_BOVIN Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Bos taurus
GN=NUDT3 PE=2 SV=1
Length = 172
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 45 EVLMVSSPNRSDL-VFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSK 103
EVL+VSS D + P GG E +E AA RE EEAGV+G L + +GI+E + +
Sbjct: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPGTAAVREVCEEAGVKGTLG-RLVGIFENQERKH 91
Query: 104 QDLHSLEGGCRGYMFSLEVTEELEIWPEQEN--RYRKWLNIQDAFQL 148
R Y++ L VTE LE W + + R R+W I+DA +
Sbjct: 92 ----------RTYVYVLIVTEVLEDWEDSVSIGRKREWFKIEDAINV 128
>sp|Q09790|APS1_SCHPO Diphosphoinositol polyphosphate phosphohydrolase aps1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=aps1 PE=1 SV=1
Length = 210
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 57/209 (27%)
Query: 2 SVEARTGRLRQRYD--NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRS-DLV 58
S+ +R GR + R++ RL +G + L+ D + +VL+VSS + V
Sbjct: 23 SMTSREGRTKNRFNPITGARLAAGVVA--LSAD----------KRKVLLVSSAKKHPSWV 70
Query: 59 FPKGGWENDETVMEAACREALEEAGVRGKL--------NEKPLGIWEFRSKSKQDLHSLE 110
PKGGWE DE+V +AA RE EE G+ G + +++P + R K + L S
Sbjct: 71 VPKGGWEADESVQQAALREGWEEGGLVGHITRSLGSFKDKRPTDTIDRRKKYLKQLMSKS 130
Query: 111 GG-----------------------CRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQ 147
G C + +E E + +PE R RKW++ Q+A
Sbjct: 131 SGNDVSTNTELGAEAEKLLLPPRAECEFFEVIVERLE--DNYPEMRKRRRKWMSYQEA-- 186
Query: 148 LCRYEWMREALEKFMKVMSEEQKVEITEE 176
+EAL +++ +K I +E
Sbjct: 187 -------KEALTSRKDILAALEKSSIIKE 208
>sp|Q99321|DDP1_YEAST Diphosphoinositol polyphosphate phosphohydrolase DDP1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=DDP1 PE=1 SV=3
Length = 188
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 5 ARTGRLRQRYD--NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMV-SSPNRSDLVFPK 61
AR GR Q Y RLV+GCI LT D + +VLM+ SS ++ + PK
Sbjct: 16 AREGRENQVYSPVTGARLVAGCIC--LTPD----------KKQVLMITSSAHKKRWIVPK 63
Query: 62 GGWENDETVME-AACREALEEAGVRGKL--------NEKPLGIWEFRSK----SKQDLHS 108
GG E DE E A RE EEAG GK+ + +P W K S++D
Sbjct: 64 GGVEKDEPNYETTAQRETWEEAGCIGKIVANLGTVEDMRPPKDWNKDIKQFENSRKDSEV 123
Query: 109 LEGGCRG--YMFSLEVTEELEIWPEQENRYRKWLNIQDAFQ 147
+ R + + LE+ L+ +PE R+RK + +A Q
Sbjct: 124 AKHPPRTEFHFYELEIENLLDKFPECHKRHRKLYSYTEAKQ 164
>sp|P95110|MUTT1_MYCTU Probable 8-oxo-dGTP diphosphatase 1 OS=Mycobacterium tuberculosis
GN=mutT1 PE=3 SV=2
Length = 317
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 23/168 (13%)
Query: 11 RQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETV 70
R+R +G + +R + D++ +E+ ++ P D PKG + ET
Sbjct: 9 RRRSAGRIVYAAGAVLWR------PGSADSEGPVEIAVIHRPRYDDWSLPKGKVDPGETA 62
Query: 71 MEAACREALEEAGVRGKLNEKPLGIW-----EFRSKSKQDLHSLEGGCRGYMFSLEVTEE 125
A RE LEE G R L + L + FR K +H G F+
Sbjct: 63 PVGAVREILEETGHRANLGRRLLTVTYPTDSPFRGVKK--VHYWAARSTGGEFT------ 114
Query: 126 LEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQKVEI 173
P E WL + DA Y R+ L +F K ++ Q V +
Sbjct: 115 ----PGSEVDELIWLPVPDAMNKLDYAQDRKVLCRFAKHPADTQTVLV 158
>sp|Q29RJ1|AP4A_BOVIN Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Bos taurus
GN=NUDT2 PE=2 SV=3
Length = 147
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 19/127 (14%)
Query: 42 TRIEVLMV-SSPNRSDLVFPKGGWENDETVMEAACREALEEAGVR-GKLN-----EKPLG 94
T IE L++ +S PKG E E+ +E A RE EEAG+ G+L + L
Sbjct: 22 TAIEFLLLQASDGIHHWTPPKGHVEPGESDLETALRETQEEAGIEAGQLTIIEGFRRELS 81
Query: 95 IWEFRSKSKQDLHSLEGGCRGYMFSLEVTE-ELEIWPEQENRYRKWLNIQDAFQLCRYEW 153
+ R+K K ++ L EV + ++E+ +E++ +WL ++DA QL ++E
Sbjct: 82 -YVARAKPKIVIYWLA----------EVKDCDVEVRLSREHQAYRWLELEDACQLAQFEE 130
Query: 154 MREALEK 160
M+ AL++
Sbjct: 131 MKAALQE 137
>sp|Q17VH2|RPPH_HELAH RNA pyrophosphohydrolase OS=Helicobacter acinonychis (strain
Sheeba) GN=rppH PE=3 SV=1
Length = 157
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +EA RE LEE G L + P I ++F S + + +S +G +
Sbjct: 39 FPQGGIDEGETPLEALYRELLEEIGTNEIEVLAQYPRWIAYDFPSNMEHNFYSFDGQKQR 98
Query: 116 YM 117
Y
Sbjct: 99 YF 100
>sp|Q91FB1|VF414_IIV6 Putative hydrolase 414L OS=Invertebrate iridescent virus 6
GN=IIV6-414L PE=3 SV=1
Length = 192
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 35 DENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVR 85
DEN D + +L+ S N V PKG E++ET++E A RE +EE+G++
Sbjct: 61 DENMDKK----ILITQSYNNLWGV-PKGKKESNETLLECASREVVEESGIK 106
>sp|A4FUG7|NUD17_BOVIN Nucleoside diphosphate-linked moiety X motif 17 OS=Bos taurus
GN=NUDT17 PE=2 SV=1
Length = 302
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 58 VFPKGGWENDETVMEAACREALEEAGV---RGKLNEKPLGIWEFRSKSKQDLHSLEGGCR 114
V P G E DE +++ RE EE+G+ +G+ + PLG+WE K L G
Sbjct: 124 VPPGGHVEPDEELLDGGLRELWEESGLQLPQGQFSWVPLGLWESAYPPK-----LSWGLP 178
Query: 115 GY----MFSLEVTEELEIWPEQENRYRKWLNIQ-DAFQLCRYEWMREALEKFMKVMSEEQ 169
Y ++ L ++ QE++ + IQ +A ++ + W+ + V + E
Sbjct: 179 KYHHIVLYLLVIS--------QESQQQLQARIQPNAGEVSAFMWLGPDIAA--AVAATED 228
Query: 170 KVEITEEIVEPLPKPVPDV 188
E + + + LP VP V
Sbjct: 229 GTETPKHLPQDLPSSVPTV 247
>sp|O25826|RPPH_HELPY RNA pyrophosphohydrolase OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=rppH PE=3 SV=1
Length = 155
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEG-GCR 114
FP+GG + ET +EA RE LEE G L + P I ++F S + +S +G R
Sbjct: 39 FPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYSFDGQKQR 98
Query: 115 GYMFSLEVTEELEI 128
++ L+ T +++
Sbjct: 99 YFLVRLKHTNNIDL 112
>sp|Q9ZJZ8|RPPH_HELPJ RNA pyrophosphohydrolase OS=Helicobacter pylori (strain J99)
GN=rppH PE=3 SV=1
Length = 157
Score = 33.9 bits (76), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +EA RE LEE G L + P I ++F S + +S +G +
Sbjct: 39 FPQGGIDEGETPLEALYRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYSFDGQKQR 98
Query: 116 YM 117
Y
Sbjct: 99 YF 100
>sp|Q1GE19|TOLB_RUEST Protein TolB OS=Ruegeria sp. (strain TM1040) GN=tolB PE=3 SV=1
Length = 441
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 170 KVEITEEIVEPLPKPVPDVIAEC 192
++EIT+ ++EPLP VPD IA+
Sbjct: 29 RIEITDGVIEPLPFAVPDFIADT 51
>sp|O06972|YVCI_BACSU Uncharacterized Nudix hydrolase YvcI OS=Bacillus subtilis (strain
168) GN=yvcI PE=3 SV=1
Length = 158
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 41 QTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRS 100
QT +VL++ P R V P G E+ E+V ++ RE EE G+ +N + G++ F
Sbjct: 13 QTDDKVLLLQKPRRGWWVAPGGKMESGESVRDSVIREYREETGIY-IINPQLKGVFTFII 71
Query: 101 KSKQDLHS 108
K + S
Sbjct: 72 KDGDHIVS 79
>sp|Q3J041|TOLB_RHOS4 Protein TolB OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1
/ NCIB 8253 / DSM 158) GN=tolB PE=3 SV=1
Length = 444
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 170 KVEITEEIVEPLPKPVPDVIAE 191
+++ITE ++EPLP VPD +AE
Sbjct: 32 RIQITEGVIEPLPFAVPDFVAE 53
>sp|A3PM58|TOLB_RHOS1 Protein TolB OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=tolB PE=3 SV=1
Length = 444
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 170 KVEITEEIVEPLPKPVPDVIAE 191
+++ITE ++EPLP VPD +AE
Sbjct: 32 RIQITEGVIEPLPFAVPDFVAE 53
>sp|B2UUZ0|RPPH_HELPS RNA pyrophosphohydrolase OS=Helicobacter pylori (strain Shi470)
GN=rppH PE=3 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +EA RE LEE G L + P I ++F S + +S +G +
Sbjct: 39 FPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYSFDGQKQR 98
Query: 116 YM 117
Y
Sbjct: 99 YF 100
>sp|O45830|NDX1_CAEEL Putative nudix hydrolase 1 OS=Caenorhabditis elegans GN=ndx-1 PE=3
SV=1
Length = 365
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 26/136 (19%)
Query: 13 RYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRS---DLVFPKGGWENDET 69
R +N V+ I R ++ +DT EVL++ +S P G E ET
Sbjct: 67 RLHDNVNYVAAAIILR------NQGDDT----EVLLIQEAKKSCRGKWYMPAGRVEAGET 116
Query: 70 VMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVT-EELEI 128
+ EA RE EE G + E S Q G Y F +T +L+
Sbjct: 117 IEEAVVREVKEETGYS-------CDVVELLSLQVQG-----SGWYRYAFYCNITGGDLKT 164
Query: 129 WPEQENRYRKWLNIQD 144
P+QE+ +W NI+D
Sbjct: 165 EPDQESLAAEWYNIKD 180
>sp|Q60282|Y3523_METJA Uncharacterized protein MJECL23 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJECL23 PE=4 SV=1
Length = 827
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 95 IWEFRSKSKQDLHSLE-------GGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQ 147
+WEF++KS + + +L GC Y+++L++ E+W + K L+I+
Sbjct: 622 LWEFKAKSGKSIRNLSIKNDILLFGCDNYLYALDIDTGRELWRFKAEGEVKSLSIKKDNV 681
Query: 148 L--CRYEWMR-------EALEKFMKVMSEEQKVEITEEIV 178
L CR ++ E +E+F KV+ ++ I ++IV
Sbjct: 682 LLGCRGGYVYLLDINTGEKMERF-KVVGSVLRLSIKDDIV 720
>sp|P35640|RPPH_BARBK RNA pyrophosphohydrolase OS=Bartonella bacilliformis (strain ATCC
35685 / KC583) GN=rppH PE=1 SV=1
Length = 170
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Query: 24 CIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLV-----FPKGGWENDETVMEAACREA 78
+PYR N + Q I +++S + V FP+GG + E ++AA RE
Sbjct: 9 TLPYRKGVGIVVFNREGQVWIGRRLITSSHTYAEVSKLWQFPQGGIDEGEEPLDAARREL 68
Query: 79 LEEAGVRGKLNEKPLGIWEFRSKSKQDL--HSLEGGCRGYM-------FSLEVTEELEIW 129
EE G+R K + W F Q+L H L RG M F E +E +
Sbjct: 69 YEETGMRSVNLIKEVQDW-FCYDFPQELIGHVLNNQYRGQMQKWFAFQFIGETSEIVINS 127
Query: 130 PEQENRYR----KWLNIQ 143
PE N+ KW+N++
Sbjct: 128 PENSNKAEFDQWKWINLE 145
>sp|P50583|AP4A_HUMAN Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Homo sapiens
GN=NUDT2 PE=1 SV=3
Length = 147
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 46 VLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVR-GKLN-----EKPLGIWEFR 99
+L+ +S PKG E E +E A RE EEAG+ G+L ++ L + R
Sbjct: 27 LLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELN-YVAR 85
Query: 100 SKSKQDLHSLEGGCRGYMFSLEVTE-ELEIWPEQENRYRKWLNIQDAFQLCRYEWMREAL 158
+K K ++ L EV + ++EI E++ +WL +++A QL +++ M+ AL
Sbjct: 86 NKPKTVIYWLA----------EVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAAL 135
Query: 159 EK 160
++
Sbjct: 136 QE 137
>sp|B6JN68|RPPH_HELP2 RNA pyrophosphohydrolase OS=Helicobacter pylori (strain P12)
GN=rppH PE=3 SV=1
Length = 155
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +EA RE LEE G L + P I ++F S + ++ +G +
Sbjct: 39 FPQGGIDEGETPLEALYRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYAFDGQKQR 98
Query: 116 YM 117
Y
Sbjct: 99 YF 100
>sp|B2SFE8|RPPH_FRATM RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=rppH PE=3 SV=1
Length = 155
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 53 NRSDLVFPKGGWENDETVMEAACREALEEAGVR 85
NR+ FP+GG + ET ++A RE EE G+R
Sbjct: 29 NRTSWQFPQGGVDTGETPLQAMYRELHEEIGLR 61
>sp|B5Z8M3|RPPH_HELPG RNA pyrophosphohydrolase OS=Helicobacter pylori (strain G27)
GN=rppH PE=3 SV=1
Length = 155
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +EA RE LEE G L + P I ++F S + ++ +G +
Sbjct: 39 FPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYAFDGQKQR 98
Query: 116 YM 117
Y
Sbjct: 99 YF 100
>sp|Q1CS35|RPPH_HELPH RNA pyrophosphohydrolase OS=Helicobacter pylori (strain HPAG1)
GN=rppH PE=3 SV=1
Length = 155
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR--GKLNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +EA RE LEE G L + P I ++F S + ++ +G +
Sbjct: 39 FPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYAFDGQKQR 98
Query: 116 YM 117
Y
Sbjct: 99 YF 100
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 27 YRLTKDAEDENEDTQTRI-----EVLMVSSPNRSDLVFPKGGWENDETVMEAACREALE- 80
+ +TK + N D + E +SP S +V PKG + ++ +E C+ LE
Sbjct: 27 FDITKYGANSNADISEALLNAFKEACQSTSP--STIVIPKGTFTMNQVKLEGPCKSPLEL 84
Query: 81 --EAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGG 112
+A ++ + L + E+ + +K D ++ GG
Sbjct: 85 QIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGG 118
>sp|Q6PEC0|AP4A_RAT Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus
norvegicus GN=Nudt2 PE=2 SV=3
Length = 147
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 42 TRIEVLMV-SSPNRSDLVFPKGGWENDETVMEAACREALEEAGV-----------RGKLN 89
T IE L++ +S PKG + E +E A RE EE G+ R +LN
Sbjct: 22 TTIEFLLLQASDGIHHWTPPKGHVDPGENDLETALRETQEETGIEASQLIVLEGFRRELN 81
Query: 90 EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC 149
+ R K K ++ L + Y ++EI QE++ +WL + +A QL
Sbjct: 82 ------YVARKKPKTVIYWL-AEVKDY--------DVEIRLSQEHQAYRWLGLDEACQLA 126
Query: 150 RYEWMREALEK 160
++E M+ L++
Sbjct: 127 QFEEMKATLQE 137
>sp|Q92LA8|RPPH_RHIME RNA pyrophosphohydrolase OS=Rhizobium meliloti (strain 1021)
GN=rppH PE=3 SV=1
Length = 167
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVR 85
P+GG + E +EAACRE EE G+R
Sbjct: 45 MPQGGIDEGEDPLEAACRELYEETGIR 71
>sp|A6Q7F6|RPPH_SULNB RNA pyrophosphohydrolase OS=Sulfurovum sp. (strain NBC37-1) GN=rppH
PE=3 SV=1
Length = 157
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 59 FPKGGWENDETVMEAACREALEEAGVRGK--LNEKPLGI-WEFRSKSKQDLHSLEGGCRG 115
FP+GG + ET +A RE LEE G L E P I ++F ++ ++ +G +
Sbjct: 40 FPQGGIDEGETPEDALYRELLEEIGCNNVEILGEFPEWITYDFPKTARGKVYPFDGQTQK 99
Query: 116 YMFSLEVTEELEI 128
Y F + + EE +I
Sbjct: 100 Y-FLVRLKEEAQI 111
>sp|A8LHQ6|TOLB_DINSH Protein TolB OS=Dinoroseobacter shibae (strain DFL 12) GN=tolB PE=3
SV=1
Length = 446
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 170 KVEITEEIVEPLPKPVPDVIAECQIVS 196
++EITE ++EPLP VP +AE S
Sbjct: 32 RIEITEGVIEPLPIAVPPFLAETPAAS 58
>sp|A4IWB3|RPPH_FRATW RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=rppH PE=3 SV=1
Length = 155
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 53 NRSDLVFPKGGWENDETVMEAACREALEEAGVR 85
NR+ FP+GG ET ++A RE EE G+R
Sbjct: 29 NRTSWQFPQGGVATGETPLQAMYRELHEEIGLR 61
>sp|Q5NIB6|RPPH_FRATT RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=rppH PE=3 SV=1
Length = 155
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 53 NRSDLVFPKGGWENDETVMEAACREALEEAGVR 85
NR+ FP+GG ET ++A RE EE G+R
Sbjct: 29 NRTSWQFPQGGVATGETPLQAMYRELHEEIGLR 61
>sp|Q0BKE0|RPPH_FRATO RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=rppH PE=3 SV=1
Length = 155
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 53 NRSDLVFPKGGWENDETVMEAACREALEEAGVR 85
NR+ FP+GG ET ++A RE EE G+R
Sbjct: 29 NRTSWQFPQGGVATGETPLQAMYRELHEEIGLR 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,086,160
Number of Sequences: 539616
Number of extensions: 3442740
Number of successful extensions: 11407
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 11282
Number of HSP's gapped (non-prelim): 129
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)