Query 027123
Match_columns 228
No_of_seqs 178 out of 1400
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:17:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 1.6E-25 5.5E-30 172.1 16.2 128 19-167 4-131 (134)
2 3gz5_A MUTT/nudix family prote 99.9 9.2E-25 3.2E-29 183.8 11.2 167 17-204 20-191 (240)
3 3u53_A BIS(5'-nucleosyl)-tetra 99.9 2.4E-23 8.1E-28 163.1 15.6 141 20-169 4-146 (155)
4 2fb1_A Conserved hypothetical 99.9 2.4E-24 8.2E-29 179.7 8.9 166 17-205 11-179 (226)
5 1vcd_A NDX1; nudix protein, di 99.9 6.9E-22 2.3E-26 148.6 16.7 124 18-165 1-124 (126)
6 1ktg_A Diadenosine tetraphosph 99.9 9.7E-22 3.3E-26 150.0 17.2 130 19-166 3-136 (138)
7 2pbt_A AP4A hydrolase; nudix p 99.9 7.6E-22 2.6E-26 149.7 16.3 128 19-167 4-131 (134)
8 2fml_A MUTT/nudix family prote 99.9 2.6E-22 8.9E-27 171.8 15.0 166 16-200 36-228 (273)
9 3son_A Hypothetical nudix hydr 99.9 1.4E-21 4.8E-26 151.4 17.0 137 20-168 6-144 (149)
10 3i9x_A MUTT/nudix family prote 99.9 2.9E-22 9.8E-27 161.7 8.8 137 16-169 24-176 (187)
11 3fk9_A Mutator MUTT protein; s 99.9 8E-22 2.7E-26 159.7 11.0 156 18-193 3-161 (188)
12 3gg6_A Nudix motif 18, nucleos 99.9 3.6E-21 1.2E-25 150.3 13.4 131 13-168 14-150 (156)
13 3fcm_A Hydrolase, nudix family 99.9 8.3E-21 2.9E-25 154.4 15.6 143 16-170 42-189 (197)
14 3grn_A MUTT related protein; s 99.9 3.7E-20 1.3E-24 144.1 17.0 127 17-166 6-138 (153)
15 2azw_A MUTT/nudix family prote 99.9 2.6E-20 8.7E-25 143.6 15.8 139 6-162 5-144 (148)
16 3f6a_A Hydrolase, nudix family 99.8 2.5E-20 8.7E-25 146.1 13.8 133 18-165 5-151 (159)
17 3fjy_A Probable MUTT1 protein; 99.8 3E-20 1E-24 164.8 14.9 150 19-169 3-179 (364)
18 2o1c_A DATP pyrophosphohydrola 99.8 3.9E-20 1.3E-24 142.5 13.4 133 20-165 10-149 (150)
19 3q1p_A Phosphohydrolase (MUTT/ 99.8 3E-20 1E-24 152.4 13.0 133 17-168 66-198 (205)
20 2fvv_A Diphosphoinositol polyp 99.8 1.4E-20 4.8E-25 153.3 10.6 150 16-194 37-189 (194)
21 3gwy_A Putative CTP pyrophosph 99.8 1.1E-19 3.9E-24 139.3 14.9 121 19-164 6-132 (140)
22 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 1.5E-19 5E-24 138.4 14.9 127 16-163 6-136 (139)
23 4dyw_A MUTT/nudix family prote 99.8 1.3E-19 4.3E-24 142.1 14.1 123 17-161 27-153 (157)
24 1k2e_A Nudix homolog; nudix/MU 99.8 1.5E-19 5.2E-24 141.4 14.2 128 20-169 2-140 (156)
25 2b0v_A Nudix hydrolase; struct 99.8 3.3E-19 1.1E-23 138.2 16.0 111 45-162 20-137 (153)
26 1rya_A GDP-mannose mannosyl hy 99.8 1.7E-19 5.7E-24 140.9 14.4 131 17-160 16-151 (160)
27 3shd_A Phosphatase NUDJ; nudix 99.8 2.6E-19 9E-24 139.0 14.9 124 18-163 4-132 (153)
28 3ees_A Probable pyrophosphohyd 99.8 3.3E-19 1.1E-23 137.9 15.0 111 45-166 34-148 (153)
29 3id9_A MUTT/nudix family prote 99.8 2E-19 6.8E-24 142.5 13.5 124 16-162 20-149 (171)
30 3cng_A Nudix hydrolase; struct 99.8 7.2E-19 2.5E-23 142.1 16.7 125 17-167 38-166 (189)
31 3o8s_A Nudix hydrolase, ADP-ri 99.8 1.6E-19 5.5E-24 148.1 12.7 132 17-168 68-199 (206)
32 3hhj_A Mutator MUTT protein; n 99.8 2.7E-19 9.2E-24 139.9 13.1 125 17-164 27-156 (158)
33 3eds_A MUTT/nudix family prote 99.8 3E-20 1E-24 145.0 7.6 118 18-150 20-137 (153)
34 3q93_A 7,8-dihydro-8-oxoguanin 99.8 5.4E-19 1.8E-23 141.4 14.1 110 45-163 37-149 (176)
35 1sjy_A MUTT/nudix family prote 99.8 6.2E-19 2.1E-23 137.5 14.0 115 17-152 11-134 (159)
36 2kdv_A RNA pyrophosphohydrolas 99.8 1.5E-18 5E-23 137.4 16.2 135 17-166 6-152 (164)
37 3r03_A Nudix hydrolase; struct 99.8 4.5E-19 1.5E-23 136.0 12.9 127 18-167 7-138 (144)
38 3oga_A Nucleoside triphosphata 99.8 1E-18 3.5E-23 137.6 14.8 112 45-161 40-162 (165)
39 3f13_A Putative nudix hydrolas 99.8 5.5E-19 1.9E-23 140.0 13.3 106 45-167 28-133 (163)
40 3exq_A Nudix family hydrolase; 99.8 5.2E-19 1.8E-23 139.2 12.3 126 17-163 8-136 (161)
41 2rrk_A ORF135, CTP pyrophospho 99.8 1.7E-18 5.9E-23 132.0 14.8 109 45-164 21-133 (140)
42 2b06_A MUTT/nudix family prote 99.8 2.1E-18 7.1E-23 134.2 14.6 127 17-163 6-134 (155)
43 3h95_A Nucleoside diphosphate- 99.8 3.3E-18 1.1E-22 139.3 16.3 148 17-197 24-177 (199)
44 2fkb_A Putative nudix hydrolas 99.8 4E-18 1.4E-22 136.0 16.3 126 18-166 36-169 (180)
45 2pqv_A MUTT/nudix family prote 99.8 6.4E-19 2.2E-23 137.1 11.2 115 17-152 17-133 (154)
46 1f3y_A Diadenosine 5',5'''-P1, 99.8 1.4E-18 4.6E-23 136.0 12.5 138 16-167 11-163 (165)
47 1hzt_A Isopentenyl diphosphate 99.8 3E-18 1E-22 138.3 12.2 131 18-165 31-173 (190)
48 2qjo_A Bifunctional NMN adenyl 99.8 3.2E-18 1.1E-22 149.5 13.0 129 17-164 201-340 (341)
49 2w4e_A MUTT/nudix family prote 99.8 6.3E-18 2.2E-22 130.7 13.1 111 19-151 5-120 (145)
50 2jvb_A Protein PSU1, mRNA-deca 99.8 1.3E-18 4.3E-23 134.1 8.5 111 21-153 6-119 (146)
51 1mut_A MUTT, nucleoside tripho 99.8 6.8E-19 2.3E-23 132.3 6.3 106 45-161 17-126 (129)
52 2qjt_B Nicotinamide-nucleotide 99.8 1E-17 3.6E-22 147.1 14.5 130 17-165 206-348 (352)
53 1vk6_A NADH pyrophosphatase; 1 99.7 2.4E-17 8.2E-22 140.7 14.0 113 45-168 152-267 (269)
54 1q33_A Pyrophosphatase, ADP-ri 99.7 3.1E-17 1E-21 141.6 14.6 145 18-166 109-278 (292)
55 2yvp_A NDX2, MUTT/nudix family 99.7 4.5E-18 1.5E-22 136.1 8.6 123 8-152 29-158 (182)
56 1q27_A Putative nudix hydrolas 99.7 2.5E-17 8.5E-22 130.3 10.7 125 19-165 34-167 (171)
57 1nqz_A COA pyrophosphatase (MU 99.7 1.7E-17 5.7E-22 134.2 9.8 116 16-151 31-154 (194)
58 1v8y_A ADP-ribose pyrophosphat 99.7 2.3E-17 8E-22 130.7 10.3 111 18-152 33-148 (170)
59 1mk1_A ADPR pyrophosphatase; n 99.7 1.9E-17 6.6E-22 135.7 8.9 123 8-152 32-162 (207)
60 3e57_A Uncharacterized protein 99.7 6.5E-17 2.2E-21 133.1 11.6 113 14-148 62-188 (211)
61 1vhz_A ADP compounds hydrolase 99.7 1.3E-16 4.3E-21 130.1 13.0 100 45-153 61-165 (198)
62 1x51_A A/G-specific adenine DN 99.7 9.6E-17 3.3E-21 125.0 11.7 125 18-163 18-148 (155)
63 3o6z_A GDP-mannose pyrophospha 99.7 1.5E-16 5.2E-21 128.8 10.9 110 20-151 46-169 (191)
64 3q91_A Uridine diphosphate glu 99.7 1.9E-16 6.3E-21 131.3 11.2 125 7-152 24-192 (218)
65 2a6t_A SPAC19A8.12; alpha/beta 99.7 2.2E-16 7.7E-21 134.8 11.7 110 20-151 102-215 (271)
66 1g0s_A Hypothetical 23.7 kDa p 99.7 2.4E-16 8.3E-21 129.5 10.2 112 19-151 57-182 (209)
67 2dsc_A ADP-sugar pyrophosphata 99.6 7.1E-16 2.4E-20 126.8 11.0 113 20-150 62-185 (212)
68 3fsp_A A/G-specific adenine gl 99.6 8.4E-15 2.9E-19 130.2 14.1 107 45-166 253-363 (369)
69 1u20_A U8 snoRNA-binding prote 99.6 7.4E-15 2.5E-19 120.9 9.7 121 16-148 30-165 (212)
70 2dho_A Isopentenyl-diphosphate 99.6 7.7E-14 2.6E-18 116.7 14.5 135 18-169 58-220 (235)
71 2pny_A Isopentenyl-diphosphate 99.5 1.1E-13 3.9E-18 116.4 13.8 135 18-169 69-231 (246)
72 3qsj_A Nudix hydrolase; struct 99.5 2.9E-13 1E-17 113.0 14.6 117 17-147 6-187 (232)
73 3dup_A MUTT/nudix family prote 99.5 1E-12 3.4E-17 113.5 13.9 133 17-163 116-262 (300)
74 3rh7_A Hypothetical oxidoreduc 99.4 6.1E-13 2.1E-17 116.0 9.9 115 18-169 182-298 (321)
75 2xsq_A U8 snoRNA-decapping enz 99.4 9.1E-13 3.1E-17 108.9 8.7 95 45-147 66-172 (217)
76 3bho_A Cleavage and polyadenyl 99.2 1.5E-11 5E-16 99.7 8.0 129 3-145 41-182 (208)
77 3kvh_A Protein syndesmos; NUDT 99.0 2.6E-10 8.8E-15 91.6 5.6 96 16-124 18-115 (214)
78 2x5c_A Hypothetical protein OR 37.9 50 0.0017 22.9 4.4 23 42-64 71-93 (131)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.94 E-value=1.6e-25 Score=172.10 Aligned_cols=128 Identities=27% Similarity=0.384 Sum_probs=99.7
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEE
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEF 98 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~ 98 (228)
..+||||+++.+ +|||++++. +.|.||||++++|||+.+||+||++||||+.+.... .++.+.+
T Consensus 4 ~~aag~vv~~~~--------------~vLL~~r~~-g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~-~l~~~~~ 67 (134)
T 3i7u_A 4 EFSAGGVLFKDG--------------EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILD-YIGEIHY 67 (134)
T ss_dssp EEEEEEEEEETT--------------EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEEEEE
T ss_pred EEEEEEEEEECC--------------EEEEEEeCC-CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEee-eeeeeeE
Confidence 458899999753 799998765 789999999999999999999999999999987763 5666554
Q ss_pred eeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhh
Q 027123 99 RSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSE 167 (228)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~ 167 (228)
....... .....+++|.+...+... .++.|+.+++|++++++.+++.+++++.+++++++.+.+
T Consensus 68 ~~~~~~~----~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l~~k 131 (134)
T 3i7u_A 68 WYTLKGE----RIFKTVKYYLMKYKEGEP-RPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEEETTE----EEEEEEEEEEEEEEEECC-CCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHHHHH
T ss_pred EecCCCc----eEEEEEEEEEEEEcCCcC-cCChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHHHHc
Confidence 4332211 112345677777655433 356789999999999999999999999999998876543
No 2
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.91 E-value=9.2e-25 Score=183.78 Aligned_cols=167 Identities=15% Similarity=0.110 Sum_probs=128.7
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCC--CCCHHHHHHHHHHHHhceeeeeccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWEN--DETVMEAACREALEEAGVRGKLNEK 91 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~--gEt~~eAA~REl~EETGl~~~~~~~ 91 (228)
....+|+|||+...+ +.++|||+++.. .+.|.||||+++. |||+++||+||++||||+.+...+
T Consensus 20 ~p~v~v~~vi~~~~~----------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~- 88 (240)
T 3gz5_A 20 AQLLTVDAVLFTYHD----------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIE- 88 (240)
T ss_dssp -CEEEEEEEEEEEET----------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEE-
T ss_pred CCccEEEEEEEEEeC----------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCcee-
Confidence 456789999997765 567999999875 4779999999999 999999999999999999987774
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhcccc
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQKV 171 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~~~~ 171 (228)
.++++....+.... .....+|.+.+..........++.+++|+++++++......+|+.++..++++++...
T Consensus 89 ~l~~~~~~~r~~~~------~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl-- 160 (240)
T 3gz5_A 89 QLCTVGNNSRDARG------WSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKA-- 160 (240)
T ss_dssp EEEEEEESSSSTTS------CEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHH--
T ss_pred eEEEeCCCccCCCc------eEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhc--
Confidence 47777765443221 2344556665554322223567889999999999875555589999999999999887
Q ss_pred ccceeeecCCCCCCCCccccccccccCeeeecC
Q 027123 172 EITEEIVEPLPKPVPDVIAECQIVSSNYCVTTT 204 (228)
Q Consensus 172 ~~~~~~v~~~~lp~~~~~~e~~~~~~~~~~~~~ 204 (228)
...++.+.++|..||+.++|.+=-..+.++.
T Consensus 161 --~y~~i~~~llp~~Ftl~~l~~~ye~i~g~~~ 191 (240)
T 3gz5_A 161 --LYSLVPGFALSEPFTLPELQHVHEVLLGKPI 191 (240)
T ss_dssp --HHCSGGGGGSCSSBCHHHHHHHHHHHHTSCC
T ss_pred --ccCcHHHHhCCCCccHHHHHHHHHHHcCCcC
Confidence 7788999999999999999986544443333
No 3
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.91 E-value=2.4e-23 Score=163.07 Aligned_cols=141 Identities=23% Similarity=0.281 Sum_probs=100.8
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEE
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEF 98 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~ 98 (228)
.++|+|+|+... .....+++.+|||++++. .+.|.||||++++|||+.+||+||++||||+.+.... .++.+.+
T Consensus 4 ra~G~iifr~~~----~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~-~~~~~~~ 78 (155)
T 3u53_A 4 RACGLIIFRRCL----IPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLT-IIEGFKR 78 (155)
T ss_dssp CEEEEEEEEECC----CSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEE-EEEEEEE
T ss_pred eEeEEEEEcccc----ccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccce-eeeeEee
Confidence 378999998531 111224678999999876 4679999999999999999999999999999876542 3444432
Q ss_pred eeCCcccCCCCCCcEEEEEEEEEeCcc-ccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhcc
Q 027123 99 RSKSKQDLHSLEGGCRGYMFSLEVTEE-LEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQ 169 (228)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~~ 169 (228)
....... .......+|.+.+... ....++.|+.+++|++++|+.+++.+++.+.+|.++.+.|....
T Consensus 79 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~~~ 146 (155)
T 3u53_A 79 ELNYVAR----NKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSIE 146 (155)
T ss_dssp EEEEEET----TEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCC----cceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhCch
Confidence 2111110 1123344555555443 23335678999999999999999999999999999888877654
No 4
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.90 E-value=2.4e-24 Score=179.68 Aligned_cols=166 Identities=16% Similarity=0.141 Sum_probs=125.1
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
..+.+|+|||+...+ ++.+|||+++.. .+.|.+|||+++.|||+++||+||++||||+.+.... .+
T Consensus 11 ~p~v~v~~vi~~~~~----------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~-~l 79 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNE----------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYME-QV 79 (226)
T ss_dssp CEEEEEEEEEEEEET----------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEE-EE
T ss_pred CCeEEEEEEEEEEeC----------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceE-EE
Confidence 567889999998654 467999999875 4679999999999999999999999999999987664 46
Q ss_pred eEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhcccccc
Q 027123 94 GIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQKVEI 173 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 173 (228)
+++....+.. .......+|.+.+.......++.|+.+++|+++++++++.. +|+.++..++.+++...
T Consensus 80 ~~~~~~~r~~------~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~--dh~~il~~a~~rlr~~~---- 147 (226)
T 2fb1_A 80 GAFGAIDRDP------GERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIF--DHPEMVDKAREMMKQKA---- 147 (226)
T ss_dssp EEECCTTSSS------SSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBST--THHHHHHHHHHHHHHHH----
T ss_pred EEeCCCCcCC------CceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccC--CHHHHHHHHHHHHHhhc----
Confidence 6664332211 11233445666555432222346788999999999998666 58899999999998877
Q ss_pred ceeeecCCCCCCCCccccccccccCeeeecCC
Q 027123 174 TEEIVEPLPKPVPDVIAECQIVSSNYCVTTTS 205 (228)
Q Consensus 174 ~~~~v~~~~lp~~~~~~e~~~~~~~~~~~~~~ 205 (228)
...++.+.++|..|++.++|.+=-..+..+..
T Consensus 148 ~y~~i~~~llp~~ftl~~l~~~ye~~~~~~~~ 179 (226)
T 2fb1_A 148 SVEPIGFNLLPKLFTLSQLQSLYEAIYGEPMD 179 (226)
T ss_dssp HHSGGGGGGSCSEEEHHHHHHHHHHHHTSCCC
T ss_pred ccCchHHHhCCccccHHHHHHHHHHHhCCCCC
Confidence 67789999999999999999865444443333
No 5
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.89 E-value=6.9e-22 Score=148.59 Aligned_cols=124 Identities=27% Similarity=0.297 Sum_probs=98.2
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEE
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWE 97 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~ 97 (228)
+..+|++|+++.++ +|||++++. +.|.||||+++.|||+.+||.||++||||+.+.... .++.+.
T Consensus 1 m~~~~~~vi~~~~~-------------~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~~~ 65 (126)
T 1vcd_A 1 MELGAGGVVFNAKR-------------EVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLL-PLYPTR 65 (126)
T ss_dssp CEEEEEEEEECTTS-------------CEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEE-EEEEEE
T ss_pred CeeEEEEEEEcCCC-------------EEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeecc-EEeEEE
Confidence 35688889988543 799999877 889999999999999999999999999999987663 577766
Q ss_pred EeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHH
Q 027123 98 FRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVM 165 (228)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l 165 (228)
+.... ....+++|.+...... ..++.|..+++|++++++.+++.++.++.+++.+++.+
T Consensus 66 ~~~~~--------~~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 66 YVNPK--------GVEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp EECTT--------SCEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHHS
T ss_pred EecCC--------ceEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHhc
Confidence 55421 1244566766554333 33567889999999999999999999999998887765
No 6
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.89 E-value=9.7e-22 Score=150.01 Aligned_cols=130 Identities=22% Similarity=0.308 Sum_probs=98.8
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhcee---eeeccccce
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVR---GKLNEKPLG 94 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~---~~~~~~~l~ 94 (228)
+.+|++|+++..+ ++.+|||++++. .+.|.||||+++.|||+.+||+||++||||+. +......++
T Consensus 3 ~~~~~~vi~~~~~----------~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~ 72 (138)
T 1ktg_A 3 VKAAGLVIYRKLA----------GKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHE 72 (138)
T ss_dssp EEEEEEEEEEEET----------TEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEE
T ss_pred eEEEEEEEEEecC----------CCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccc
Confidence 5688999998753 456899999874 35899999999999999999999999999995 333212234
Q ss_pred EEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHh
Q 027123 95 IWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMS 166 (228)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~ 166 (228)
.+.+.... ....+++|.+.........++.|+.+++|++++++.+++.++.++.+++.+.+.++
T Consensus 73 ~~~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 73 TLFYEAKG--------KPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EEEEEETT--------EEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC--------CceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 44444331 12456778887765323335678899999999999999999999999999888774
No 7
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.89 E-value=7.6e-22 Score=149.73 Aligned_cols=128 Identities=27% Similarity=0.376 Sum_probs=99.1
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEE
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEF 98 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~ 98 (228)
..+|++|+++. + +|||++++. +.|.||||+++.|||+.+||.||++||||+.+... ..++.+.+
T Consensus 4 ~~~~~~vi~~~-~-------------~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~ 67 (134)
T 2pbt_A 4 EFSAGGVLFKD-G-------------EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGEIHY 67 (134)
T ss_dssp EEEEEEEEEET-T-------------EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEE
T ss_pred ceEEEEEEEEC-C-------------EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEe-eeeeEEEE
Confidence 35677888873 2 899999887 88999999999999999999999999999998776 35776654
Q ss_pred eeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhh
Q 027123 99 RSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSE 167 (228)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~ 167 (228)
....... .....+++|.+........ +..|..+++|++++++.+++.++.++.++..+++.+..
T Consensus 68 ~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 68 WYTLKGE----RIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEEETTE----EEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred EeeCCCc----EEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 4332111 1124566777776544333 33488999999999999999999999999999988764
No 8
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.88 E-value=2.6e-22 Score=171.79 Aligned_cols=166 Identities=16% Similarity=0.161 Sum_probs=121.8
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeecc-c
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNE-K 91 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~-~ 91 (228)
.....+|+|||+...++ .+..+|||+++.. .+.|.||||+++.|||+++||+||++||||+.+.... .
T Consensus 36 ~~p~v~v~~vv~~~~~~--------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~ 107 (273)
T 2fml_A 36 EKPSLTVDMVLLCYNKE--------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIE 107 (273)
T ss_dssp CCCEEEEEEEEEEEETT--------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred CCCceEEEEEEEEEcCC--------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEE
Confidence 45678999999987641 0267999999875 4679999999999999999999999999998754321 1
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhc----------------------
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC---------------------- 149 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~---------------------- 149 (228)
.+++|..+.+.. .......+|.+.+.... ..++.|..+++|++++++...+
T Consensus 108 ~l~~~~~~~r~~------~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~ 180 (273)
T 2fml_A 108 QLHSFSRPDRDP------RGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKD 180 (273)
T ss_dssp EEEEECCTTSST------TSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSS
T ss_pred EEEEEcCCCCCC------CceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCC
Confidence 244443222111 12245566666665443 3456788999999999864432
Q ss_pred -CchHHHHHHHHHHHHHhhccccccceeeecCCCCCCCCccccccccccCee
Q 027123 150 -RYEWMREALEKFMKVMSEEQKVEITEEIVEPLPKPVPDVIAECQIVSSNYC 200 (228)
Q Consensus 150 -~~~~~~~~l~~~l~~l~~~~~~~~~~~~v~~~~lp~~~~~~e~~~~~~~~~ 200 (228)
..-+|+.++..++.+++... ...++.+.++|.+||+.|+|.+=-..+
T Consensus 181 ~LafdH~~Il~~al~rlr~kl----~y~~i~~~llp~~FTl~~l~~~ye~i~ 228 (273)
T 2fml_A 181 TLAFDHSEIIIKAFNRVVDKM----EHEPQVLQVLGKDFTITEARKVFAKFL 228 (273)
T ss_dssp CCSTTHHHHHHHHHHHHHHHT----TTCCGGGGGGCSCBCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHh----cCCcHHHHhCCccccHHHHHHHHHHHh
Confidence 22379999999999999888 888999999999999999998654333
No 9
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.88 E-value=1.4e-21 Score=151.45 Aligned_cols=137 Identities=18% Similarity=0.243 Sum_probs=100.6
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccce-EEEE
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLG-IWEF 98 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~-~~~~ 98 (228)
.+|+++++...+ ++.+|||+++...+.|.||||+++.|||+.+||+||++||||+.+......+. .+.+
T Consensus 6 ~~v~vvi~~~~~----------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 75 (149)
T 3son_A 6 FQVLVIPFIKTE----------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASI 75 (149)
T ss_dssp CEEEEEEEEECS----------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEE
T ss_pred eEEEEEEEEecC----------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecc
Confidence 467788886654 45699999998888999999999999999999999999999998765311122 2222
Q ss_pred eeCCcccCCCCCCcEEEEEEEEEeCccc-cCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhc
Q 027123 99 RSKSKQDLHSLEGGCRGYMFSLEVTEEL-EIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEE 168 (228)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~ 168 (228)
+.... . .........++|.+...... ....+.|+.+++|++++++.+++.++.++.++..+.+.+...
T Consensus 76 ~~~~~-~-~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 76 PNFHF-S-FNKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp EGGGT-C-SSSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred cceee-c-cCCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 21111 1 01123355677888876321 222357899999999999999999999999999999887654
No 10
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.87 E-value=2.9e-22 Score=161.74 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=101.4
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCC----cceEEEEEe----------CCCCCeEecccccCCCCCHHHHHHHHHHHH
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQT----RIEVLMVSS----------PNRSDLVFPKGGWENDETVMEAACREALEE 81 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~----~~~vLLv~~----------~~~~~W~lPgG~ie~gEt~~eAA~REl~EE 81 (228)
.....+|+|+++...+ + +.+|||+++ ...+.|.||||+++.|||+.+||+||++||
T Consensus 24 ~p~~~~v~~vv~~~~~----------~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EE 93 (187)
T 3i9x_A 24 TPDGYTSDMILTTVKE----------LNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEE 93 (187)
T ss_dssp CCSEEEEEEEEEEEEE----------ETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEcC----------CCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHH
Confidence 3455899999998765 3 569999998 245779999999999999999999999999
Q ss_pred hceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccc--cCCCCCcceeeEEEehhhHhhhcCchHHHHHHH
Q 027123 82 AGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEEL--EIWPEQENRYRKWLNIQDAFQLCRYEWMREALE 159 (228)
Q Consensus 82 TGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~ 159 (228)
||+.+.... .++++.+...... ......+|.+.+.... ...+..|..+++|++++++..+...++++.++.
T Consensus 94 tGl~~~~~~-~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~ 166 (187)
T 3i9x_A 94 TSLTDIPLI-PFGVFDKPGRDPR------GWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLK 166 (187)
T ss_dssp HCCCSCCCE-EEEEECCTTSSTT------SSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHH
T ss_pred HCCCCcceE-EEEEEcCCccCCC------CCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHH
Confidence 999877663 4666543322111 1233344444443321 122467888999999999998877778999999
Q ss_pred HHHHHHhhcc
Q 027123 160 KFMKVMSEEQ 169 (228)
Q Consensus 160 ~~l~~l~~~~ 169 (228)
.+++.++...
T Consensus 167 ~a~~~l~~~~ 176 (187)
T 3i9x_A 167 KAFSAITEEF 176 (187)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 9999988765
No 11
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.86 E-value=8e-22 Score=159.69 Aligned_cols=156 Identities=18% Similarity=0.211 Sum_probs=105.6
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEE
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWE 97 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~ 97 (228)
+..+++||+++. + +|||++++..+.|.+|||+++.|||+.+||+||++||||+.+... ..++.+.
T Consensus 3 ~~~v~~~vi~~~-~-------------~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~ 67 (188)
T 3fk9_A 3 LQRVTNCIVVDH-D-------------QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNP-ELKGIFS 67 (188)
T ss_dssp CCEEEEEEEEET-T-------------EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSC-EEEEEEE
T ss_pred ceEEEEEEEEEC-C-------------EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCc-eEEEEEE
Confidence 345677777763 2 799999988889999999999999999999999999999998766 3567776
Q ss_pred EeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHH---hhccccccc
Q 027123 98 FRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVM---SEEQKVEIT 174 (228)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l---~~~~~~~~~ 174 (228)
+........ ......++|.+....... .+..+..+++|+++++++.+...++++.++..+++.. ........+
T Consensus 68 ~~~~~~~~~---~~~~~~~~f~a~~~~~~~-~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~~~~~~~~~~~y~~~ 143 (188)
T 3fk9_A 68 MVIFDEGKI---VSEWMLFTFKATEHEGEM-LKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHSDRLLYGTFHYTPD 143 (188)
T ss_dssp EEEEETTEE---EEEEEEEEEEESCEESCC-CSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTTCCSCEEEEEEECTT
T ss_pred EEecCCCcc---eEEEEEEEEEEECCCCCC-cCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHcCCCcEEEEEEECCC
Confidence 554322110 001134556654333222 2345667999999999999988899999888876642 112223344
Q ss_pred eeeecCCCCCCCCcccccc
Q 027123 175 EEIVEPLPKPVPDVIAECQ 193 (228)
Q Consensus 175 ~~~v~~~~lp~~~~~~e~~ 193 (228)
..++++++.|.+ +++|-.
T Consensus 144 ~~l~~~~l~~~~-~~~e~~ 161 (188)
T 3fk9_A 144 FELLSYRLDPEP-QMKKKG 161 (188)
T ss_dssp CCEEEEEEESCC-------
T ss_pred CEEEEEEeccCh-hhcccc
Confidence 567788887777 566543
No 12
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.86 E-value=3.6e-21 Score=150.26 Aligned_cols=131 Identities=21% Similarity=0.202 Sum_probs=100.0
Q ss_pred cCCCCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeec
Q 027123 13 RYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLN 89 (228)
Q Consensus 13 ~~~~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~ 89 (228)
++......+|++++++.++ +|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+...
T Consensus 14 ~~~~~~~~~v~~~i~~~~~-------------~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 80 (156)
T 3gg6_A 14 RLRKNVCYVVLAVFLSEQD-------------EVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE 80 (156)
T ss_dssp CCCTTCEEEEEEECBCTTS-------------EEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE
T ss_pred ccCCceEEEEEEEEEeCCC-------------EEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee
Confidence 6667777788888877543 899999876 577999999999999999999999999999998776
Q ss_pred cccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccC---CCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHh
Q 027123 90 EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEI---WPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMS 166 (228)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~ 166 (228)
. .++.+... .....++|.+........ .++.|..+++|++++++++.+..+..+.++..+...+.
T Consensus 81 ~-~~~~~~~~-----------~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (156)
T 3gg6_A 81 T-LLSVEERG-----------PSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQ 148 (156)
T ss_dssp E-EEEEEESS-----------TTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHHH
T ss_pred e-EEEEEcCC-----------CCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHhh
Confidence 3 45555311 113445666665432211 24468889999999999999999988999988877765
Q ss_pred hc
Q 027123 167 EE 168 (228)
Q Consensus 167 ~~ 168 (228)
..
T Consensus 149 ~~ 150 (156)
T 3gg6_A 149 QA 150 (156)
T ss_dssp HH
T ss_pred cC
Confidence 43
No 13
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.86 E-value=8.3e-21 Score=154.43 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=95.4
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhcee-eeeccccce
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVR-GKLNEKPLG 94 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~-~~~~~~~l~ 94 (228)
.....+|++++++.+ ..+|||++++..+.|.||||+++.|||+.+||+||++||||+. +......+.
T Consensus 42 ~~~h~~~~~vv~~~~------------~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~ 109 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKE------------RNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAF 109 (197)
T ss_dssp SSEEEEEEEEEECTT------------SCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCS
T ss_pred CCccEEEEEEEEECC------------CCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCce
Confidence 456678888888754 2389999999888999999999999999999999999999998 554322222
Q ss_pred EEEEeeCCcccCCC---CCCcEEEEEEEEEeCcccc-CCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhccc
Q 027123 95 IWEFRSKSKQDLHS---LEGGCRGYMFSLEVTEELE-IWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQK 170 (228)
Q Consensus 95 ~~~~~~~~~~~~~~---~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~~~ 170 (228)
.+.+.......... ....+...+|.+.+..... ..++.|+.+++|++++++.+++.++..+.+++++++.+.+..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~~ 189 (197)
T 3fcm_A 110 ALDVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQSK 189 (197)
T ss_dssp EEEEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC---
T ss_pred EEEEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhccc
Confidence 22222111100000 0001122445555544322 2345788999999999999999999999999999999987653
No 14
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.85 E-value=3.7e-20 Score=144.13 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=97.7
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCC-----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNR-----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEK 91 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~-----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~ 91 (228)
.++.+|++|+++.++ +|||+++... +.|.||||+++.|||+.+||+||++||||+.+....
T Consensus 6 ~~~~~v~~vi~~~~~-------------~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~- 71 (153)
T 3grn_A 6 PYIISVYALIRNEKG-------------EFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGD- 71 (153)
T ss_dssp CEEEEEEEEEECTTC-------------CEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCS-
T ss_pred ceEEEEEEEEEcCCC-------------cEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecce-
Confidence 467788888887543 7999998764 679999999999999999999999999999987663
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhc-CchHHHHHHHHHHHHHh
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC-RYEWMREALEKFMKVMS 166 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~l~~l~ 166 (228)
.++.+.+..... ....++|.+........ ...|..+++|++++++.++. ..+..+.+++.+.+.-.
T Consensus 72 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~~~ 138 (153)
T 3grn_A 72 IAGQVNFELTEK--------KVIAIVFDGGYVVADVK-LSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENK 138 (153)
T ss_dssp EEEEEEEECSSC--------EEEEEEEEEEECCCCCC-CCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHHHT
T ss_pred EEEEEEEecCCc--------eEEEEEEEEEecCCcEe-cCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhcccc
Confidence 567665443321 23456666665543322 35788999999999999998 88888888888776543
No 15
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.85 E-value=2.6e-20 Score=143.55 Aligned_cols=139 Identities=23% Similarity=0.312 Sum_probs=98.1
Q ss_pred ccCcccccCCCCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhcee
Q 027123 6 RTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVR 85 (228)
Q Consensus 6 ~~gr~~~~~~~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~ 85 (228)
..|.....+....+..|++|+++.. ..+|||++++. +.|.||||+++.|||+.+||+||++||||+.
T Consensus 5 ~~g~k~~~~~~~~~~~~~~vi~~~~------------~~~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 71 (148)
T 2azw_A 5 TFGKREETLTYQTRYAAYIIVSKPE------------NNTMVLVQAPN-GAYFLPGGEIEGTETKEEAIHREVLEELGIS 71 (148)
T ss_dssp EESCCCSSSCCEECCEEEEECEEGG------------GTEEEEEECTT-SCEECSEEECCTTCCHHHHHHHHHHHHHSEE
T ss_pred ccCCCccCcceeeeeEEEEEEECCC------------CCeEEEEEcCC-CCEeCCCcccCCCCCHHHHHHHHHHHHhCCe
Confidence 3444444444455667888888752 23899999754 7899999999999999999999999999999
Q ss_pred eeeccccceEEE-EeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHH
Q 027123 86 GKLNEKPLGIWE-FRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFM 162 (228)
Q Consensus 86 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l 162 (228)
+.... .++.+. +........ ......++|.+....... .+..|+.+++|++++++.+++.++.++.++..++
T Consensus 72 ~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 72 VEIGC-YLGEADEYFYSNHRQT---AYYNPGYFYVANTWRQLS-EPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWL 144 (148)
T ss_dssp EEEEE-EEEEEEEEEEETTTTE---EEEEEEEEEEEEEEEECS-SCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHH
T ss_pred eEeee-EEEEEEEEEcCCCCCc---ceEEEEEEEEEEcCcCCc-CCCCceeeEEEeeHHHHHhhhcchhHHHHHHHHH
Confidence 87663 466553 221111110 112345667776554332 2456778999999999999999999999988876
No 16
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.84 E-value=2.5e-20 Score=146.09 Aligned_cols=133 Identities=18% Similarity=0.116 Sum_probs=91.4
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEE
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWE 97 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~ 97 (228)
.+.+|+||+++. + +|||++++..+.|.||||+++.|||+.+||+||++||||+.+.... .++++.
T Consensus 5 ~~~~v~~vi~~~-~-------------~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~ 69 (159)
T 3f6a_A 5 RHFTVSVFIVCK-D-------------KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYN-PIDINL 69 (159)
T ss_dssp SCEEEEEEEEET-T-------------EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECC-CCCHHH
T ss_pred ceEEEEEEEEEC-C-------------EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecc-cccccc
Confidence 356788888883 2 8999999888899999999999999999999999999999987664 343210
Q ss_pred -----------EeeCCcc--cCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhc-CchHHHHHHHHHHH
Q 027123 98 -----------FRSKSKQ--DLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC-RYEWMREALEKFMK 163 (228)
Q Consensus 98 -----------~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~l~ 163 (228)
+...... ...........++|.+..........+.|..+++|++++++.++. ..++.+.+.+.+..
T Consensus 70 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 149 (159)
T 3f6a_A 70 KKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATEALD 149 (159)
T ss_dssp HHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHHHHH
T ss_pred cccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHHHHH
Confidence 0000000 000011124446777776654443346789999999999999987 55555556555544
Q ss_pred HH
Q 027123 164 VM 165 (228)
Q Consensus 164 ~l 165 (228)
.+
T Consensus 150 ~~ 151 (159)
T 3f6a_A 150 LL 151 (159)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 17
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.84 E-value=3e-20 Score=164.83 Aligned_cols=150 Identities=21% Similarity=0.222 Sum_probs=105.3
Q ss_pred EEEEEEEEEeccCC------Cccccc----ccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeee
Q 027123 19 RLVSGCIPYRLTKD------AEDENE----DTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKL 88 (228)
Q Consensus 19 r~~vg~ii~~~~~~------~~~~~~----~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~ 88 (228)
..++|+|+|++... +.-... +.++..+|||++++..+.|.||||+++.|||+.+||+||++||||+.+..
T Consensus 3 ~~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~ 82 (364)
T 3fjy_A 3 LEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKL 82 (364)
T ss_dssp CCEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEE
T ss_pred ccccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeee
Confidence 35789999997531 000001 11467899999998888999999999999999999999999999999877
Q ss_pred ccccceEEEEeeCCcccC-----CCCCCcEEEEEEEEEeCccc------------cCCCCCcceeeEEEehhhHhhhcCc
Q 027123 89 NEKPLGIWEFRSKSKQDL-----HSLEGGCRGYMFSLEVTEEL------------EIWPEQENRYRKWLNIQDAFQLCRY 151 (228)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~f~~~~~~~~------------~~~~~~e~~~~~W~~~~el~~~~~~ 151 (228)
.. .++.+.|........ ........+++|.+...... ....+.|+.+++|++++++.+++.+
T Consensus 83 ~~-~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 161 (364)
T 3fjy_A 83 GP-YLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSH 161 (364)
T ss_dssp EE-EEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSC
T ss_pred cc-ccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcc
Confidence 63 466655543321100 00011245677777765432 1124568999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhcc
Q 027123 152 EWMREALEKFMKVMSEEQ 169 (228)
Q Consensus 152 ~~~~~~l~~~l~~l~~~~ 169 (228)
+..+.++..+++.++.+.
T Consensus 162 ~~~r~il~~~~~~l~~g~ 179 (364)
T 3fjy_A 162 STDKDTLAVFVDRVQEGA 179 (364)
T ss_dssp HHHHHHHHHHHHHHHTTG
T ss_pred hhhHHHHHHHHHHhccCC
Confidence 999999999999987654
No 18
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.84 E-value=3.9e-20 Score=142.50 Aligned_cols=133 Identities=22% Similarity=0.167 Sum_probs=93.8
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeecc-ccceEEE
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNE-KPLGIWE 97 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~-~~l~~~~ 97 (228)
.+|++++++..+ .+|||++++. .+.|.||||+++.|||+.+||+||++||||+.+.... ..++.+.
T Consensus 10 ~~v~~~i~~~~~------------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 77 (150)
T 2o1c_A 10 VSILVVIYAQDT------------KRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQR 77 (150)
T ss_dssp EEEEEEEEETTT------------CEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEE
T ss_pred eEEEEEEEeCCC------------CEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeec
Confidence 578888887532 2899999876 5789999999999999999999999999999876531 1233322
Q ss_pred Ee-----eCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHH
Q 027123 98 FR-----SKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVM 165 (228)
Q Consensus 98 ~~-----~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l 165 (228)
.. ................++|.+.+...... ...|+.+++|++++++.++..++.++.+++.+++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 149 (150)
T 2o1c_A 78 TVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINA 149 (150)
T ss_dssp EEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC-
T ss_pred eeeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHhc
Confidence 11 10000000111235667788877654332 347889999999999999999999999988776543
No 19
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.83 E-value=3e-20 Score=152.39 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=99.4
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEE
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIW 96 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~ 96 (228)
..+.+|++++++. + +|||+++...+.|.||||++++|||+.+||+||++||||+.+... ..++.+
T Consensus 66 ~~~~~v~~vv~~~-~-------------~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~-~~l~~~ 130 (205)
T 3q1p_A 66 TPKVDIRAVVFQN-E-------------KLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF-KLLAIF 130 (205)
T ss_dssp CCEEEEEEEEEET-T-------------EEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEE
T ss_pred CCcceEEEEEEEC-C-------------EEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc-eEEEEE
Confidence 4667888888862 2 899999987789999999999999999999999999999998866 356666
Q ss_pred EEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhc
Q 027123 97 EFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEE 168 (228)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~ 168 (228)
......... ........+|.+....... .++.|..+++|+++++++++...+..++.+..+++.+...
T Consensus 131 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~~ 198 (205)
T 3q1p_A 131 DKEKHQPSP---SATHVYKIFIGCEIIGGEK-KTSIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDP 198 (205)
T ss_dssp EHHHHSCCC---CSSCEEEEEEEEEEEEECC-CCCTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCT
T ss_pred eccccCCCC---CCceEEEEEEEEEecCCcc-CCCCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhCC
Confidence 543221111 1123455667776654433 2458899999999999999999999999999988876543
No 20
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.83 E-value=1.4e-20 Score=153.32 Aligned_cols=150 Identities=28% Similarity=0.498 Sum_probs=88.4
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccce
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLG 94 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~ 94 (228)
..++..++||++..++ +.+|||+++.. .+.|.||||++++|||+++||+||++||||+++.... .++
T Consensus 37 ~~~~~~~~~vi~~~~~-----------~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~-~l~ 104 (194)
T 2fvv_A 37 DGYKKRAACLCFRSES-----------EEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGR-LVG 104 (194)
T ss_dssp TSCEEEEEEEEESSTT-----------CCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEE-EEE
T ss_pred CCccccEEEEEEEECC-----------CCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccce-EEE
Confidence 4678888899886532 45899999764 4789999999999999999999999999999987663 567
Q ss_pred EEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCC--CcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhccccc
Q 027123 95 IWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPE--QENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQKVE 172 (228)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~--~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~~~~~ 172 (228)
.+.+... ....++|.+.+.......+. .+..+++|++++++.+++. +++..+..++..+....
T Consensus 105 ~~~~~~~----------~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~--~~~~~~~~~l~~l~~~~--- 169 (194)
T 2fvv_A 105 IFENQER----------KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQ--YHKPVQASYFETLRQGY--- 169 (194)
T ss_dssp EEEETTT----------TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHT--TTCHHHHHHTCC--------
T ss_pred EEEcCCC----------ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHh--cCcHHHHHHHHHHhhcc---
Confidence 6653211 12345566554432222121 2346899999999999876 34455566665555444
Q ss_pred cceeeecCCCCCCCCccccccc
Q 027123 173 ITEEIVEPLPKPVPDVIAECQI 194 (228)
Q Consensus 173 ~~~~~v~~~~lp~~~~~~e~~~ 194 (228)
... ....++|.+|+.+.-.+
T Consensus 170 -~~~-~~~~~~~~~f~~~~~~~ 189 (194)
T 2fvv_A 170 -SAN-NGTPVVATTYSVSAQSS 189 (194)
T ss_dssp ----------------------
T ss_pred -ccc-CchhccCcceEEeeccc
Confidence 222 25566666776554333
No 21
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.83 E-value=1.1e-19 Score=139.33 Aligned_cols=121 Identities=19% Similarity=0.099 Sum_probs=90.9
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCC------CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeecccc
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN------RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKP 92 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~------~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~ 92 (228)
..+|++|+++ ++ +|||+++.. .+.|.||||+++.|||+.+||.||++||||+.+.... .
T Consensus 6 ~~~v~~vi~~-~~-------------~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~-~ 70 (140)
T 3gwy_A 6 IEVVAAVIRL-GE-------------KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGE-K 70 (140)
T ss_dssp EEEEEEEEEE-TT-------------EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-E
T ss_pred EEEEEEEEEe-CC-------------EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEece-E
Confidence 4566777776 33 799999874 3569999999999999999999999999999987763 4
Q ss_pred ceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHH
Q 027123 93 LGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKV 164 (228)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~ 164 (228)
++.+.+.... ....+++|.+....... ...|..+++|++++++.++...+.++.+++.+.+.
T Consensus 71 ~~~~~~~~~~--------~~~~~~~f~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 132 (140)
T 3gwy_A 71 LLTVHHTYPD--------FEITMHAFLCHPVGQRY--VLKEHIAAQWLSTREMAILDWAEADKPIVRKISEQ 132 (140)
T ss_dssp EEEEECCCSS--------CCEEEEEEEEEECCSCC--CCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHHC-
T ss_pred EEEEEEEeCC--------ceEEEEEEEEEecCCcc--cccccceeEeccHHHHhhCCCCcccHHHHHHHHhC
Confidence 6665543321 23556778887665422 34678899999999999999999888888776544
No 22
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.83 E-value=1.5e-19 Score=138.43 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=90.6
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcce--EEEEEeCCC-CCeEecccccCCCCCHHHHHHHHHHHHhceeeeecccc
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIE--VLMVSSPNR-SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKP 92 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~--vLLv~~~~~-~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~ 92 (228)
...+.+|++|+++.++ +.+ |||+++... +.|.||||+++.|||+.+||+||++||||+.+.... .
T Consensus 6 ~~p~~~v~~vi~~~~~-----------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~ 73 (139)
T 2yyh_A 6 KTPLLATDVIIRLWDG-----------ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHK-L 73 (139)
T ss_dssp CCCEEEEEEEEEEEET-----------TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEE-E
T ss_pred cCCeEEEEEEEEEEcC-----------CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccce-E
Confidence 3457788999998543 235 999998753 459999999999999999999999999999987653 4
Q ss_pred ceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHh-hhcCchHHHHHHHHHHH
Q 027123 93 LGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAF-QLCRYEWMREALEKFMK 163 (228)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~-~~~~~~~~~~~l~~~l~ 163 (228)
++.+.++.... ......++|.+...+. ..++.|..+++|++++++. +.+.++ ++.++..+++
T Consensus 74 ~~~~~~~~~~~------~~~~~~~~f~~~~~~~--~~~~~e~~~~~W~~~~el~~~~l~~~-~~~~l~~~l~ 136 (139)
T 2yyh_A 74 MGVYSDPERDP------RAHVVSVVWIGDAQGE--PKAGSDAKKVKVYRLEEIPLDKLVFD-HKKIILDFLK 136 (139)
T ss_dssp EEEECCTTSCT------TSCEEEEEEEEEEESC--CCCCTTEEEEEEECTTSCCGGGBCTT-HHHHHHHHHH
T ss_pred EEEECCCCcCC------CceEEEEEEEEecCCc--cCCCCCcceEEEEEHHHCCHhhcCCC-HHHHHHHHHh
Confidence 55554322111 1235566777776332 2256688999999999999 444443 6777777654
No 23
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.82 E-value=1.3e-19 Score=142.15 Aligned_cols=123 Identities=19% Similarity=0.171 Sum_probs=89.9
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeC---CCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSP---NRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~---~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
..+.+|++|+++. + +|||+++. ..+.|.||||+++.|||+.+||+||++||||+.+... ..+
T Consensus 27 ~~~~~v~~vi~~~-~-------------~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~ 91 (157)
T 4dyw_A 27 QPRVGCGAAIVRD-G-------------RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA-TLL 91 (157)
T ss_dssp CCEEEEEEEEEET-T-------------EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC-EEE
T ss_pred CceeEEEEEEEEC-C-------------EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC-cEE
Confidence 4667888888883 2 79999987 3577999999999999999999999999999998766 357
Q ss_pred eEEEEeeCCcccCCCCCCcEEEEEEEEEeCcccc-CCCCCcceeeEEEehhhHhhhcCchHHHHHHHHH
Q 027123 94 GIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELE-IWPEQENRYRKWLNIQDAFQLCRYEWMREALEKF 161 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 161 (228)
+.+.+...... .....++|.+....... .....|..+++|++++++.+. ..+..+.+++.+
T Consensus 92 ~~~~~~~~~~~------~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~-l~~~~~~~l~~l 153 (157)
T 4dyw_A 92 CVVDHIDAANG------EHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQP-LTHATRIALEQV 153 (157)
T ss_dssp EEEEEEETTTT------EEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSS-BCHHHHHHHHHH
T ss_pred EEEEeeccCCC------cEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcccc-cCHHHHHHHHHH
Confidence 77665543221 12345566665443322 223467899999999999984 455666666654
No 24
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.82 E-value=1.5e-19 Score=141.41 Aligned_cols=128 Identities=14% Similarity=0.148 Sum_probs=90.1
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEe
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFR 99 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~ 99 (228)
.+|++|+++ ++ +|||++++..+.|.||||+++.|||+.+||.||++||||+++..... ++.+.+.
T Consensus 2 ~~~~~vi~~-~~-------------~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~ 66 (156)
T 1k2e_A 2 IVTSGVLVE-NG-------------KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGF-TYGIIDE 66 (156)
T ss_dssp EEEEEECEE-TT-------------EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCC-CCCCBSS
T ss_pred eEEEEEEEE-CC-------------EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccc-eeeeccc
Confidence 567888887 33 79999998888999999999999999999999999999999876532 3211110
Q ss_pred ---e-CCc-------ccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhc
Q 027123 100 ---S-KSK-------QDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEE 168 (228)
Q Consensus 100 ---~-~~~-------~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~ 168 (228)
. ... .............+|.+... +.|..+++|++++++..+..++.++.+++.+++.+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-------~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 139 (156)
T 1k2e_A 67 NAVERPMPLVILEEVVKYPEETHIHFDLIYLVKRV-------GGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRL 139 (156)
T ss_dssp SEEECCCCSEEEEEEEECSSCEEEEEEEEEEEEEE-------EECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHHH
T ss_pred ccccccccceeeeeeecCCCCceEEEEEEEEEEec-------CCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHhh
Confidence 0 000 00000000112234555422 33577899999999999988899999999999887664
Q ss_pred c
Q 027123 169 Q 169 (228)
Q Consensus 169 ~ 169 (228)
.
T Consensus 140 g 140 (156)
T 1k2e_A 140 G 140 (156)
T ss_dssp H
T ss_pred c
Confidence 4
No 25
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.82 E-value=3.3e-19 Score=138.19 Aligned_cols=111 Identities=23% Similarity=0.274 Sum_probs=80.4
Q ss_pred eEEEEEeCCCC---CeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEE
Q 027123 45 EVLMVSSPNRS---DLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLE 121 (228)
Q Consensus 45 ~vLLv~~~~~~---~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 121 (228)
+|||+++...+ .|.||||+++.|||+.+||+||++||||+.+... ..++.+.+..... ......++|.+.
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~------~~~~~~~~f~~~ 92 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE-VLTGIYHWTCASN------GTTYLRFTFSGQ 92 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE-EEEEEEEEEETTT------TEEEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc-eEEEEEEEeCCCC------CcEEEEEEEEEE
Confidence 79999987644 6999999999999999999999999999998766 3577766554321 112344567776
Q ss_pred eCcccc-CCCCCcceeeEEEehhhHhhh---cCchHHHHHHHHHH
Q 027123 122 VTEELE-IWPEQENRYRKWLNIQDAFQL---CRYEWMREALEKFM 162 (228)
Q Consensus 122 ~~~~~~-~~~~~e~~~~~W~~~~el~~~---~~~~~~~~~l~~~l 162 (228)
...... ...+.|..+++|++++++.++ ...+..+.++..++
T Consensus 93 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 93 VVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYH 137 (153)
T ss_dssp EEEECTTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHH
T ss_pred eCCCCCCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHH
Confidence 544322 234678899999999999985 45555555555443
No 26
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.82 E-value=1.7e-19 Score=140.87 Aligned_cols=131 Identities=18% Similarity=0.192 Sum_probs=89.7
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeee-cccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKL-NEKP 92 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~-~~~~ 92 (228)
..+.+|++|+++.++ +|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+.. ....
T Consensus 16 ~~~~~v~~vi~~~~~-------------~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~ 82 (160)
T 1rya_A 16 TPLVSLDFIVENSRG-------------EFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQF 82 (160)
T ss_dssp SCEEEEEEEEECTTS-------------CEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEE
T ss_pred CcEEEEEEEEEcCCC-------------EEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceE
Confidence 356788888886433 799999876 47799999999999999999999999999998642 1134
Q ss_pred ceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhc-CchHHHHHHHH
Q 027123 93 LGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC-RYEWMREALEK 160 (228)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~ 160 (228)
++.+.+.................++|.+.........+..|..+++|++++++.++. ..+..+.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~ 151 (160)
T 1rya_A 83 YGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLA 151 (160)
T ss_dssp EEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCH
T ss_pred EEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHH
Confidence 666655433221000001134566777776544333346688999999999999863 44555555543
No 27
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.82 E-value=2.6e-19 Score=139.00 Aligned_cols=124 Identities=19% Similarity=0.325 Sum_probs=88.2
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeC--CCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceE
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSP--NRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGI 95 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~--~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~ 95 (228)
.+.+|++|+.+.+ +|||+++. ..+.|.||||+++.|||+.+||+||++||||+.+... ..++.
T Consensus 4 p~~~v~~ii~~~~--------------~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~ 68 (153)
T 3shd_A 4 PHVTVACVVHAEG--------------KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ-HFIRM 68 (153)
T ss_dssp CEEEEEEEEEETT--------------EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-EEEEE
T ss_pred CceEEEEEEEeCC--------------EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC-cEEEE
Confidence 3556666666532 79999884 3456999999999999999999999999999998765 35666
Q ss_pred EEEeeCCcccCCCCCCcEEEEEEEEEeCccc-cCCCCCcceeeEEEehhhHhh--hcCchHHHHHHHHHHH
Q 027123 96 WEFRSKSKQDLHSLEGGCRGYMFSLEVTEEL-EIWPEQENRYRKWLNIQDAFQ--LCRYEWMREALEKFMK 163 (228)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~~~W~~~~el~~--~~~~~~~~~~l~~~l~ 163 (228)
+.+..... .....++|.+...... ....+.|..+++|++++++.. ....+..+.++..++.
T Consensus 69 ~~~~~~~~-------~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 69 HQWIAPDK-------TPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQS 132 (153)
T ss_dssp EEECCTTS-------CCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHHHHH
T ss_pred EEEecCCC-------ceEEEEEEEEEccccCcCCCCcccceeeEEecHHHhhccccccCchHHHHHHHHHh
Confidence 65554321 1245577888766543 233467899999999999932 2345555666655554
No 28
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.82 E-value=3.3e-19 Score=137.88 Aligned_cols=111 Identities=22% Similarity=0.233 Sum_probs=87.0
Q ss_pred eEEEEEeCCC----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEE
Q 027123 45 EVLMVSSPNR----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSL 120 (228)
Q Consensus 45 ~vLLv~~~~~----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 120 (228)
+|||+++... +.|.||||+++.||++.+||.||++||||+.+.... .++.+.+..... ...+++|.+
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~ 104 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGE-LKLACTHSYGDV--------GILILFYEI 104 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCC-EEEEEEEEETTE--------EEEEEEEEE
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCc-eEEEEEEecCCC--------eEEEEEEEE
Confidence 8999998764 779999999999999999999999999999987663 466655443322 134566776
Q ss_pred EeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHh
Q 027123 121 EVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMS 166 (228)
Q Consensus 121 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~ 166 (228)
...... ....|..+++|++++++.++...+.++.+++.+.+.+.
T Consensus 105 ~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 105 LYWKGE--PRAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp CEEESC--CCCSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred EECCCC--cCCCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 654332 24567889999999999999998999999988877653
No 29
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.81 E-value=2e-19 Score=142.47 Aligned_cols=124 Identities=23% Similarity=0.152 Sum_probs=89.0
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccce
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLG 94 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~ 94 (228)
..++..|++|+++.+ +|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+.... .++
T Consensus 20 ~~~~~~v~~ii~~~~--------------~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~ 84 (171)
T 3id9_A 20 NIMQVRVTGILIEDE--------------KVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKK-LLY 84 (171)
T ss_dssp --CEEEEEEEEEETT--------------EEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EEE
T ss_pred CceEEEEEEEEEECC--------------EEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccce-EEE
Confidence 356778888888642 799999876 6789999999999999999999999999999987663 466
Q ss_pred EEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCC-----CCCcceeeEEEehhhHhhhcCchHHHHHHHHHH
Q 027123 95 IWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIW-----PEQENRYRKWLNIQDAFQLCRYEWMREALEKFM 162 (228)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-----~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l 162 (228)
.+.+..... .....+|.+......... ...|..+++|++++++.++...+..+.+++..+
T Consensus 85 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~ 149 (171)
T 3id9_A 85 VCDKPDASP--------SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGGL 149 (171)
T ss_dssp EEEETTSSS--------CEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGG
T ss_pred EEcccCCCC--------cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhh
Confidence 665443221 133445666554332221 346788999999999999988888777776653
No 30
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.81 E-value=7.2e-19 Score=142.12 Aligned_cols=125 Identities=22% Similarity=0.364 Sum_probs=95.5
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
..+.+|++|+++ ++ +|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+... ..+
T Consensus 38 ~~~~~v~~ii~~-~~-------------~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~ 102 (189)
T 3cng_A 38 NPKVIVGCIPEW-EN-------------KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIR-ELY 102 (189)
T ss_dssp CCEEEEEEEEEE-TT-------------EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEE
T ss_pred CCceEEEEEEEe-CC-------------EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccc-eeE
Confidence 355688888887 32 799999875 567999999999999999999999999999997765 345
Q ss_pred eEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHh-hhcCchHHHHHHHHHHHHHhh
Q 027123 94 GIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAF-QLCRYEWMREALEKFMKVMSE 167 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~-~~~~~~~~~~~l~~~l~~l~~ 167 (228)
+.+.++.. ....++|.+....... .++.|..+++|++++++. ..+.++..+.++..++.....
T Consensus 103 ~~~~~~~~----------~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~ 166 (189)
T 3cng_A 103 AVYSLPHI----------SQVYMLFRAKLLDLDF-FPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHH 166 (189)
T ss_dssp EEEEEGGG----------TEEEEEEEEEECCSCC-CCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC----------cEEEEEEEEEeCCCcc-CCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccC
Confidence 55544321 2456777777654432 246788999999999998 556778888888888876554
No 31
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.81 E-value=1.6e-19 Score=148.12 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=99.7
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEE
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIW 96 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~ 96 (228)
..+.+|++++++. + +|||+++. .+.|.||||+++.|||+.+||.||++||||+.+.... .++.+
T Consensus 68 ~~~~~v~~vv~~~-~-------------~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~ 131 (206)
T 3o8s_A 68 TPKLDTRAAIFQE-D-------------KILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQR-VVAIL 131 (206)
T ss_dssp CCEEEEEEEEEET-T-------------EEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEE-EEEEE
T ss_pred CCCccEEEEEEEC-C-------------EEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeee-EEEEE
Confidence 3557888888874 2 89999988 7889999999999999999999999999999987663 46666
Q ss_pred EEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhhc
Q 027123 97 EFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEE 168 (228)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~~ 168 (228)
.+....... ........+|.+........ ++.|..+++|+++++++++...+..++++..+.+.++..
T Consensus 132 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~~ 199 (206)
T 3o8s_A 132 DKHKNNPAK---SAHRVTKVFILCRLLGGEFQ-PNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSE 199 (206)
T ss_dssp EHHHHCC--------CEEEEEEEEEEEEECCC-CCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCS
T ss_pred eccccCCCC---CCceEEEEEEEEEecCCeec-CCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHCC
Confidence 533221111 01234556777776544332 457899999999999999999899999999998876643
No 32
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.81 E-value=2.7e-19 Score=139.94 Aligned_cols=125 Identities=20% Similarity=0.202 Sum_probs=90.3
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCC----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccc-
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNR----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEK- 91 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~- 91 (228)
....+++++++..++ +|||++|... +.|.||||+++.||++.+||.||++||||+.+.....
T Consensus 27 ~~~~~~~~~i~~~~~-------------~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~ 93 (158)
T 3hhj_A 27 SLLIVVACALLDQDN-------------RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLF 93 (158)
T ss_dssp CEEEEEEEEEBCTTS-------------EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCE
T ss_pred ceEEEEEEEEEeCCC-------------EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEE
Confidence 344556666665433 8999998753 5799999999999999999999999999999776521
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHH
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKV 164 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~ 164 (228)
.++.+.+.... ....+++|.+..... .....|..+++|++++++.++...+.++.+++.+.+.
T Consensus 94 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 156 (158)
T 3hhj_A 94 PLTFASHGYET--------FHLLMPLYFCSHYKG--VAQGREGQNLKWIFINDLDKYPMPEADKPLVQVLKNF 156 (158)
T ss_dssp EEEEEEEECSS--------CEEEEEEEEESCCBS--CCCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHHC
T ss_pred EEEEEeeccCC--------cEEEEEEEEEEECCC--ccCCccccceEEEcHHHHhhCCCCcchHHHHHHHHHh
Confidence 13333322221 124556677655443 2235678899999999999999999999998887654
No 33
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.81 E-value=3e-20 Score=144.97 Aligned_cols=118 Identities=19% Similarity=0.149 Sum_probs=74.3
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEE
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWE 97 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~ 97 (228)
.+.+|++|+++.+ .+|||++|. .+.|.||||+++.|||+.+||+||++||||+.+.... .++.++
T Consensus 20 ~~~~v~~ii~~~~-------------~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~ 84 (153)
T 3eds_A 20 FXPSVAAVIKNEQ-------------GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKK-QKGVFG 84 (153)
T ss_dssp EEEEEEEEEBCTT-------------CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEE-EEEEEC
T ss_pred EeeeEEEEEEcCC-------------CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeee-EEEEec
Confidence 4556666666543 379998877 7889999999999999999999999999999987663 466552
Q ss_pred EeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcC
Q 027123 98 FRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCR 150 (228)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~ 150 (228)
..................++|.+..........+.|..+++|+++++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 85 GKEYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp SGGGEEECTTSCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBSS
T ss_pred ccceeeecCCCCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhcc
Confidence 11110000000011234567777765544333567888999999999998755
No 34
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.80 E-value=5.4e-19 Score=141.41 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=83.5
Q ss_pred eEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEE
Q 027123 45 EVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLE 121 (228)
Q Consensus 45 ~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 121 (228)
+|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+... ..++.+.+...... .....++|.+.
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~~~~~------~~~~~~~f~~~ 109 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDAL-HKVGQIVFEFVGEP------ELMDVHVFCTD 109 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCC-EEEEEEEEEETTCS------CEEEEEEEEES
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceee-EEEEEEEEEcCCCC------cEEEEEEEEEE
Confidence 899998865 477999999999999999999999999999998766 35777766544321 12445667665
Q ss_pred eCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHH
Q 027123 122 VTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMK 163 (228)
Q Consensus 122 ~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~ 163 (228)
...... ...+..+++|++++++..+...+..+.++..+++
T Consensus 110 ~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 149 (176)
T 3q93_A 110 SIQGTP--VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQ 149 (176)
T ss_dssp CEESCC--CCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHHT
T ss_pred CCCCCc--CCCcceeeEEeeHHHccccccCcchHHHHHHHHc
Confidence 333222 3446678899999999999888888888777655
No 35
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.80 E-value=6.2e-19 Score=137.47 Aligned_cols=115 Identities=22% Similarity=0.126 Sum_probs=85.4
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-------CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeec
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-------RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLN 89 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-------~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~ 89 (228)
-.+.++++|+++.++ +|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+...
T Consensus 11 ~~~~~~~~vi~~~~~-------------~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~ 77 (159)
T 1sjy_A 11 VELRAAGVVLLNERG-------------DILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPV 77 (159)
T ss_dssp CCEEEEEEEEBCTTC-------------CEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEE
T ss_pred eEEEeEEEEEEeCCC-------------CEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceee
Confidence 345677777776433 799999874 367999999999999999999999999999998766
Q ss_pred cccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccc-cCC-CCCcceeeEEEehhhHhhhcCch
Q 027123 90 EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEEL-EIW-PEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~-~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
..++.+.+..... .....++|.+...... ... .+.|+.++.|++++++.+++...
T Consensus 78 -~~l~~~~~~~~~~-------~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 78 -KFLGAYLGRFPDG-------VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp -EEEEEEEEECTTS-------CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred -EEEEEEecccCCC-------ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 3566665442211 2355677887775443 322 46788999999999999886543
No 36
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.80 E-value=1.5e-18 Score=137.35 Aligned_cols=135 Identities=18% Similarity=0.228 Sum_probs=91.4
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEE
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIW 96 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~ 96 (228)
.++.+|++|+++.++ +|||+++...+.|.+|||+++.|||+.+||.||++||||+.+... ..++.+
T Consensus 6 ~~~~~v~~~i~~~~~-------------~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~~~ 71 (164)
T 2kdv_A 6 GYRPNVGIVICNRQG-------------QVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDV-RILAST 71 (164)
T ss_dssp SEEEEEEEEEECTTS-------------EEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGE-EEEEEC
T ss_pred CCCcEEEEEEEccCC-------------EEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccce-EEEEEe
Confidence 578899999987543 899999988788999999999999999999999999999987654 235543
Q ss_pred E----EeeCCccc---CCCCCCcEEEEEEEEEeCccccC-----CCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHH
Q 027123 97 E----FRSKSKQD---LHSLEGGCRGYMFSLEVTEELEI-----WPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKV 164 (228)
Q Consensus 97 ~----~~~~~~~~---~~~~~~~~~~~~f~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~ 164 (228)
. |....... ..+.......++|.+.+...... .++.|+.+++|++++++.+.+.. ..+..+..++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~-~~~~~~~~~l~~ 150 (164)
T 2kdv_A 72 RNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVS-FKRDVYRRVMKE 150 (164)
T ss_dssp SSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCH-HHHHHHHHHHHH
T ss_pred cceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhh-hhHHHHHHHHHH
Confidence 2 22211110 00111234567888876543211 13458899999999998776442 224455555554
Q ss_pred Hh
Q 027123 165 MS 166 (228)
Q Consensus 165 l~ 166 (228)
+.
T Consensus 151 l~ 152 (164)
T 2kdv_A 151 FA 152 (164)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 37
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.80 E-value=4.5e-19 Score=136.04 Aligned_cols=127 Identities=17% Similarity=0.110 Sum_probs=91.4
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCC----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccc-c
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNR----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEK-P 92 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~-~ 92 (228)
...++++++++.++ +|||++|... +.|.||||+++.||++.+||.||++||||+.+..... .
T Consensus 7 ~~~~~~~vi~~~~~-------------~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~ 73 (144)
T 3r03_A 7 ILLVTAAALIDPDG-------------RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAP 73 (144)
T ss_dssp EEEEEEEEEBCTTS-------------CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEE
T ss_pred eeEEEEEEEEcCCC-------------EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEE
Confidence 34566666665433 7999998754 6799999999999999999999999999999776521 1
Q ss_pred ceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhh
Q 027123 93 LGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSE 167 (228)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~ 167 (228)
++.+.+... .....+++|.+...... ....|..+++|++++++.++...+.++.+++.+.+....
T Consensus 74 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 138 (144)
T 3r03_A 74 LAFASHSYD--------TFHLLMPLYACRSWRGR--ATAREGQTLAWVRAERLREYPMPPADLPLIPILQDWLEG 138 (144)
T ss_dssp EEEEEEECS--------SSEEEEEEEEECCCBSC--CCCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC--
T ss_pred EEeeeccCC--------CeEEEEEEEEEEecCCc--cCCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCcccc
Confidence 222222221 12245677777655432 235678899999999999999999888888887766543
No 38
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.80 E-value=1e-18 Score=137.58 Aligned_cols=112 Identities=17% Similarity=0.073 Sum_probs=76.4
Q ss_pred eEEEEEeCCC-----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceE-EE-----EeeCCcccCCCCCCcE
Q 027123 45 EVLMVSSPNR-----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGI-WE-----FRSKSKQDLHSLEGGC 113 (228)
Q Consensus 45 ~vLLv~~~~~-----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~-~~-----~~~~~~~~~~~~~~~~ 113 (228)
+|||+++... +.|.||||+++.|||+.+||+||++||||+.+.... .++. +. +....... .....
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~ 115 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSD-ITPWTFRDDIRIKTYADGRQ---EEIYM 115 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEE-EEEEEEEEEEEEEEC--CCE---EEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccc-eeeeeeecceeeEecCCCCc---eeEEE
Confidence 8999988743 679999999999999999999999999999876542 2221 10 11111100 00112
Q ss_pred EEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHH
Q 027123 114 RGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKF 161 (228)
Q Consensus 114 ~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 161 (228)
..++|.+........ .+.|..+++|++++++.++...+..+.+++.+
T Consensus 116 ~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~ 162 (165)
T 3oga_A 116 IYLIFDCVSANRDIC-INDEFQDYAWVKPEELALYDLNVATRHTLALK 162 (165)
T ss_dssp EEEEEEEEESCCCCC-CCTTEEEEEEECGGGGGGSCBCHHHHHHHHHT
T ss_pred EEEEEEeeccCCCcc-CCchheeeEEccHHHHhhCCCCHHHHHHHHHh
Confidence 334555554443332 45788999999999999998888888887653
No 39
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.80 E-value=5.5e-19 Score=139.98 Aligned_cols=106 Identities=18% Similarity=0.099 Sum_probs=77.1
Q ss_pred eEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCc
Q 027123 45 EVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTE 124 (228)
Q Consensus 45 ~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 124 (228)
+|||++++. +.|.||||+++.|||+.+||+||++||||+.+.... .++.+.++. ...++|.+...+
T Consensus 28 ~vLL~~r~~-g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~~~~~------------~~~~~f~~~~~~ 93 (163)
T 3f13_A 28 GVLVTASRG-GRYNLPGGKANRGELRSQALIREIREETGLRINSML-YLFDHITPF------------NAHKVYLCIAQG 93 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEE-EEEEEECSS------------EEEEEEEEEC-C
T ss_pred EEEEEEECC-CeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeE-EEEEEecCC------------eEEEEEEEEECC
Confidence 799998874 789999999999999999999999999999987663 355543321 334566666543
Q ss_pred cccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHhh
Q 027123 125 ELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSE 167 (228)
Q Consensus 125 ~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~~ 167 (228)
.. .+..|+.+++|++ .+.......+.++.++..+.+....
T Consensus 94 ~~--~~~~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~~~~~ 133 (163)
T 3f13_A 94 QP--KPQNEIERIALVS-SPDTDMDLFVEGRAILRRYARLRNE 133 (163)
T ss_dssp CC--CCCTTCCEEEEES-STTCSSCBCHHHHHHHHHHHHHTTC
T ss_pred cC--ccCCCceEEEEEC-cccccCCCCHHHHHHHHHHHHhhhc
Confidence 22 2445889999999 5555556667889999888876543
No 40
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.80 E-value=5.2e-19 Score=139.17 Aligned_cols=126 Identities=22% Similarity=0.204 Sum_probs=93.2
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCC---CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNR---SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~---~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
..+.+++||+++.+ ..+|||++|... +.|.||||+++.|||+.+||+||++||||+.+... ..+
T Consensus 8 ~~~~~v~~vi~~~~------------~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~ 74 (161)
T 3exq_A 8 PVELVTMVMVTDPE------------TQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGV-TFC 74 (161)
T ss_dssp CEEEEEEEEEBCTT------------TCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCC-EEE
T ss_pred CceEEEEEEEEeCC------------CCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCC-cEE
Confidence 45667777777644 238999988743 45889999999999999999999999999998766 357
Q ss_pred eEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHH
Q 027123 94 GIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMK 163 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~ 163 (228)
+.+.+...... .....++|.+...... ....|..+++|++++++.++...+.++.++..+++
T Consensus 75 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 75 GTCEWFDDDRQ------HRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp EEEEEECSSCS------SEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred EEEecccCCCC------eEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 77765543221 1244566666543322 23456778999999999999888888888887766
No 41
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.80 E-value=1.7e-18 Score=132.01 Aligned_cols=109 Identities=19% Similarity=0.202 Sum_probs=84.1
Q ss_pred eEEEEEeCC----CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEE
Q 027123 45 EVLMVSSPN----RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSL 120 (228)
Q Consensus 45 ~vLLv~~~~----~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 120 (228)
+|||+++.. .+.|.||||+++.|||+.+||.||++||||+.+... ..++.+.+..... ...+++|.+
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~ 91 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG-EYVASHQREVSGR--------IIHLHAWHV 91 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC-EEEEEEEEEETTE--------EEEEEEEEE
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc-cEEEEEEEecCCc--------EEEEEEEEE
Confidence 799999865 377999999999999999999999999999998765 3466665443321 134566666
Q ss_pred EeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHH
Q 027123 121 EVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKV 164 (228)
Q Consensus 121 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~ 164 (228)
...... ....|+.+++|++++++.++...+.++.+++.+++.
T Consensus 92 ~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 133 (140)
T 2rrk_A 92 PDFHGT--LQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMAL 133 (140)
T ss_dssp SEEEEC--CCCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHH
T ss_pred EeeCCC--cCCCccceeEEeCHHHHhhCCCChhHHHHHHHHHHH
Confidence 543322 234577889999999999998888899999888765
No 42
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.79 E-value=2.1e-18 Score=134.19 Aligned_cols=127 Identities=20% Similarity=0.207 Sum_probs=89.6
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCC--CeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccce
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRS--DLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLG 94 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~ 94 (228)
..+.+|+||+++.++ ++..|||++|...+ .|.||||+++.|||+.+||+||++||||+.+... ..++
T Consensus 6 ~~~~~~~~ii~~~~~----------~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~ 74 (155)
T 2b06_A 6 LTILTNICLIEDLET----------QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNP-QLVG 74 (155)
T ss_dssp CEEEEEEEEEEETTT----------TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC-EEEE
T ss_pred CcEEEEEEEEEECCC----------CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCC-cEEE
Confidence 456788888887543 34458888776532 2799999999999999999999999999998765 3566
Q ss_pred EEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHH
Q 027123 95 IWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMK 163 (228)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~ 163 (228)
.+.+..... .....++|.+...... ....|..+++|++++++..+...++++.+++.+..
T Consensus 75 ~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 134 (155)
T 2b06_A 75 IKNWPLDTG-------GRYIVICYKATEFSGT--LQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEA 134 (155)
T ss_dssp EEEEECTTS-------CEEEEEEEEECEEEEC--CCCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHHC
T ss_pred EEeeccCCC-------ceEEEEEEEEEecCCC--CCCCcceeeEEeeHHHhhhCCCChhHHHHHHHHhC
Confidence 665543211 1244566666543322 23467889999999999999888888888876554
No 43
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.79 E-value=3.3e-18 Score=139.29 Aligned_cols=148 Identities=16% Similarity=0.204 Sum_probs=92.7
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC--CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccce
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN--RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLG 94 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~--~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~ 94 (228)
..+.+|++++++..+ .+|||++++. .+.|.||||+++.|||+.+||+||++||||+.+... ..++
T Consensus 24 ~~~v~v~~~v~~~~~------------~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~-~l~~ 90 (199)
T 3h95_A 24 SHQVGVAGAVFDEST------------RKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFR-SVLS 90 (199)
T ss_dssp --CCEEEEEEEETTT------------TEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEE
T ss_pred cccceEEEEEEeCCC------------CEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccc-eEEE
Confidence 455677778887542 3899999876 578999999999999999999999999999998755 3344
Q ss_pred EEE-EeeCCcccCCCCCCcEEEEEEEEEeC--ccccCCCCCcceeeEEEehhhHhhhcCchHH-HHHHHHHHHHHhhccc
Q 027123 95 IWE-FRSKSKQDLHSLEGGCRGYMFSLEVT--EELEIWPEQENRYRKWLNIQDAFQLCRYEWM-REALEKFMKVMSEEQK 170 (228)
Q Consensus 95 ~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~-~~~l~~~l~~l~~~~~ 170 (228)
... +...... .....+|.+.+. .......+.|..+++|++++++.++...... +.++..++...+...
T Consensus 91 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~- 162 (199)
T 3h95_A 91 IRQQHTNPGAF-------GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGF- 162 (199)
T ss_dssp EEECC----------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHHHHHHHHHHHHHHHCG-
T ss_pred EEeeecCCCCc-------eeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHHHHHHHHHHhhhhcCC-
Confidence 322 1111110 112234444432 2222334678999999999999987554333 333333333333222
Q ss_pred cccceeeecCCCCCCCCcccccccccc
Q 027123 171 VEITEEIVEPLPKPVPDVIAECQIVSS 197 (228)
Q Consensus 171 ~~~~~~~v~~~~lp~~~~~~e~~~~~~ 197 (228)
.+.++++.+++.+..
T Consensus 163 ------------~~~~~~~~~L~~v~~ 177 (199)
T 3h95_A 163 ------------DKIDLTVEELPAVYT 177 (199)
T ss_dssp ------------GGTCEEEEEEECSSS
T ss_pred ------------CcccccHHHHHHHHh
Confidence 133677888887664
No 44
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.79 E-value=4e-18 Score=136.00 Aligned_cols=126 Identities=23% Similarity=0.184 Sum_probs=89.4
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCeEe-cccccCCCCCHHHHHHHHHHHHhceeeeeccc
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDLVF-PKGGWENDETVMEAACREALEEAGVRGKLNEK 91 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W~l-PgG~ie~gEt~~eAA~REl~EETGl~~~~~~~ 91 (228)
...++++++++.++ +|||.+|.. .|.|.| |||+++.|||+.+||+||++||||+.+....
T Consensus 36 ~~~~~~v~i~~~~~-------------~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~- 101 (180)
T 2fkb_A 36 RHRATYIVVHDGMG-------------KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFA- 101 (180)
T ss_dssp CEEEEEEEEECSSS-------------CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCE-
T ss_pred eeeEEEEEEECCCC-------------EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceE-
Confidence 34466666665433 799988864 356999 9999999999999999999999999865542
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhc--CchHHHHHHHHHHHHHh
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC--RYEWMREALEKFMKVMS 166 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~--~~~~~~~~l~~~l~~l~ 166 (228)
.++.+.+..... ....++|.+..... ....+.|+.+++|++++++.+++ ..+.++.++..++....
T Consensus 102 ~l~~~~~~~~~~--------~~~~~~f~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~ 169 (180)
T 2fkb_A 102 EHGQFYFEDKNC--------RVWGALFSCVSHGP-FALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNA 169 (180)
T ss_dssp EEEEEEEEETTE--------EEEEEEEEEECCCC-CCCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC-
T ss_pred EEEEEEecCCCc--------eEEEEEEEEecCCC-cCCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhc
Confidence 466665443221 23456677764332 22346788999999999999983 45777888877766543
No 45
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.79 E-value=6.4e-19 Score=137.11 Aligned_cols=115 Identities=13% Similarity=0.197 Sum_probs=82.6
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEE
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIW 96 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~ 96 (228)
.++.++++|+++.+ +|||+++ .+.|.||||+++.|||+.+||+||++||||+.+... ..++.+
T Consensus 17 ~~~~~~~~ii~~~~--------------~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~~ 79 (154)
T 2pqv_A 17 VFGVRATALIVQNH--------------KLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAG-QLAFVV 79 (154)
T ss_dssp EEEEEEEECCEETT--------------EEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEE-EEEEEE
T ss_pred eEeEEEEEEEEECC--------------EEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeec-eEEEEE
Confidence 46678888888632 7999998 678999999999999999999999999999998765 345555
Q ss_pred EEeeCCcccCCCCCCcEEEEEEEEEeCccccC--CCCCcceeeEEEehhhHhhhcCch
Q 027123 97 EFRSKSKQDLHSLEGGCRGYMFSLEVTEELEI--WPEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
.+....... ......++|.+........ .++.|..+++|++++++..+...+
T Consensus 80 ~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~ 133 (154)
T 2pqv_A 80 ENRFEVDGV----SYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVP 133 (154)
T ss_dssp EEEEEETTE----EEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEES
T ss_pred eeeecCCCC----cceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCc
Confidence 433221110 1123445677776543221 235568899999999999976555
No 46
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.78 E-value=1.4e-18 Score=136.02 Aligned_cols=138 Identities=19% Similarity=0.230 Sum_probs=90.7
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc-
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL- 93 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l- 93 (228)
..++.+|++++++.++ +|||+++.. .+.|.+|||+++.|||+.+||+||++||||+.+.......
T Consensus 11 ~~~~~~v~~~i~~~~~-------------~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 77 (165)
T 1f3y_A 11 EGYRRNVGICLMNNDK-------------KIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVP 77 (165)
T ss_dssp SSCCCEEEEEEECTTS-------------CEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECS
T ss_pred cceeeeEEEEEECCCC-------------cEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccc
Confidence 4678899999986543 899999875 3679999999999999999999999999999864221000
Q ss_pred --eEEEEeeCCc----ccCCCCCCcEEEEEEEEEeCcccc--CC-----CCCcceeeEEEehhhHhhhcCchHHHHHHHH
Q 027123 94 --GIWEFRSKSK----QDLHSLEGGCRGYMFSLEVTEELE--IW-----PEQENRYRKWLNIQDAFQLCRYEWMREALEK 160 (228)
Q Consensus 94 --~~~~~~~~~~----~~~~~~~~~~~~~~f~~~~~~~~~--~~-----~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 160 (228)
..+.+..... .............+|.+.+..... .. ++.|..+++|++++++.+++.. ..+..+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~~ 156 (165)
T 1f3y_A 78 YWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVE-FKKPVYKE 156 (165)
T ss_dssp SCCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCG-GGHHHHHH
T ss_pred cceeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhh-hhHHHHHH
Confidence 1111111000 000000111234667776654321 11 3568899999999999998764 35667777
Q ss_pred HHHHHhh
Q 027123 161 FMKVMSE 167 (228)
Q Consensus 161 ~l~~l~~ 167 (228)
++..++.
T Consensus 157 ~~~~l~~ 163 (165)
T 1f3y_A 157 VLSVFAP 163 (165)
T ss_dssp HHHHHGG
T ss_pred HHHHhhh
Confidence 7777654
No 47
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.77 E-value=3e-18 Score=138.28 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=90.0
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCeEe-cccccCCCCCHHHHHHHHHHHHhceeeeeccc
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDLVF-PKGGWENDETVMEAACREALEEAGVRGKLNEK 91 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W~l-PgG~ie~gEt~~eAA~REl~EETGl~~~~~~~ 91 (228)
...+|++++++.++ +|||++|.. .+.|.+ |||+++.|||+.+||+||++||||+.+.....
T Consensus 31 ~~~~v~~~i~~~~g-------------~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~ 97 (190)
T 1hzt_A 31 LHLAFSSWLFNAKG-------------QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPES 97 (190)
T ss_dssp CEECEEEEEECTTC-------------CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEE
T ss_pred eEEEEEEEEEcCCC-------------EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhe
Confidence 44577888886433 799998864 367999 99999999999999999999999998765412
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhc------CchHHHHHHHHHHHHH
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLC------RYEWMREALEKFMKVM 165 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~------~~~~~~~~l~~~l~~l 165 (228)
.++.+.+....... .......++|.+...... ...+.|..+++|++++++.+++ ..++.+.+++.++++.
T Consensus 98 ~~~~~~~~~~~~~~---~~~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~ 173 (190)
T 1hzt_A 98 IYPDFRYRATDPSG---IVENEVCPVFAARTTSAL-QINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARK 173 (190)
T ss_dssp EETTCEEEEECTTS---CEEEEECCEEEEEBCSCC-CCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHH
T ss_pred eeeeEEEEeeCCCC---CcceEEEEEEEEecCCCC-cCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHH
Confidence 34444443221110 001234466777765432 2246788999999999998873 5566677777766554
No 48
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.76 E-value=3.2e-18 Score=149.53 Aligned_cols=129 Identities=17% Similarity=0.220 Sum_probs=86.0
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
..+.+|++|+++.+ +|||++++. .+.|.+|||+++.|||+++||+||++||||+++.... .+
T Consensus 201 ~~~~~v~~vi~~~~--------------~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~ 265 (341)
T 2qjo_A 201 PTFITTDAVVVQAG--------------HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPV-LR 265 (341)
T ss_dssp CCEEEEEEEEEETT--------------EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHH-HH
T ss_pred CCceEEEEEEEeCC--------------EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCcccccc-cc
Confidence 45678888888532 799999875 5779999999999999999999999999999976542 23
Q ss_pred e----EEEEeeCCcccCCCCCCcEEEEEEEEEeCcccc--CCCCCcceeeEEEehhhHhhh--cCchHHHHHHHHHHHH
Q 027123 94 G----IWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELE--IWPEQENRYRKWLNIQDAFQL--CRYEWMREALEKFMKV 164 (228)
Q Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~~~e~~~~~W~~~~el~~~--~~~~~~~~~l~~~l~~ 164 (228)
+ ...+....... .......+|.+....... ..++.|..+++|++++++.++ ...++++.++..++..
T Consensus 266 ~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 266 GSIVDSHVFDAPGRSL----RGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp HTEEEEEEECCTTSCT----TSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred ccccceEEEeCCCCCC----CCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 2 12222211110 112344566666543321 134578899999999999997 6778899999887654
No 49
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.76 E-value=6.3e-18 Score=130.69 Aligned_cols=111 Identities=22% Similarity=0.185 Sum_probs=71.2
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCC----CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccce
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN----RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLG 94 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~----~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~ 94 (228)
+.+|++|+++.++ +|||++++. .+.|.||||++++|||+.+||+||++||||+.+.... .++
T Consensus 5 ~~~v~vi~~~~~~-------------~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~-~l~ 70 (145)
T 2w4e_A 5 PRAVFILPVTAQG-------------EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWV-PLP 70 (145)
T ss_dssp CEEEEEEEEETTS-------------EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEE-ECC
T ss_pred CCEEEEEEEcCCC-------------EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEE-EEe
Confidence 4577888886543 788886532 2269999999999999999999999999999976542 344
Q ss_pred EEEEeeCCcccCCCCCCcEEEEEEEEE-eCccccCCCCCcceeeEEEehhhHhhhcCc
Q 027123 95 IWEFRSKSKQDLHSLEGGCRGYMFSLE-VTEELEIWPEQENRYRKWLNIQDAFQLCRY 151 (228)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~f~~~-~~~~~~~~~~~e~~~~~W~~~~el~~~~~~ 151 (228)
.+ +.... .....+++|.+. .........+.|..+++|++++++.+++..
T Consensus 71 ~~-~~~~~-------~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 71 GF-YPQPS-------ISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp CB-BSCTT-------TCCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHH
T ss_pred cC-cCCCC-------ccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHc
Confidence 32 11100 111234555554 222222234678899999999999987653
No 50
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.3e-18 Score=134.13 Aligned_cols=111 Identities=17% Similarity=0.191 Sum_probs=76.3
Q ss_pred EEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEee
Q 027123 21 VSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRS 100 (228)
Q Consensus 21 ~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~ 100 (228)
++++++++.. ..+|||+++...+.|.||||+++.|||+.+||+||++||||+.+.... .+..+....
T Consensus 6 ~~~~~i~~~~------------~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~-~~~~~~~~~ 72 (146)
T 2jvb_A 6 VRGAAIFNEN------------LSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYI-DDNQFIERN 72 (146)
T ss_dssp CEEEEEBCTT------------SSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSS-CSSCEEEEE
T ss_pred EEEEEEEeCC------------CCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhc-ccccccccc
Confidence 5677787653 238999998877899999999999999999999999999999876432 233222111
Q ss_pred CCcccCCCCCCcEEEEEEEEEe-Cc--cccCCCCCcceeeEEEehhhHhhhcCchH
Q 027123 101 KSKQDLHSLEGGCRGYMFSLEV-TE--ELEIWPEQENRYRKWLNIQDAFQLCRYEW 153 (228)
Q Consensus 101 ~~~~~~~~~~~~~~~~~f~~~~-~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~~ 153 (228)
... ....+|.+.. .. .....++.|+.+++|++++++..++....
T Consensus 73 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 119 (146)
T 2jvb_A 73 IQG---------KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKSN 119 (146)
T ss_dssp ETT---------EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCSS
T ss_pred cCC---------ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcccc
Confidence 100 1233444332 21 11222467889999999999999876543
No 51
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.76 E-value=6.8e-19 Score=132.30 Aligned_cols=106 Identities=19% Similarity=0.193 Sum_probs=79.1
Q ss_pred eEEEEEeCCC----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEE
Q 027123 45 EVLMVSSPNR----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSL 120 (228)
Q Consensus 45 ~vLLv~~~~~----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 120 (228)
+|||++++.. +.|.||||+++.|||+.+||.||++||||+.+.... .++.+.+... .....+++|.+
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~ 87 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFS-LFEKLEYEFP--------DRHITLWFWLV 87 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEEC-CCCCCBCCCS--------SCEEECCCEEE
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccce-EEEEEEEecC--------CceEEEEEEEE
Confidence 8999998764 779999999999999999999999999999976653 3554432211 11234456777
Q ss_pred EeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHH
Q 027123 121 EVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKF 161 (228)
Q Consensus 121 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 161 (228)
....... ...|..+++|++++++.++...+.++.+++.+
T Consensus 88 ~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 88 ERWEGEP--WGKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp EECSSCC--CCCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred EccCCcc--CCcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 6554322 34577889999999999988888777777654
No 52
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.75 E-value=1e-17 Score=147.12 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=91.7
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
..+.+|++|+++.+ +|||++++. .+.|.||||++++|||+++||+||++||||+++.... .+
T Consensus 206 ~~~~~v~~vv~~~~--------------~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~-~~ 270 (352)
T 2qjt_B 206 PNFVTVDALVIVND--------------HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQ-LA 270 (352)
T ss_dssp CEEEEEEEEEEETT--------------EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHH-HH
T ss_pred CCceEEEEEEEECC--------------EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccch-hc
Confidence 44567888888532 799999875 3679999999999999999999999999999876432 12
Q ss_pred e----EEEEeeCCcccCCCCCCcEEEEEEEEEeCccc--c-CCCCCcceeeEEEeh-hhHhhh--cCchHHHHHHHHHHH
Q 027123 94 G----IWEFRSKSKQDLHSLEGGCRGYMFSLEVTEEL--E-IWPEQENRYRKWLNI-QDAFQL--CRYEWMREALEKFMK 163 (228)
Q Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~-~~~~~e~~~~~W~~~-~el~~~--~~~~~~~~~l~~~l~ 163 (228)
+ ...+....... .......+|.+.+.... . ..++.|+.+++|+++ +++.++ ..+++++.+++.++.
T Consensus 271 ~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~ 346 (352)
T 2qjt_B 271 IAKRCEKVFDYPDRSV----RGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLE 346 (352)
T ss_dssp HHEEEEEEECCTTSCT----TSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHH
T ss_pred ceeeeeEEecCCCCCC----CccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHH
Confidence 1 11222111100 11223445555554332 1 124678999999999 999997 778899999999998
Q ss_pred HH
Q 027123 164 VM 165 (228)
Q Consensus 164 ~l 165 (228)
++
T Consensus 347 ~l 348 (352)
T 2qjt_B 347 EC 348 (352)
T ss_dssp HT
T ss_pred Hh
Confidence 87
No 53
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.74 E-value=2.4e-17 Score=140.70 Aligned_cols=113 Identities=19% Similarity=0.122 Sum_probs=84.4
Q ss_pred eEEEEEeCC--CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEe
Q 027123 45 EVLMVSSPN--RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEV 122 (228)
Q Consensus 45 ~vLLv~~~~--~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 122 (228)
+|||+++.. .+.|.||||++|.|||+++||+||++||||+++.... .++.+.+.... ..+.+|.+.+
T Consensus 152 ~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~-~~~~~~~~~~~----------~~~~~f~a~~ 220 (269)
T 1vk6_A 152 SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLR-YVTSQPWPFPQ----------SLMTAFMAEY 220 (269)
T ss_dssp EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEE-EEEEEEEETTE----------EEEEEEEEEE
T ss_pred EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEE-EEEEEecCCCC----------EEEEEEEEEE
Confidence 899999875 4679999999999999999999999999999987663 46655433211 2345666665
Q ss_pred CccccCCCCCcceeeEEEehhhHhhhcCchH-HHHHHHHHHHHHhhc
Q 027123 123 TEELEIWPEQENRYRKWLNIQDAFQLCRYEW-MREALEKFMKVMSEE 168 (228)
Q Consensus 123 ~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~-~~~~l~~~l~~l~~~ 168 (228)
........+.|..+++|+++++++.+..... .+.+++.++..+++.
T Consensus 221 ~~~~~~~~~~E~~~~~W~~~~el~~l~~~~si~~~li~~~l~~~r~~ 267 (269)
T 1vk6_A 221 DSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAE 267 (269)
T ss_dssp EECCCCCCTTTEEEEEEEETTSCCSCCCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCcCCCCcceEEEEEEEHHHhhhcccCcHHHHHHHHHHHHHHHhh
Confidence 4433333456899999999999998765443 367888888877643
No 54
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.74 E-value=3.1e-17 Score=141.59 Aligned_cols=145 Identities=13% Similarity=0.116 Sum_probs=92.9
Q ss_pred cEEEEEEEEEeccCCCcccccc----cCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHhceeee------
Q 027123 18 FRLVSGCIPYRLTKDAEDENED----TQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGK------ 87 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~----~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~------ 87 (228)
...++.+|+.++..+.++..-- -.+.++|||+++...+.|.||||+|+.|||+.+||+||++||||+.+.
T Consensus 109 p~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~ 188 (292)
T 1q33_A 109 PNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEK 188 (292)
T ss_dssp EEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHH
T ss_pred ccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccc
Confidence 4458888888864221111000 124579999999888899999999999999999999999999999731
Q ss_pred -----eccccc---eE--EEEeeCCcccCCCCCCcEEEEEEEEEeCcc-----ccCCCCCcceeeEEEehhhHhhhcCch
Q 027123 88 -----LNEKPL---GI--WEFRSKSKQDLHSLEGGCRGYMFSLEVTEE-----LEIWPEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 88 -----~~~~~l---~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-----~~~~~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
...+.+ +. |......... .+.......+|.+..... ....++.|+.+++|+++++++++ .+
T Consensus 189 ~~l~~~l~~l~~~~g~~vy~~~~~dpr~--~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~~ 264 (292)
T 1q33_A 189 REIEEKLHKLFSQDHLVIYKGYVDDPRN--TDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--YA 264 (292)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEECCCTTC--CSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--ST
T ss_pred hhhHHHHHHHhhcccceeecccccCCCC--CcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc--CH
Confidence 122222 22 2211111111 001122334454444321 12234678899999999999874 55
Q ss_pred HHHHHHHHHHHHHh
Q 027123 153 WMREALEKFMKVMS 166 (228)
Q Consensus 153 ~~~~~l~~~l~~l~ 166 (228)
+++.+|.++++.+.
T Consensus 265 ~h~~il~~~~~~~~ 278 (292)
T 1q33_A 265 SHSQFIKLVAEKRD 278 (292)
T ss_dssp THHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhc
Confidence 89999999988764
No 55
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.74 E-value=4.5e-18 Score=136.14 Aligned_cols=123 Identities=21% Similarity=0.101 Sum_probs=82.6
Q ss_pred Ccc-cccCCCCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC----CCCeEecccccCCCCCHHHHHHHHHHHHh
Q 027123 8 GRL-RQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN----RSDLVFPKGGWENDETVMEAACREALEEA 82 (228)
Q Consensus 8 gr~-~~~~~~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~----~~~W~lPgG~ie~gEt~~eAA~REl~EET 82 (228)
|+. ..++....+.+|++++++.++ +|||+++.. .+.|.||||+++.|||+.+||+||++|||
T Consensus 29 g~~~~~~~~~~~~~~v~v~i~~~~~-------------~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEt 95 (182)
T 2yvp_A 29 GRELTYVYRPGPVAASFVLPVTERG-------------TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEV 95 (182)
T ss_dssp SCEEEEEEBCSSCEEEEEEEBCTTS-------------EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCEeeEEEEEecCCEEEEEEEcCCC-------------EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHh
Confidence 444 333333445577777776443 799998753 35699999999999999999999999999
Q ss_pred ceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCc--cccCCCCCcceeeEEEehhhHhhhcCch
Q 027123 83 GVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTE--ELEIWPEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 83 Gl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
|+.+.... .++.+.... ......+++|.+.... ......+.|..+++|++++++.+++..+
T Consensus 96 Gl~~~~~~-~l~~~~~~~--------~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 96 GAEAETLI-PLPSFHPQP--------SFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp CEECSCEE-ECCCBCSCT--------TTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred CCCcccEE-EEEEEeCCC--------CccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 99976542 344331110 0112345666665332 1122356788999999999999986544
No 56
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.72 E-value=2.5e-17 Score=130.30 Aligned_cols=125 Identities=16% Similarity=0.116 Sum_probs=82.8
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCeE-ecccccCCCCCHHHHHHHHHHHHhceeeeecc-c
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDLV-FPKGGWENDETVMEAACREALEEAGVRGKLNE-K 91 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W~-lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~-~ 91 (228)
..++++++++.++ +|||++|.. .+.|. ||||+++.|||+.+||+||++||||+.+.... .
T Consensus 34 ~~~v~v~i~~~~~-------------~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~ 100 (171)
T 1q27_A 34 VRVVNAFLRNSQG-------------QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWR 100 (171)
T ss_dssp CEEEEEEEEETTT-------------EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEE
T ss_pred ceEEEEEEECCCC-------------eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceE
Confidence 5677777777543 899988743 36798 99999999999999999999999999876532 1
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcC--chHHHHHHHHHHHHH
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCR--YEWMREALEKFMKVM 165 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~--~~~~~~~l~~~l~~l 165 (228)
.++.+. +..... ....++|.+..... ....+.|+.+++|++++++.++.. .+....++..+.+.+
T Consensus 101 ~~~~~~-~~~~~~-------~~~~~~f~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~~~ 167 (171)
T 1q27_A 101 PLASFS-PFQTTL-------SSFMCVYELRSDAT-PIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRCY 167 (171)
T ss_dssp EEEEEC-SSSSCC-------SSEEEEEEEECCCC-CCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred EEEEEe-ccCCCC-------ccEEEEEEEEECCc-cccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHHHH
Confidence 233322 011110 12556777776322 222456888999999999996532 223345555544433
No 57
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.72 E-value=1.7e-17 Score=134.25 Aligned_cols=116 Identities=17% Similarity=0.120 Sum_probs=82.5
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeecc
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNE 90 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~ 90 (228)
+..+.++++|++..+ ++.+|||+++.. .+.|.||||+++.|||+.+||+||++||||+++....
T Consensus 31 ~~~~~~~~~v~i~~~-----------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~ 99 (194)
T 1nqz_A 31 PHYRRAAVLVALTRE-----------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVT 99 (194)
T ss_dssp --CEEEEEEEEEESS-----------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCE
T ss_pred CCCceEEEEEEEecC-----------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceE
Confidence 356778888887432 345899999864 4779999999999999999999999999999876552
Q ss_pred ccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccc--cCCCCCcceeeEEEehhhH-hhhcCc
Q 027123 91 KPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEEL--EIWPEQENRYRKWLNIQDA-FQLCRY 151 (228)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~el-~~~~~~ 151 (228)
.++.+.+..... ...+++|.+.+.... ....+.|+.+++|++++++ .+...+
T Consensus 100 -~l~~~~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 154 (194)
T 1nqz_A 100 -LLGELDDVFTPV--------GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLVR 154 (194)
T ss_dssp -EEEECCCEEETT--------TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCCEE
T ss_pred -EEEEccCccCCC--------CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCCcc
Confidence 455543322211 245667777765332 2335678899999999999 776553
No 58
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.72 E-value=2.3e-17 Score=130.66 Aligned_cols=111 Identities=21% Similarity=0.154 Sum_probs=74.1
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC----CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccc
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN----RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPL 93 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~----~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l 93 (228)
.+.+|++++++ ++ +|||+++.. .+.|.||||++++|||+.+||.||++||||+ +.... .+
T Consensus 33 ~~~~v~vii~~-~~-------------~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~-~l 96 (170)
T 1v8y_A 33 HKPAVAVIALR-EG-------------RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLT-YL 96 (170)
T ss_dssp ECCEEEEEEEE-TT-------------EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEE-EE
T ss_pred cCCeEEEEEEE-CC-------------EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCce-ee
Confidence 34578888888 43 899998743 3579999999999999999999999999999 76553 45
Q ss_pred eEEEEeeCCcccCCCCCCcEEEEEEEEEeCc-cccCCCCCcceeeEEEehhhHhhhcCch
Q 027123 94 GIWEFRSKSKQDLHSLEGGCRGYMFSLEVTE-ELEIWPEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
+.+..... . ....+++|.+.... ......+.|..+++|++++++.+++..+
T Consensus 97 ~~~~~~~~-~-------~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 97 FSYFVSPG-F-------TDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp EEEESCTT-T-------BCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTT
T ss_pred EEEecCCC-c-------cccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 54421111 1 12345666665433 2222245688999999999999986544
No 59
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.71 E-value=1.9e-17 Score=135.68 Aligned_cols=123 Identities=16% Similarity=0.069 Sum_probs=76.5
Q ss_pred CcccccCCCCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC----CCCeEecccccC-CCCCHHHHHHHHHHHHh
Q 027123 8 GRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN----RSDLVFPKGGWE-NDETVMEAACREALEEA 82 (228)
Q Consensus 8 gr~~~~~~~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~----~~~W~lPgG~ie-~gEt~~eAA~REl~EET 82 (228)
|+...++.-..+.+|++++++.++ +|||+++.. .+.|.||||+++ .|||+.+||+||++|||
T Consensus 32 G~~~~~~~~~~~~av~v~i~~~~~-------------~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEt 98 (207)
T 1mk1_A 32 GGIVTREVVEHFGAVAIVAMDDNG-------------NIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEV 98 (207)
T ss_dssp --CEEEEEEEECCEEEEEECCTTS-------------EEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCEEEEEEEcCCC-------------EEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHH
Confidence 444333332333467777776433 899998653 346999999999 99999999999999999
Q ss_pred ceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccC---CCCCcceeeEEEehhhHhhhcCch
Q 027123 83 GVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEI---WPEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 83 Gl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
|+.+.... .++.+ +..... ....+++|.+........ ..+.|+.++.|++++++.+++...
T Consensus 99 Gl~~~~~~-~l~~~-~~~~~~-------~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 99 GLQASTWQ-VLVDL-DTAPGF-------SDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp CEEEEEEE-EEEEE-CSCTTT-------BCCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred CCcccccE-EEEEE-EcCCCc-------cccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 99987653 45544 221111 012345666654332221 235678899999999999987654
No 60
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.71 E-value=6.5e-17 Score=133.14 Aligned_cols=113 Identities=14% Similarity=0.076 Sum_probs=77.6
Q ss_pred CCCCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCC-------CCeEe-cccccCCCCC--H----HHHHHHHHH
Q 027123 14 YDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNR-------SDLVF-PKGGWENDET--V----MEAACREAL 79 (228)
Q Consensus 14 ~~~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~-------~~W~l-PgG~ie~gEt--~----~eAA~REl~ 79 (228)
+++.+++.+..+++..++ +|||++|... +.|.+ |||+||+||| + ++||+||++
T Consensus 62 ~d~~~~q~i~~~II~~~g-------------rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~ 128 (211)
T 3e57_A 62 YDETTKQVIPYVVIMDGD-------------RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVN 128 (211)
T ss_dssp TCTTEEEEEEEEEEEETT-------------EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEEEEEECC-------------EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHH
Confidence 345677777666666543 8999998643 46888 9999999999 4 999999999
Q ss_pred HHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhh
Q 027123 80 EEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQL 148 (228)
Q Consensus 80 EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 148 (228)
||||+++... ..++.+.+...... .....++|.+...... ..+.+..+++|+++++++++
T Consensus 129 EEtGl~v~~~-~~ig~~~~~~~~~~------~~~l~~~f~~~~~~g~--~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 129 EEVDVSLREL-EFLGLINSSTTEVS------RVHLGALFLGRGKFFS--VKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp HHEEEEEEEE-EEEEEEECCSSHHH------HTEEEEEEEEEEEEEE--ESCTTTCEEEEEEHHHHHHH
T ss_pred HHhCCeeecc-EEEEEEeccCCCCC------eEEEEEEEEEEeCCce--eCCCCeEEEEEEEHHHHHHh
Confidence 9999987766 35676654221111 1123346777654332 24567789999999999997
No 61
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.70 E-value=1.3e-16 Score=130.12 Aligned_cols=100 Identities=18% Similarity=0.059 Sum_probs=71.3
Q ss_pred eEEEEEeCCC----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEE
Q 027123 45 EVLMVSSPNR----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSL 120 (228)
Q Consensus 45 ~vLLv~~~~~----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 120 (228)
+|||+++... +.|.||||++++|||+++||+||++||||+.+.... .++.+....... ...+++|.+
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~-~l~~~~~~~~~~--------~~~~~~f~a 131 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLT-FLKKLSMAPSYF--------SSKMNIVVA 131 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEEEECCTTTC--------CCEEEEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceE-EEEEEeCCCCcc--------CcEEEEEEE
Confidence 8999976432 359999999999999999999999999999987653 466554221111 123456666
Q ss_pred EeCcc-ccCCCCCcceeeEEEehhhHhhhcCchH
Q 027123 121 EVTEE-LEIWPEQENRYRKWLNIQDAFQLCRYEW 153 (228)
Q Consensus 121 ~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~ 153 (228)
..... .....+.|..++.|++++++.+++....
T Consensus 132 ~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 165 (198)
T 1vhz_A 132 QDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPD 165 (198)
T ss_dssp EEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCTT
T ss_pred EeCCcccCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 54322 2222456788999999999999877553
No 62
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.70 E-value=9.6e-17 Score=125.03 Aligned_cols=125 Identities=16% Similarity=0.185 Sum_probs=85.8
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCC----CCeEecccccCCCCCHH-HHHHHHHHHHhc-eeeeeccc
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNR----SDLVFPKGGWENDETVM-EAACREALEEAG-VRGKLNEK 91 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~W~lPgG~ie~gEt~~-eAA~REl~EETG-l~~~~~~~ 91 (228)
.+..+.+|+.+..+ .+.+|||++|... |.|.||||+++.||++. +||+||++|||| +.+....
T Consensus 18 ~~~~~~~vi~~~~~----------~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~- 86 (155)
T 1x51_A 18 EESSATCVLEQPGA----------LGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR- 86 (155)
T ss_dssp EEEEEEEEEEEECS----------SSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCE-
T ss_pred eEEEEEEEEEecCC----------CCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeee-
Confidence 45556666666421 1248999998754 67999999999999996 999999999999 7654332
Q ss_pred cceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHH
Q 027123 92 PLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMK 163 (228)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~ 163 (228)
.++.+.+... .....+++|.+.+..... ...+..+++|++++++.++...+.++.++..++.
T Consensus 87 ~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 87 HLGEVVHTFS--------HIKLTYQVYGLALEGQTP--VTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp ECCCBCCBCS--------SCEEEEEEEEEECSSCCC--CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHH
T ss_pred ecceEEEecC--------CccEEEEEEEEEEcCCCC--CCCCCCccEEccHHHhhhcCCCHHHHHHHHHHHh
Confidence 2333221111 112445677776653321 2345678999999999998888888888877654
No 63
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.68 E-value=1.5e-16 Score=128.85 Aligned_cols=110 Identities=14% Similarity=0.006 Sum_probs=74.6
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeC----------CCCCeEecccccCCCCCHHHHHHHHHHHHhceeeeec
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSP----------NRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLN 89 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~----------~~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~ 89 (228)
.+|+++++... ..++||+++. ..+.|.||||+++ |||+.+||+||++||||+.+...
T Consensus 46 ~av~v~~~~~~------------~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~ 112 (191)
T 3o6z_A 46 NGATILLYNTK------------KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEV 112 (191)
T ss_dssp CEEEEEEEETT------------TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCE
T ss_pred CEEEEEEEECC------------CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcE
Confidence 36777777643 2389999764 3456999999999 99999999999999999997654
Q ss_pred cccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCcccc----CCCCCcceeeEEEehhhHhhhcCc
Q 027123 90 EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELE----IWPEQENRYRKWLNIQDAFQLCRY 151 (228)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~ 151 (228)
. .++.+... ... ....+++|.+....... ...+.|..++.|++++++.+++..
T Consensus 113 ~-~l~~~~~~-~~~-------~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 169 (191)
T 3o6z_A 113 R-KLFELYMS-PGG-------VTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKT 169 (191)
T ss_dssp E-EEEEEESC-TTT-------BCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHH
T ss_pred E-EEEEEEeC-CCc-------cCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 2 35543211 111 12346777777543211 112678899999999999998653
No 64
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.68 E-value=1.9e-16 Score=131.26 Aligned_cols=125 Identities=18% Similarity=0.129 Sum_probs=77.3
Q ss_pred cCcccccCCCCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---------------------------------
Q 027123 7 TGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN--------------------------------- 53 (228)
Q Consensus 7 ~gr~~~~~~~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~--------------------------------- 53 (228)
.|+.+.+..-...-+|++|+|...+ .++||+++.+
T Consensus 24 ~G~~~~~e~v~~~~aV~vl~~~~~~------------~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (218)
T 3q91_A 24 NGAQKSWDFMKTHDSVTVLLFNSSR------------RSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPG 91 (218)
T ss_dssp -----------CCCEEEEEEEEGGG------------TEEEEEEEECHHHHHHHTC------------------------
T ss_pred CCCEEEEEEEEcCCeEEEEEEECCC------------CEEEEEEcccccccccccccccccccccccccccccccccccc
Confidence 3555544433445688888988532 2899987532
Q ss_pred --CCCeEecccccCC-CCCHHHHHHHHHHHHhceee--eeccccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccc--
Q 027123 54 --RSDLVFPKGGWEN-DETVMEAACREALEEAGVRG--KLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEEL-- 126 (228)
Q Consensus 54 --~~~W~lPgG~ie~-gEt~~eAA~REl~EETGl~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-- 126 (228)
.+.|+||||++++ |||+++||+||++||||+.+ ... ..++.+...... ....+++|.+.+....
T Consensus 92 ~~~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l-~~l~~~~~~~g~--------~~~~~~~f~a~~~~~~~~ 162 (218)
T 3q91_A 92 SAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDL-RRVATYWSGVGL--------TGSRQTMFYTEVTDAQRS 162 (218)
T ss_dssp -CCEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGC-EEEEEEEEC-----------CCEEEEEEEEEECGGGBC
T ss_pred CCCeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCce-EEEEEEecCCCc--------cceEEEEEEEEECCcccc
Confidence 3459999999999 99999999999999999997 333 234443221111 1245677777765321
Q ss_pred ----cCCCCCcceeeEEEehhhHhhhcCch
Q 027123 127 ----EIWPEQENRYRKWLNIQDAFQLCRYE 152 (228)
Q Consensus 127 ----~~~~~~e~~~~~W~~~~el~~~~~~~ 152 (228)
....+.|..++.|++++++.+++...
T Consensus 163 ~~~~~~~d~~E~~ev~wv~l~el~~~i~~g 192 (218)
T 3q91_A 163 GPGGGLVEEGELIEVVHLPLEGAQAFADDP 192 (218)
T ss_dssp C---------CCEEEEEEEGGGHHHHHHCT
T ss_pred cCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 12235689999999999999987543
No 65
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.68 E-value=2.2e-16 Score=134.80 Aligned_cols=110 Identities=21% Similarity=0.220 Sum_probs=72.3
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeCC-CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEE
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEF 98 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~ 98 (228)
.++|+|+++..+ .+|||+++.. .+.|.+|||++++|||+.+||+||++||||+.+.... .+..|..
T Consensus 102 ~~v~avv~~~~~------------~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~-~~~~~~~ 168 (271)
T 2a6t_A 102 PVRGAIMLDMSM------------QQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRI-NPNEFID 168 (271)
T ss_dssp CEEEEEEBCSSS------------SEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTC-CTTCEEE
T ss_pred CeEEEEEEECCC------------CEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeee-eeeeecc
Confidence 467888887532 3899999864 5779999999999999999999999999999976542 2322221
Q ss_pred eeCCcccCCCCCCcEEEEEEEEEeCccc---cCCCCCcceeeEEEehhhHhhhcCc
Q 027123 99 RSKSKQDLHSLEGGCRGYMFSLEVTEEL---EIWPEQENRYRKWLNIQDAFQLCRY 151 (228)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~~~~ 151 (228)
.... ...+.+|.+...... ....+.|+.+++|++++++.++...
T Consensus 169 ~~~~---------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 169 MTIR---------GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp EEET---------TEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred CCcC---------CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 1100 123455555433211 1124568899999999999887543
No 66
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.67 E-value=2.4e-16 Score=129.48 Aligned_cols=112 Identities=23% Similarity=0.234 Sum_probs=75.1
Q ss_pred EEEEEEEEEeccCCCcccccccCCcceEEEEEeCC---------CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeec
Q 027123 19 RLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN---------RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLN 89 (228)
Q Consensus 19 r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~---------~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~ 89 (228)
..+|+++++...+ .+|||+++.. .+.|.||||++++|||+++||+||++||||+.+...
T Consensus 57 ~~av~vl~~~~~~------------~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~ 124 (209)
T 1g0s_A 57 GHAAVLLPFDPVR------------DEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRT 124 (209)
T ss_dssp CCEEEEEEEETTT------------TEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCE
T ss_pred CCEEEEEEEECCC------------CEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcE
Confidence 3477788887322 2899986532 234999999999999999999999999999997654
Q ss_pred cccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCcc-c-c---CCCCCcceeeEEEehhhHhhhcCc
Q 027123 90 EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEE-L-E---IWPEQENRYRKWLNIQDAFQLCRY 151 (228)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~-~---~~~~~e~~~~~W~~~~el~~~~~~ 151 (228)
. .++.+ +..... ....+++|.+.+... . . ...+.|..++.|++++++.+++..
T Consensus 125 ~-~l~~~-~~~~g~-------~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 125 K-PVLSF-LASPGG-------TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp E-EEEEE-ESCTTT-------BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred E-EeEEE-ecCCCc-------cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 2 45554 221111 113456777765321 1 1 124567789999999999998654
No 67
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.65 E-value=7.1e-16 Score=126.77 Aligned_cols=113 Identities=19% Similarity=0.108 Sum_probs=73.6
Q ss_pred EEEEEEEEeccCCCcccccccCCcceEEEEEeCC----CCCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceE
Q 027123 20 LVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN----RSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGI 95 (228)
Q Consensus 20 ~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~----~~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~ 95 (228)
-+|+++++..+++ +..+|||+++.. .+.|.||||++++||++++||+||++||||+.+.... .++.
T Consensus 62 ~av~v~~v~~~~~---------~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~-~l~~ 131 (212)
T 2dsc_A 62 DGVAVIPVLQRTL---------HYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAE-CSPA 131 (212)
T ss_dssp SEEEEEEEEECTT---------SCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEE-ECCC
T ss_pred CEEEEEEEEeCCC---------CCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceE-Eecc
Confidence 3666665554321 245899987522 2359999999999999999999999999999976553 3443
Q ss_pred EEEeeCCcccCCCCCCcEEEEEEEEEeC--cc-----ccCCCCCcceeeEEEehhhHhhhcC
Q 027123 96 WEFRSKSKQDLHSLEGGCRGYMFSLEVT--EE-----LEIWPEQENRYRKWLNIQDAFQLCR 150 (228)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~-----~~~~~~~e~~~~~W~~~~el~~~~~ 150 (228)
+ +...... ...+++|.+.+. .. .....+.|..++.|++++++.+++.
T Consensus 132 ~-~~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 132 V-CMDPGLS-------NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp E-ESCTTTB-------CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred E-EcCCCcc-------CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 3 1111110 123445555432 11 1122356889999999999998765
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.60 E-value=8.4e-15 Score=130.15 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=84.7
Q ss_pred eEEEEEeCCC----CCeEecccccCCCCCHHHHHHHHHHHHhceeeeeccccceEEEEeeCCcccCCCCCCcEEEEEEEE
Q 027123 45 EVLMVSSPNR----SDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSL 120 (228)
Q Consensus 45 ~vLLv~~~~~----~~W~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 120 (228)
+|||++|+.. |.|+||||+++.| |+++|+.||++||||+.+.... .++.+.+..... ...+++|.+
T Consensus 253 ~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~-~l~~~~h~~~h~--------~~~~~~~~~ 322 (369)
T 3fsp_A 253 RVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTE-PIVSFEHAFSHL--------VWQLTVFPG 322 (369)
T ss_dssp EEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECC-CCCEEEEECSSE--------EEEEEEEEE
T ss_pred EEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeec-ccccEEEEcceE--------EEEEEEEEE
Confidence 8999999764 6799999999999 9999999999999999988764 577665544322 244567777
Q ss_pred EeCccccCCCCCcceeeEEEehhhHhhhcCchHHHHHHHHHHHHHh
Q 027123 121 EVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMS 166 (228)
Q Consensus 121 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~l~~l~ 166 (228)
..... ..+..+++|++++++.++...+.++.+++.+.+.+.
T Consensus 323 ~~~~~-----~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~~ 363 (369)
T 3fsp_A 323 RLVHG-----GPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWAS 363 (369)
T ss_dssp EECCS-----SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHTC
T ss_pred EEcCC-----CCCccccEEeeHHHhhhCCCCHHHHHHHHHHHHHhc
Confidence 65542 356778999999999999888888888888776653
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.57 E-value=7.4e-15 Score=120.86 Aligned_cols=121 Identities=15% Similarity=0.021 Sum_probs=80.9
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCC-CHHHHHHHHHHHHhceeeeecc----
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDE-TVMEAACREALEEAGVRGKLNE---- 90 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gE-t~~eAA~REl~EETGl~~~~~~---- 90 (228)
++.+.++.++++.... .-.....+++.+|||.++ ..+.|.||||+++.|| |+++||+||++||||+.+....
T Consensus 30 ~~~~~~~~~~l~~~~~--~vv~~i~~~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~ 106 (212)
T 1u20_A 30 EGYKHACHALLHAPSQ--AKLFDRVPIRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTED 106 (212)
T ss_dssp SSCEEEEEEEEEEECC--CEETTTEECCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGG
T ss_pred CCCcccceEEEeCCCc--eEEEEEEecCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeee
Confidence 4567777777776432 111222345568888877 4578999999999999 9999999999999999876432
Q ss_pred ccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCcccc----------CCCCCcceeeEEEehhhHhhh
Q 027123 91 KPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELE----------IWPEQENRYRKWLNIQDAFQL 148 (228)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~----------~~~~~e~~~~~W~~~~el~~~ 148 (228)
..++.+.+... ....+++|.+....... ...+.|..++.|++++++.+.
T Consensus 107 ~~~~~~~~~~~---------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 107 DYRSSQVREHP---------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp GEEEEEEECTT---------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred eEEEeccccCC---------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 12333332211 12456778777653211 113457788999999999764
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.55 E-value=7.7e-14 Score=116.69 Aligned_cols=135 Identities=11% Similarity=0.068 Sum_probs=91.2
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCeEec-ccccCCC------CC---HHHHHHHHHHHHh
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDLVFP-KGGWEND------ET---VMEAACREALEEA 82 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W~lP-gG~ie~g------Et---~~eAA~REl~EET 82 (228)
...++++++++..+ ++||.+|.. .|.|.+| ||+++.| |+ +.+||+||++|||
T Consensus 58 ~h~av~v~v~~~~g-------------~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EEl 124 (235)
T 2dho_A 58 LHRAFSVFLFNTEN-------------KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAEL 124 (235)
T ss_dssp CEEEEEEEEECTTC-------------CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEcCCC-------------EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHH
Confidence 55677777876432 789888753 2579999 5999999 88 5999999999999
Q ss_pred ceeeeec----cccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhh---------c
Q 027123 83 GVRGKLN----EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQL---------C 149 (228)
Q Consensus 83 Gl~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~---------~ 149 (228)
|+.+... -.+++.+.|........ ......++|.+...... .....|+.+++|++++++.++ .
T Consensus 125 Gi~~~~v~~~~l~~l~~~~y~~~~~~~~---~~~e~~~vf~~~~~~~~-~~~~~Ev~~~~wv~~~el~~~l~~~~~~~~~ 200 (235)
T 2dho_A 125 GIPLEEVPPEEINYLTRIHYKAQSDGIW---GEHEIDYILLVRMNVTL-NPDPNEIKSYCYVSKEELKELLKKAASGEIK 200 (235)
T ss_dssp CCCGGGSCGGGSEEEEEEEEEEECSSSB---EEEEEEEEEEEECCCCC-CCCTTTEEEEEEECHHHHHHHHHHHHTTSSC
T ss_pred CCCccccChhhcEEEEEEEEeccCCCcc---ceeEEEEEEEEEECCCC-cCChHHEEEEEEEcHHHHHHHHhhccCCCcE
Confidence 9986421 13466665544322110 00123456766654322 224578999999999999875 3
Q ss_pred CchHHHHHHHHHHHHHhhcc
Q 027123 150 RYEWMREALEKFMKVMSEEQ 169 (228)
Q Consensus 150 ~~~~~~~~l~~~l~~l~~~~ 169 (228)
+.|+.+.++..++...-...
T Consensus 201 ftp~~~~i~~~~L~~ww~~~ 220 (235)
T 2dho_A 201 ITPWFKIIAATFLFKWWDNL 220 (235)
T ss_dssp BCHHHHHHHHHTHHHHHTTT
T ss_pred ECHhHHHHHHHHHHHHHhhc
Confidence 55778888888887665444
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.53 E-value=1.1e-13 Score=116.42 Aligned_cols=135 Identities=14% Similarity=0.149 Sum_probs=91.2
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCeEecc-cccCCC------CCH---HHHHHHHHHHHh
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDLVFPK-GGWEND------ETV---MEAACREALEEA 82 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W~lPg-G~ie~g------Et~---~eAA~REl~EET 82 (228)
...++++++++..+ +|||.+|.. .|.|.+|+ |+++.| |++ .+||+||++|||
T Consensus 69 ~h~av~v~v~~~~g-------------~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EEl 135 (246)
T 2pny_A 69 LHRAFSVVLFNTKN-------------RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAEL 135 (246)
T ss_dssp CEEEEEEEEECTTC-------------CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEeCCC-------------EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHH
Confidence 55677777876432 789888753 25799995 999999 887 999999999999
Q ss_pred ceeeeec----cccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhh---------c
Q 027123 83 GVRGKLN----EKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQL---------C 149 (228)
Q Consensus 83 Gl~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~---------~ 149 (228)
|+.+... -.+++.+.|........ ......++|.+...... .....|+.+++|++++++.++ .
T Consensus 136 Gi~~~~v~~~~l~~l~~~~y~~~~~~~~---~~~e~~~vf~~~~~~~~-~~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ 211 (246)
T 2pny_A 136 GIPGEQISPEDIVFMTIYHHKAKSDRIW---GEHEICYLLLVRKNVTL-NPDPSETKSILYLSQEELWELLEREARGEVK 211 (246)
T ss_dssp CCCTTTCCGGGSEEEEEEEEEEESSSSB---EEEEEEEEEEEECCCCC-CCCTTTEEEEEEECHHHHHHHHHHHHHTSSC
T ss_pred CCCccccCccccEEEEEEEEEecCCCce---eeeEEEEEEEEEECCCC-CCChHHeeEEEEEeHHHHHHHHHhccCCCce
Confidence 9985411 13456655543322110 00123456666654322 224578999999999999875 4
Q ss_pred CchHHHHHHHHHHHHHhhcc
Q 027123 150 RYEWMREALEKFMKVMSEEQ 169 (228)
Q Consensus 150 ~~~~~~~~l~~~l~~l~~~~ 169 (228)
+.|+.+.++..++...-...
T Consensus 212 ftp~~~~i~~~~l~~ww~~~ 231 (246)
T 2pny_A 212 VTPWLRTIAERFLYRWWPHL 231 (246)
T ss_dssp BCHHHHHHHHHTHHHHGGGT
T ss_pred ECHhHHHHHHHHHHHHHHhh
Confidence 55678888888887765544
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=2.9e-13 Score=112.95 Aligned_cols=117 Identities=19% Similarity=0.131 Sum_probs=80.0
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCc-ceEEEEEeCCC-----CCeEecccccCCCCC--------------------H
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTR-IEVLMVSSPNR-----SDLVFPKGGWENDET--------------------V 70 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~-~~vLLv~~~~~-----~~W~lPgG~ie~gEt--------------------~ 70 (228)
..|.++++|+++... ++ .+|||++|... |.|.||||+|+.+|+ +
T Consensus 6 ~~r~aA~lill~~~~----------~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~ 75 (232)
T 3qsj_A 6 DIRKAATLVVIRDGA----------NKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPAL 75 (232)
T ss_dssp CEEEEEEEEEEEECG----------GGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHH
T ss_pred CCcceEEEEEEEcCC----------CCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHH
Confidence 468888889888653 23 79999999753 679999999999997 5
Q ss_pred HHHHHHHHHHHhceeeeeccc--------------------------------------cceEEEEeeCCcccCCCCCCc
Q 027123 71 MEAACREALEEAGVRGKLNEK--------------------------------------PLGIWEFRSKSKQDLHSLEGG 112 (228)
Q Consensus 71 ~eAA~REl~EETGl~~~~~~~--------------------------------------~l~~~~~~~~~~~~~~~~~~~ 112 (228)
..||+||++||||+.+..... .+.-|..-. . +.....+
T Consensus 76 ~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWi--T--P~~~~rR 151 (232)
T 3qsj_A 76 AVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFV--T--PPTQPVR 151 (232)
T ss_dssp HHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEE--C--CTTSSSE
T ss_pred HHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEc--C--CcCCcee
Confidence 899999999999997432110 011111000 0 0112345
Q ss_pred EEEEEEEEEeCcccc-CCCCCcceeeEEEehhhHhh
Q 027123 113 CRGYMFSLEVTEELE-IWPEQENRYRKWLNIQDAFQ 147 (228)
Q Consensus 113 ~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~ 147 (228)
..+.||.+....... .....|+.+++|++++++.+
T Consensus 152 fdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~ 187 (232)
T 3qsj_A 152 FDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLT 187 (232)
T ss_dssp EEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHH
T ss_pred EEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHH
Confidence 667888887763221 33567999999999999964
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.45 E-value=1e-12 Score=113.46 Aligned_cols=133 Identities=14% Similarity=0.090 Sum_probs=90.3
Q ss_pred CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCC-----CCCe-EecccccCCCCCHHHHHHHHHHHHhceeeeecc
Q 027123 17 NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPN-----RSDL-VFPKGGWENDETVMEAACREALEEAGVRGKLNE 90 (228)
Q Consensus 17 ~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~-----~~~W-~lPgG~ie~gEt~~eAA~REl~EETGl~~~~~~ 90 (228)
-...+|-+.+|...+ ++.++||.+|.. -|.| .+|+|+++.|||+.+||+||+.||+|+......
T Consensus 116 ~~~~~vh~~~~~~~~----------~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~ 185 (300)
T 3dup_A 116 VRAYGVHLNGYVGAG----------ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALAR 185 (300)
T ss_dssp CCEEEEEEEEEESCG----------GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHT
T ss_pred eEEEEEEEEEEEecC----------CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhh
Confidence 345567777777653 456888888754 2569 599999999999999999999999999865322
Q ss_pred --ccceEEEEeeCCcccCCCCCCcEEEEEEEEEeCcccc-CCCCCcceeeEEEehhhHhhhcCc-----hHHHHHHHHHH
Q 027123 91 --KPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELE-IWPEQENRYRKWLNIQDAFQLCRY-----EWMREALEKFM 162 (228)
Q Consensus 91 --~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~-----~~~~~~l~~~l 162 (228)
.+.+.+.|....... ......++|.+.+..... ...+.|+.+++|++++|+.+++.. ++..-++-+++
T Consensus 186 ~l~~~g~i~y~~~~~~G----~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~pg~F~p~~~lV~ldfl 261 (300)
T 3dup_A 186 QAIPVGAITYCMESPAG----IKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRTTEAFKFNVNLTVIDFA 261 (300)
T ss_dssp TCEEEEEEEEEEEETTE----EEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHHCCCBCTTHHHHHHHHH
T ss_pred hccccceEEEEEecCCC----eEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhcCCCcCccHHHHHHHHH
Confidence 235555554332211 112345677777665433 234679999999999999887654 45555554444
Q ss_pred H
Q 027123 163 K 163 (228)
Q Consensus 163 ~ 163 (228)
.
T Consensus 262 ~ 262 (300)
T 3dup_A 262 I 262 (300)
T ss_dssp H
T ss_pred H
Confidence 3
No 74
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.41 E-value=6.1e-13 Score=116.00 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=84.8
Q ss_pred cEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHHh-ceeeeeccccceEE
Q 027123 18 FRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEA-GVRGKLNEKPLGIW 96 (228)
Q Consensus 18 ~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EET-Gl~~~~~~~~l~~~ 96 (228)
.+..||||+.+.+ ||||+ ++.| |.||||.++ |+..++|+||++||| |+++... ..+++|
T Consensus 182 p~~~vgaii~~~g--------------~vLL~--~~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~-~L~~v~ 241 (321)
T 3rh7_A 182 GEIRLGAVLEQQG--------------AVFLA--GNET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIG-FLYSVY 241 (321)
T ss_dssp SCEEEEEEEESSS--------------CEEEB--CSSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEE-EEEEEE
T ss_pred CcceEEEEEEECC--------------EEEEe--eCCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeec-eEEEEE
Confidence 5678899988754 69999 6667 999988654 444569999999997 9999877 357777
Q ss_pred EEeeCCcccCCCCCCcEEEEEEEEEeCccccCCCCCcceeeEEEehhhHhhh-cCchHHHHHHHHHHHHHhhcc
Q 027123 97 EFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQL-CRYEWMREALEKFMKVMSEEQ 169 (228)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~-~~~~~~~~~l~~~l~~l~~~~ 169 (228)
+.... ..+..+|.+...+.. ..+++||++++++.. +.++.++.+|+.+++..+.+.
T Consensus 242 ~~~~~----------~~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~ 298 (321)
T 3rh7_A 242 EDKSD----------GRQNIVYHALASDGA-------PRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGN 298 (321)
T ss_dssp ECTTT----------CCEEEEEEEEECSSC-------CSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSS
T ss_pred EcCCC----------ceEEEEEEEEeCCCC-------eeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCC
Confidence 54321 123457777765432 277999999999986 457899999998887665543
No 75
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.38 E-value=9.1e-13 Score=108.90 Aligned_cols=95 Identities=16% Similarity=0.028 Sum_probs=63.8
Q ss_pred eEEEEEeCCCCCeEecccccCCCC-CHHHHHHHHHHHHhceeeeecc-ccceEEEEeeCCcccCCCCCCcEEEEEEEEEe
Q 027123 45 EVLMVSSPNRSDLVFPKGGWENDE-TVMEAACREALEEAGVRGKLNE-KPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEV 122 (228)
Q Consensus 45 ~vLLv~~~~~~~W~lPgG~ie~gE-t~~eAA~REl~EETGl~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 122 (228)
++||+.+. .+.|.||||+++.|| |+++||+||++||||+.+.... ..+..+....... .....++|.+.+
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~-------~~~~~~~f~~~l 137 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSG-------PRVVAHFYAKRL 137 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSS-------SSEEEEEEEEEC
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCC-------CeEEEEEEEEEe
Confidence 45665555 578999999999999 9999999999999999876311 1233332211111 124556777776
Q ss_pred Ccccc----------CCCCCcceeeEEEehhhHhh
Q 027123 123 TEELE----------IWPEQENRYRKWLNIQDAFQ 147 (228)
Q Consensus 123 ~~~~~----------~~~~~e~~~~~W~~~~el~~ 147 (228)
..... ...+.|..++.|++++++.+
T Consensus 138 ~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 138 TLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp CHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred ccccceecccccccccccCCceeeEEEEEHHHhhh
Confidence 54221 22245788999999999873
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.25 E-value=1.5e-11 Score=99.73 Aligned_cols=129 Identities=17% Similarity=0.152 Sum_probs=80.2
Q ss_pred cccccCcccccCCC-CcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCCCHHHHHHHHHHHH
Q 027123 3 VEARTGRLRQRYDN-NFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEE 81 (228)
Q Consensus 3 ~~~~~gr~~~~~~~-~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gEt~~eAA~REl~EE 81 (228)
+.+|.-|-+..|.. ++|..|.+|++.... +.-+|||+++. .+.|.||||.+++||+.++|+.||+.||
T Consensus 41 ~~~r~~rl~~~y~~~g~R~sV~avil~~~~----------~~phVLLlq~~-~~~f~LPGGkle~gE~~~eaL~REL~EE 109 (208)
T 3bho_A 41 VAARFQRMREEFDKIGMRRTVEGVLIVHEH----------RLPHVLLLQLG-TTFFKLPGGELNPGEDEVEGLKRLMTEI 109 (208)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEEEEEEEET----------TEEEEEEEEEE-TTEEECSEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCceEEEEEEEEcCC----------CCcEEEEEEcC-CCcEECCCcccCCCCCHHHHHHHHHHHH
Confidence 34555555556663 788888777765443 34589999984 4689999999999999999999999999
Q ss_pred hce------eeeeccccceEEEEeeCCcc--cCCC---CCCcEEEEEEEEEeCcccc-CCCCCcceeeEEEehhhH
Q 027123 82 AGV------RGKLNEKPLGIWEFRSKSKQ--DLHS---LEGGCRGYMFSLEVTEELE-IWPEQENRYRKWLNIQDA 145 (228)
Q Consensus 82 TGl------~~~~~~~~l~~~~~~~~~~~--~~~~---~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el 145 (228)
.|+ ...+. ..+|.|-.+..... ...+ ....-+.-+|.+....... ..|. ..+..=+++=|+
T Consensus 110 Lg~~~~~~~~~eIg-e~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vPk--n~kL~AvPLfel 182 (208)
T 3bho_A 110 LGRQDGVLQDWVID-DCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPK--NYKLVAAPLFEL 182 (208)
T ss_dssp HCCCC-----CEEE-EEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEET--TCEEEEEEHHHH
T ss_pred hCCCcCCCccEEEh-heEEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEecCC--CCeEEeecHHhh
Confidence 994 44444 35676633322111 1111 1123456788887766432 2222 233444455554
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.02 E-value=2.6e-10 Score=91.62 Aligned_cols=96 Identities=10% Similarity=-0.013 Sum_probs=59.7
Q ss_pred CCcEEEEEEEEEeccCCCcccccccCCcceEEEEEeCCCCCeEecccccCCCC-CHHHHHHHHHHHHhce-eeeeccccc
Q 027123 16 NNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDE-TVMEAACREALEEAGV-RGKLNEKPL 93 (228)
Q Consensus 16 ~~~r~~vg~ii~~~~~~~~~~~~~~~~~~~vLLv~~~~~~~W~lPgG~ie~gE-t~~eAA~REl~EETGl-~~~~~~~~l 93 (228)
.+.|.++-|.+|..+.. -.-+...- ...+|++.+..|.|.||||+||+|| |+++|+.||+.||+|+ .+... ..+
T Consensus 18 ~~~~hach~mlya~~~~--~lfg~~p~-r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~-~y~ 93 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPG--QLFGRIPM-RFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEA-DYL 93 (214)
T ss_dssp TTCEEEEEEEEEEEEEE--EETTTEEE-EEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGG-GEE
T ss_pred cCccEeeEEEEEcCCcc--ccccccch-hheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeee-eeE
Confidence 57888888888876420 00000001 1335667777799999999999999 9999999999999997 34433 223
Q ss_pred eEEEEeeCCcccCCCCCCcEEEEEEEEEeCc
Q 027123 94 GIWEFRSKSKQDLHSLEGGCRGYMFSLEVTE 124 (228)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 124 (228)
.+..+... .....++|.+....
T Consensus 94 ~s~~~~yp---------~~V~LHfY~crl~~ 115 (214)
T 3kvh_A 94 SSHLTEGP---------HRVVAHLYARQLTL 115 (214)
T ss_dssp EEEEC-------------CEEEEEEEEECCH
T ss_pred EEEeccCC---------CEEEEEEEEEEeeC
Confidence 33222211 12566788887764
No 78
>2x5c_A Hypothetical protein ORF131; viral protein; HET: GOL; 1.80A {Pyrobaculum spherical virus}
Probab=37.94 E-value=50 Score=22.86 Aligned_cols=23 Identities=17% Similarity=0.329 Sum_probs=18.7
Q ss_pred CcceEEEEEeCCCCCeEeccccc
Q 027123 42 TRIEVLMVSSPNRSDLVFPKGGW 64 (228)
Q Consensus 42 ~~~~vLLv~~~~~~~W~lPgG~i 64 (228)
+..++|++++++.+.-..|.--|
T Consensus 71 ngykylvirhpdggthtvpktdi 93 (131)
T 2x5c_A 71 NGYKYLVIRHPDGGTHTVPKTDI 93 (131)
T ss_dssp TSCEEEEEECTTSCEEECCTTCC
T ss_pred CCcEEEEEECCCCCccccccccH
Confidence 57899999999988788887544
Done!