Citrus Sinensis ID: 027124


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPSA
ccEEHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc
ccEHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHEEEEHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
MTVFHFFNcailtfgphavyysatplseydtlgTSVKAALVYLGTALVKLVCLATFlkvsetdnfdPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMwlrknkpktlIPIIYACAGIVATMPSITSYLRrglgwqfpkvvGFELFTSLVMAFISWQLfsacqrpsa
MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLfsacqrpsa
MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPSA
**VFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSAC*****
MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRP**
MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPSA
*TVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRP**
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiii
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
ooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiii
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MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIVATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query228 2.2.26 [Sep-21-2011]
Q28FY5225 Transmembrane protein 147 yes no 0.706 0.715 0.372 7e-24
Q6DFI2225 Transmembrane protein 147 N/A no 0.706 0.715 0.372 8e-24
Q6DGL7225 Transmembrane protein 147 yes no 0.732 0.742 0.357 6e-23
Q9BVK8224 Transmembrane protein 147 yes no 0.657 0.669 0.374 2e-22
Q2TA63224 Transmembrane protein 147 yes no 0.657 0.669 0.374 2e-22
Q3SZR6224 Transmembrane protein 147 yes no 0.657 0.669 0.374 3e-22
Q9CQG6224 Transmembrane protein 147 yes no 0.657 0.669 0.374 3e-22
>sp|Q28FY5|TM147_XENTR Transmembrane protein 147 OS=Xenopus tropicalis GN=tmem147 PE=2 SV=1 Back     alignment and function desciption
 Score =  110 bits (275), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 94/169 (55%), Gaps = 8/169 (4%)

Query: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60
           MT+FHF NC  L + P+ + Y  + LSEY+     V+A   YL   L K++ LATF    
Sbjct: 1   MTLFHFGNCFALAYFPYFITYKCSGLSEYNAFWRCVQAGATYLCVQLCKMLFLATFFPTW 60

Query: 61  E--TDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQ-NHKFQAVGLGWAFADSVLH 117
           E     +D   E +KA +   D+ GL+  ++    RN  +  +K     +GWA A+ V+ 
Sbjct: 61  EGAVGAYDFIGEFMKATVDLADLLGLHLVMS----RNAGKGEYKIMVAAMGWATAELVMS 116

Query: 118 RLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKP 166
           R  PLWVGARG+EF W Y+   +++N +LV  +++AAL   MW R + P
Sbjct: 117 RCLPLWVGARGIEFDWKYIQMSIDSNISLVHYMAVAAL-VWMWTRYDLP 164





Xenopus tropicalis (taxid: 8364)
>sp|Q6DFI2|TM147_XENLA Transmembrane protein 147 OS=Xenopus laevis GN=tmem147 PE=2 SV=1 Back     alignment and function description
>sp|Q6DGL7|TM147_DANRE Transmembrane protein 147 OS=Danio rerio GN=tmem147 PE=2 SV=1 Back     alignment and function description
>sp|Q9BVK8|TM147_HUMAN Transmembrane protein 147 OS=Homo sapiens GN=TMEM147 PE=1 SV=1 Back     alignment and function description
>sp|Q2TA63|TM147_RAT Transmembrane protein 147 OS=Rattus norvegicus GN=Tmem147 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZR6|TM147_BOVIN Transmembrane protein 147 OS=Bos taurus GN=TMEM147 PE=2 SV=1 Back     alignment and function description
>sp|Q9CQG6|TM147_MOUSE Transmembrane protein 147 OS=Mus musculus GN=Tmem147 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query228
224067292228 predicted protein [Populus trichocarpa] 1.0 1.0 0.964 1e-126
255538460228 protein with unknown function [Ricinus c 1.0 1.0 0.964 1e-126
224136646228 predicted protein [Populus trichocarpa] 1.0 1.0 0.960 1e-125
118482807228 unknown [Populus trichocarpa] 1.0 1.0 0.956 1e-125
225458469228 PREDICTED: transmembrane protein 147 [Vi 0.995 0.995 0.951 1e-123
356510328228 PREDICTED: transmembrane protein 147-lik 0.995 0.995 0.947 1e-123
351721575228 uncharacterized protein LOC100500074 [Gl 0.995 0.995 0.947 1e-123
357465367228 Transmembrane protein [Medicago truncatu 1.0 1.0 0.938 1e-123
255639411228 unknown [Glycine max] 0.995 0.995 0.942 1e-123
388497716228 unknown [Lotus japonicus] 0.995 0.995 0.933 1e-123
>gi|224067292|ref|XP_002302451.1| predicted protein [Populus trichocarpa] gi|118482507|gb|ABK93176.1| unknown [Populus trichocarpa] gi|222844177|gb|EEE81724.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/228 (96%), Positives = 226/228 (99%)

Query: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60
           MT+FHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS
Sbjct: 1   MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60

Query: 61  ETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
           E D+FDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA
Sbjct: 61  ENDSFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120

Query: 121 PLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV 180
           PLWVG+RGLEFTWDY+LQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV
Sbjct: 121 PLWVGSRGLEFTWDYILQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV 180

Query: 181 ATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPSA 228
           ATMPSITSYLRRGLGW FPKVVGFELFTSL+MAFISWQLFSACQRPS+
Sbjct: 181 ATMPSITSYLRRGLGWHFPKVVGFELFTSLMMAFISWQLFSACQRPSS 228




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538460|ref|XP_002510295.1| protein with unknown function [Ricinus communis] gi|223550996|gb|EEF52482.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
>gi|224136646|ref|XP_002326911.1| predicted protein [Populus trichocarpa] gi|222835226|gb|EEE73661.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118482807|gb|ABK93320.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225458469|ref|XP_002284036.1| PREDICTED: transmembrane protein 147 [Vitis vinifera] gi|302142390|emb|CBI19593.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356510328|ref|XP_003523891.1| PREDICTED: transmembrane protein 147-like [Glycine max] Back     alignment and taxonomy information
>gi|351721575|ref|NP_001236446.1| uncharacterized protein LOC100500074 [Glycine max] gi|255628973|gb|ACU14831.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357465367|ref|XP_003602965.1| Transmembrane protein [Medicago truncatula] gi|355492013|gb|AES73216.1| Transmembrane protein [Medicago truncatula] gi|388506726|gb|AFK41429.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255639411|gb|ACU20001.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388497716|gb|AFK36924.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query228
TAIR|locus:2015393228 AT1G47640 "AT1G47640" [Arabido 0.995 0.995 0.885 2.5e-106
WB|WBGene00022734225 ZK418.5 [Caenorhabditis elegan 0.929 0.942 0.346 1.3e-27
ZFIN|ZDB-GENE-040718-187225 tmem147 "transmembrane protein 0.732 0.742 0.357 9.7e-25
UNIPROTKB|Q3SZR6224 TMEM147 "Transmembrane protein 0.657 0.669 0.374 1.1e-23
UNIPROTKB|Q9BVK8224 TMEM147 "Transmembrane protein 0.657 0.669 0.374 1.1e-23
MGI|MGI:1915011224 Tmem147 "transmembrane protein 0.657 0.669 0.374 1.1e-23
RGD|1304706224 Tmem147 "transmembrane protein 0.657 0.669 0.374 1.1e-23
FB|FBgn0015338227 CG5861 [Drosophila melanogaste 0.723 0.726 0.385 2.9e-23
GENEDB_PFALCIPARUM|PF10_0070260 PF10_0070 "hypothetical protei 0.728 0.638 0.294 3.6e-18
UNIPROTKB|Q8IJX1260 PF10_0070 "Conserved Plasmodiu 0.728 0.638 0.294 3.6e-18
TAIR|locus:2015393 AT1G47640 "AT1G47640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
 Identities = 201/227 (88%), Positives = 213/227 (93%)

Query:     1 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVS 60
             MT+FHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAA+VYL TALVKLVCLATFL+VS
Sbjct:     1 MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAAVVYLATALVKLVCLATFLQVS 60

Query:    61 ETDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
             ET+ FDPYQE LKA+IGFIDVAGLY+AL QLTHRNISQNHKFQAVGLGWAFADSVLHRLA
Sbjct:    61 ETEVFDPYQEALKAMIGFIDVAGLYYALAQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120

Query:   121 PLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYACAGIV 180
             PLWVGARGLEFTWDY+LQGLEANANLV +ISLAALGSLMWLRKNKPK+LIPIIY CA I+
Sbjct:   121 PLWVGARGLEFTWDYVLQGLEANANLVFTISLAALGSLMWLRKNKPKSLIPIIYTCAVII 180

Query:   181 ATMPSITSYLRRGLGWQFPKVVGFELFTSLVMAFISWQLFSACQRPS 227
             ATMPSITSYL+R  GW FPK+VGFEL TSLVMAFIS QLF  CQRPS
Sbjct:   181 ATMPSITSYLKRVNGWHFPKIVGFELATSLVMAFISCQLFILCQRPS 227




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0005739 "mitochondrion" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
WB|WBGene00022734 ZK418.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-187 tmem147 "transmembrane protein 147" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZR6 TMEM147 "Transmembrane protein 147" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BVK8 TMEM147 "Transmembrane protein 147" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1915011 Tmem147 "transmembrane protein 147" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1304706 Tmem147 "transmembrane protein 147" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0015338 CG5861 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF10_0070 PF10_0070 "hypothetical protein" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IJX1 PF10_0070 "Conserved Plasmodium membrane protein" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query228
pfam09767159 pfam09767, DUF2053, Predicted membrane protein (DU 3e-71
>gnl|CDD|220389 pfam09767, DUF2053, Predicted membrane protein (DUF2053) Back     alignment and domain information
 Score =  214 bits (546), Expect = 3e-71
 Identities = 81/161 (50%), Positives = 106/161 (65%), Gaps = 2/161 (1%)

Query: 2   TVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSE 61
           T+FHF NC  L FGP+ + Y A+ LSEY      VKAA  Y+ T L+KL+ LATF  VS+
Sbjct: 1   TLFHFGNCLALAFGPYYIVYKASGLSEYGAFWKCVKAAGGYILTQLLKLLLLATFFPVSD 60

Query: 62  TDNFDPYQELLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAP 121
           + +FD + E+LK    FID+AGLY  L+Q          +  AVGLGWAFA+S++ RL P
Sbjct: 61  SGSFDIFGEILKISADFIDLAGLYLVLSQK-TNAGKGESRILAVGLGWAFAESIMSRLIP 119

Query: 122 LWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMWLR 162
           LWVGARGLEF W Y+L+ +EAN +LV ++ LA L   +W R
Sbjct: 120 LWVGARGLEFDWKYILRSIEANLDLVQTLVLACLL-WLWSR 159


This entry is of the conserved N-terminal 150 residues of proteins conserved from plants to humans. The function is unknown although some annotation suggests it to be a transmembrane protein. Length = 159

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 228
KOG3236225 consensus Predicted membrane protein [Function unk 100.0
PF09767159 DUF2053: Predicted membrane protein (DUF2053); Int 100.0
>KOG3236 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=3.7e-79  Score=527.73  Aligned_cols=221  Identities=46%  Similarity=0.699  Sum_probs=209.1

Q ss_pred             CcchhhHhHHHHhhhceeeeeeccCccccccchhHHHHHHHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHH
Q 027124            1 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAALVYLGTALVKLVCLATFLKVSETDNFDPYQELLKALIGFID   80 (228)
Q Consensus         1 MT~~HF~NC~aL~f~Py~i~Yk~s~LsEy~~~~~c~~a~~~Yl~TQl~Kml~LATf~P~~~~~~f~~~~e~lk~~v~~iD   80 (228)
                      ||+|||+||++|+|+||+++||+||+|||+++|||+|+++.|++||++||+++|||||+.|++.||+++|++|+++|++|
T Consensus         1 mtlFhf~Ncfal~~~py~~~yk~sglsey~~~wkcv~a~~~yl~tqL~klL~lAtff~~~~s~~f~~~~e~LK~s~di~d   80 (225)
T KOG3236|consen    1 MTLFHFGNCFALAFAPYFITYKYSGLSEYSAFWKCVQAGGGYLFTQLVKMLILATFFPALESGGFDFVPEFLKCSADIAD   80 (225)
T ss_pred             CceeeccceeecccCceEEEEeccCccccCcchHHHHHhHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHhhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccccCCCCCceeEeeehhhhhHHHHHhhhhhhhhccCCccchHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 027124           81 VAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYLLQGLEANANLVLSISLAALGSLMW  160 (228)
Q Consensus        81 l~Gly~vL~~~~~~~~~~~~ril~~GlGWa~ae~v~trl~plwvgaRg~eF~Wkyi~~slesNi~Lv~~is~a~L~~~mw  160 (228)
                      ++|+++++++.++   |+|+|++++|+||++||++++|+.||||||||+||||+|+|+|+|||.||+|+++++++ .||.
T Consensus        81 l~Gl~li~s~~~~---~~~~k~~~~gLGWafA~sVlhRlipLWVGARG~eFtW~yVl~~LesN~~Lv~~I~la~l-~w~i  156 (225)
T KOG3236|consen   81 LIGLHLIMSRFPG---KGEVKFVVAGLGWAFAESVLHRLIPLWVGARGTEFTWDYVLQSLESNANLVQIISLAAL-GWMI  156 (225)
T ss_pred             HhhHHHHHhcCCC---CCceeEEEeechHHHHHHHHHhhhHhhccccCceeEHHHHHHHhccCccHhhhhHHHHH-HHHh
Confidence            9999999999999   46999999999999999999999999999999999999999999999999999999999 8999


Q ss_pred             HhcCCCCcchhHHHHHHHHHhhhhhHHHHHHhhc---CCcchhhHHHHHHHHHHHHHHHHHHHH-hcCCCCC
Q 027124          161 LRKNKPKTLIPIIYACAGIVATMPSITSYLRRGL---GWQFPKVVGFELFTSLVMAFISWQLFS-ACQRPSA  228 (228)
Q Consensus       161 ~R~~~~~~~~p~v~~l~~~~~~~~~i~~~~~~~~---~w~~~~~l~~~~~~s~~~~~~tl~~y~-~~~~~~~  228 (228)
                      +|+|+++..+|.|..++..++++.++.|...|..   ||.   .+++|+++|++||++|+|+|+ .+|||+.
T Consensus       157 tr~d~~~~~~p~Vsli~~~aV~~a~~~~~~~hl~~l~gW~---~v~f~~a~s~vmaf~t~~ly~~l~qr~sl  225 (225)
T KOG3236|consen  157 TRTDLKFLFRPAVSLILACAVFKAFVPETTSHLKSLGGWH---FVAFRAAVSLVMAFITLQLYSALCQRPSL  225 (225)
T ss_pred             eeccccccccchhHHHHHHHHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999987777777777776666666666644   888   899999999999999999999 8999974



>PF09767 DUF2053: Predicted membrane protein (DUF2053); InterPro: IPR019164 This family of proteins is conserved from plants to humans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00