Query 027128
Match_columns 228
No_of_seqs 136 out of 1038
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 05:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK02141 Maf-like protein; Rev 100.0 2.6E-67 5.6E-72 452.0 26.3 190 30-227 7-197 (207)
2 PRK00078 Maf-like protein; Rev 100.0 4E-67 8.6E-72 446.4 25.6 187 32-227 1-188 (192)
3 PRK14368 Maf-like protein; Pro 100.0 3.6E-67 7.8E-72 446.9 25.3 188 29-227 2-189 (193)
4 PRK00884 Maf-like protein; Rev 100.0 9.2E-67 2E-71 444.7 25.9 185 32-227 2-187 (194)
5 PRK00148 Maf-like protein; Rev 100.0 1.3E-66 2.9E-71 443.8 25.8 185 32-227 1-185 (194)
6 TIGR00172 maf MAF protein. Thi 100.0 1.9E-66 4.1E-71 439.3 25.1 182 31-225 2-183 (183)
7 COG0424 Maf Nucleotide-binding 100.0 2.2E-66 4.8E-71 440.2 25.5 185 31-226 2-186 (193)
8 PRK00032 Maf-like protein; Rev 100.0 3.9E-66 8.6E-71 439.6 25.1 183 33-227 3-185 (190)
9 PRK14366 Maf-like protein; Pro 100.0 5.1E-66 1.1E-70 440.4 25.5 184 32-227 5-189 (195)
10 PRK04056 Maf-like protein; Rev 100.0 2.8E-66 6E-71 437.2 23.7 180 33-224 1-180 (180)
11 PRK00234 Maf-like protein; Rev 100.0 7.4E-66 1.6E-70 438.6 26.0 184 33-227 3-187 (192)
12 PRK14362 Maf-like protein; Pro 100.0 4.9E-66 1.1E-70 444.1 24.8 185 31-227 11-196 (207)
13 PRK04694 Maf-like protein; Rev 100.0 7.2E-66 1.6E-70 438.0 24.6 187 33-227 1-187 (190)
14 PRK14367 Maf-like protein; Pro 100.0 1.6E-65 3.5E-70 439.6 25.6 189 33-227 3-191 (202)
15 PRK01526 Maf-like protein; Rev 100.0 1.7E-65 3.7E-70 440.2 25.7 189 29-227 5-196 (205)
16 PRK04425 Maf-like protein; Rev 100.0 3.3E-65 7.1E-70 435.8 26.2 186 31-227 4-191 (196)
17 PRK14361 Maf-like protein; Pro 100.0 2.6E-65 5.6E-70 433.6 24.6 180 34-227 1-180 (187)
18 PRK00648 Maf-like protein; Rev 100.0 3.4E-65 7.4E-70 434.2 25.1 185 31-227 2-187 (191)
19 PRK14365 Maf-like protein; Pro 100.0 4.4E-65 9.5E-70 435.4 25.8 184 33-227 3-187 (197)
20 PRK14364 Maf-like protein; Pro 100.0 3E-65 6.5E-70 431.3 24.2 179 36-227 1-179 (181)
21 PRK01441 Maf-like protein; Rev 100.0 5.2E-65 1.1E-69 437.9 25.8 191 30-226 3-194 (207)
22 PRK14363 Maf-like protein; Pro 100.0 9.2E-65 2E-69 435.2 24.7 182 32-226 1-182 (204)
23 cd00555 Maf Nucleotide binding 100.0 1.3E-64 2.8E-69 427.0 24.0 180 34-224 1-180 (180)
24 PRK02478 Maf-like protein; Rev 100.0 2.1E-64 4.6E-69 431.8 25.5 184 32-227 3-194 (199)
25 PRK01839 Maf-like protein; Rev 100.0 2.1E-64 4.6E-69 434.6 25.4 190 31-227 9-205 (209)
26 PF02545 Maf: Maf-like protein 100.0 5.6E-65 1.2E-69 434.1 17.3 187 32-227 1-188 (195)
27 KOG1509 Predicted nucleic acid 100.0 9E-55 1.9E-59 366.5 20.5 193 30-227 8-205 (209)
28 cd00985 Maf_Ham1 Maf_Ham1. Maf 100.0 3.8E-30 8.3E-35 205.0 18.1 122 34-167 1-123 (131)
29 cd00515 HAM1 NTPase/HAM1. Thi 95.6 0.61 1.3E-05 39.5 13.7 100 34-151 1-119 (183)
30 PRK14824 putative deoxyribonuc 95.3 0.96 2.1E-05 39.1 14.4 99 33-151 2-131 (201)
31 PRK00120 dITP/XTP pyrophosphat 94.7 2 4.4E-05 36.8 14.6 110 32-159 1-133 (196)
32 PRK14822 nucleoside-triphospha 94.3 2 4.4E-05 37.0 13.7 103 33-150 3-127 (200)
33 PF01725 Ham1p_like: Ham1 fami 93.9 0.79 1.7E-05 38.9 10.3 113 34-165 1-137 (189)
34 PRK14821 putative deoxyribonuc 93.6 1.9 4.1E-05 36.6 12.1 100 32-150 1-115 (184)
35 TIGR00042 non-canonical purine 93.6 4.1 8.9E-05 34.6 14.6 102 33-150 1-117 (184)
36 PRK14823 putative deoxyribonuc 93.4 4.6 9.9E-05 34.5 14.5 101 32-150 1-123 (191)
37 PRK02491 putative deoxyribonuc 91.5 11 0.00024 35.1 15.0 121 9-150 109-254 (328)
38 COG0127 Xanthosine triphosphat 87.1 19 0.00041 31.1 14.9 106 32-150 2-124 (194)
39 PRK14826 putative deoxyribonuc 84.4 26 0.00056 30.7 12.1 108 30-150 7-143 (222)
40 PRK14825 putative deoxyribonuc 79.5 39 0.00085 29.0 14.5 102 33-151 3-128 (199)
41 PF12031 DUF3518: Domain of un 56.2 17 0.00036 32.7 4.1 43 6-48 131-174 (257)
42 cd01211 GAPCenA GAPCenA Phosph 47.1 83 0.0018 25.4 6.3 51 117-167 12-74 (125)
43 COG3910 Predicted ATPase [Gene 44.1 19 0.0004 31.7 2.4 56 6-66 152-211 (233)
44 COG4090 Uncharacterized protei 43.2 49 0.0011 27.2 4.5 41 107-150 85-126 (154)
45 COG0181 HemC Porphobilinogen d 41.9 19 0.00041 33.2 2.3 48 34-82 121-173 (307)
46 COG0041 PurE Phosphoribosylcar 41.9 32 0.0007 28.8 3.4 28 31-58 4-36 (162)
47 TIGR00083 ribF riboflavin kina 41.8 42 0.0009 30.5 4.4 38 40-79 56-93 (288)
48 PF05125 Phage_cap_P2: Phage m 41.3 72 0.0016 29.8 6.0 98 103-206 224-332 (333)
49 COG2425 Uncharacterized protei 39.4 98 0.0021 30.0 6.7 62 70-142 288-349 (437)
50 COG0031 CysK Cysteine synthase 39.0 1.4E+02 0.0029 27.6 7.3 137 37-219 94-246 (300)
51 PF01379 Porphobil_deam: Porph 36.8 30 0.00066 30.3 2.6 26 33-58 120-145 (215)
52 cd02064 FAD_synthetase_N FAD s 35.4 48 0.001 27.5 3.5 38 39-78 57-94 (180)
53 cd00494 HMBS Hydroxymethylbila 34.9 38 0.00082 31.0 3.0 31 34-64 118-150 (292)
54 TIGR01548 HAD-SF-IA-hyp1 haloa 34.5 1.1E+02 0.0024 25.0 5.6 23 31-53 122-146 (197)
55 PHA02538 N capsid protein; Pro 34.5 1E+02 0.0022 29.1 5.8 98 103-206 229-337 (348)
56 cd04911 ACT_AKiii-YclM-BS_1 AC 33.4 41 0.00089 24.6 2.5 22 45-66 23-44 (76)
57 PRK05627 bifunctional riboflav 32.9 75 0.0016 29.0 4.7 35 41-77 73-107 (305)
58 PRK00072 hemC porphobilinogen 32.3 44 0.00096 30.6 3.0 31 34-64 122-154 (295)
59 PF06574 FAD_syn: FAD syntheta 32.1 49 0.0011 27.1 3.0 76 38-140 62-137 (157)
60 KOG3325 Membrane coat complex 31.2 3.2E+02 0.007 23.1 7.9 92 13-142 17-119 (183)
61 TIGR00603 rad25 DNA repair hel 30.8 99 0.0021 31.9 5.5 44 14-57 573-631 (732)
62 TIGR01551 major_capsid_P2 phag 30.3 1.3E+02 0.0028 28.1 5.7 98 103-206 218-326 (327)
63 PRK13843 conjugal transfer pro 29.7 81 0.0018 27.5 4.0 26 114-139 39-66 (207)
64 PF00107 ADH_zinc_N: Zinc-bind 29.6 93 0.002 23.3 4.1 31 32-62 15-45 (130)
65 PF09897 DUF2124: Uncharacteri 29.1 44 0.00095 27.7 2.2 39 108-149 81-120 (147)
66 TIGR00212 hemC porphobilinogen 27.6 58 0.0013 29.8 3.0 31 34-64 118-150 (292)
67 PF10288 DUF2392: Protein of u 27.4 11 0.00023 28.9 -1.5 45 168-213 39-97 (107)
68 PRK01066 porphobilinogen deami 27.3 58 0.0013 28.9 2.8 32 33-64 132-165 (231)
69 COG1492 CobQ Cobyric acid synt 27.2 29 0.00063 34.0 1.0 46 172-218 315-361 (486)
70 PRK11590 hypothetical protein; 25.2 4E+02 0.0087 22.2 8.2 34 105-138 141-174 (211)
71 PLN02691 porphobilinogen deami 25.0 68 0.0015 30.2 3.0 31 34-64 165-197 (351)
72 PF06690 DUF1188: Protein of u 22.6 1.6E+02 0.0034 26.5 4.6 35 69-108 16-50 (252)
73 TIGR01664 DNA-3'-Pase DNA 3'-p 21.7 2.4E+02 0.0053 22.9 5.4 39 20-60 49-102 (166)
74 COG1797 CobB Cobyrinic acid a, 21.7 3E+02 0.0066 26.8 6.7 113 32-144 246-373 (451)
75 COG5552 Uncharacterized conser 21.1 71 0.0015 23.7 1.8 17 125-141 21-37 (88)
76 COG4186 Predicted phosphoester 20.5 1.3E+02 0.0028 25.6 3.5 40 105-144 42-81 (186)
77 PRK08535 translation initiatio 20.1 3.1E+02 0.0068 25.0 6.2 78 50-145 143-230 (310)
78 PF08373 RAP: RAP domain; Int 20.0 79 0.0017 20.9 1.8 21 38-58 18-38 (58)
No 1
>PRK02141 Maf-like protein; Reviewed
Probab=100.00 E-value=2.6e-67 Score=451.99 Aligned_cols=190 Identities=24% Similarity=0.396 Sum_probs=179.4
Q ss_pred CCCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcc
Q 027128 30 TPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (228)
Q Consensus 30 ~~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aD 109 (228)
.+++|||||+||||++||+++|++|++++++|||+.+...+|.++|.++|++||++|++++.. .++.+|||||
T Consensus 7 ~~~~iILAS~SprR~elL~~~G~~f~v~~~~iDE~~~~~~~p~~~~~~lA~~KA~~v~~~l~~-------~~~~iVI~aD 79 (207)
T PRK02141 7 RPPRLILASSSRYRRELLERLRLPFDVVSPDIDETPLAGETPAATALRLAAAKARAVAATIDA-------PPGALVIGSD 79 (207)
T ss_pred CCCCEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcc-------CCCCEEEEeC
Confidence 567899999999999999999999999999999998888899999999999999999986532 1458999999
Q ss_pred eEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCcccee
Q 027128 110 TVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAG 189 (228)
Q Consensus 110 TvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG 189 (228)
|||++||+|||||.|.+||++||++|||++|+|||||||++..+++..+++++|+|+|++|++++|++||++++|+||||
T Consensus 80 TvV~~~g~ilgKP~~~~eA~~mL~~lsG~~H~V~Tgv~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yv~~~ep~dkAG 159 (207)
T PRK02141 80 QVATFDGLQIGKPGTHERALAQLQAMRGRTVEFHSALCLYDSRTGETQSEDVVTRVRFRTLTDAELDAYLRAETPYDVAG 159 (207)
T ss_pred eEEEECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHccCCCCceee
Confidence 99999999999999999999999999999999999999997667788899999999999999999999999999999999
Q ss_pred eeeecccCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 027128 190 GLIIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 190 ~Y~Iqg~~g~~~i~~I~G-~~~nVvGLPl~~l~~~L~~~ 227 (228)
||+||| .|+.||++|+| ||+||||||+..++++|++.
T Consensus 160 aY~IQg-~g~~li~~I~Gd~y~nVvGLPl~~l~~~L~~~ 197 (207)
T PRK02141 160 SAKSEG-LGIALLDAIDSDDPTALVGLPLIALTRMLRAA 197 (207)
T ss_pred eeeccC-ChhheEEEEEECCCCcCCCcCHHHHHHHHHHc
Confidence 999999 89999999999 89999999999999999763
No 2
>PRK00078 Maf-like protein; Reviewed
Probab=100.00 E-value=4e-67 Score=446.39 Aligned_cols=187 Identities=30% Similarity=0.456 Sum_probs=176.4
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcce
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIR-KEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~-~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDT 110 (228)
|+|||||+||||++||+++|++|++++++|||+.+. ..+|.++|.++|++||++|++++.. ++.+||||||
T Consensus 1 ~~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~~p~~~~~~lA~~KA~~v~~~~~~--------~~~lvI~aDT 72 (192)
T PRK00078 1 MKIILASASERRQELLKRILEDFQVIVSDFDESSVPFKGNIESYVMNLAEGKARSVSKKLDQ--------ESSIVIGCDT 72 (192)
T ss_pred CcEEEeCCCHHHHHHHHhCCCCeEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------CCCEEEEeCe
Confidence 579999999999999999999999999999999766 4689999999999999999887631 3479999999
Q ss_pred EEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceee
Q 027128 111 VVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGG 190 (228)
Q Consensus 111 vV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~ 190 (228)
||++||+|+|||.|.+||++||++|||++|+|||||||++..+++.++++++|+|+|++|++++|++||++|+|+|||||
T Consensus 73 vV~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yi~~~ep~dkAG~ 152 (192)
T PRK00078 73 IVAFNGKVLGKPKDEEDAFEMLKALSGNEHEVYSGIAILDTKSNKIIKDFVCTEVKFSKLTDRQIRKYINTGEPMDKAGA 152 (192)
T ss_pred EEEECCEEeCCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCHHHHHHHHcCCCcccEeeE
Confidence 99999999999999999999999999999999999999976678888999999999999999999999999999999999
Q ss_pred eeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 191 LIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 191 Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|+||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 153 y~Iqg-~g~~li~~I~G~y~nV~GLPl~~l~~~L~~~ 188 (192)
T PRK00078 153 YGIQG-KGGVFVEEINGCYYNVVGLPLNKLYKMLEEM 188 (192)
T ss_pred EEEcC-ChhhcEeecCCCCCcCCCcCHHHHHHHHHHc
Confidence 99999 8999999999999999999999999999864
No 3
>PRK14368 Maf-like protein; Provisional
Probab=100.00 E-value=3.6e-67 Score=446.89 Aligned_cols=188 Identities=29% Similarity=0.407 Sum_probs=178.8
Q ss_pred CCCCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEc
Q 027128 29 ATPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (228)
Q Consensus 29 ~~~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~a 108 (228)
+.+.+|||||+||||++||+++|++|++++++|||+.+.+.+|.++|.++|..||++|+++++ +.+||||
T Consensus 2 ~~~~~lILAS~SprR~eLL~~~g~~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~----------~~~vI~a 71 (193)
T PRK14368 2 MANSPIVLASASPRRSELLASAGIEFDVVPADIPEEPLPGEEPVDHVLRLAREKARAAAALAE----------GRFFIGA 71 (193)
T ss_pred CCCCcEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEe
Confidence 346789999999999999999999999999999999888889999999999999999988743 5799999
Q ss_pred ceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccce
Q 027128 109 DTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVA 188 (228)
Q Consensus 109 DTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kA 188 (228)
||||++||+|+|||.|.+||++||++|||++|+|+|||||++..++..++++++|+|+|++|++++|++||++++|+|||
T Consensus 72 DTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~v~Tgv~l~~~~~~~~~~~~~~t~V~f~~l~~~~I~~Yl~~~ep~dkA 151 (193)
T PRK14368 72 DTIVVCDGEIMGKPKDEADAVRMLKKLSGVPHEVITGFAVYDRERDGCVTKAVRTKVFFKPLRDEEIRDYIATGCPMDKA 151 (193)
T ss_pred CcEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCCEEEEEEEEEEEEECCCCHHHHHHHHhcCCcccEe
Confidence 99999999999999999999999999999999999999999777777889999999999999999999999999999999
Q ss_pred eeeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 189 GGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 189 G~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|||+||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 152 Gay~Iqg-~g~~li~~I~Gdy~nV~GLPl~~l~~~L~~~ 189 (193)
T PRK14368 152 GAYAIQG-GAAHMVRKIDGSYTNVVGLPLCEVVEALRTI 189 (193)
T ss_pred eeehhcC-ChhhcEeeeECCCCcccCcCHHHHHHHHHHc
Confidence 9999999 7999999999999999999999999999864
No 4
>PRK00884 Maf-like protein; Reviewed
Probab=100.00 E-value=9.2e-67 Score=444.71 Aligned_cols=185 Identities=25% Similarity=0.439 Sum_probs=176.4
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceE
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTV 111 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTv 111 (228)
.+|||||+||||++||+++|++|++++++|||+.+.+.+|.++|.++|.+||++|+++++ +.+|||||||
T Consensus 2 ~~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~v~~lA~~KA~~v~~~~~----------~~~VI~aDTv 71 (194)
T PRK00884 2 PQLILASTSPYRRALLEKLQLPFECAAPEVDETPRPGESPRQLVLRLAQEKAQSLASRYP----------DHLIIGSDQV 71 (194)
T ss_pred CCEEEeCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhCC----------CCEEEEeCeE
Confidence 379999999999999999999999999999999888889999999999999999988653 4799999999
Q ss_pred EEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeee
Q 027128 112 VVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGL 191 (228)
Q Consensus 112 V~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y 191 (228)
|++||+|+|||.|.+||++||++|||++|+|||||||++..+++.++++++|+|+|++|++++|++||++++|+||||||
T Consensus 72 V~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~ep~dkAGay 151 (194)
T PRK00884 72 CVLDGEITGKPLTEENARAQLRKASGNIVTFYTGLALFNSATGHLQTEVEPFDVHFRHLSEAEIDRYVRKEHPLHCAGSF 151 (194)
T ss_pred EEECCEEecCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhhCCCcceeeeE
Confidence 99999999999999999999999999999999999999766777889999999999999999999999999999999999
Q ss_pred eecccCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 027128 192 IIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 192 ~Iqg~~g~~~i~~I~G-~~~nVvGLPl~~l~~~L~~~ 227 (228)
+||| .|+.||++|+| ||+||||||+..++++|++.
T Consensus 152 ~IQg-~g~~li~~I~G~dy~nVvGLPl~~l~~~L~~~ 187 (194)
T PRK00884 152 KSEG-LGITLFERLEGRDPNTLVGLPLIALCQMLRRE 187 (194)
T ss_pred eecC-ChhheEEEeEECCCCcCCCCCHHHHHHHHHHc
Confidence 9999 89999999999 99999999999999999863
No 5
>PRK00148 Maf-like protein; Reviewed
Probab=100.00 E-value=1.3e-66 Score=443.79 Aligned_cols=185 Identities=28% Similarity=0.427 Sum_probs=177.2
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceE
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTV 111 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTv 111 (228)
++|||||+||||++||+++|++|++++++|||+.+...+|.++|.++|++||++|+++++ +.+|||||||
T Consensus 1 ~~iILAS~SprR~elL~~~g~~f~~~~~~idE~~~~~~~p~~~v~~lA~~KA~~v~~~~~----------~~~vI~aDTv 70 (194)
T PRK00148 1 TRLVLASASPARLKLLRLAGIPPLVVVSHVDEDAIAASSPSELVQALARAKAEAVAENAP----------DAVVLGCDSM 70 (194)
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeCcE
Confidence 479999999999999999999999999999999888889999999999999999988653 4799999999
Q ss_pred EEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeee
Q 027128 112 VVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGL 191 (228)
Q Consensus 112 V~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y 191 (228)
|++||+|+|||.|.+||++||++|||++|.|||||||++..+++.++++++|+|+|++|++++|++||++++|+||||||
T Consensus 71 V~~~g~Il~KP~~~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~T~V~F~~l~~~~I~~Yl~~~e~~dkAGay 150 (194)
T PRK00148 71 LLIDGRLLGKPHTPEEAIERWQQMSGRTGELYTGHALIDLDQGKTVTFYERTEVHFAELSDEEIEAYVATGEPLDCAGAF 150 (194)
T ss_pred EEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhhCCccceeeEE
Confidence 99999999999999999999999999999999999999877778899999999999999999999999999999999999
Q ss_pred eecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 192 IIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 192 ~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
+||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 151 ~Iqg-~g~~~i~~I~G~~~nV~GLPl~~l~~~L~~~ 185 (194)
T PRK00148 151 TLQG-LGGWFVDKIEGDPSNVIGLSLPLLRRLLKRF 185 (194)
T ss_pred Eecc-ChhhcEEeeECCcccccCCCHHHHHHHHHHc
Confidence 9999 8999999999999999999999999999863
No 6
>TIGR00172 maf MAF protein. This nonessential gene causes inhibition of septation when overexpressed. A member of the family is found in the Archaeon Pyrococcus horikoshii and another in the round worm Caenorhabditis elegans.
Probab=100.00 E-value=1.9e-66 Score=439.26 Aligned_cols=182 Identities=32% Similarity=0.502 Sum_probs=173.2
Q ss_pred CCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcce
Q 027128 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (228)
Q Consensus 31 ~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDT 110 (228)
+++|||||+||||++||+++|++|++++++|||+.++..+|.+||.++|.+||++|+++++ +.+||||||
T Consensus 2 ~~~lILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~~~~lA~~Ka~~v~~~~~----------~~~vI~aDT 71 (183)
T TIGR00172 2 TKELILASQSPRRKELLEELGISFEQIVSEFDEKSLKTTSPRELVYRLAKEKAQAVAELLA----------DALIIGADT 71 (183)
T ss_pred CCCEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeCe
Confidence 4579999999999999999999999999999999988889999999999999999988764 469999999
Q ss_pred EEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceee
Q 027128 111 VVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGG 190 (228)
Q Consensus 111 vV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~ 190 (228)
||++||+|+|||.|.+||++||++|||++|+|+|||||+.. ++.++++++|+|+|+++++++|++||++|+|+|||||
T Consensus 72 vV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~--~~~~~~~~~t~v~f~~l~~~~I~~Yl~~~e~~dkAGa 149 (183)
T TIGR00172 72 VVILDGEIYGKPKDKEEAAEFLRKLSGQEHEVYTAVALIDS--VHLLTFLDVTKVHFRALDPEEIEKYVESGEPLEKAGA 149 (183)
T ss_pred EEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEEC--CEEEEEEEEEEEEECCCCHHHHHHHHhcCCCcceeeE
Confidence 99999999999999999999999999999999999999853 3678899999999999999999999999999999999
Q ss_pred eeecccCcccceeeeecccCCcccCCHHHHHHHHH
Q 027128 191 LIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIK 225 (228)
Q Consensus 191 Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~ 225 (228)
|+||| .|+.||++|+|||+||||||+..++++|.
T Consensus 150 y~Iqg-~g~~li~~I~Gd~~nV~GLPl~~l~~~L~ 183 (183)
T TIGR00172 150 FGIEG-FGAPLIKKIDGDYSNVVGLPLEKLLGALR 183 (183)
T ss_pred EEecc-ChhheEeeeECCcccccCCCHHHHHHHhC
Confidence 99999 89999999999999999999999999884
No 7
>COG0424 Maf Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.2e-66 Score=440.23 Aligned_cols=185 Identities=33% Similarity=0.524 Sum_probs=176.9
Q ss_pred CCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcce
Q 027128 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (228)
Q Consensus 31 ~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDT 110 (228)
+++|||||+||||++||+++||+|++++++|||.......|.+||+++|+.||++|+++++ ++.+||||||
T Consensus 2 ~~~LiLAS~SPrR~elL~~~gi~f~~~~~~iDE~~~~~~~P~~~v~~LA~~KA~~va~~~~---------~~~~VigaDt 72 (193)
T COG0424 2 MPRLILASSSPRRRELLEQLGIPFEVIPSDIDEPLLKAEEPREYVLRLAEEKARAVAARLP---------PDALVIGADT 72 (193)
T ss_pred CccEEEecCCHHHHHHHHHCCCCeEEecCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCC---------CCCEEEecCe
Confidence 4689999999999999999999999999999999888777999999999999999999875 2589999999
Q ss_pred EEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceee
Q 027128 111 VVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGG 190 (228)
Q Consensus 111 vV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~ 190 (228)
||++||+|+|||.|.+||++||++|||++|+|+||+||++..+ +.+..+++|+|+|++||+++|++||++|||+|||||
T Consensus 73 vv~ldgrilgKP~~~~eA~~~L~~lSG~~h~v~T~v~li~~~~-~~~~~~~~t~V~F~~ls~~~I~~Yv~sgepl~kAGa 151 (193)
T COG0424 73 VVVLDGRILGKPKDEEEAREMLRKLSGRTHQVYTGVALIDPGK-RVQSEVEVTKVRFRTLSDEEIEAYVASGEPLDKAGA 151 (193)
T ss_pred EEEECCEEecCCCCHHHHHHHHHHhcCCeEEEEEEEEEEECCC-eEEEEEEEEEEEEccCCHHHHHHHHHcCCcccccce
Confidence 9999999999999999999999999999999999999997654 688899999999999999999999999999999999
Q ss_pred eeecccCcccceeeeecccCCcccCCHHHHHHHHHH
Q 027128 191 LIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 226 (228)
Q Consensus 191 Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~ 226 (228)
|+||| .|+.||++|+|||+||||||+..+.++|.+
T Consensus 152 y~iqG-~G~~fie~IeGdy~~vvGLPL~~l~~~L~~ 186 (193)
T COG0424 152 YGIQG-LGGLFIEKIEGDYSNVVGLPLPELVQLLRE 186 (193)
T ss_pred EEeec-ccceEEEEeecCcccccCccHHHHHHHHHH
Confidence 99999 899999999999999999999999999986
No 8
>PRK00032 Maf-like protein; Reviewed
Probab=100.00 E-value=3.9e-66 Score=439.60 Aligned_cols=183 Identities=26% Similarity=0.393 Sum_probs=173.7
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEE
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVV 112 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV 112 (228)
+|||||+||||++||+++|++|++++++|||+.+.+.+|.++|.++|++||++|++++. ++.+||||||||
T Consensus 3 ~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~v~~lA~~KA~~v~~~~~---------~~~~vI~aDTvV 73 (190)
T PRK00032 3 SLYLASGSPRRRELLTQLGVPFEVLVPGIEEQRQPGESAQQYVERLARDKAQAGVALAP---------QDLPVLGADTIV 73 (190)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCCEEEEeCeEE
Confidence 79999999999999999999999999999999888889999999999999999988642 357999999999
Q ss_pred EECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeee
Q 027128 113 VYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLI 192 (228)
Q Consensus 113 ~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~ 192 (228)
++||+|+|||.|.+||++||++|||++|+|+|||||+. .+..+.++++|+|+|+++++++|++||++|+|+||||||+
T Consensus 74 ~~~g~IlgKP~~~eeA~~~L~~lsG~~h~v~T~v~l~~--~~~~~~~~~~t~V~F~~l~~~~I~~Yv~~~ep~dkAG~y~ 151 (190)
T PRK00032 74 VLDGEVLEKPRDAADAAAMLRALSGRTHQVMTAVALAD--SQRILSCLVVTDVTFRTLSDEEIARYWASGEPLDKAGAYG 151 (190)
T ss_pred EECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEE--CCeEEEEEEEEEEEECcCCHHHHHHHHhcCCccceeeeEE
Confidence 99999999999999999999999999999999999985 4566789999999999999999999999999999999999
Q ss_pred ecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 193 IEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 193 Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
||| .|+.||++|+|||+||||||+..++++|.+.
T Consensus 152 Iqg-~g~~li~~I~G~~~nVvGLPl~~l~~~L~~~ 185 (190)
T PRK00032 152 IQG-LGGCFVRKINGSYHAVVGLPLVETAELLSNF 185 (190)
T ss_pred ecc-ChhhcEeeeECCCCcccCCCHHHHHHHHHHc
Confidence 999 8999999999999999999999999999864
No 9
>PRK14366 Maf-like protein; Provisional
Probab=100.00 E-value=5.1e-66 Score=440.39 Aligned_cols=184 Identities=28% Similarity=0.346 Sum_probs=173.4
Q ss_pred CeEEEecCCHHHHHHHHhcCC-ceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcce
Q 027128 32 VKIILGSSSMPRRKILAEMGY-EFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi-~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDT 110 (228)
.+|||||+||||++||+++|+ .|++++++|||+.+++.+|.+||.++|++||++|+++++ +.+||||||
T Consensus 5 ~~iILAS~SprR~elL~~~G~~~~~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~----------~~~vI~ADT 74 (195)
T PRK14366 5 DNLILASSSKQRLALLEQIGVVPGEIVSPDIDESPLKKELPKDYSIRMAKEKAEKVQSLRP----------DKFVLGADT 74 (195)
T ss_pred CeEEEeCCCHHHHHHHHhCCCCCCEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeCe
Confidence 479999999999999999999 568999999999888889999999999999999987643 479999999
Q ss_pred EEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceee
Q 027128 111 VVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGG 190 (228)
Q Consensus 111 vV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~ 190 (228)
||++||+|+|||.|.+||++||++|||++|+|+|||||+. .+++.++++++|+|+|+++++++|++||++|+|+|||||
T Consensus 75 vV~~~g~ilgKP~~~eeA~~mL~~lsG~~h~V~Tgv~l~~-~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~ep~dkAGa 153 (195)
T PRK14366 75 VVCCGRRILLKAETEEQAEEYLELLSGRRHRVYTSVCLYT-PGGKLHIRSVVTVVKFKRLSKQEIKYYIASGEWKGKAGG 153 (195)
T ss_pred EEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEE-CCCeEEEEEEEEEEEECCCCHHHHHHHHhcCCccceeee
Confidence 9999999999999999999999999999999999999985 445667899999999999999999999999999999999
Q ss_pred eeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 191 LIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 191 Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 154 y~Iqg-~g~~li~~I~Gdy~nVvGLPl~~~~~~L~~~ 189 (195)
T PRK14366 154 CNIQG-LAGKFVLSINGSYSSIIGLPLHETYCLLSGY 189 (195)
T ss_pred EeecC-ChhhcEeeeECCCCcccCcCHHHHHHHHHHH
Confidence 99999 8999999999999999999999999999874
No 10
>PRK04056 Maf-like protein; Reviewed
Probab=100.00 E-value=2.8e-66 Score=437.21 Aligned_cols=180 Identities=29% Similarity=0.438 Sum_probs=170.9
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEE
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVV 112 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV 112 (228)
.|||||+||||++||+++|++|++++++|||+.+++.+|.+||.++|++||++|+++++ ++.+||||||||
T Consensus 1 ~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~---------~~~~vI~aDTvV 71 (180)
T PRK04056 1 MIILASSSSTRANLLKEAGIEFEQKSLDFDEESIKKTSPKEFVYLAVKGKLEQFLKKYG---------NECNLLVADSVV 71 (180)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC---------CCCEEEEeCEEE
Confidence 38999999999999999999999999999999888889999999999999999998864 236999999999
Q ss_pred EECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeee
Q 027128 113 VYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLI 192 (228)
Q Consensus 113 ~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~ 192 (228)
++||+|+|||.|.+||++||++|||++|+|+|||||++ +++.++++++|+|+|+++++++|++||++|+|+||||||+
T Consensus 72 ~~~g~ilgKP~~~~eA~~~L~~lsg~~h~V~T~v~l~~--~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~dkAG~y~ 149 (180)
T PRK04056 72 SCGNKILRKAKDKEEAREMLKLQSGNEISVLTCMILKS--PEKEWLDLSVTTYRFKKFDEDDLEKYLESGLWQGKAGACM 149 (180)
T ss_pred EECCEEecCCCCHHHHHHHHHHHCCCcEEEEEEEEEEE--CCeEEEEEEEEEEEECCCCHHHHHHHHhcCCccceeeeeh
Confidence 99999999999999999999999999999999999985 4567889999999999999999999999999999999999
Q ss_pred ecccCcccceeeeecccCCcccCCHHHHHHHH
Q 027128 193 IEHSLILPYVKQVVGAMDSVMGLPKAVTEKLI 224 (228)
Q Consensus 193 Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L 224 (228)
||| .|+.||++|+|||+||||||+..++++|
T Consensus 150 Iqg-~g~~li~~I~G~y~nVvGLPl~~l~~~L 180 (180)
T PRK04056 150 VEG-FHKKYIKSVSGNESTAMGLNVEKLKGFL 180 (180)
T ss_pred hcC-ChhhcEEeeECCCCcCCCCCHHHHHhhC
Confidence 999 8999999999999999999999998875
No 11
>PRK00234 Maf-like protein; Reviewed
Probab=100.00 E-value=7.4e-66 Score=438.60 Aligned_cols=184 Identities=28% Similarity=0.380 Sum_probs=175.5
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEE
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVV 112 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV 112 (228)
+|||||+||||++||+++|++|++++++|||+.+.+.+|.+||.++|++||++|+++++ +.+||||||||
T Consensus 3 ~iILAS~SprR~elL~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~----------~~~vI~aDTvV 72 (192)
T PRK00234 3 PLLLASSSPYRRELLARLRLPFTWASPDIDESHRPDESAEELVRRLARQKAEALAGSHP----------QHLIIGSDQVA 72 (192)
T ss_pred CEEEecCCHHHHHHHHHCCCCcEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhCC----------CCEEEEeCeEE
Confidence 79999999999999999999999999999999998889999999999999999988753 47999999999
Q ss_pred EECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeee
Q 027128 113 VYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLI 192 (228)
Q Consensus 113 ~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~ 192 (228)
++||+|+|||.|.+||++||++|||++|.|+|||||++..++..+.++++|+|+|+++++++|++||++|+|+||||||+
T Consensus 73 ~~~g~Il~KP~~~~eA~~mL~~lsG~~h~V~T~v~l~~~~~~~~~~~~~~t~v~f~~l~~~~I~~Yl~~ge~~dkAG~y~ 152 (192)
T PRK00234 73 VLGGQILGKPHTFERAREQLLAASGQSVTFLTGLALLNSATGHCQVDCVPFTVHMRELDRARIERYLEAEQPLDCAGSFK 152 (192)
T ss_pred EeCCEECCCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhcCCcccceeEEe
Confidence 99999999999999999999999999999999999997666777889999999999999999999999999999999999
Q ss_pred ecccCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 027128 193 IEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 193 Iqg~~g~~~i~~I~G-~~~nVvGLPl~~l~~~L~~~ 227 (228)
||| .|+.||++|+| ||+||||||+..++++|.+.
T Consensus 153 Iqg-~g~~li~~i~G~dy~nVvGLPl~~l~~~L~~~ 187 (192)
T PRK00234 153 AEG-LGVSLFRSTEGEDATSLIGLPLIRLVDMLLKE 187 (192)
T ss_pred ecc-ChhhEEEEEEEcCCCcCCCCCHHHHHHHHHHc
Confidence 999 89999999999 99999999999999999763
No 12
>PRK14362 Maf-like protein; Provisional
Probab=100.00 E-value=4.9e-66 Score=444.09 Aligned_cols=185 Identities=29% Similarity=0.404 Sum_probs=173.4
Q ss_pred CCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcc
Q 027128 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKS-IRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (228)
Q Consensus 31 ~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~-~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aD 109 (228)
..+|||||+||||++||+++|++|+++++++||+. ..+.+|.+||.++|++||++|+++++ +++|||||
T Consensus 11 ~~~iILAS~SprR~eLL~~~g~~f~v~~~~~dEe~~~~~~~p~~~v~~lA~~KA~~v~~~~~----------~~~VI~AD 80 (207)
T PRK14362 11 ACPVVLASGSPRRREFLEQMGLPFEVILPGAAEPSPIEGEQPEAYARRAAEAKARAVAADHA----------GRLVIAAD 80 (207)
T ss_pred CceEEEeCCCHHHHHHHHHCCCCcEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeC
Confidence 45799999999999999999999999999999954 56778999999999999999988753 47999999
Q ss_pred eEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCcccee
Q 027128 110 TVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAG 189 (228)
Q Consensus 110 TvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG 189 (228)
|||++||+|+|||.|.+||++||++|||++|+|+|||||.. .++..+.++++|+|+|++|++++|++||++|+|+||||
T Consensus 81 TvV~~~g~ilgKP~~~eeA~~~L~~lsG~~H~V~Tgv~l~~-~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~ep~dkAG 159 (207)
T PRK14362 81 TVVALDGMILGKPADRADALSMLRRLAGRTHEVVSACCVVL-PDGGREVFHAITRVTMWDWPEAALAAYVATGEPSDKAG 159 (207)
T ss_pred eEEEeCCEEcCCCCCHHHHHHHHHHhCCCceEEEEEEEEEE-CCCcEEEEEEEEEEEECCCCHHHHHHHHhcCCccceee
Confidence 99999999999999999999999999999999999999985 34567889999999999999999999999999999999
Q ss_pred eeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 190 GLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 190 ~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
||+||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 160 ~Y~IQg-~g~~li~~I~G~y~nVvGLPl~~l~~~L~~~ 196 (207)
T PRK14362 160 AYGIQG-IGAFLVRSIEGSWSNVVGLPVAELTALLLRR 196 (207)
T ss_pred eEeecC-ChhhcEeeeECCCCcccCCCHHHHHHHHHHC
Confidence 999999 7999999999999999999999999999863
No 13
>PRK04694 Maf-like protein; Reviewed
Probab=100.00 E-value=7.2e-66 Score=438.03 Aligned_cols=187 Identities=24% Similarity=0.330 Sum_probs=174.6
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEE
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVV 112 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV 112 (228)
.|||||+||||++||+++|++|++++++|||+..++.+|.+||.++|.+||++|++++... .++.+||||||||
T Consensus 1 mlILAS~SprR~elL~~~g~~f~~~~~~idE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~------~~~~lvI~aDTvv 74 (190)
T PRK04694 1 MLYLASRSPRRRELLQRLDVPFQTLQLDVPEVRAADESPDHYVQRVALEKAHAGLALVQAA------DADAIVLGSDTEV 74 (190)
T ss_pred CEEEcCCCHHHHHHHHHCCCCcEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhcc------CCCCEEEEeCeEE
Confidence 3899999999999999999999999999999988888999999999999999998876321 1358999999999
Q ss_pred EECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeee
Q 027128 113 VYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLI 192 (228)
Q Consensus 113 ~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~ 192 (228)
++||+|+|||.|.+||++||++|||++|+|+|||||+. .++..+.++++|+|+|+++++++|++||++|+|+||||||+
T Consensus 75 ~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~-~~~~~~~~~~~t~V~F~~ls~~~I~~Yv~~~ep~dkAG~y~ 153 (190)
T PRK04694 75 VLGERVFGKPVDVDDAIAMLRALSGRTHQVLTAVVLVC-AQRAPAQALVVSEVTFDLLDDAQIAAYAASGEPMGKAGAYA 153 (190)
T ss_pred EECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEE-CCccEEEEEEEEEEEECCCCHHHHHHHHcCCCccceeeeeh
Confidence 99999999999999999999999999999999999985 44556788999999999999999999999999999999999
Q ss_pred ecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 193 IEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 193 Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 154 Iqg-~g~~li~~I~Gdy~nV~GLPl~~l~~~L~~~ 187 (190)
T PRK04694 154 IQG-RAERFIRHLSGSYSGVMGLPLYQTSQLLTAF 187 (190)
T ss_pred hcC-ChhhcEeeeECCCCcccCcCHHHHHHHHHhc
Confidence 999 8999999999999999999999999999863
No 14
>PRK14367 Maf-like protein; Provisional
Probab=100.00 E-value=1.6e-65 Score=439.57 Aligned_cols=189 Identities=28% Similarity=0.436 Sum_probs=175.0
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEE
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVV 112 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV 112 (228)
+|||||+||||++||+++|++|++++++|||+.....+|.+||.++|++||++|++++...+. ..++.+||||||||
T Consensus 3 ~iILAS~SprR~eLL~~~Gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~---~~~~~~vI~aDTvV 79 (202)
T PRK14367 3 TLYLGSNSPRRMEILTQLGYRVVKLPAGIDETVKAGETPARYVQRMAEEKNRTALTLFCETNG---TMPDFPLITADTCV 79 (202)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhccccc---cCCCCEEEEeCcEE
Confidence 799999999999999999999999999999998888899999999999999999876532111 01457999999999
Q ss_pred EECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeee
Q 027128 113 VYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLI 192 (228)
Q Consensus 113 ~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~ 192 (228)
++||+|+|||.|.+||++||++|||++|+|+|||||+. +++.+.++++|+|+|++|++++|++||++|+|+||||||+
T Consensus 80 ~~dg~IlgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~--~~~~~~~~~~T~V~f~~ls~~~I~~Yv~~~e~~dkAGay~ 157 (202)
T PRK14367 80 VSDGIILGKPRSQAEAIEFLNRLSGKQHTVLTAVCIHY--RGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYA 157 (202)
T ss_pred EECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEE--CCEEEEEEEEEEEEECCCCHHHHHHHHhcCCccceeeeEe
Confidence 99999999999999999999999999999999999984 4677889999999999999999999999999999999999
Q ss_pred ecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 193 IEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 193 Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 158 Iqg-~g~~~v~~I~G~y~nVvGLPl~~l~~~L~~~ 191 (202)
T PRK14367 158 VQG-IGGIFIQSIEGSFSGIMGLPVYETVSMLQDL 191 (202)
T ss_pred ecC-ChhhcEeeeECCCccccCCCHHHHHHHHHHc
Confidence 999 8999999999999999999999999999864
No 15
>PRK01526 Maf-like protein; Reviewed
Probab=100.00 E-value=1.7e-65 Score=440.24 Aligned_cols=189 Identities=26% Similarity=0.344 Sum_probs=175.5
Q ss_pred CCCCeEEEecCCHHHHHHHHhcCC-ceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEE
Q 027128 29 ATPVKIILGSSSMPRRKILAEMGY-EFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (228)
Q Consensus 29 ~~~~~iILAS~SprR~~lL~~~gi-~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~ 107 (228)
+...+|||||+||||++||+++|+ .|++++++|||+.+...+|.++|.++|.+||++|+++++ ++.+|||
T Consensus 5 ~~~~~lILAS~SprR~elL~~~g~~~~~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~---------~~~~VI~ 75 (205)
T PRK01526 5 RKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEKAIKIASQIE---------ESAIIIA 75 (205)
T ss_pred CCCCEEEEeCCCHHHHHHHHhcCCCCceEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC---------CCCEEEE
Confidence 334789999999999999999999 556999999999888889999999999999999998753 2579999
Q ss_pred cceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCe--EEEEEEEEEEEEcCCCHHHHHHHHHcCCCc
Q 027128 108 ADTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGF--RKGEWDRVEIQFHEIPDEVIEKLIEEGIVL 185 (228)
Q Consensus 108 aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~--~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~ 185 (228)
|||||++||+|+|||.|.+||++||++|||++|+|+|||||++...+. .++++++|+|+|++|++++|++||++|+|+
T Consensus 76 aDTvV~~~g~IlgKP~~~~eA~~mL~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~ 155 (205)
T PRK01526 76 ADTVAAVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKENDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGI 155 (205)
T ss_pred eCeEEEECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEECCCCceEEEEEEEEEEEEECCCCHHHHHHHHhcCCCc
Confidence 999999999999999999999999999999999999999999754443 467999999999999999999999999999
Q ss_pred cceeeeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 186 NVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 186 ~kAG~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
||||||+||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 156 dkAGaY~Iqg-~g~~li~~I~Gd~~nV~GLPl~~l~~~L~~~ 196 (205)
T PRK01526 156 DKAGGCKISG-YAEAFISFISGSYSNVMGLPLFETVNALTSL 196 (205)
T ss_pred CEeeeehhcC-ChhhcEeeeECCCCcccCcCHHHHHHHHHHc
Confidence 9999999999 8999999999999999999999999999863
No 16
>PRK04425 Maf-like protein; Reviewed
Probab=100.00 E-value=3.3e-65 Score=435.78 Aligned_cols=186 Identities=20% Similarity=0.335 Sum_probs=177.0
Q ss_pred CCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcce
Q 027128 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (228)
Q Consensus 31 ~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDT 110 (228)
.++|||||+||||++||+++|++|++++++|||+.+.+.+|.++|.++|++||++++++++ +.+||||||
T Consensus 4 ~~~iILAS~SprR~elL~~~g~~f~v~~~~iDE~~~~~~~p~~~~~~lA~~KA~~v~~~~~----------~~lvI~aDT 73 (196)
T PRK04425 4 ELPLVLGTSSVFRREQMERLGIAFQAASPDFDETPMLGESAPQTALRLAEGKARSLTGRFP----------EALIVGADQ 73 (196)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhCC----------CCEEEEeCe
Confidence 5689999999999999999999999999999999888889999999999999999987643 479999999
Q ss_pred EEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcC-CCcccee
Q 027128 111 VVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEG-IVLNVAG 189 (228)
Q Consensus 111 vV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tg-e~~~kAG 189 (228)
||++||+|+|||.|.+||++||++|||++|+|+|||||++..++..++++++|+|+|++|++++|++||+++ +|+||||
T Consensus 74 vV~~~g~ilgKP~~~eeA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~~~~~dkAG 153 (196)
T PRK04425 74 VAWCDGRQWGKPMNLANAQKMLMHLSGREIEFYSALVLLNTVTGRMQRHIDKTVVVMRQLDELHILRYLEREPDAVYCSC 153 (196)
T ss_pred EEEECCEEecCCCCHHHHHHHHHHhCCCcEEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhCCCCccccee
Confidence 999999999999999999999999999999999999999867778888999999999999999999999996 8999999
Q ss_pred eeeecccCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 027128 190 GLIIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 190 ~Y~Iqg~~g~~~i~~I~G-~~~nVvGLPl~~l~~~L~~~ 227 (228)
||+||| .|+.||++|+| ||+||||||+..++++|++.
T Consensus 154 ay~iqg-~g~~li~~I~G~~~~nVvGLPl~~l~~~L~~~ 191 (196)
T PRK04425 154 AAKSEG-LGALLIERIESTDPNALIGLPVFRLVDFLKNE 191 (196)
T ss_pred EEEecc-ChhhEEEEEEeCCCCcCCCCCHHHHHHHHHHc
Confidence 999999 89999999999 89999999999999999874
No 17
>PRK14361 Maf-like protein; Provisional
Probab=100.00 E-value=2.6e-65 Score=433.64 Aligned_cols=180 Identities=29% Similarity=0.443 Sum_probs=170.7
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEEE
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVVV 113 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~ 113 (228)
|||||+||||++||+++|++|+++++++||+. .+.+|.+||.++|++||++|+.+++ +.+||||||||+
T Consensus 1 lILAS~SprR~elL~~~g~~f~v~~~~~dE~~-~~~~p~~~v~~lA~~Ka~~v~~~~~----------~~~vI~aDTvV~ 69 (187)
T PRK14361 1 VILASGSPRRRELLENLGVPFQVVVSGEAEDS-TETDPARLAAELALLKARAVARLHP----------DAVVIAADTVVA 69 (187)
T ss_pred CEEccCCHHHHHHHHHCCCCcEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeCeEEE
Confidence 69999999999999999999999999999987 5678999999999999999987643 479999999999
Q ss_pred ECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeeee
Q 027128 114 YEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLII 193 (228)
Q Consensus 114 ~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~I 193 (228)
+||+|+|||.|.+||++||++|||++|+|+||||++. +++.+.++++|+|+|+++++++|++||++|+|+||||||+|
T Consensus 70 ~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~T~v~l~~--~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~dkAG~y~I 147 (187)
T PRK14361 70 LGGVLLAKPADEAENEAFLRVLSGRTHQVYTGVAVLS--RGTEQVGVERTDVTFRALTAAEISFYARSGEGLDKAGGYGI 147 (187)
T ss_pred ECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEE--CCEEEEEEEEEEEEECCCCHHHHHHHHhCCCCccceeEEEe
Confidence 9999999999999999999999999999999999985 45678899999999999999999999999999999999999
Q ss_pred cccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 194 EHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 194 qg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|| .|+.||++|+|||+||||||+..++++|++.
T Consensus 148 qg-~g~~~i~~I~G~y~nV~GLPl~~l~~~L~~~ 180 (187)
T PRK14361 148 QG-VGMALVSRVEGDYSNVVGFPLSLVIRLLRGA 180 (187)
T ss_pred cc-CccceEEEeECCCCceeCCCHHHHHHHHHHc
Confidence 99 8999999999999999999999999999863
No 18
>PRK00648 Maf-like protein; Reviewed
Probab=100.00 E-value=3.4e-65 Score=434.21 Aligned_cols=185 Identities=31% Similarity=0.420 Sum_probs=174.3
Q ss_pred CCeEEEecCCHHHHHHHHhcCCceEEE-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcc
Q 027128 31 PVKIILGSSSMPRRKILAEMGYEFSVM-AADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (228)
Q Consensus 31 ~~~iILAS~SprR~~lL~~~gi~f~v~-~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aD 109 (228)
.++|||||+||||++||+++|++|+++ ++++||+..+..+|.++|.++|++||++|++++. ++.+|||||
T Consensus 2 ~~~lILAS~SprR~elL~~~g~~f~v~~~~~~dE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~---------~~~~VI~aD 72 (191)
T PRK00648 2 KYKIILASSSPRRKEILEGFRIPFEVVPSPFVEESYPYSLDPEEITLELARLKAEAVRSDLF---------PDELIITAD 72 (191)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC---------CCCEEEEeC
Confidence 468999999999999999999999999 7899998878889999999999999999988642 357999999
Q ss_pred eEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCcccee
Q 027128 110 TVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAG 189 (228)
Q Consensus 110 TvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG 189 (228)
|||++||+|+|||.|.+||++||++|||++|+|+|||||+. +++.++++++|+|+|+++++++|++||++|+|+||||
T Consensus 73 TvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~v~T~v~l~~--~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~ep~dkAG 150 (191)
T PRK00648 73 TIVWYDGKVLGKPKDEEEAVEMLRTLSGKTHEVITGVCLLH--NGKLLSGSETTQVTFRELSDEEIEYYIDTYKPLDKAG 150 (191)
T ss_pred eEEEECCEEeCCCCCHHHHHHHHHHhCCCCeEEEEEEEEEE--CCEEEEEEEEEEEEECCCCHHHHHHHHcCCCccceee
Confidence 99999999999999999999999999999999999999984 4567889999999999999999999999999999999
Q ss_pred eeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 190 GLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 190 ~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
||+||| .|+.||++|+|||+||||||+..++++|++.
T Consensus 151 ~y~Iqg-~g~~~i~~I~Gd~~nV~GLPl~~l~~~L~~~ 187 (191)
T PRK00648 151 AYGIQE-WGGLIVKKIEGSYYNVMGLPIQTLYEELKEL 187 (191)
T ss_pred eehhcC-ChhheEEeeECCCCccCCCCHHHHHHHHHHc
Confidence 999999 8999999999999999999999999999864
No 19
>PRK14365 Maf-like protein; Provisional
Probab=100.00 E-value=4.4e-65 Score=435.36 Aligned_cols=184 Identities=27% Similarity=0.414 Sum_probs=176.2
Q ss_pred eEEEecCCHHHHHHHHhc-CCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceE
Q 027128 33 KIILGSSSMPRRKILAEM-GYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTV 111 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~-gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTv 111 (228)
+|||||+||||++||+++ |++|++++++|||+..++.+|.+++.++|..||++++++++ +.+|||||||
T Consensus 3 ~iILaSsSprR~elL~~~~g~~f~vi~~~idE~~~~~~~p~~~v~~lA~~KA~~v~~~~~----------~~~vI~aDTv 72 (197)
T PRK14365 3 RIILASASPRRKELLKQLIGDNFLVYPSSYEEPPQPGLDPEELLLKHSLEKARDVAKHFD----------SGIIISADTS 72 (197)
T ss_pred CEEEeCCCHHHHHHHhcCcCcCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeCeE
Confidence 699999999999999995 99999999999999998899999999999999999988754 4799999999
Q ss_pred EEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeee
Q 027128 112 VVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGL 191 (228)
Q Consensus 112 V~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y 191 (228)
|++||+|+|||.|.+||++||++|||++|+|||||||++..+++...++++|+|+|+++++++|++||++++|+||||||
T Consensus 73 V~~~g~Il~KP~~~~eA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~~T~V~f~~l~~~~I~~Yv~~~e~~dkAG~y 152 (197)
T PRK14365 73 VFCNGEVLGKPASPENAEEMLEKLSGRKFLVITGLTVLDLDSGKEISEIESTDVWMTELSREQILAYVRTGEPLDKAGAF 152 (197)
T ss_pred EEECCEEecCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhcCCccceeeeE
Confidence 99999999999999999999999999999999999999777788889999999999999999999999999999999999
Q ss_pred eecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 192 IIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 192 ~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
+||| .|+.||++|+|||+||||||+..++++|.+.
T Consensus 153 ~iq~-~g~~li~~I~G~~~nV~GLPl~~l~~~L~~~ 187 (197)
T PRK14365 153 AIQG-KGAVLVEKIEGDFFNVVGLPLFRLGKILEKL 187 (197)
T ss_pred Eecc-CccceEEeeEcCCccccCCCHHHHHHHHHHc
Confidence 9999 8999999999999999999999999999763
No 20
>PRK14364 Maf-like protein; Provisional
Probab=100.00 E-value=3e-65 Score=431.26 Aligned_cols=179 Identities=26% Similarity=0.404 Sum_probs=171.2
Q ss_pred EecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEEEEC
Q 027128 36 LGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVVVYE 115 (228)
Q Consensus 36 LAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~~d 115 (228)
|||+||||++||+++|++|++++++|||+.++..+|.+||.++|.+||++|+++++ +.+||||||||++|
T Consensus 1 LAS~SprR~elL~~~g~~f~v~~~~~dE~~~~~~~p~~~~~~lA~~KA~~v~~~~~----------~~~vI~aDTvV~~~ 70 (181)
T PRK14364 1 LASSSPRRRELLQQLGLNFEIYSPDIDESVHEGELVHQYVERLAREKAQAVLNIFP----------DSVIIAADTSLGLD 70 (181)
T ss_pred CCCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC----------CCEEEEeCeEEEEC
Confidence 89999999999999999999999999999988889999999999999999988753 47999999999999
Q ss_pred CEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeeeecc
Q 027128 116 GVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEH 195 (228)
Q Consensus 116 g~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~Iqg 195 (228)
|+|+|||.|.+||++||++|||++|+|+|||||.. .++.+.++++|+|+|+++++++|++||++|+|+||||||+|||
T Consensus 71 g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~--~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~dkAG~y~Iqg 148 (181)
T PRK14364 71 GQIIGKPDSKQHAFDIWKQLSGRWHDVFSGICIAT--QQQILSQVVQTQVEFASLTTQDMEDYWATGEPVGKAGAYAIQG 148 (181)
T ss_pred CEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEE--CCEEEEEEEEEEEEECCCCHHHHHHHHhcCCCcCcccCEEeec
Confidence 99999999999999999999999999999999984 4567889999999999999999999999999999999999999
Q ss_pred cCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 196 SLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 196 ~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
.|+.||++|+|||+||||||+..++++|++.
T Consensus 149 -~g~~li~~I~Gdy~nVvGLPl~~l~~~L~~~ 179 (181)
T PRK14364 149 -IASQYIPKIQGSYSNVVGLPLYEFSQLFKRV 179 (181)
T ss_pred -CceeeEEEeEcCCcceeCCCHHHHHHHHHhh
Confidence 8999999999999999999999999999875
No 21
>PRK01441 Maf-like protein; Reviewed
Probab=100.00 E-value=5.2e-65 Score=437.87 Aligned_cols=191 Identities=29% Similarity=0.385 Sum_probs=176.4
Q ss_pred CCCeEEEecCCHHHHHHHHhcCCceE-EEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEc
Q 027128 30 TPVKIILGSSSMPRRKILAEMGYEFS-VMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (228)
Q Consensus 30 ~~~~iILAS~SprR~~lL~~~gi~f~-v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~a 108 (228)
.+++|||||+||||++||+++|++|. ++|++|||+.++..+|.+||.++|++||++|++++..+.. .++.+||||
T Consensus 3 ~~~~iILAS~SprR~elL~~~Gi~f~~v~~~~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~----~~~~~vI~a 78 (207)
T PRK01441 3 GRPKLVLASGSPRRVELLNQAGIEPDRLMPADIDETPKRAEHPRSLARRLSREKAEAALEALQGDDD----WRGAYILAA 78 (207)
T ss_pred CCCcEEEeCCCHHHHHHHHhcCCCCeEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccccc----CCCcEEEec
Confidence 35689999999999999999999875 7899999999888899999999999999999987643110 145899999
Q ss_pred ceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccce
Q 027128 109 DTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVA 188 (228)
Q Consensus 109 DTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kA 188 (228)
||||++||+|+|||.|.+||++||++|||++|+|+|||||+. .+++.+.++++|+|+|+++|+++|++||++++|+|||
T Consensus 79 DTvV~~~g~il~KP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~-~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~e~~dkA 157 (207)
T PRK01441 79 DTVVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTGVCLVT-PDGKLRQKLVETRVRFKRLSREDIEAYLASGEWRGKA 157 (207)
T ss_pred CEEEEECCEEcCCCCCHHHHHHHHHHHCCCceEEEEEEEEEE-CCceEEEEEEEEEEEECCCCHHHHHHHHhcCCCcccc
Confidence 999999999999999999999999999999999999999985 4566778999999999999999999999999999999
Q ss_pred eeeeecccCcccceeeeecccCCcccCCHHHHHHHHHH
Q 027128 189 GGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 226 (228)
Q Consensus 189 G~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~ 226 (228)
|||+||| .|+.||++|+|||+||||||+..++++|.+
T Consensus 158 Ggy~Iqg-~g~~~i~~I~G~y~nVvGLPl~~l~~~L~~ 194 (207)
T PRK01441 158 GGYAIQG-IAGSFVVKLVGSYTNVVGLPLYETVSLLAG 194 (207)
T ss_pred ccEEecc-ChhheEEEEECCccceeCCCHHHHHHHHHH
Confidence 9999999 899999999999999999999999999976
No 22
>PRK14363 Maf-like protein; Provisional
Probab=100.00 E-value=9.2e-65 Score=435.24 Aligned_cols=182 Identities=30% Similarity=0.463 Sum_probs=171.8
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceE
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTV 111 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTv 111 (228)
++|||||+||||++||+++|++|++++++|||+.. .+|.+||.++|.+||++|++++.. ++.+|||||||
T Consensus 1 ~~iILAS~SprR~elL~~~G~~f~v~~~~iDE~~~--~~P~~~v~~lA~~KA~~v~~~~~~--------~~~lvI~aDTV 70 (204)
T PRK14363 1 MRIILASSSPRRRQLMELLGIEFEVEKPDVEEEFL--ESPEETVRELSLRKAEWVFKKRKE--------EEILVIGSDTV 70 (204)
T ss_pred CcEEEeCCCHHHHHHHHhCCCCeEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHhccC--------CCCEEEEeCeE
Confidence 57999999999999999999999999999999874 689999999999999999887531 35799999999
Q ss_pred EEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeee
Q 027128 112 VVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGL 191 (228)
Q Consensus 112 V~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y 191 (228)
|++||+|+|||.|.+||++||++|||++|+|+|||||+. ++..++++++|+|+|++|++++|++||++++|+||||||
T Consensus 71 V~~~g~IlgKP~~~eeA~~~L~~lsG~~H~V~T~v~l~~--~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~ep~dkAG~y 148 (204)
T PRK14363 71 VVLDGNILGKPESLEEAKGMLKKLSGRWHVVYTGVAFVS--SETKDVIVSSTKVRFRELPESVIDYYVEKYRPLDKAGAY 148 (204)
T ss_pred EEECCEEcCCCCCHHHHHHHHHHHCCCCcEEEEEEEEEE--CCeEEEEEEEEEEEECCCCHHHHHHHHhcCCChhhcceE
Confidence 999999999999999999999999999999999999985 456688999999999999999999999999999999999
Q ss_pred eecccCcccceeeeecccCCcccCCHHHHHHHHHH
Q 027128 192 IIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 226 (228)
Q Consensus 192 ~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~ 226 (228)
+||| .|+.||++|+|||+||||||+..++++|++
T Consensus 149 ~Iqg-~g~~~i~~I~G~~~nV~GLPl~~l~~~L~~ 182 (204)
T PRK14363 149 GIQD-FAAVFVEKIEGDFFTVVGFPLGMVWQYLYE 182 (204)
T ss_pred EEcc-CccceEEeeECCCCceeCCCHHHHHHHHHH
Confidence 9999 899999999999999999999999999986
No 23
>cd00555 Maf Nucleotide binding protein Maf. Maf has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea, but homologs in B.subtilis and S.cerevisiae are nonessential for cell division. Maf has been predicted to be a nucleotide- or nucleic acid-binding protein with structural similarity to the hypoxanthine/xanthine NTP pyrophosphatase Ham1 from Methanococcus jannaschii, RNase H from Escherichia coli, and some other nucleotide or RNA-binding proteins.
Probab=100.00 E-value=1.3e-64 Score=427.03 Aligned_cols=180 Identities=37% Similarity=0.562 Sum_probs=171.6
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEEE
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVVV 113 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~ 113 (228)
|||||+||||++||+++|++|++++++|||+.++..+|.+||.++|.+||++|+++++ ++.+||||||||+
T Consensus 1 iILaS~SprR~elL~~~g~~f~~~~~~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~---------~~~liI~aDtvv~ 71 (180)
T cd00555 1 LILASASPRRRELLEQLGIPFEVVPSDIDETPIKGESPEDYVLRLAEAKAEAVAARLP---------PDALVIGADTVVV 71 (180)
T ss_pred CEECCCCHHHHHHHHhCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCC---------CCCEEEEecEEEE
Confidence 6999999999999999999999999999999998899999999999999999998864 1579999999999
Q ss_pred ECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceeeeee
Q 027128 114 YEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLII 193 (228)
Q Consensus 114 ~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~Y~I 193 (228)
+||+|+|||.|.+||++||++|||++|+|+|||||++.. +..+.++++|+|+|+++++++|++||++++|+||||||+|
T Consensus 72 ~~g~il~KP~~~~eA~~~L~~lsg~~h~v~T~v~l~~~~-~~~~~~~~~t~v~f~~l~~~~I~~Yi~~~~~~~kAGgy~i 150 (180)
T cd00555 72 LDGRILGKPKDREEAREMLKRLSGRTHEVYTGVALIDPG-GKLVTDVESTKVRFRELSDEEIEAYVASGEPLDKAGAYGI 150 (180)
T ss_pred ECCEEEcCCCCHHHHHHHHHHHcCCCcEEEEEEEEEECC-cEEEEEEEEEEEEECCCCHHHHHHHHhcCCccceeeEEEe
Confidence 999999999999999999999999999999999998754 6778999999999999999999999999999999999999
Q ss_pred cccCcccceeeeecccCCcccCCHHHHHHHH
Q 027128 194 EHSLILPYVKQVVGAMDSVMGLPKAVTEKLI 224 (228)
Q Consensus 194 qg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L 224 (228)
|| .|..||++|+|||+||||||+..++++|
T Consensus 151 qg-~g~~~i~~I~G~~~nV~GLPl~~l~~~L 180 (180)
T cd00555 151 QG-LGGALIERIEGDYSNVVGLPLPELLKLL 180 (180)
T ss_pred cc-ChhhcEEeeECCcccccCCCHHHHHhhC
Confidence 99 7999999999999999999999998875
No 24
>PRK02478 Maf-like protein; Reviewed
Probab=100.00 E-value=2.1e-64 Score=431.76 Aligned_cols=184 Identities=27% Similarity=0.390 Sum_probs=171.3
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCC------CCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEE
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIR------KEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTIL 105 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~------~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~v 105 (228)
++|||||+||||++||+++|++|++++++|||+.+. +.+|.++|.++|++||++|+++++ +.+|
T Consensus 3 ~~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~----------~~iv 72 (199)
T PRK02478 3 VKLILASKSPFRRALLENAGLEFSAAAADIDERAVEAPLEESGATPEDVALVLAEAKAIDVSERFP----------GALV 72 (199)
T ss_pred CcEEEeCCCHHHHHHHHHCCCCeEEecCCCCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHCC----------CCEE
Confidence 479999999999999999999999999999998764 367999999999999999988754 4799
Q ss_pred EEcceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHc--CC
Q 027128 106 IVADTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEE--GI 183 (228)
Q Consensus 106 I~aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~t--ge 183 (228)
|||||||++||+|+|||.|.+||++||++|||++|+|+|||||+. .+...+.++++|+|+|+++++++|++||++ ++
T Consensus 73 I~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~T~v~l~~-~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~g~e 151 (199)
T PRK02478 73 IGCDQTMSLGDEVFHKPKDMEEARRHLQKLSGKTHQLNSAVVLVR-DGKVLWRHVSIAHMTMRDLDAGFIGRHLARVGEK 151 (199)
T ss_pred EEeCeEEEECCEEecCCCCHHHHHHHHHHhcCCCcEEEEEEEEEE-CCcEEEEEEEeEEEEECCCCHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999985 333467889999999999999999999998 59
Q ss_pred CccceeeeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 184 VLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 184 ~~~kAG~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|+||||||+||| .|..||++|+|||+||||||+..+.++|.+.
T Consensus 152 ~~dkAG~y~Iqg-~g~~li~~I~Gdy~nVvGLPl~~l~~~L~~~ 194 (199)
T PRK02478 152 ALSSVGAYQLEG-EGIQLFEKIEGDYFTILGLPLLPLLAKLREL 194 (199)
T ss_pred ccccceeEEecC-CceeeEEEeECCccceeCCCHHHHHHHHHHc
Confidence 999999999999 7999999999999999999999999999864
No 25
>PRK01839 Maf-like protein; Reviewed
Probab=100.00 E-value=2.1e-64 Score=434.65 Aligned_cols=190 Identities=25% Similarity=0.401 Sum_probs=173.8
Q ss_pred CCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCC------CCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceE
Q 027128 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKS------IRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTI 104 (228)
Q Consensus 31 ~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~------~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~ 104 (228)
..+|||||+||||++||+++|++|++++++|||+. ..+.+|.+||.++|++||++|++++.... .++.+
T Consensus 9 ~~~lILAS~SprR~elL~~~gi~f~v~~~~idE~~~~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~l~~~~-----~~~~l 83 (209)
T PRK01839 9 FPFLYLASQSPRRQELLQQLGVRFELLLPRPDEDAEALEAELPGEAPDDYVQRVCVAKAEAARARLVARG-----LPAAP 83 (209)
T ss_pred CCCEEEeCCCHHHHHHHHHCCCCeEEeCCCCCcCccccccCCCCCCHHHHHHHHHHHHHHHHHHhhcccc-----CCCCE
Confidence 35799999999999999999999999999999974 34578999999999999999998864211 13579
Q ss_pred EEEcceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeE-EEEEEEEEEEEcCCCHHHHHHHHHcCC
Q 027128 105 LIVADTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFR-KGEWDRVEIQFHEIPDEVIEKLIEEGI 183 (228)
Q Consensus 105 vI~aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~-~~~~~~t~V~F~~ls~~~I~~Yl~tge 183 (228)
||||||||++||+|+|||.|.+||++||++|||++|+|+|||||++. +++. ++++++|+|+|+++++++|++||++|+
T Consensus 84 vI~aDTvV~~~g~IlgKP~~~eeA~~~L~~lsg~~h~V~T~v~l~~~-~~~~~~~~~~~T~V~F~~l~~~~I~~Yi~~~e 162 (209)
T PRK01839 84 VLVADTTVTIDGAILGKPADAADALAMLTRLAGRTHRVLTAVAVIDA-DGELMPPALSRSRVRFAPATRDAIARYVASGE 162 (209)
T ss_pred EEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEEC-CCeEEEEEEEEEEEEECCCCHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999864 3444 589999999999999999999999999
Q ss_pred CccceeeeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 184 VLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 184 ~~~kAG~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|+||||||+||| .|+.||++|+|||+||||||+..+.++|.+.
T Consensus 163 ~~dkAGgy~Iqg-~g~~~i~~I~G~y~nV~GLPl~~l~~~L~~~ 205 (209)
T PRK01839 163 PFGKAGAYAIQG-RAAEFVERIDGSYSGIMGLPLFETAALLRAA 205 (209)
T ss_pred ChhhccEEEEcc-ChhheEEeeECCccceeCCCHHHHHHHHHHc
Confidence 999999999999 7999999999999999999999999999864
No 26
>PF02545 Maf: Maf-like protein; InterPro: IPR003697 Maf is a putative inhibitor of septum formation in eukaryotes, bacteria, and archaea. The Maf protein shares substantial amino acid sequence identity with the Escherichia coli OrfE protein [].; GO: 0005737 cytoplasm; PDB: 2P5X_A 1EXC_B 1EX2_A.
Probab=100.00 E-value=5.6e-65 Score=434.14 Aligned_cols=187 Identities=40% Similarity=0.558 Sum_probs=147.7
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcce
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKE-KPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~-~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDT 110 (228)
|+|||||+||||++||+++|++|++++++|||+...+. +|.++|.++|.+||+++++++.. +..+||||||
T Consensus 1 M~iILaS~SprR~elL~~~g~~f~v~~~~~dE~~~~~~~~p~~~v~~lA~~Ka~~~~~~~~~--------~~~~vi~aDT 72 (195)
T PF02545_consen 1 MRIILASSSPRRRELLKQLGINFEVIPSDIDEDAIRKESDPEEYVQRLAEAKAEAVVSKLYP--------DSAIVIGADT 72 (195)
T ss_dssp --EEE----HHHHHHHHCTT--EEE---------GCCSSSHHHHHHHHHHHHHHHHHHCCHC--------CHSEEEEEEE
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcc--------cceEEEEEee
Confidence 58999999999999999999999999999999997655 69999999999999997777542 1279999999
Q ss_pred EEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEEcCCCHHHHHHHHHcCCCccceee
Q 027128 111 VVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGG 190 (228)
Q Consensus 111 vV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~~~kAG~ 190 (228)
||++||+|+|||.|.+||++||++|||++|+|+|||||++...+....++++|+|+|+++++++|++||++|+|+|||||
T Consensus 73 vv~~~g~Il~KP~~~eeA~~~L~~lsg~~h~V~T~v~l~~~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~~ge~~~kAG~ 152 (195)
T PF02545_consen 73 VVVCDGEILGKPKDEEEAREMLKSLSGKTHQVYTGVCLINPDKGQIFYFVEVTKVKFRPLSDEEIEAYVESGEPLDKAGG 152 (195)
T ss_dssp EEECTTEEE-S-SSHHHHHHHHHHHTTSEEEEEEEEEEEECCECCCCEEEEEEEEEE----HHHHHHHHCCTCCCCSCCC
T ss_pred eeeeeeEEEeCCCCHHHHHHHHHhhCCCcEEEEEEEEEEECCCceEEeecCcEEEEEcCCCHHHHHHHHhhccCceeeEE
Confidence 99999999999999999999999999999999999999988777667788999999999999999999999999999999
Q ss_pred eeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 191 LIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 191 Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
|+||| .|+.||++|+|||+||||||+..++++|.++
T Consensus 153 y~iqg-~g~~li~~I~G~~~nVvGLPl~~l~~~L~~~ 188 (195)
T PF02545_consen 153 YGIQG-LGGQLIERIEGDYSNVVGLPLEELCKLLREL 188 (195)
T ss_dssp --SSC-GGGGTEEEEEC-HHHHHT--HHHHHHHHCCH
T ss_pred EeeCC-cceeeEEEEECCCCceECCCHHHHHHHHHHC
Confidence 99999 7999999999999999999999999999753
No 27
>KOG1509 consensus Predicted nucleic acid-binding protein ASMTL [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-55 Score=366.49 Aligned_cols=193 Identities=37% Similarity=0.575 Sum_probs=180.3
Q ss_pred CCCeEEEecCCHHHHHHHHhcCCceEEEcCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEE
Q 027128 30 TPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRK--EKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (228)
Q Consensus 30 ~~~~iILAS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~--~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~ 107 (228)
..++|||||+||||++|++.+|+++++++|+|+|++++. .+|.+|+..+|.+||.+|.+++...+. ..+.++|+
T Consensus 8 ~~~riiL~S~s~rrk~i~~~~G~~~~~~~S~feEnl~k~~~~~p~~yv~~tA~~KA~~I~erL~~~Ed----~~~~~vi~ 83 (209)
T KOG1509|consen 8 KGKRIILASASPRRKQILAEMGLNLEVVVSTFEENLIKSSFETPEDYVVETAKQKAEEIIERLGDGED----SFPDVVIS 83 (209)
T ss_pred cCcEEEEecCCchHHHHHHHcCCceEEEeccchhhchhhccCCHHHHHHHHHHHHHHHHHHHhhcccc----CCcccccc
Confidence 568999999999999999999999999999999999987 899999999999999999999985332 23689999
Q ss_pred cceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCC--C-eEEEEEEEEEEEEcCCCHHHHHHHHHcCCC
Q 027128 108 ADTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKT--G-FRKGEWDRVEIQFHEIPDEVIEKLIEEGIV 184 (228)
Q Consensus 108 aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~--~-~~~~~~~~t~V~F~~ls~~~I~~Yl~tge~ 184 (228)
||||+..+++|+|||.|.++|.+||++|||+.|.|+|||+|..... | +...|+++|+|+|.+++++.|+.||++|+|
T Consensus 84 adtI~~~~~~Iyekp~d~~~a~~~l~rl~~~~~~v~t~v~l~~~~~~~g~~~~~~~d~t~VyF~eIpee~ie~yV~sG~~ 163 (209)
T KOG1509|consen 84 ADTITTDGGEIYEKPVDKKDAKRMLKRLSGRPHSVFTGVALIHCSSQLGTRVSEFYDETKVYFGEIPEEVIEEYVDSGEP 163 (209)
T ss_pred ccEEEEeccEEecCCCChhHHHHHHHHhcCCCcceeeeEEEEEecccCCceeecceeeeEEEeccCCHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999999999987653 4 345799999999999999999999999999
Q ss_pred ccceeeeeecccCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 027128 185 LNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 227 (228)
Q Consensus 185 ~~kAG~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~~l~~~L~~~ 227 (228)
++|||||+||| +|+.||++|+|||+||||||+++++++|.+.
T Consensus 164 lkkAGgy~Iq~-~ga~lI~~I~Gd~~nVvGLPl~~t~K~l~~~ 205 (209)
T KOG1509|consen 164 LKKAGGYGIQG-LGAPLIESVVGDFDNVVGLPLELTEKLLNKV 205 (209)
T ss_pred hhhccceeccc-ccchheeeeccCccccccCcHHHHHHHHHHH
Confidence 99999999999 8999999999999999999999999999875
No 28
>cd00985 Maf_Ham1 Maf_Ham1. Maf, a nucleotide binding protein, has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides, such as hypoxanthine/xanthine NTP, but not standard nucleotides.
Probab=99.97 E-value=3.8e-30 Score=205.00 Aligned_cols=122 Identities=32% Similarity=0.405 Sum_probs=114.3
Q ss_pred EEEecCCHHHHHHHHhcC-CceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEE
Q 027128 34 IILGSSSMPRRKILAEMG-YEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVV 112 (228)
Q Consensus 34 iILAS~SprR~~lL~~~g-i~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV 112 (228)
|||||+||+|+++|+++| ++|.++++++||+..... |.+++.++|..||+++++.++ +.+||+|||+|
T Consensus 1 iiLaS~s~~R~~~l~~~~~~~~~~~~~~i~E~~~~~~-~~~~~~~~A~~Ka~~~~~~~~----------~~~vI~~Dt~v 69 (131)
T cd00985 1 LILASGSPRRLEELKQIGGIEFEVLPSDIDETGLKGE-PEDTVEELALLKARAVAERLP----------DAPVIADDTGL 69 (131)
T ss_pred CEEecCChHHHHHHHhcCCCCEEEeCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHCC----------CCEEEECCcEE
Confidence 699999999999999999 999999999999988777 999999999999999988764 36999999999
Q ss_pred EECCEEecCCCCHHHHHHHHHHccCCcEEEEEeEEEEECCCCeEEEEEEEEEEEE
Q 027128 113 VYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQF 167 (228)
Q Consensus 113 ~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~t~V~F 167 (228)
++||++++||.+.++|.+||+.|+|++|.|+|++|+++. .+..+.++.+|+++|
T Consensus 70 ~~~g~~~~kp~~~~~a~~~l~~~~~r~~~~~t~v~l~~~-~~~~~~~~~~t~~~~ 123 (131)
T cd00985 70 VVDGRPGGKPARFAEALEMLRGLSGRTAEFVTAVALVDP-DGKIITFEGETEGKI 123 (131)
T ss_pred EECCEeCcCCCCHHHHHHHHhhcCCCEEEEEEEEEEEEC-CCcEEEEEEEEEEEE
Confidence 999999999999999999999999999999999999974 347788999999999
No 29
>cd00515 HAM1 NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides such as XTP to XMP and ITP to IMP, but not the standard nucleotides, in the presence of Mg or Mn ions. The enzyme exists as a homodimer. The HAM1 protein may be acting as an NTPase by hydrolyzing the HAP triphosphate.
Probab=95.56 E-value=0.61 Score=39.51 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=65.0
Q ss_pred EEEecCCHHHHH----HHHhcCCceEEEc--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEE
Q 027128 34 IILGSSSMPRRK----ILAEMGYEFSVMA--ADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (228)
Q Consensus 34 iILAS~SprR~~----lL~~~gi~f~v~~--s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~ 107 (228)
|++||+.+.-.+ ||..++++..... .+++|..- --.++|..||+.+++.+. .+||+
T Consensus 1 i~~aT~N~~K~~E~~~il~~~~i~v~~~~~~~~~~E~~~-------s~~enA~~KA~~a~~~~~-----------~pvia 62 (183)
T cd00515 1 IVFATGNKGKLKEFKEILAPFGIEVVSLKDIIDIEETGS-------TFEENALLKARAAAEALG-----------LPVLA 62 (183)
T ss_pred CEEECCCHHHHHHHHHHHhhcCcEEEEcCcCCCCCCCCC-------CHHHHHHHHHHHHHHHHC-----------CCEEE
Confidence 467777776543 4444455543333 34555431 356788999999988763 47999
Q ss_pred cceEEEEC---C-------EEecCCCCHHHHHHHHHHccC---CcEEEEEeEEEEEC
Q 027128 108 ADTVVVYE---G-------VIREKPSSREEARRFIKDYSG---GQCATVSSVLVTNL 151 (228)
Q Consensus 108 aDTvV~~d---g-------~IlgKP~d~eeA~~~L~~lsG---~~h~v~T~v~l~~~ 151 (228)
=||=+.++ | +..+.-.+.+....+|..|++ ++....+.+|++..
T Consensus 63 dDsGL~i~aL~g~PG~ys~r~~~~~~~~~~~~~ll~~l~~~~~r~A~~~~~i~~~~~ 119 (183)
T cd00515 63 DDSGLCVDALNGFPGVYSARFAGEHDDAENNEKLLELLEGDEDRSAYFVCVIALVDP 119 (183)
T ss_pred eccEEEEeccCCCCchhhhhhcCCCCHHHHHHHHHHHccCCCCCeEEEEEEEEEEeC
Confidence 99988764 3 223211245677888888875 77888888888753
No 30
>PRK14824 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=95.34 E-value=0.96 Score=39.06 Aligned_cols=99 Identities=18% Similarity=0.301 Sum_probs=64.9
Q ss_pred eEEEecCCHHHHH----HHHhcCCceEEEcC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceE
Q 027128 33 KIILGSSSMPRRK----ILAEMGYEFSVMAA----DIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTI 104 (228)
Q Consensus 33 ~iILAS~SprR~~----lL~~~gi~f~v~~s----~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~ 104 (228)
+|++||+-+.-.+ ||..+|+ ++++. +++|.. .--.++|..||+.+++.+. .+
T Consensus 2 ~i~~aT~N~~K~~E~~~iL~~~~i--~v~~~~~~~e~~E~~-------~tf~eNA~~KA~~~~~~~~-----------~p 61 (201)
T PRK14824 2 KILLATTNEGKVREIKRLLSDLGI--EVLSPDKKIEVEEDG-------ETFLENAYLKARAYAEFYK-----------IP 61 (201)
T ss_pred EEEEECCChHHHHHHHHHHhhcCC--EEEEcCcCCCCCCCC-------CCHHHHHHHHHHHHHHHHC-----------CC
Confidence 7999999987654 4444454 44433 333322 2356789999999988753 36
Q ss_pred EEEcceEEEEC---CE-------Ee-----cC-----CCCHHHHHHHHHHccC---CcEEEEEeEEEEEC
Q 027128 105 LIVADTVVVYE---GV-------IR-----EK-----PSSREEARRFIKDYSG---GQCATVSSVLVTNL 151 (228)
Q Consensus 105 vI~aDTvV~~d---g~-------Il-----gK-----P~d~eeA~~~L~~lsG---~~h~v~T~v~l~~~ 151 (228)
+|+=||=+.+| |. .. |. ..|.+....+|..|.+ |....++++|++..
T Consensus 62 viaDDSGL~vdAL~G~PGvysar~~~~~~~g~~~~~~~~d~~~~~~ll~~l~~~~~R~A~f~c~ia~~~~ 131 (201)
T PRK14824 62 VLADDSGLEVPALEGYPGVYSSRFYQIEFGGKEEVVESKDEANIRKLLRLLEGKQNRKARFVAFVVLYFG 131 (201)
T ss_pred EEEeccEEEecccCCCCceeeHHHhhhcccCccccccCCHHHHHHHHHHHccCCCCCcEEEEEEEEEEEC
Confidence 89999977654 42 22 21 2355667778888876 67788888888753
No 31
>PRK00120 dITP/XTP pyrophosphatase; Reviewed
Probab=94.72 E-value=2 Score=36.83 Aligned_cols=110 Identities=15% Similarity=0.201 Sum_probs=68.0
Q ss_pred CeEEEecCCHHHHH----HHHhcCCceEEEcC-CC--CCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceE
Q 027128 32 VKIILGSSSMPRRK----ILAEMGYEFSVMAA-DI--DEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTI 104 (228)
Q Consensus 32 ~~iILAS~SprR~~----lL~~~gi~f~v~~s-~i--DE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~ 104 (228)
++|++||+-+.-.+ ||..+|+ ++.+. ++ +|-.-... --.++|..||+.+++.+. .+
T Consensus 1 m~i~~aT~N~~K~~E~~~il~~~~~--~i~~~~~~~~~e~~E~~~----s~~enA~~KA~~~~~~~~-----------~p 63 (196)
T PRK00120 1 MKIVLASHNAGKLRELKALLAPFGI--EVVSQGELGVPEPEETGT----TFVENALIKARHAAKATG-----------LP 63 (196)
T ss_pred CEEEEEcCCHHHHHHHHHHHhhcCC--EEEehhhcCCCCCCCCCC----CHHHHHHHHHHHHHHHHC-----------CC
Confidence 47999999987654 5554554 33332 22 22111112 245788999999988763 37
Q ss_pred EEEcceEEEEC---C-------EEecC-CCCHHHHHHHHHHccC-----CcEEEEEeEEEEECCCCeEEEE
Q 027128 105 LIVADTVVVYE---G-------VIREK-PSSREEARRFIKDYSG-----GQCATVSSVLVTNLKTGFRKGE 159 (228)
Q Consensus 105 vI~aDTvV~~d---g-------~IlgK-P~d~eeA~~~L~~lsG-----~~h~v~T~v~l~~~~~~~~~~~ 159 (228)
||+=||=+.++ | +..|. ..+.+....+|+.|.+ ++....+++|++.. .+....+
T Consensus 64 viaDDSGL~i~aL~g~PGvysar~~g~~~~~~~~~~~ll~~l~~~~~~~R~A~~~~~i~~~~~-~~~~~~f 133 (196)
T PRK00120 64 ALADDSGLCVDALGGAPGVYSARYAGEGASDAANNEKLLEELKGVPDEDRRARFVCVLVLVRP-DPTPLVA 133 (196)
T ss_pred EEEEcCEEEEcccCCCCchhhHHHhCcCCCHHHHHHHHHHHhhCCCCCCCcEEEEEEEEEEEC-CCCEEEE
Confidence 99999987765 3 23342 1255566777887765 56788888888754 3444443
No 32
>PRK14822 nucleoside-triphosphatase; Provisional
Probab=94.29 E-value=2 Score=36.98 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=64.1
Q ss_pred eEEEecCCHHHHHHHH----hcCCceEEEc-CCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEE
Q 027128 33 KIILGSSSMPRRKILA----EMGYEFSVMA-ADIDEK-SIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILI 106 (228)
Q Consensus 33 ~iILAS~SprR~~lL~----~~gi~f~v~~-s~iDE~-~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI 106 (228)
+|++||+-+.-.+=++ .+++ ++++ .+++.. .++ + -..--.++|..||+.+++.+. .++|
T Consensus 3 ~i~~aT~N~~K~~E~~~iL~~~~~--~i~~~~~~~~~~e~~-E-~g~t~~enA~~KA~~~~~~~~-----------~pvi 67 (200)
T PRK14822 3 EIVIATKNKGKVREFKEIFEKFDI--EVKSLADFPPIPEVE-E-TGTTFEENAILKAEAAAKALN-----------KPVI 67 (200)
T ss_pred eEEEECCCHHHHHHHHHHHhhcCc--EEEEchhcCCCCCCC-C-CCCCHHHHHHHHHHHHHHHHC-----------CCEE
Confidence 6999999988754443 3454 4433 222110 011 0 011356789999999988763 3699
Q ss_pred EcceEEEEC---C-------EEecC-CCCHHHHHHHHHHccC-----CcEEEEEeEEEEE
Q 027128 107 VADTVVVYE---G-------VIREK-PSSREEARRFIKDYSG-----GQCATVSSVLVTN 150 (228)
Q Consensus 107 ~aDTvV~~d---g-------~IlgK-P~d~eeA~~~L~~lsG-----~~h~v~T~v~l~~ 150 (228)
+=||=+.+| | +..|. ..|.+....+|..|.| +.....+++|++.
T Consensus 68 aDDSGL~v~AL~G~PGvysar~~g~~~~d~~~~~~ll~~l~~~~~~~R~A~f~~~ia~~~ 127 (200)
T PRK14822 68 ADDSGLEVDALNGAPGVYSARYAGEAKDDAANNEKLLKELGGVPFEKRTARFHCVIAVAF 127 (200)
T ss_pred EeccEEEEcccCCCCceechhhcCCCCCHHHHHHHHHHHhhCCCCCCCcEEEEEEEEEEe
Confidence 999977654 4 33332 1356677778888876 4677788888874
No 33
>PF01725 Ham1p_like: Ham1 family; InterPro: IPR002637 This family contains the Saccharomyces cerevisiae (Baker's yeast) HAM1 protein P47119 from SWISSPROT and other hypothetical archaeal, bacterial and Caenorhabditis elegans proteins. S. cerevisiae HAM1 protects against the mutagenic effects of the base analog 6-N-hydroxylaminopurine (HAP) which can be a natural product of monooxygenase activity on adenine. HAM1 protein protects the cell from HAP, either on the level of deoxynucleoside triphosphate or the DNA level by a yet unidentified set of reactions [].; GO: 0016787 hydrolase activity; PDB: 3TQU_A 1VP2_B 3S86_D 1B78_A 2MJP_B 2Q16_A 2PYU_A 1K7K_A 2ZTI_A 2DVP_A ....
Probab=93.88 E-value=0.79 Score=38.94 Aligned_cols=113 Identities=19% Similarity=0.172 Sum_probs=66.3
Q ss_pred EEEecCCHHHHHHHHh----cCCce------EEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcce
Q 027128 34 IILGSSSMPRRKILAE----MGYEF------SVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQT 103 (228)
Q Consensus 34 iILAS~SprR~~lL~~----~gi~f------~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~ 103 (228)
|++||+-+...+=++. +|++. .....+++|. .+-..++|..||+.+++.+. .
T Consensus 1 i~~aT~N~~K~~E~~~~l~~~~i~v~~~~~~~~~~~~~~E~-------~~t~~enA~~KA~~~~~~~~-----------~ 62 (189)
T PF01725_consen 1 IIFATGNKGKIREIQELLKPLGIEVISLIDLPEPDPEPEET-------GETFEENALIKAKAAAQQLG-----------K 62 (189)
T ss_dssp EEEE-S-HHHHHHHHHHCTTTTEEEEECEEECEE------B-------SSSHHHHHHHHHHHHHHHHS-----------S
T ss_pred CEEEcCCHHHHHHHHHHHhhcCCcEEeHHHcCccCcCCCcC-------CCCHHHHHHHHHHHHHHHhC-----------C
Confidence 6788888876554444 44322 1122345553 22345678899999998864 3
Q ss_pred EEEEcceEEEEC---CE--EecCCC------CHHHHHHHHHHccCC---cEEEEEeEEEEECCCCeEEEEEEEEEE
Q 027128 104 ILIVADTVVVYE---GV--IREKPS------SREEARRFIKDYSGG---QCATVSSVLVTNLKTGFRKGEWDRVEI 165 (228)
Q Consensus 104 ~vI~aDTvV~~d---g~--IlgKP~------d~eeA~~~L~~lsG~---~h~v~T~v~l~~~~~~~~~~~~~~t~V 165 (228)
+||+-||=+.++ |. ++-|-. +.+.....|+.+++. +....+++|+++. ++....|.-++.=
T Consensus 63 pvi~dDSGL~v~aL~g~PG~~s~r~~g~~~~~~~~~~~ll~~l~~~~~R~A~~~~~ia~~~~-~~~~~~f~G~~~G 137 (189)
T PF01725_consen 63 PVIADDSGLEVDALNGFPGVYSARFAGPEATDEEGNEKLLKLLSGLEDRRAYFRCVIALADP-DGEIKVFEGEVEG 137 (189)
T ss_dssp SEEEEEEEEEEGGGTTTBGGGHCCCC-TTS-HHHHHHHHHHHTTTSSG-EEEEEEEEEEEET-TTTEEEEEEEEEE
T ss_pred CEEEeCcEEeHhhhCCCcCCceEEEecCCCCHHHHHHHHHHHhcCCCCCeEEEEEEEEEEEC-CCCEEEEEEEEEE
Confidence 599999988875 41 333333 466677778888764 5777888888874 4445555444433
No 34
>PRK14821 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=93.58 E-value=1.9 Score=36.61 Aligned_cols=100 Identities=19% Similarity=0.184 Sum_probs=63.0
Q ss_pred CeEEEecCCHHHHH----HHHhcCCceEEEcCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEE
Q 027128 32 VKIILGSSSMPRRK----ILAEMGYEFSVMAAD--IDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTIL 105 (228)
Q Consensus 32 ~~iILAS~SprR~~----lL~~~gi~f~v~~s~--iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~v 105 (228)
|+|++||+-+.-.+ ||..+|+ ++.+.. +.|. .. .--.++|..||+.+++.+. .++
T Consensus 1 m~i~~aT~N~~K~~E~~~il~~~~i--~v~~~~~~~~E~--~~----~t~~enA~~KA~~~~~~~~-----------~pv 61 (184)
T PRK14821 1 MKIYFATGNKGKVEEAKIILKPLGI--EVEQIKIEYPEI--QA----DTLEEVAAFGAKWVYNKLN-----------RPV 61 (184)
T ss_pred CEEEEECCChhHHHHHHHHHhhcCc--EEEECCCCCCCC--CC----CCHHHHHHHHHHHHHHHHC-----------CCE
Confidence 37999999987754 4544554 444433 2221 11 2356789999999988753 468
Q ss_pred EEcceEEEE---CCE--EecCCC-CHHHHHHHHHHccC---CcEEEEEeEEEEE
Q 027128 106 IVADTVVVY---EGV--IREKPS-SREEARRFIKDYSG---GQCATVSSVLVTN 150 (228)
Q Consensus 106 I~aDTvV~~---dg~--IlgKP~-d~eeA~~~L~~lsG---~~h~v~T~v~l~~ 150 (228)
|+=||=+.+ +|. ++-|-. +......+|..|.| +.....+++|++.
T Consensus 62 laDDSGL~v~aL~g~PGvysa~~~~~~~~~~ll~~l~~~~~R~A~f~~~ia~~~ 115 (184)
T PRK14821 62 IVEDSGLFIEALNGFPGPYSAFVYKTLGNEGILKLLEGEENRRAYFKSVIGYCD 115 (184)
T ss_pred EEEcCEEeehhhCCCCcHHHHHHHHHHHHHHHHHHccCCCCCeEEEEEEEEEEE
Confidence 999996654 442 222211 44556667888876 6777778888775
No 35
>TIGR00042 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family. Saccharomyces cerevisiae HAM1 protects against the mutagenic effects of the base analog 6-N-hydroxylaminopurine, which can be a natural product of monooxygenase activity on adenine. Methanococcus jannaschii MJ0226 and E. coli RdgB are also characterized as pyrophosphatases active against non-standard purines NTPs. E. coli RdgB appears to act by intercepting non-canonical deoxyribonucleotide triphosphates from replication precursor pools.
Probab=93.58 E-value=4.1 Score=34.58 Aligned_cols=102 Identities=19% Similarity=0.192 Sum_probs=63.5
Q ss_pred eEEEecCCHHHHH----HHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEc
Q 027128 33 KIILGSSSMPRRK----ILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (228)
Q Consensus 33 ~iILAS~SprR~~----lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~a 108 (228)
+|++||+.+.-.+ ||..+|+. .+...+++|-...+.+ -.++|..||+.+++.+. .++|+=
T Consensus 1 ~i~~aT~N~~K~~E~~~il~~~~~~-~~~~~~~~~~ee~g~t----~~enA~~KA~~~~~~~~-----------~pvlaD 64 (184)
T TIGR00042 1 KIVFATGNPGKLKEVQSILSDLGDN-EIEQLDLGYPEETGLT----FEENALLKAKHAAKILN-----------KPVIAE 64 (184)
T ss_pred CEEEECCCHHHHHHHHHHHhhcCCE-EEecccCCCCCCCCCC----HHHHHHHHHHHHHHHhC-----------CCeEEc
Confidence 4789999887654 44444542 2233444432222223 45678899999988753 468999
Q ss_pred ceEEEE---CCE--EecCC---CCHHHHHHHHHHccC---CcEEEEEeEEEEE
Q 027128 109 DTVVVY---EGV--IREKP---SSREEARRFIKDYSG---GQCATVSSVLVTN 150 (228)
Q Consensus 109 DTvV~~---dg~--IlgKP---~d~eeA~~~L~~lsG---~~h~v~T~v~l~~ 150 (228)
||=+.+ +|. ++-|. .|.+.-..+|..|.+ ++....+++|+..
T Consensus 65 DSGL~v~AL~G~PGvysar~~~~d~~~~~~ll~~l~~~~~R~A~f~~~l~~~~ 117 (184)
T TIGR00042 65 DSGLFVDALNGFPGIYSARYQGTDIGNLEKILKLLEGVENRQAYFVCVIGYCD 117 (184)
T ss_pred ccEEEEhhcCCCcchhhHHHhcChHHHHHHHHHHcCCCCCCcEEEEEEEEEEe
Confidence 997765 442 22221 234444777888876 6788888888875
No 36
>PRK14823 putative deoxyribonucleoside-triphosphatase; Provisional
Probab=93.36 E-value=4.6 Score=34.51 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=64.3
Q ss_pred CeEEEecCCHHHHHHHHh-cCCceEEEc-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcce
Q 027128 32 VKIILGSSSMPRRKILAE-MGYEFSVMA-------ADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQT 103 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~-~gi~f~v~~-------s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~ 103 (228)
|+|++||+-+.-.+=++. ++-.+++++ .+++|.. .--.++|..||+.+++.+. .
T Consensus 1 mki~~aT~N~~K~~E~~~il~~~~~v~~~~~~~~~~~~~E~~-------~tf~enA~~KA~~~~~~~~-----------~ 62 (191)
T PRK14823 1 MKLVFATNNKHKLEEIRSILPEKIELLSLSDIGCHEDIPETA-------DTLEGNALLKAEYVYKKYG-----------Y 62 (191)
T ss_pred CEEEEECCChhHHHHHHHHhcCCCEEEehhhcCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHC-----------C
Confidence 369999999876544443 332344442 2333421 1356789999999988753 3
Q ss_pred EEEEcceEEEEC---C-------EEecCCC-CHHHHHHHHHHccC---CcEEEEEeEEEEE
Q 027128 104 ILIVADTVVVYE---G-------VIREKPS-SREEARRFIKDYSG---GQCATVSSVLVTN 150 (228)
Q Consensus 104 ~vI~aDTvV~~d---g-------~IlgKP~-d~eeA~~~L~~lsG---~~h~v~T~v~l~~ 150 (228)
++|+=||=+.++ | +..|... +.+.-..+|+.|.+ ++...++++|++.
T Consensus 63 pvlaDDSGL~v~aL~G~PGvysar~~g~~~~~~~~~~~ll~~l~~~~~R~A~f~c~i~~~~ 123 (191)
T PRK14823 63 DCFADDTGLEVEALNGAPGVYSARYAGGEHNAEANMRKLLEELEGKDNRKAQFRTVIALIL 123 (191)
T ss_pred CEEEecCEEEEeccCCCcchHHHHHhCcCCCHHHHHHHHHHHccCCCCCcEEEEEEEEEEe
Confidence 699999977654 4 3444433 33444567888876 6778888888874
No 37
>PRK02491 putative deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein; Reviewed
Probab=91.51 E-value=11 Score=35.08 Aligned_cols=121 Identities=15% Similarity=0.259 Sum_probs=73.4
Q ss_pred CCCCCChHHHHhhhccccCCCCCCeEEEecCCHHHH----HHHHhcCCceEEEcCC----CCCCCCCCCCHHHHHHHHHH
Q 027128 9 PDSPVSPSEFRQSLGNMEASATPVKIILGSSSMPRR----KILAEMGYEFSVMAAD----IDEKSIRKEKPEDLVMAIAE 80 (228)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~iILAS~SprR~----~lL~~~gi~f~v~~s~----iDE~~~~~~~p~~~v~~lA~ 80 (228)
|..-||--.|-.. ...+-..+|++||+-+.-. +||..+|+ ++++.. ..| ++ ....--.++|.
T Consensus 109 ~~~~~~~~~~~~~----~~~~~~~kIv~AT~N~~K~~E~~~iL~~~~i--ev~~l~~~~~~~E--i~--Etg~Tf~ENA~ 178 (328)
T PRK02491 109 PKEGVSTADFFGT----SKQGFGDTILIATRNEGKTKEFRKLFGKLGY--KVENLNDYPDLPE--VA--ETGMTFEENAR 178 (328)
T ss_pred CCCCccHHHHhcc----ccccCCCeEEEEcCChhHHHHHHHHHhhcCc--EEEehhhcCCCCC--cC--CCCCCHHHHHH
Confidence 6666776665432 1234456899999998764 34444554 444322 112 11 01123567899
Q ss_pred HHHHHHHHhhcccccccCCCcceEEEEcceEEEE---CC-------EEecCCC-CHHHHHHHHHHcc------CCcEEEE
Q 027128 81 AKAAAIISKLQITDSQLGNVKQTILIVADTVVVY---EG-------VIREKPS-SREEARRFIKDYS------GGQCATV 143 (228)
Q Consensus 81 ~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~~---dg-------~IlgKP~-d~eeA~~~L~~ls------G~~h~v~ 143 (228)
.||+.+++.+. .+||+=||=+.+ +| +..|... +.+.-...|..|. .|+...+
T Consensus 179 ~KA~~aa~~~g-----------~pvLADDSGL~VdAL~G~PGvySARfaG~~~~d~~n~~kLL~~L~~~~~~~dR~A~Fv 247 (328)
T PRK02491 179 LKAETISRLTG-----------KMVLADDSGLKVDALGGLPGVWSARFSGPDATDAENNAKLLHELAMVFDLKDRSAQFH 247 (328)
T ss_pred HHHHHHHHHHC-----------CCEEEEccEEEEcccCCCCcccchhhcCCCCCHHHHHHHHHHHhhCCCCCCCCcEEEE
Confidence 99999988763 368999997665 44 3455333 4444455666664 3678888
Q ss_pred EeEEEEE
Q 027128 144 SSVLVTN 150 (228)
Q Consensus 144 T~v~l~~ 150 (228)
|++|++.
T Consensus 248 c~lal~~ 254 (328)
T PRK02491 248 TTLVVAA 254 (328)
T ss_pred EEEEEEe
Confidence 8888875
No 38
>COG0127 Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism]
Probab=87.14 E-value=19 Score=31.11 Aligned_cols=106 Identities=19% Similarity=0.154 Sum_probs=68.8
Q ss_pred CeEEEecCCHHHHH----HHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEE
Q 027128 32 VKIILGSSSMPRRK----ILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (228)
Q Consensus 32 ~~iILAS~SprR~~----lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~ 107 (228)
++|++||+=+--.+ ||...|+++......-+|- .-+.....-.+.|..||+++++.. +..+|+
T Consensus 2 ~ki~~AT~N~~K~~E~~~il~~~~~ei~~~~~~~~~~--e~eEtg~tf~enA~~Ka~~~a~~~-----------g~pvia 68 (194)
T COG0127 2 MKIVLATGNKGKLRELKSILAPGGIEIESLKELGVEI--EVEETGLTFEENALLKARAAAKAT-----------GLPVIA 68 (194)
T ss_pred cEEEEEcCChHHHHHHHHHhcccCceEEEccccCCCC--CccchhhHHHHHHHHHHHHHHhhc-----------CCcEEE
Confidence 57999999886543 4444344544333333321 112345567788999999998763 357899
Q ss_pred cceEEEE---CC-------EEecCCCCHHHHHHHHHHccCC---cEEEEEeEEEEE
Q 027128 108 ADTVVVY---EG-------VIREKPSSREEARRFIKDYSGG---QCATVSSVLVTN 150 (228)
Q Consensus 108 aDTvV~~---dg-------~IlgKP~d~eeA~~~L~~lsG~---~h~v~T~v~l~~ 150 (228)
=|+=+.. || +..|-..|..-....|+.|+|. +.+.+|++++..
T Consensus 69 DDSGL~v~aL~G~PGvYSar~~~~~~d~~~~~klL~~l~~~~~R~A~F~~vi~~~~ 124 (194)
T COG0127 69 DDSGLCVDALNGFPGVYSARFAGEADDTIGNEKLLKLLEGVPDRSAYFVCVIVLAR 124 (194)
T ss_pred ecCceEEeccCCCCcceeehhcccCchhhhHHHHHHHhcCCCCceEEEEEEEEEEe
Confidence 9996654 44 4555555666777788888844 678888888865
No 39
>PRK14826 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=84.45 E-value=26 Score=30.68 Aligned_cols=108 Identities=19% Similarity=0.262 Sum_probs=66.4
Q ss_pred CCCeEEEecCCHHHHH----HHHhcCCceEEEc-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccC
Q 027128 30 TPVKIILGSSSMPRRK----ILAEMGYEFSVMA-------ADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLG 98 (228)
Q Consensus 30 ~~~~iILAS~SprR~~----lL~~~gi~f~v~~-------s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~ 98 (228)
...+|++||+-+.-.+ ||..++-.+++++ .++.|.. .--.++|..||+.+++.+....
T Consensus 7 ~~~~i~~aT~N~~K~~E~~~iL~~~~~~i~v~~~~~~~~~~~~~E~~-------~tf~eNA~~KA~~~~~~~~~~~---- 75 (222)
T PRK14826 7 ETITIVLATGNRDKVRELRPLLEHISPLFSVRSLADLGVEVDIEETE-------ETLEGNALLKADAIFELLSDRF---- 75 (222)
T ss_pred CCCEEEEEcCChhHHHHHHHHHHhcCCCeEEEehhHcCCCCCCCCCC-------CCHHHHHHHHHHHHHHHhCCcc----
Confidence 4578999999987643 4444421244444 1233332 1345789999999988764200
Q ss_pred CCcceEEEEcceEEEE---CC-------EEe----cCC-CCHHHHHHHHHHccC---CcEEEEEeEEEEE
Q 027128 99 NVKQTILIVADTVVVY---EG-------VIR----EKP-SSREEARRFIKDYSG---GQCATVSSVLVTN 150 (228)
Q Consensus 99 ~~~~~~vI~aDTvV~~---dg-------~Il----gKP-~d~eeA~~~L~~lsG---~~h~v~T~v~l~~ 150 (228)
+..++|+=||=+.+ +| +.. |+- -|.+....+|+.|.+ ++...++++|+++
T Consensus 76 --~~~~vlaDDSGL~vdAL~G~PGvySarf~~~~~G~~~~d~~~~~~LL~~l~~~~~R~A~f~c~ia~~~ 143 (222)
T PRK14826 76 --PFLIALADDTGLEVDALGGAPGVYSARFAPVPEGEKPTYEDNVRHLLSEMEGKTERSARFRTVIALKG 143 (222)
T ss_pred --cCCcEEEecCcEEEcccCCCCceehHhhhhhccCCCcCHHHHHHHHHHHccCCCCCcEEEEEEEEEEE
Confidence 13478999997665 44 223 322 234446667888876 6788888888873
No 40
>PRK14825 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=79.47 E-value=39 Score=28.99 Aligned_cols=102 Identities=11% Similarity=0.131 Sum_probs=63.6
Q ss_pred eEEEecCCHHHHHHHHh-c---CCceEEEcCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEE
Q 027128 33 KIILGSSSMPRRKILAE-M---GYEFSVMAAD--IDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILI 106 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~-~---gi~f~v~~s~--iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI 106 (228)
+|++||+-+.-.+=++. + ++++. ...+ ++|.. .--.++|..||+.+++.+.. ..+||
T Consensus 3 ~i~~aT~N~~K~~E~~~il~~~~~~i~-~~~~~~~~E~~-------~tf~enA~~KA~~~~~~~~~---------~~pvl 65 (199)
T PRK14825 3 TLFFATTNINKINEVKQILDIPNIKIE-IPQNFDIKETG-------KTFKENSLLKAKALFEILNN---------KQPVF 65 (199)
T ss_pred eEEEECCChhHHHHHHHHHhhcCceEe-ecccCCCCCCC-------CCHHHHHHHHHHHHHHHHCC---------CCcEE
Confidence 69999998876543333 3 33322 2222 33432 13567899999999887531 24689
Q ss_pred EcceEEEE---CC-------EE----ecCC-CCHHHHHHHHHHccC---CcEEEEEeEEEEEC
Q 027128 107 VADTVVVY---EG-------VI----REKP-SSREEARRFIKDYSG---GQCATVSSVLVTNL 151 (228)
Q Consensus 107 ~aDTvV~~---dg-------~I----lgKP-~d~eeA~~~L~~lsG---~~h~v~T~v~l~~~ 151 (228)
+=||=+.+ +| +. +|+- .|.+....+|..|.+ ++...++++|++..
T Consensus 66 aDDSGL~vdAL~G~PGvysar~~~~~~G~~~~~~~~~~~lL~~l~~~~~R~A~f~~~l~~~~~ 128 (199)
T PRK14825 66 SEDSGLCIEALNLEPGIYSKRYDQYKLGKKLSTNEKNHLIIDLMKNEKNRTAYFICNISYISK 128 (199)
T ss_pred EecCeEEEhhhCCCCceeeHhhhhhccCCCCCHHHHHHHHHHHcCCCCCCcEEEEEEEEEEEC
Confidence 99996665 44 12 2433 344456777888876 67888888888853
No 41
>PF12031 DUF3518: Domain of unknown function (DUF3518); InterPro: IPR021906 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 260 amino acids in length. This domain is found associated with PF01388 from PFAM.
Probab=56.18 E-value=17 Score=32.69 Aligned_cols=43 Identities=26% Similarity=0.456 Sum_probs=35.1
Q ss_pred CCCCCCCCChHHHH-hhhccccCCCCCCeEEEecCCHHHHHHHH
Q 027128 6 LTRPDSPVSPSEFR-QSLGNMEASATPVKIILGSSSMPRRKILA 48 (228)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~iILAS~SprR~~lL~ 48 (228)
+..|.+++|||.++ ..|-.|.-...+..+|||..+..|.|-|-
T Consensus 131 ~~~~~~~lSPqrlaLEaLcKLsV~e~NVDliLaTpp~sRlE~l~ 174 (257)
T PF12031_consen 131 TAGPHSPLSPQRLALEALCKLSVIENNVDLILATPPFSRLERLF 174 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHHhheeccCcceeeeCCCHHHHHHHH
Confidence 45678999999987 45666677778999999999999988654
No 42
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=47.12 E-value=83 Score=25.38 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=33.5
Q ss_pred EEecCCCCHHHHHHHHHHccCCcEE----EE--------EeEEEEECCCCeEEEEEEEEEEEE
Q 027128 117 VIREKPSSREEARRFIKDYSGGQCA----TV--------SSVLVTNLKTGFRKGEWDRVEIQF 167 (228)
Q Consensus 117 ~IlgKP~d~eeA~~~L~~lsG~~h~----v~--------T~v~l~~~~~~~~~~~~~~t~V~F 167 (228)
--++.|+++.||.+.+..|..+... |. .+|.|++..++.....+...++.|
T Consensus 12 t~V~aP~sE~e~~r~m~~l~~~s~~~~i~Vtl~Vp~~seG~V~l~D~~t~~~ias~~I~rI~f 74 (125)
T cd01211 12 SQLVNPDSENEMKRLMKVLDEQSGAQTINVTLVVPNNIEGTVKLIDAQSNKVIASFSIVNIRF 74 (125)
T ss_pred EEecCCCCHHHHHHHHHHHHhhcccCCeEEEEEecCCCCceEEEEcCCCCcEEEEEEEEEEEE
Confidence 3457899999999988777544322 21 236666666656566677777777
No 43
>COG3910 Predicted ATPase [General function prediction only]
Probab=44.08 E-value=19 Score=31.68 Aligned_cols=56 Identities=30% Similarity=0.524 Sum_probs=38.1
Q ss_pred CCCCCCCCChH---HHHhhhccccCCCCCCeEEEecCCHHHHHHHHhcCCc-eEEEcCCCCCCCC
Q 027128 6 LTRPDSPVSPS---EFRQSLGNMEASATPVKIILGSSSMPRRKILAEMGYE-FSVMAADIDEKSI 66 (228)
Q Consensus 6 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~iILAS~SprR~~lL~~~gi~-f~v~~s~iDE~~~ 66 (228)
+.-|.|+.||+ ++..+|++|-++. -+||.|.-||- ||.-=|-+ +++..+.+.|...
T Consensus 152 LDEPEa~LSp~RQlella~l~~la~sG--aQ~IiATHSPi---LlAiP~A~I~~~~~~g~~~~~f 211 (233)
T COG3910 152 LDEPEAALSPSRQLELLAILRDLADSG--AQIIIATHSPI---LLAIPGAEIYEISESGIEERDF 211 (233)
T ss_pred ecCccccCCHHHHHHHHHHHHHHHhcC--CeEEEEecChh---heeCCCcEEEEEecCCccccch
Confidence 34699999998 5677888888877 49999999994 33323333 3455555666544
No 44
>COG4090 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.21 E-value=49 Score=27.16 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=33.5
Q ss_pred EcceEEEECCEEecCC-CCHHHHHHHHHHccCCcEEEEEeEEEEE
Q 027128 107 VADTVVVYEGVIREKP-SSREEARRFIKDYSGGQCATVSSVLVTN 150 (228)
Q Consensus 107 ~aDTvV~~dg~IlgKP-~d~eeA~~~L~~lsG~~h~v~T~v~l~~ 150 (228)
.||+||.++|--+-|- .+.++|++.+..++++. .-|||..+
T Consensus 85 ~aDvvVLlGGLaMP~~gv~~d~~kel~ee~~~kk---liGvCfm~ 126 (154)
T COG4090 85 SADVVVLLGGLAMPKIGVTPDDAKELLEELGNKK---LIGVCFMN 126 (154)
T ss_pred cccEEEEEcccccCcCCCCHHHHHHHHHhcCCCc---eEEeeHHH
Confidence 5899999999766553 68899999999999994 44888763
No 45
>COG0181 HemC Porphobilinogen deaminase [Coenzyme metabolism]
Probab=41.95 E-value=19 Score=33.22 Aligned_cols=48 Identities=23% Similarity=0.461 Sum_probs=32.6
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEc--CCCCCCCCCCC---CHHHHHHHHHHHH
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEKSIRKE---KPEDLVMAIAEAK 82 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~--s~iDE~~~~~~---~p~~~v~~lA~~K 82 (228)
-+.+++|.||+..|+.+..++++.+ -++|-+ +++. .-..+++..|-.|
T Consensus 121 a~VGTSSlRR~aql~~~rPdl~i~~lRGNVdTR-L~KL~~g~yDAIILA~AGL~ 173 (307)
T COG0181 121 AVVGTSSLRRQAQLKALRPDLKIEPLRGNVDTR-LRKLDEGEYDAIILAAAGLK 173 (307)
T ss_pred CccccchHHHHHHHHHhCCCCeEEeccCcHHHH-HHHhhcCCccHHHHHHHHHH
Confidence 5899999999999999987776665 577765 3332 2344455444433
No 46
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=41.86 E-value=32 Score=28.81 Aligned_cols=28 Identities=39% Similarity=0.491 Sum_probs=23.0
Q ss_pred CCeEEEecCCHHH-----HHHHHhcCCceEEEc
Q 027128 31 PVKIILGSSSMPR-----RKILAEMGYEFSVMA 58 (228)
Q Consensus 31 ~~~iILAS~SprR-----~~lL~~~gi~f~v~~ 58 (228)
..-||++|.|-|. .++|+++|++|++..
T Consensus 4 ~V~IIMGS~SD~~~mk~Aa~~L~~fgi~ye~~V 36 (162)
T COG0041 4 KVGIIMGSKSDWDTMKKAAEILEEFGVPYEVRV 36 (162)
T ss_pred eEEEEecCcchHHHHHHHHHHHHHcCCCeEEEE
Confidence 3469999999887 579999999997554
No 47
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=41.77 E-value=42 Score=30.49 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=29.5
Q ss_pred CHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHH
Q 027128 40 SMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIA 79 (228)
Q Consensus 40 SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA 79 (228)
-..|.++|+.+|+++.++-+ |||. +...+|++++..+-
T Consensus 56 ~~~k~~~l~~~Gvd~~~~~~-F~~~-~a~ls~e~Fi~~~l 93 (288)
T TIGR00083 56 LEDKARQLQIKGVEQLLVVV-FDEE-FANLSALQFIDQLI 93 (288)
T ss_pred HHHHHHHHHHcCCCEEEEeC-CCHH-HHcCCHHHHHHHHH
Confidence 37899999999998765543 7774 66788999998654
No 48
>PF05125 Phage_cap_P2: Phage major capsid protein, P2 family ; InterPro: IPR006441 This entry is represented by Bacteriophage P2, GpN. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family represents the major capsid protein component of the heads (capsids) of bacteriophage P2 and related phage including prophage. These sequences represent one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. ; GO: 0019028 viral capsid
Probab=41.33 E-value=72 Score=29.82 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=53.5
Q ss_pred eEEEEcceEEEECCEEecC--CCCHHHHHHHH---HHccCCcEEEE-----EeEEEEECCCCeEEEEEEEEEEEEcCCC-
Q 027128 103 TILIVADTVVVYEGVIREK--PSSREEARRFI---KDYSGGQCATV-----SSVLVTNLKTGFRKGEWDRVEIQFHEIP- 171 (228)
Q Consensus 103 ~~vI~aDTvV~~dg~IlgK--P~d~eeA~~~L---~~lsG~~h~v~-----T~v~l~~~~~~~~~~~~~~t~V~F~~ls- 171 (228)
.+|+|+|-+...--.++.+ |.+...|.+++ +++-|...... .++.|...++=.+...-..-+=+..+-+
T Consensus 224 VvivGrdLladk~~~l~n~~~~ptE~~A~~~i~~~k~iGGlpa~~vPfFP~~~~lIT~l~NLSIY~Q~gs~RR~~~d~p~ 303 (333)
T PF05125_consen 224 VVIVGRDLLADKYFPLINAANKPTEKLAAQLIISQKRIGGLPAVTVPFFPANALLITSLDNLSIYWQEGSRRRKIKDNPK 303 (333)
T ss_pred EEEEChhHHhhhhhhhhccCCCchHHHHHHHHHHHhhhcCCceeecCCCCCCeEEEEecCceeEEEEcCcEEeecccCch
Confidence 4456666665544455555 44555666654 56777764331 2333333332111111111112222333
Q ss_pred HHHHHHHHHcCCCccceeeeeecccCcccceeeee
Q 027128 172 DEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVV 206 (228)
Q Consensus 172 ~~~I~~Yl~tge~~~kAG~Y~Iqg~~g~~~i~~I~ 206 (228)
.+.|+.|-...| ||.||+....++||.|+
T Consensus 304 r~rie~y~s~Ne------~YvVEd~~~~a~iE~i~ 332 (333)
T PF05125_consen 304 RDRIENYESRNE------AYVVEDYGKAALIENIE 332 (333)
T ss_pred hhhhhhhhhccc------cEEecccceEEEEeecc
Confidence 367888887777 79999977777888775
No 49
>COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain [General function prediction only]
Probab=39.40 E-value=98 Score=30.00 Aligned_cols=62 Identities=24% Similarity=0.206 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEEEECCEEecCCCCHHHHHHHHHHccCCcEEE
Q 027128 70 KPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVVVYEGVIREKPSSREEARRFIKDYSGGQCAT 142 (228)
Q Consensus 70 ~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v 142 (228)
.+.+.|...|.+.++.+... +.+..++.-|+ .+++=++.+|+.+.+++.++|...-|--...
T Consensus 288 ~~e~~AKAvalAl~~~alae----------nR~~~~~lF~s-~~~~~el~~k~~~~~e~i~fL~~~f~GGTD~ 349 (437)
T COG2425 288 FKEQWAKAVALALMRIALAE----------NRDCYVILFDS-EVIEYELYEKKIDIEELIEFLSYVFGGGTDI 349 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHh----------ccceEEEEecc-cceeeeecCCccCHHHHHHHHhhhcCCCCCh
Confidence 57888888888888776654 23577888888 6677799999999999999998776443333
No 50
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=39.05 E-value=1.4e+02 Score=27.58 Aligned_cols=137 Identities=20% Similarity=0.192 Sum_probs=77.6
Q ss_pred ecCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEEEECC
Q 027128 37 GSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVVVYEG 116 (228)
Q Consensus 37 AS~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~~dg 116 (228)
.+.|+.|+++|+.+|-+....+. ++.. +.-|..||+.+++..+ ...+-.||
T Consensus 94 ~~~S~er~~~l~a~GAevi~t~~--~~g~----------~~~a~~~a~el~~~~p-----------~~~~~~~Q------ 144 (300)
T COG0031 94 ETMSQERRKLLRALGAEVILTPG--APGN----------MKGAIERAKELAAEIP-----------GYAVWLNQ------ 144 (300)
T ss_pred CCCCHHHHHHHHHcCCEEEEcCC--CCCc----------hHHHHHHHHHHHHhCC-----------CceEchhh------
Confidence 48899999999999977766655 2221 2346667776666543 12233333
Q ss_pred EEecCCCCHH-----HHHHHHHHccCCcEEEEEeEEEEECCCCeEE---------EEEEEEEEEEcCCCHHHHHHHHHcC
Q 027128 117 VIREKPSSRE-----EARRFIKDYSGGQCATVSSVLVTNLKTGFRK---------GEWDRVEIQFHEIPDEVIEKLIEEG 182 (228)
Q Consensus 117 ~IlgKP~d~e-----eA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~---------~~~~~t~V~F~~ls~~~I~~Yl~tg 182 (228)
|+=|.|.+ .|.++++.+.|+...++.|+ .+|-.. .......|-..+... .+ +..|
T Consensus 145 --f~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagv-----GTGGTitGvar~Lk~~~p~i~iv~vdP~~S-~~---~~~G 213 (300)
T COG0031 145 --FENPANPEAHYETTGPEIWQQTDGKVDAFVAGV-----GTGGTITGVARYLKERNPNVRIVAVDPEGS-VL---LSGG 213 (300)
T ss_pred --cCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeC-----CcchhHHHHHHHHHhhCCCcEEEEECCCCC-cc---cCCC
Confidence 55588775 56688999999865555553 222110 011111111122110 01 1112
Q ss_pred CCccceeeeeecccCcccceeee-ec-ccCCcccCCHHH
Q 027128 183 IVLNVAGGLIIEHSLILPYVKQV-VG-AMDSVMGLPKAV 219 (228)
Q Consensus 183 e~~~kAG~Y~Iqg~~g~~~i~~I-~G-~~~nVvGLPl~~ 219 (228)
+ |.+.||| +|..|+..+ .- -++.|+-.+-..
T Consensus 214 ~-----g~~~i~G-IG~~~ip~~~~~~~iD~v~~V~d~~ 246 (300)
T COG0031 214 E-----GPHKIEG-IGAGFVPENLDLDLIDEVIRVSDEE 246 (300)
T ss_pred C-----CCcccCC-CCCCcCCcccccccCceEEEECHHH
Confidence 2 8999999 799998633 22 257777777654
No 51
>PF01379 Porphobil_deam: Porphobilinogen deaminase, dipyromethane cofactor binding domain; InterPro: IPR022417 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. Porphobilinogen deaminase (also known as hydroxymethylbilane synthase, 2.5.1.61 from EC) functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses the polymerisation of four PBG molecules into the tetrapyrrole structure, preuroporphyrinogen, with the concomitant release of four molecules of ammonia. This enzyme uses a unique dipyrro-methane cofactor made from two molecules of PBG, which is covalently attached to a cysteine side chain. The tetrapyrrole product is synthesized in an ordered, sequential fashion, by initial attachment of the first pyrrole unit (ring A) to the cofactor, followed by subsequent additions of the remaining pyrrole units (rings B, C, D) to the growing pyrrole chain []. The link between the pyrrole ring and the cofactor is broken once all the pyrroles have been added. This enzyme is folded into three distinct domains that enclose a single, large active site that makes use of an aspartic acid as its one essential catalytic residue, acting as a general acid/base during catalysis [, ]. A deficiency of hydroxymethylbilane synthase is implicated in the neuropathic disease, Acute Intermittent Porphyria (AIP) []. This entry represents the N-terminal domains 1 and 2 of porphobilinogen deaminase, an enzyme involved in tetrapyrrole biosynthesis. The structure of this domain consists of a duplication of two similar intertwined domains with three layers of (a/b/a) each. Porphobilinogen deaminase has a three-domain structure. Domains 1 (N-terminal) and 2 are duplications with the same structure, resembling the transferrins and periplasmic binding proteins. The dipyrromethane cofactor is covalently linked to domain 3 (C-terminal), but is bound by extensive salt-bridges and hydrogen-bonds within the cleft between domains 1 and 2, at a position corresponding to the binding sites for small-molecule ligands in the analogous proteins []. The enzyme has a single catalytic site, and the flexibility between domains is thought to aid elongation of the polypyrrole product in the active-site cleft of the enzyme.; GO: 0033014 tetrapyrrole biosynthetic process; PDB: 1GTK_A 1AH5_A 2YPN_A 1PDA_A 1YPN_A 3EQ1_B 3ECR_A.
Probab=36.84 E-value=30 Score=30.26 Aligned_cols=26 Identities=27% Similarity=0.423 Sum_probs=16.9
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEc
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMA 58 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~ 58 (228)
.-+.+++|+||+..|+.+-.++++++
T Consensus 120 ga~IGTsS~RR~aql~~~~pdl~~~~ 145 (215)
T PF01379_consen 120 GARIGTSSLRRRAQLKRLRPDLEVVP 145 (215)
T ss_dssp T-EEE---HHHHHHHHHH-TTSEEE-
T ss_pred ccccCCCCHHHHHHHHHhccCCeEEE
Confidence 47899999999999999877666654
No 52
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=35.36 E-value=48 Score=27.49 Aligned_cols=38 Identities=13% Similarity=0.348 Sum_probs=26.6
Q ss_pred CCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHH
Q 027128 39 SSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAI 78 (228)
Q Consensus 39 ~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~l 78 (228)
+-..|.++|+.+|++..++ -++||. +...+|+++...+
T Consensus 57 ~~e~R~~~l~~l~vd~v~~-~~f~~~-~~~~s~~~Fi~~i 94 (180)
T cd02064 57 TLEEKLELLESLGVDYLLV-LPFDKE-FASLSAEEFVEDL 94 (180)
T ss_pred CHHHHHHHHHHcCCCEEEE-eCCCHH-HHcCCHHHHHHHH
Confidence 3477999999999776444 367764 4456788777654
No 53
>cd00494 HMBS Hydroxymethylbilane synthase (HMBS), also known as porphobilinogen deaminase (PBGD), is an intermediate enzyme in the biosynthetic pathway of tetrapyrrolic ring systems, such as heme, chlorophylls, and vitamin B12. HMBS catalyzes the conversion of porphobilinogen (PBG) into hydroxymethylbilane (HMB). HMBS consists of three domains, and is believed to bind substrate through a hinge-bending motion of domains I and II. HMBS is found in all organisms except viruses.
Probab=34.88 E-value=38 Score=31.04 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=24.8
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~--s~iDE~ 64 (228)
-+.+++|+||+..|+.+-.++++++ -++|.+
T Consensus 118 a~IGTsS~RR~aql~~~rpdl~~~~iRGNV~TR 150 (292)
T cd00494 118 SVVGTSSLRRQAQLKRKRPDLKFEPLRGNVDTR 150 (292)
T ss_pred CEEecCCHHHHHHHHHHCCCCEEEEcCCCHHHH
Confidence 4899999999999999877766664 566665
No 54
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=34.48 E-value=1.1e+02 Score=25.04 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=19.2
Q ss_pred CCeEEEecCCHHH--HHHHHhcCCc
Q 027128 31 PVKIILGSSSMPR--RKILAEMGYE 53 (228)
Q Consensus 31 ~~~iILAS~SprR--~~lL~~~gi~ 53 (228)
.+++.++|++++. ..+|+.+|+.
T Consensus 122 g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 122 PKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred CCcEEEECCCCHHHHHHHHHHcCch
Confidence 5789999999887 6778999985
No 55
>PHA02538 N capsid protein; Provisional
Probab=34.47 E-value=1e+02 Score=29.06 Aligned_cols=98 Identities=17% Similarity=0.120 Sum_probs=51.2
Q ss_pred eEEEEcceEEEECCEEecC--CCCHHHHHHHH---HHccCCcEEEE-----EeEEEEECCCCeEEEEEEEEEEEEcCCC-
Q 027128 103 TILIVADTVVVYEGVIREK--PSSREEARRFI---KDYSGGQCATV-----SSVLVTNLKTGFRKGEWDRVEIQFHEIP- 171 (228)
Q Consensus 103 ~~vI~aDTvV~~dg~IlgK--P~d~eeA~~~L---~~lsG~~h~v~-----T~v~l~~~~~~~~~~~~~~t~V~F~~ls- 171 (228)
.+|+|+|-+...--.++.| |.+..-|.+++ +++-|...... -++.|...++=.+...-...+=+..+-+
T Consensus 229 VvivG~dLla~~~~~l~n~~~~ptE~~Aa~~i~~~k~iGGlpa~~~PffP~~~l~VT~L~NLsIY~Q~gs~RR~~~d~p~ 308 (348)
T PHA02538 229 VVIVGRDLLADKYFPIVNKAQKPTEKIAADLIISQKRIGGLPAVRVPFFPANAMLVTTLENLSIYTQEGSRRRSLKDNPD 308 (348)
T ss_pred EEEEChhhhhhhhhhhhhcCCCcHHHHHHHHHHHHhhcCCCcceecCCCCCCeEEEEeccceeEEEEcCcEEeecccchh
Confidence 4456666665544455544 44455677765 45667654321 2333333332122111111122222333
Q ss_pred HHHHHHHHHcCCCccceeeeeecccCcccceeeee
Q 027128 172 DEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVV 206 (228)
Q Consensus 172 ~~~I~~Yl~tge~~~kAG~Y~Iqg~~g~~~i~~I~ 206 (228)
.+.|+.|-...| ||.||+....++|+.|+
T Consensus 309 r~riEny~s~Ne------~YvVEd~~~~a~iE~i~ 337 (348)
T PHA02538 309 KKRIENYESRNE------AYVVEDYGCGCLVENIK 337 (348)
T ss_pred hhhhhhhhhccc------cEEeccccceEEeecce
Confidence 366777777666 79999976777777764
No 56
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=33.43 E-value=41 Score=24.63 Aligned_cols=22 Identities=36% Similarity=0.596 Sum_probs=18.9
Q ss_pred HHHHhcCCceEEEcCCCCCCCC
Q 027128 45 KILAEMGYEFSVMAADIDEKSI 66 (228)
Q Consensus 45 ~lL~~~gi~f~v~~s~iDE~~~ 66 (228)
++|+..|+.|+-+|+.+|=-.+
T Consensus 23 ~I~E~~~is~Eh~PSGID~~Si 44 (76)
T cd04911 23 SILEDNGISYEHMPSGIDDISI 44 (76)
T ss_pred HHHHHcCCCEeeecCCCccEEE
Confidence 6899999999999999986443
No 57
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=32.89 E-value=75 Score=29.03 Aligned_cols=35 Identities=23% Similarity=0.488 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHH
Q 027128 41 MPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMA 77 (228)
Q Consensus 41 prR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~ 77 (228)
..|.++|+.+|+++.++ -+|+|+ +...+|++++..
T Consensus 73 eeR~~~l~~~gVD~~~~-~~F~~~-~~~ls~e~Fi~~ 107 (305)
T PRK05627 73 RDKAELLAELGVDYVLV-LPFDEE-FAKLSAEEFIED 107 (305)
T ss_pred HHHHHHHHHcCCCEEEE-ecCCHH-HhcCCHHHHHHH
Confidence 67999999999887766 568774 556788888875
No 58
>PRK00072 hemC porphobilinogen deaminase; Reviewed
Probab=32.31 E-value=44 Score=30.63 Aligned_cols=31 Identities=19% Similarity=0.473 Sum_probs=25.9
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~--s~iDE~ 64 (228)
-+.+++|+||+..|+.+-.++++++ -++|.+
T Consensus 122 a~IGTsS~RR~aql~~~~Pdl~~~~iRGNV~TR 154 (295)
T PRK00072 122 AVVGTSSLRRQAQLLALRPDLEIKPLRGNVDTR 154 (295)
T ss_pred CEEecCcHHHHHHHHHHCcCCEEEECccCHHHH
Confidence 5899999999999999988887776 566665
No 59
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=32.11 E-value=49 Score=27.14 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=46.0
Q ss_pred cCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEcceEEEECCE
Q 027128 38 SSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTVVVYEGV 117 (228)
Q Consensus 38 S~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~~dg~ 117 (228)
++-..|.++|+.+|+++.++- +|+++ +...+|++++..+-. +++ .-..||+|.|=-
T Consensus 62 ~s~~ek~~~l~~~Gvd~~~~~-~F~~~-~~~ls~~~Fi~~iL~-------~~l---------~~~~ivvG~Dfr------ 117 (157)
T PF06574_consen 62 TSLEEKLELLESLGVDYVIVI-PFTEE-FANLSPEDFIEKILK-------EKL---------NVKHIVVGEDFR------ 117 (157)
T ss_dssp S-HHHHHHHHHHTTESEEEEE--CCCH-HCCS-HHHHHHHHCC-------CHC---------TEEEEEEETT-E------
T ss_pred CCHHHHHHHHHHcCCCEEEEe-cchHH-HHcCCHHHHHHHHHH-------hcC---------CccEEEEccCcc------
Confidence 455679999999999876543 67764 556788888764211 122 124788888854
Q ss_pred EecCCCCHHHHHHHHHHccCCcE
Q 027128 118 IREKPSSREEARRFIKDYSGGQC 140 (228)
Q Consensus 118 IlgKP~d~eeA~~~L~~lsG~~h 140 (228)
||| +++--.++|+.|..+..
T Consensus 118 -FG~--~~~G~~~~L~~~~~~~g 137 (157)
T PF06574_consen 118 -FGK--NRSGDVELLKELGKEYG 137 (157)
T ss_dssp -ESG--GGEEEHHHHHHCTTTT-
T ss_pred -CCC--CCCCCHHHHHHhcccCc
Confidence 455 33345678888876643
No 60
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.24 E-value=3.2e+02 Score=23.06 Aligned_cols=92 Identities=15% Similarity=0.244 Sum_probs=57.1
Q ss_pred CChHHHHhhhccccCCCCCCeEEEec---CCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 027128 13 VSPSEFRQSLGNMEASATPVKIILGS---SSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISK 89 (228)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~iILAS---~SprR~~lL~~~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~ 89 (228)
-=|-+|+++| . +....=||.. .|..--+-|+.+--+..++.-+|||+. +
T Consensus 17 ~Lp~KFkklL--v---Pgki~hilctGNlcs~e~~dylk~l~~dvhiVrGeFD~~~-----------------------~ 68 (183)
T KOG3325|consen 17 DLPAKFKKLL--V---PGKIQHILCTGNLCSKESYDYLKTLSSDVHIVRGEFDENL-----------------------K 68 (183)
T ss_pred ccCHHHHhcc--C---CCceeEEEEeCCcchHHHHHHHHhhCCCcEEEecccCccc-----------------------c
Confidence 3478999988 2 2233334433 344555677778788999999999972 2
Q ss_pred hcccccccCCCcceEEEEcceEEEECC-EEecCCCCHHHHHHHHHHc-------cCCcEEE
Q 027128 90 LQITDSQLGNVKQTILIVADTVVVYEG-VIREKPSSREEARRFIKDY-------SGGQCAT 142 (228)
Q Consensus 90 ~~~~~~~~~~~~~~~vI~aDTvV~~dg-~IlgKP~d~eeA~~~L~~l-------sG~~h~v 142 (228)
++. ...+-+|+=.+=.|+| +++ |.+.-++..+|.+. .|.+|++
T Consensus 69 yP~--------~kvvtvGqfkIG~chGhqVi--P~gd~~sL~~LaRqldvDILl~G~Th~f 119 (183)
T KOG3325|consen 69 YPE--------NKVVTVGQFKIGLCHGHQVI--PWGDPESLALLARQLDVDILLTGHTHKF 119 (183)
T ss_pred CCc--------cceEEeccEEEEeecCcEee--cCCCHHHHHHHHHhcCCcEEEeCCceeE
Confidence 332 2344455555555555 333 77777788888764 5777764
No 61
>TIGR00603 rad25 DNA repair helicase rad25. All proteins in this family for which functions are known are DNA-DNA helicases used for the initiation of nucleotide excision repair and transacription as part of the TFIIH complex.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=30.79 E-value=99 Score=31.94 Aligned_cols=44 Identities=30% Similarity=0.412 Sum_probs=34.8
Q ss_pred ChHHHHhhhccccCCCCCCe--------EEEecC-------CHHHHHHHHhcCCceEEE
Q 027128 14 SPSEFRQSLGNMEASATPVK--------IILGSS-------SMPRRKILAEMGYEFSVM 57 (228)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~--------iILAS~-------SprR~~lL~~~gi~f~v~ 57 (228)
|+..|.|++|+..-...... +-|.|. |.+|++.|-.-|+.|.|+
T Consensus 573 S~~q~iQRlGRilR~~~~~~~~~~~A~fY~lVs~dT~E~~~s~~Rq~fl~~qGY~~~vi 631 (732)
T TIGR00603 573 SRRQEAQRLGRILRAKKGSDAEEYNAFFYSLVSKDTQEMYYSTKRQRFLVDQGYSFKVI 631 (732)
T ss_pred CHHHHHHHhcccccCCCCCccccccceEEEEecCCchHHHHHHHHHHHHHHCCCeeEEE
Confidence 89999999999766442211 567775 788999999999999987
No 62
>TIGR01551 major_capsid_P2 phage major capsid protein, P2 family. This model family represents the major capsid protein component of the heads (capsids) of bacteriophage P2 and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease.
Probab=30.29 E-value=1.3e+02 Score=28.09 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=51.6
Q ss_pred eEEEEcceEEEECCEEecC--CCCHHHHHHHHH---HccCCcEEEE-----EeEEEEECCCCeEEEEEEEEEEEEcCCC-
Q 027128 103 TILIVADTVVVYEGVIREK--PSSREEARRFIK---DYSGGQCATV-----SSVLVTNLKTGFRKGEWDRVEIQFHEIP- 171 (228)
Q Consensus 103 ~~vI~aDTvV~~dg~IlgK--P~d~eeA~~~L~---~lsG~~h~v~-----T~v~l~~~~~~~~~~~~~~t~V~F~~ls- 171 (228)
.+|+|+|-+...--.++.| |.++.-|.+++. ++-|...... .++.|...++=.+...-...+=+..+-+
T Consensus 218 VvivG~dLla~~~~~l~n~~~~ptE~~Aa~~~~~~k~igGl~a~~~PffP~~~l~VT~L~NLsIY~Q~gs~RR~~~~~~~ 297 (327)
T TIGR01551 218 VVLVGADLVSKETKLIQQKHLTPSEKIALGSHNLMGSFGGMNAITPPNLPDRAAAVTTLKNLSVYTQAGSVRRSLRNDED 297 (327)
T ss_pred EEEEChhhhhhhhhhhhhcCCCcHHHHHHHHHHHHHhhCCCcceecCCCCCCeEEEEeccceeEEEEcCcEEeecccchh
Confidence 4456666655544445443 344556666654 7778764331 3344433332222211112222222333
Q ss_pred HHHHHHHHHcCCCccceeeeeecccCcccceeeee
Q 027128 172 DEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVV 206 (228)
Q Consensus 172 ~~~I~~Yl~tge~~~kAG~Y~Iqg~~g~~~i~~I~ 206 (228)
.+.|+.|-...| ||.||+....++|+.|+
T Consensus 298 r~riEn~~s~Ne------~YvVEd~~~~a~ie~i~ 326 (327)
T TIGR01551 298 RKRLVTSYYRQE------GYVVEDLGLMTAIDHTK 326 (327)
T ss_pred hhhhhhhhhccc------ceEEccCcceEEeeccc
Confidence 367788777766 79999976667777653
No 63
>PRK13843 conjugal transfer protein TraH; Provisional
Probab=29.73 E-value=81 Score=27.53 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=22.4
Q ss_pred ECCE--EecCCCCHHHHHHHHHHccCCc
Q 027128 114 YEGV--IREKPSSREEARRFIKDYSGGQ 139 (228)
Q Consensus 114 ~dg~--IlgKP~d~eeA~~~L~~lsG~~ 139 (228)
.+|+ +..||++.+||...+++|-|+-
T Consensus 39 ~ggr~~L~~~P~s~~EA~~~vr~l~~~g 66 (207)
T PRK13843 39 SGGRLVLVPKPKTPDEAMALIRQYVGQA 66 (207)
T ss_pred eCCeeeecCCCCCHHHHHHHHHHHHhcC
Confidence 3565 4699999999999999999886
No 64
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=29.60 E-value=93 Score=23.29 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=24.4
Q ss_pred CeEEEecCCHHHHHHHHhcCCceEEEcCCCC
Q 027128 32 VKIILGSSSMPRRKILAEMGYEFSVMAADID 62 (228)
Q Consensus 32 ~~iILAS~SprR~~lL~~~gi~f~v~~s~iD 62 (228)
.++|....|+.|+++++++|.+..+-..+-|
T Consensus 15 ~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~ 45 (130)
T PF00107_consen 15 AKVIATDRSEEKLELAKELGADHVIDYSDDD 45 (130)
T ss_dssp SEEEEEESSHHHHHHHHHTTESEEEETTTSS
T ss_pred CEEEEEECCHHHHHHHHhhcccccccccccc
Confidence 5899999999999999999966555544433
No 65
>PF09897 DUF2124: Uncharacterized protein conserved in archaea (DUF2124); InterPro: IPR009183 There are currently no experimental data for members of this group of archaeal proteins, nor do they exhibit features indicative of any function.; PDB: 2R47_D.
Probab=29.08 E-value=44 Score=27.67 Aligned_cols=39 Identities=23% Similarity=0.336 Sum_probs=31.8
Q ss_pred cceEEEECCEEecC-CCCHHHHHHHHHHccCCcEEEEEeEEEE
Q 027128 108 ADTVVVYEGVIREK-PSSREEARRFIKDYSGGQCATVSSVLVT 149 (228)
Q Consensus 108 aDTvV~~dg~IlgK-P~d~eeA~~~L~~lsG~~h~v~T~v~l~ 149 (228)
+|.||.++|--+-| +.+.|++.+++.+++.+. +-|||..
T Consensus 81 ~D~vVlmGGLAMP~~~v~~e~v~~li~ki~~~~---iiGiCFm 120 (147)
T PF09897_consen 81 PDVVVLMGGLAMPKSGVTPEDVNELIKKISPKK---IIGICFM 120 (147)
T ss_dssp EEEEEEEGGGGSTTTS--HHHHHHHHHHHEEEE---EEEEEET
T ss_pred CCEEEEEcccccCCCCCCHHHHHHHHHHhCcCC---EEEEehH
Confidence 99999999966655 789999999999999888 5688885
No 66
>TIGR00212 hemC porphobilinogen deaminase. Biosynthesis of cofactors, prosthetic groups, and carriers: Heme and porphyrin
Probab=27.59 E-value=58 Score=29.83 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=24.9
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~--s~iDE~ 64 (228)
-+.+++|+||+..|+.+-.++++++ -++|.+
T Consensus 118 a~VGTsS~RR~aql~~~rPdl~i~~iRGNV~TR 150 (292)
T TIGR00212 118 AKVGTSSLRRKAQLKAIRPDLKIEPLRGNIDTR 150 (292)
T ss_pred CEeccCCHHHHHHHHHHCCCCEEEECcCCHHHH
Confidence 5899999999999999887777665 456654
No 67
>PF10288 DUF2392: Protein of unknown function (DUF2392); InterPro: IPR019407 Cytoplasmic thiouridylase is a highly conserved complex responsible for the 2-thiolation of cytosolic tRNAs []. Inactivation of this complex leads to a loss of thiolation on tRNAs, decreased viability and aberrant cell development. This entry represents the second subunit of this complex.
Probab=27.45 E-value=11 Score=28.94 Aligned_cols=45 Identities=9% Similarity=0.070 Sum_probs=34.6
Q ss_pred cCCCHHHHHHHHHcCCCc--------------cceeeeeecccCcccceeeeecccCCcc
Q 027128 168 HEIPDEVIEKLIEEGIVL--------------NVAGGLIIEHSLILPYVKQVVGAMDSVM 213 (228)
Q Consensus 168 ~~ls~~~I~~Yl~tge~~--------------~kAG~Y~Iqg~~g~~~i~~I~G~~~nVv 213 (228)
|++...||..|....... ....--.|+. ....||..++.+|.++|
T Consensus 39 Rd~l~kEi~~Y~~~~~l~~~~~~~~~~~~~~~~~~~~~SI~~-L~~~fi~~Le~~ypstv 97 (107)
T PF10288_consen 39 RDLLKKEIAFYNRLCGLESVLVPSLDTDSSQSKSSKNMSINE-LTEDFIDNLEENYPSTV 97 (107)
T ss_pred HhCCHHHHHHHHHHhCcchhhcccccccccccccCcCCCHHH-HHHHHHHHHhCcCcchH
Confidence 789999999999854211 2355667888 78889999999997764
No 68
>PRK01066 porphobilinogen deaminase; Provisional
Probab=27.31 E-value=58 Score=28.90 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=24.8
Q ss_pred eEEEecCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 027128 33 KIILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (228)
Q Consensus 33 ~iILAS~SprR~~lL~~~gi~f~v~~--s~iDE~ 64 (228)
.-+.+++|+||+..|+.+-.++.+++ -++|.+
T Consensus 132 ga~IGTSS~RR~aql~~~rPdl~v~~iRGNV~TR 165 (231)
T PRK01066 132 RPRIGSSSLRREELLKLLFPSGIILDIRGTIEER 165 (231)
T ss_pred CCEEeCChHHHHHHHHHHCCCCEEEeCcCCHHHH
Confidence 35889999999999999877766665 455554
No 69
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism]
Probab=27.21 E-value=29 Score=34.02 Aligned_cols=46 Identities=26% Similarity=0.267 Sum_probs=35.9
Q ss_pred HHHHHHHHH-cCCCccceeeeeecccCcccceeeeecccCCcccCCHH
Q 027128 172 DEVIEKLIE-EGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKA 218 (228)
Q Consensus 172 ~~~I~~Yl~-tge~~~kAG~Y~Iqg~~g~~~i~~I~G~~~nVvGLPl~ 218 (228)
+++|.+|+. .+..++-||||++=| .--.=...++|..-.+=|||+-
T Consensus 315 d~~i~~~~~~~~~viGICGG~QmLG-~~i~Dp~g~Eg~~~~~~GLgLl 361 (486)
T COG1492 315 DEKILEYARKGGDVIGICGGYQMLG-RRLKDPSGIEGAKGEAEGLGLL 361 (486)
T ss_pred HHHHHHHHhCCCCEEEEcchHHhhh-hhhcCcccccCcccccCCccce
Confidence 568889998 468899999999877 3333445889988888899974
No 70
>PRK11590 hypothetical protein; Provisional
Probab=25.22 E-value=4e+02 Score=22.18 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=27.0
Q ss_pred EEEcceEEEECCEEecCCCCHHHHHHHHHHccCC
Q 027128 105 LIVADTVVVYEGVIREKPSSREEARRFIKDYSGG 138 (228)
Q Consensus 105 vI~aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~ 138 (228)
+||.+--+.+.|++.|.|---++=.+.|+.+-|.
T Consensus 141 ~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~ 174 (211)
T PRK11590 141 LIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT 174 (211)
T ss_pred eEEEEEEEEEccEECCccCCChHHHHHHHHHhCC
Confidence 5677755678899999999988888888887653
No 71
>PLN02691 porphobilinogen deaminase
Probab=24.97 E-value=68 Score=30.18 Aligned_cols=31 Identities=13% Similarity=0.333 Sum_probs=24.9
Q ss_pred EEEecCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 027128 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (228)
Q Consensus 34 iILAS~SprR~~lL~~~gi~f~v~~--s~iDE~ 64 (228)
-+++++|+||+..|+.+-.+.++++ -++|.+
T Consensus 165 a~IGTSS~RR~aql~~~rPdl~v~~iRGNVdTR 197 (351)
T PLN02691 165 SVVGTASLRRQSQILHKYPHLKVVNFRGNVQTR 197 (351)
T ss_pred CEeccCcHHHHHHHHHHCCCCEEEeccCCHHHH
Confidence 5899999999999999877766665 466665
No 72
>PF06690 DUF1188: Protein of unknown function (DUF1188); InterPro: IPR009573 This family consists of several hypothetical archaeal proteins of around 260 residues in length, which seem to be specific to Methanobacterium, Methanococcus and Methanopyrus species. The function of this family is unknown.
Probab=22.60 E-value=1.6e+02 Score=26.53 Aligned_cols=35 Identities=37% Similarity=0.308 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcccccccCCCcceEEEEc
Q 027128 69 EKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (228)
Q Consensus 69 ~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~~~~vI~a 108 (228)
..+.+++..+++.||.++..=+...+. .+.+|+||
T Consensus 16 ~~~~DIi~~I~ekKa~ai~~~le~~~~-----k~~lI~G~ 50 (252)
T PF06690_consen 16 YKVIDIIKEIAEKKANAIKYWLEGEEF-----KQALIFGA 50 (252)
T ss_pred cchHHHHHHHHHHHHHHHHHHhccccc-----ceEEEEEE
Confidence 468999999999999999876654221 35778875
No 73
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=21.68 E-value=2.4e+02 Score=22.94 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=26.0
Q ss_pred hhhccccCCCCCCeEEEecCCHHH--------------HHHHHhcCCce-EEEcCC
Q 027128 20 QSLGNMEASATPVKIILGSSSMPR--------------RKILAEMGYEF-SVMAAD 60 (228)
Q Consensus 20 ~~~~~~~~~~~~~~iILAS~SprR--------------~~lL~~~gi~f-~v~~s~ 60 (228)
..|..+.. ..+++.++|+.+.. ..+|+.+|+.+ .++.++
T Consensus 49 e~L~~Lk~--~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~ 102 (166)
T TIGR01664 49 AKLQELDD--EGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH 102 (166)
T ss_pred HHHHHHHH--CCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 44444422 46799999988763 57899999986 344444
No 74
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=21.66 E-value=3e+02 Score=26.84 Aligned_cols=113 Identities=13% Similarity=0.129 Sum_probs=67.9
Q ss_pred CeEEEecCC------HHHHHHHHhcCCceEEEcCCCCCCCCCCC--------CHHHHHHHHHHHH-HHHHHHhhcccccc
Q 027128 32 VKIILGSSS------MPRRKILAEMGYEFSVMAADIDEKSIRKE--------KPEDLVMAIAEAK-AAAIISKLQITDSQ 96 (228)
Q Consensus 32 ~~iILAS~S------prR~~lL~~~gi~f~v~~s~iDE~~~~~~--------~p~~~v~~lA~~K-A~~v~~~~~~~~~~ 96 (228)
.+|-.|--. |-=.++|+.+|-+....+|=-||...++. =|+-++.+|+..+ ++.-..+.......
T Consensus 246 ~rIAVA~D~AF~FyY~~nl~~Lr~~GAelv~FSPL~D~~lP~~~D~vYlgGGYPElfA~~L~~n~~~~~~i~~~~~~G~p 325 (451)
T COG1797 246 VRIAVARDAAFNFYYPENLELLREAGAELVFFSPLADEELPPDVDAVYLGGGYPELFAEELSANESMRRAIKAFAAAGKP 325 (451)
T ss_pred ceEEEEecchhccccHHHHHHHHHCCCEEEEeCCcCCCCCCCCCCEEEeCCCChHHHHHHHhhCHHHHHHHHHHHHcCCc
Confidence 467777665 45678999999988888888888766433 3999999999887 33333333222111
Q ss_pred cCCCcceEEEEcceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEE
Q 027128 97 LGNVKQTILIVADTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVS 144 (228)
Q Consensus 97 ~~~~~~~~vI~aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T 144 (228)
...+..-+.-=+.++...+|+..+=--=..-+.+|-+++.+--....+
T Consensus 326 iyaECGGlMYL~~~le~~~G~~~~M~Gvlp~~~~m~~Rl~~lGY~~~~ 373 (451)
T COG1797 326 IYAECGGLMYLGESLEDADGDTYEMVGVLPGSTRMTKRLQALGYREAE 373 (451)
T ss_pred eEEecccceeehhheeccCCceeeeeeeeccchhhhhhhhccceeEEE
Confidence 111234455557777777776554333333455666666544433333
No 75
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=21.06 E-value=71 Score=23.68 Aligned_cols=17 Identities=29% Similarity=0.571 Sum_probs=14.3
Q ss_pred HHHHHHHHHHccCCcEE
Q 027128 125 REEARRFIKDYSGGQCA 141 (228)
Q Consensus 125 ~eeA~~~L~~lsG~~h~ 141 (228)
++.|.++.+++||-+|-
T Consensus 21 rdAAlQfVRKlSGtT~P 37 (88)
T COG5552 21 RDAALQFVRKLSGTTHP 37 (88)
T ss_pred HHHHHHHHHHhcCCCCc
Confidence 35688999999999984
No 76
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=20.54 E-value=1.3e+02 Score=25.62 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=29.4
Q ss_pred EEEcceEEEECCEEecCCCCHHHHHHHHHHccCCcEEEEE
Q 027128 105 LIVADTVVVYEGVIREKPSSREEARRFIKDYSGGQCATVS 144 (228)
Q Consensus 105 vI~aDTvV~~dg~IlgKP~d~eeA~~~L~~lsG~~h~v~T 144 (228)
+|+-|-+|+.=|..--+--+..+|.+.|++|.|+.|-|..
T Consensus 42 tv~p~D~lwhLGDl~~~~n~~~~a~~IlerLnGrkhlv~G 81 (186)
T COG4186 42 TVGPDDVLWHLGDLSSGANRERAAGLILERLNGRKHLVPG 81 (186)
T ss_pred cCCccceEEEecccccccchhhHHHHHHHHcCCcEEEeeC
Confidence 5677777766555444555588999999999999987643
No 77
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=20.06 E-value=3.1e+02 Score=24.96 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=48.4
Q ss_pred cCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHHHhhcccccccCCCcceEEEEcceEEEECCEEe
Q 027128 50 MGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAK----------AAAIISKLQITDSQLGNVKQTILIVADTVVVYEGVIR 119 (228)
Q Consensus 50 ~gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~K----------A~~v~~~~~~~~~~~~~~~~~~vI~aDTvV~~dg~Il 119 (228)
.|-.|.|+.. |..... .-...+..|++.. +-.+..+ -+.+++|||.| ..||-++
T Consensus 143 ~~k~~~V~v~---EsrP~~-~G~~~a~~L~~~GI~vtlI~Dsav~~~m~~-----------vd~VivGAd~v-~~nG~v~ 206 (310)
T PRK08535 143 QGKDIEVIAT---ETRPRN-QGHITAKELAEYGIPVTLIVDSAVRYFMKD-----------VDKVVVGADAI-TANGAVI 206 (310)
T ss_pred CCCeEEEEEe---cCCchh-hHHHHHHHHHHCCCCEEEEehhHHHHHHHh-----------CCEEEECccEE-ecCCCEE
Confidence 4778887743 543322 2255666666543 1122222 35799999997 5688899
Q ss_pred cCCCCHHHHHHHHHHccCCcEEEEEe
Q 027128 120 EKPSSREEARRFIKDYSGGQCATVSS 145 (228)
Q Consensus 120 gKP~d~eeA~~~L~~lsG~~h~v~T~ 145 (228)
+|--+..=| ++.+..|....|.+.
T Consensus 207 nkiGT~~~A--~~Ak~~~vPv~V~a~ 230 (310)
T PRK08535 207 NKIGTSQIA--LAAHEARVPFMVAAE 230 (310)
T ss_pred eHHhHHHHH--HHHHHhCCCEEEecc
Confidence 998877644 466667777666544
No 78
>PF08373 RAP: RAP domain; InterPro: IPR013584 The ~60-residue RAP (an acronym for RNA-binding domain abundant in Apicomplexans) domain is found in various proteins in eukaryotes. It is particularly abundant in apicomplexans and might mediate a range of cellular functions through its potential interactions with RNA []. The RAP domain consists of multiple blocks of charged and aromatics residues and is predicted to be composed of alpha helical and beta strand structures. Two predicted loop regions that are dominated by glycine and tryptophan residues are found before and after the central beta sheet []. Some proteins known to contain a RAP domain are listed below: Human hypothetical protein MGC5297, Mammalian FAST kinase domain-containing proteins (FASTKDs), Chlamydomonas reinhardtii chloroplastic trans-splicing factor Raa3.
Probab=20.03 E-value=79 Score=20.86 Aligned_cols=21 Identities=19% Similarity=0.419 Sum_probs=16.1
Q ss_pred cCCHHHHHHHHhcCCceEEEc
Q 027128 38 SSSMPRRKILAEMGYEFSVMA 58 (228)
Q Consensus 38 S~SprR~~lL~~~gi~f~v~~ 58 (228)
.++.-|.++|+.+|..+..+|
T Consensus 18 g~t~lk~r~L~~~G~~Vi~Ip 38 (58)
T PF08373_consen 18 GSTKLKHRHLKALGYKVISIP 38 (58)
T ss_pred hHHHHHHHHHHHCCCEEEEec
Confidence 677889999999996654443
Done!