BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027129
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 309 bits (791), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 178/230 (77%), Gaps = 10/230 (4%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKN 58
+ ++I N + K PP KF + RIL+TGGAGF+GSHL DKLM + +
Sbjct: 63 LREKIQNLERSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLM-MDGH 114
Query: 59 EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+
Sbjct: 115 EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI 174
Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDE
Sbjct: 175 KTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDE 234
Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR 228
GKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++
Sbjct: 235 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ 284
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 308 bits (788), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIR 228
+DGRVVSNFI QA++
Sbjct: 269 NDGRVVSNFILQALQ 283
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 307 bits (787), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIR 228
+DGRVVSNFI QA++
Sbjct: 269 NDGRVVSNFILQALQ 283
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 307 bits (787), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIR 228
+DGRVVSNFI QA++
Sbjct: 269 NDGRVVSNFILQALQ 283
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 307 bits (786), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIR 228
+DGRVVSNFI QA++
Sbjct: 269 NDGRVVSNFILQALQ 283
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 304 bits (779), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 142/195 (72%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 88 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 146
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 147 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 206
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+G RM++
Sbjct: 207 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHM 266
Query: 214 DDGRVVSNFIAQAIR 228
+DGRVVSNFI QA++
Sbjct: 267 NDGRVVSNFILQALQ 281
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 20/203 (9%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
ILVTGGAGFIGSH+VDKL+EN +VI++DN TG+K+N+ +P+ E + D+ +
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNY-DVIILDNLTTGNKNNI-----NPKAEFVNADIRDKD 55
Query: 95 LIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTS 146
L E V+ + H A + NPV NV+GT+N+L + ++ + + +S
Sbjct: 56 LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASS 115
Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
VYG+P P DE++ PI S Y K V E + Y+R +GIE I R N
Sbjct: 116 GGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 207 YGPRMN-IDDGRVVSNFIAQAIR 228
YG R + + V+S FI + ++
Sbjct: 171 YGERQDPKGEAGVISIFIDKMLK 193
>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044
/ CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNY-FTGSKDNLRKWIGHPRFEL 85
M+ILVTGGAGFIGSH V L+ + +V VVD + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 86 IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 138
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
G R L ST EVYG D W +P+ S Y K ++ L YH+ HG+++
Sbjct: 121 G-RFLHVSTDEVYGS-----IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174
Query: 199 RIARIFNTYGPR 210
+ R N YGPR
Sbjct: 175 VVTRCSNNYGPR 186
>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1
SV=1
Length = 328
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY----FTGSKDNLRKWIGHPRFELIRHDV 90
+LVTG AGFIGS V L+ +VV + G+ DNL GHPR+ R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 91 TEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
+ ++ DQ+ HLA + + ++TNV GT +L A R G A +
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYG + W P+ S Y K + L +H HG+++R+ R N
Sbjct: 125 STDEVYGS-----LEHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 206 TYGPRM 211
YGPR
Sbjct: 180 NYGPRQ 185
>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3
SV=1
Length = 672
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ +++ E+ +D S D + +++G PRF
Sbjct: 315 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 370
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 371 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 430
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+
Sbjct: 431 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 489
Query: 197 EIRIARIFNTYGPRMN-IDDGRVVSN 221
+ R FN GPR++ +D R+ S+
Sbjct: 490 RFTLFRPFNWMGPRLDTLDAARIGSS 515
>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=arnA PE=3 SV=1
Length = 673
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ +++ E+ +D S D + +++G PRF
Sbjct: 316 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 371
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 372 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 431
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+
Sbjct: 432 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 490
Query: 197 EIRIARIFNTYGPRMN-IDDGRVVSN 221
+ R FN GPR++ +D R+ S+
Sbjct: 491 RFTLFRPFNWMGPRLDTLDAARIGSS 516
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ EV +D GS + ++IGHP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLQDGGYEVYGLD---IGSS-AVDRFIGHPNFHFVEGDISIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPST 434
Query: 148 SEVYGDPLVHPQDE-SYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG H DE S V PI R Y K++ + +++ Y ++ G+ + R FN
Sbjct: 435 SEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFN 494
Query: 206 TYGPRMN-IDDGRVVSN 221
GPR++ +D R+ S+
Sbjct: 495 WMGPRLDSLDSARIGSS 511
>sp|A4SQW9|ARNA_AERS4 Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
salmonicida (strain A449) GN=arnA PE=3 SV=1
Length = 663
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 15/198 (7%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ + E+ +D S L ++I HP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLKDGRYEIYGLDI----SASALGRFIDHPHFHFVEGDISIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 434
Query: 148 SEVYG--DPLVHPQDESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +DES V PI R Y K++ + +++ Y ++ G+ + R F
Sbjct: 435 SEVYGMCDDHSFDEDESRL-IVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPF 493
Query: 205 NTYGPRMN-IDDGRVVSN 221
N GPR++ +D R+ S+
Sbjct: 494 NWMGPRLDSLDSARIGSS 511
>sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia
proteamaculans (strain 568) GN=arnA PE=3 SV=1
Length = 660
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 15/198 (7%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ +++ ++ +D GS D + +++G+PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDRYDIYGLD---IGS-DAISRFLGNPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +D S V PI R Y K++ + +++ Y + G++ + R F
Sbjct: 433 SEVYGMCDDKEFDEDHSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPF 491
Query: 205 NTYGPRM-NIDDGRVVSN 221
N GPR+ N+D R+ S+
Sbjct: 492 NWMGPRLDNLDAARIGSS 509
>sp|B1JJ30|ARNA_YERPY Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA
PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q93PD8|ARNA_YERPS Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=arnA
PE=2 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|B2K5L3|ARNA_YERPB Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=arnA
PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|A7FHH4|ARNA_YERP3 Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=arnA PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|A4TIM4|ARNA_YERPP Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
(strain Pestoides F) GN=arnA PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q1CIH7|ARNA_YERPN Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=arnA PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|A9R093|ARNA_YERPG Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Angola) GN=arnA PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q8ZDX8|ARNA_YERPE Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
GN=arnA PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q1C742|ARNA_YERPA Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=arnA PE=3 SV=1
Length = 667
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRVVSN 221
+ + R FN GPR+ N+D R+ S+
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|O06329|RMLB_MYCTU dTDP-glucose 4,6-dehydratase OS=Mycobacterium tuberculosis GN=rmlB
PE=1 SV=1
Length = 331
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGHPRFELIRHDV 90
MR+LVTGGAGFIG++ V + ++ + V + T G +++L L++ D+
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLAD--VEDAIRLVQGDI 58
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T+ L+ E D + H A + NP + TNVIGT +L +R G R+
Sbjct: 59 TDAELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHI 118
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYGD + D + + P S Y K A+ L+ + R +G+ I+ N
Sbjct: 119 STDEVYGD--LELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSN 176
Query: 206 TYGPRMNID 214
YGP +++
Sbjct: 177 NYGPYQHVE 185
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
MR LVTG AGFIGS LVD+L+ + + V+ +D+ +G +NL +FE ++ D+ +
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLA-DGHGVVGLDDLSSGRAENLHSAENSDKFEFVKADIVD 59
Query: 93 P----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
LL E + I+HLA S +P NV+GT+ + A+ G R ++ +
Sbjct: 60 ADLTGLLAEFKPEVIFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRKVVHT 119
Query: 147 TS--EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
+S VYG P +P E P+ S Y GK E + Y + ++
Sbjct: 120 SSGGSVYGTPPAYPTSEDM-----PVNPASPYAAGKVAGEVYLNMYRNLYDLDCSHIAPA 174
Query: 205 NTYGPRMN 212
N YGPR +
Sbjct: 175 NVYGPRQD 182
>sp|B7LM76|ARNA_ESCF3 Bifunctional polymyxin resistance protein ArnA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=arnA PE=3 SV=1
Length = 660
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 13/201 (6%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D
Sbjct: 313 QRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLTHPNFHFVEGD 368
Query: 90 VT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
++ E + + D + L A+PI Y NP++ + + L ++ + RI+
Sbjct: 369 ISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVQYHKRII 428
Query: 144 LTSTSEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
STSEVYG DE + V PI R Y K++ + +++ Y + G++ +
Sbjct: 429 FPSTSEVYGMCTDKFFDEDHSNLIVGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 202 RIFNTYGPRM-NIDDGRVVSN 221
R FN GPR+ N++ R+ S+
Sbjct: 489 RPFNWMGPRLDNLNAARIGSS 509
>sp|A0QSK6|RMLB_MYCS2 dTDP-glucose 4,6-dehydratase OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=rmlB PE=1 SV=1
Length = 331
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 33 MRILVTGGAGFIGSHLVD-KLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
MR+LVTGGAGFIG++ V L E + + V+D + GS+++L R L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVAD--RIRLVQGDI 58
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T+ L+ E D + H A +P + +NV+GT +L +R R+
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYGD + + + + P S Y K A+ L+ + R +G+ I+ N
Sbjct: 119 STDEVYGD--LELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSN 176
Query: 206 TYGPRMNID 214
YGP +++
Sbjct: 177 NYGPYQHVE 185
>sp|A8FRR2|ARNA_SHESH Bifunctional polymyxin resistance protein ArnA OS=Shewanella
sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1
Length = 660
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
++L+ G GFIG+HL +L+++ K E+ +D S + + + HP F + D+T
Sbjct: 319 KVLIMGANGFIGNHLTKRLLDDGKYEIYAMDM----SSSQIEQHLSHPDFHFVEGDITIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 NEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFPST 434
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV------RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
SEVYG DE + + +P+ R Y K++ + +++ Y ++ ++ +
Sbjct: 435 SEVYG----MCTDEEFDEDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFTLF 490
Query: 202 RIFNTYGPRMN-IDDGRVVSN 221
R FN GPR++ ++ RV S+
Sbjct: 491 RPFNWMGPRLDSLNSARVGSS 511
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ ++ +D GS + ++IG+PRF I DV+
Sbjct: 317 RVLILGVNGFIGNHLTERLLKDGNYDIYGMD---IGSS-AIERFIGNPRFHFIEGDVSIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +D S V PI R Y K++ + +++ Y + G++ + R F
Sbjct: 433 SEVYGMCDDKEFDEDNSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPF 491
Query: 205 NTYGPRM-NIDDGRVVSN 221
N GPR+ N++ R+ S+
Sbjct: 492 NWMGPRLDNLNSARIGSS 509
>sp|B2VBI9|ARNA_ERWT9 Bifunctional polymyxin resistance protein ArnA OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3
SV=1
Length = 660
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ ++ EV +D GS D + ++IGH RF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLVDDNFEVFGLD---IGS-DAIGRFIGHERFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPST 432
Query: 148 SEVYGDPLVHPQDE-SYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE S V PI R Y K++ + +++ Y + G+ + R FN
Sbjct: 433 SEVYGMCTDASFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|A4WAM3|ARNA_ENT38 Bifunctional polymyxin resistance protein ArnA OS=Enterobacter sp.
(strain 638) GN=arnA PE=3 SV=1
Length = 660
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ EV +D GS D + ++IG+ RF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNFEVYGLD---IGS-DAISRFIGNSRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG V +D S V PI R Y K++ + +++ Y + G+ + R F
Sbjct: 433 SEVYGMCSDKVFDEDHSNL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPF 491
Query: 205 NTYGPRM-NIDDGRVVSN 221
N GPR+ N++ R+ S+
Sbjct: 492 NWMGPRLDNLNAARIGSS 509
>sp|P77398|ARNA_ECOLI Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12) GN=arnA PE=1 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B1IXT2|ARNA_ECOLC Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B1X8W8|ARNA_ECODH Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / DH10B) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|C4ZU97|ARNA_ECOBW Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|Q1R9G0|ARNA_ECOUT Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain UTI89 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|A1ADA7|ARNA_ECOK1 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O1:K1 / APEC GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B7MG22|ARNA_ECO45 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B1LLK9|ARNA_ECOSM Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B7NNT4|ARNA_ECO7I Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|Q8Z540|ARNA_SALTI Bifunctional polymyxin resistance protein ArnA OS=Salmonella typhi
GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
R Y K++ + +++ Y + G+ + R FN GPR++
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
>sp|B5BCP6|ARNA_SALPK Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
R Y K++ + +++ Y + G+ + R FN GPR++
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
>sp|Q5PNA6|ARNA_SALPA Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=arnA PE=3
SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
R Y K++ + +++ Y + G+ + R FN GPR++
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
>sp|Q3YZV1|ARNA_SHISS Bifunctional polymyxin resistance protein ArnA OS=Shigella sonnei
(strain Ss046) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B6I7J8|ARNA_ECOSE Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain SE11) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|A8A2C2|ARNA_ECOHS Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O9:H4 (strain HS) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B7M5T7|ARNA_ECO8A Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O8 (strain IAI1) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|B7LAS0|ARNA_ECO55 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain 55989 / EAEC) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|A7ZP73|ARNA_ECO24 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
>sp|Q31YK2|ARNA_SHIBS Bifunctional polymyxin resistance protein ArnA OS=Shigella boydii
serotype 4 (strain Sb227) GN=arnA PE=3 SV=1
Length = 660
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN-VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRM-NIDDGRVVSN 221
GPR+ N++ R+ S+
Sbjct: 493 WMGPRLDNLNAARIGSS 509
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,885,982
Number of Sequences: 539616
Number of extensions: 3988523
Number of successful extensions: 11592
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 10851
Number of HSP's gapped (non-prelim): 582
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)