Query 027130
Match_columns 227
No_of_seqs 158 out of 764
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 08:27:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 1.3E-47 4.5E-52 317.6 14.9 148 11-159 2-161 (169)
2 2ast_A S-phase kinase-associat 100.0 1.3E-43 4.4E-48 290.3 13.3 142 17-159 2-154 (159)
3 2p1m_A SKP1-like protein 1A; F 100.0 2.3E-45 7.7E-50 301.4 2.6 140 15-159 3-153 (160)
4 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 2.6E-43 8.9E-48 283.6 12.5 130 16-151 2-141 (141)
5 1hv2_A Elongin C, ELC1; protei 99.9 3.5E-27 1.2E-31 179.1 5.5 96 13-116 1-99 (99)
6 2fnj_C Transcription elongatio 99.9 4.9E-27 1.7E-31 177.3 5.7 95 16-116 1-96 (96)
7 1vcb_B Protein (elongin C); tu 99.9 9.1E-27 3.1E-31 180.7 6.3 96 15-116 16-112 (112)
8 4ajy_C Transcription elongatio 99.9 2.2E-24 7.5E-29 162.7 6.5 94 17-116 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 99.0 3.4E-09 1.2E-13 79.2 10.5 97 15-130 8-108 (109)
10 2yy9_A Zinc finger and BTB dom 99.0 6.6E-10 2.3E-14 87.1 5.9 100 15-137 25-125 (135)
11 2if5_A Zinc finger and BTB dom 98.9 2.1E-08 7.1E-13 76.3 11.4 94 15-127 25-119 (120)
12 1buo_A POZ domain, protein (pr 98.9 1.4E-08 4.9E-13 77.7 10.1 93 15-131 28-121 (121)
13 3htm_A Speckle-type POZ protei 98.8 2.2E-08 7.7E-13 80.1 11.0 105 15-138 34-139 (172)
14 1r29_A B-cell lymphoma 6 prote 98.8 3.8E-08 1.3E-12 75.7 10.5 95 15-129 29-125 (127)
15 2q81_A MIZ-1 protein; BTB/POZ 98.8 3.7E-08 1.3E-12 75.2 9.9 90 15-128 27-117 (119)
16 2vpk_A Myoneurin; transcriptio 98.8 6.3E-08 2.2E-12 73.3 10.8 93 15-128 22-115 (116)
17 3b84_A Zinc finger and BTB dom 98.8 2.1E-08 7.2E-13 76.6 8.1 92 15-129 24-116 (119)
18 3hve_A Gigaxonin; ubiquitin, c 98.7 4.8E-08 1.6E-12 83.6 10.1 100 15-132 31-132 (256)
19 2ppi_A Gigaxonin; BTB domain, 98.7 4E-08 1.4E-12 77.8 8.8 95 15-127 47-143 (144)
20 4eoz_A Speckle-type POZ protei 98.7 1.4E-08 4.9E-13 79.1 5.9 102 15-135 25-127 (145)
21 3ga1_A Nucleus accumbens-assoc 98.7 2.2E-08 7.6E-13 77.4 6.9 93 15-129 33-126 (129)
22 2z8h_A Transcription regulator 98.7 5.2E-08 1.8E-12 76.2 8.5 97 15-131 36-133 (138)
23 3i3n_A Kelch-like protein 11; 98.6 7.3E-08 2.5E-12 83.6 8.4 108 15-139 32-147 (279)
24 3ohu_A Transcription regulator 98.6 2.1E-08 7.3E-13 76.9 3.3 91 15-126 32-124 (125)
25 3hqi_A Speckle-type POZ protei 98.5 5.5E-07 1.9E-11 79.0 10.7 103 15-136 174-277 (312)
26 3m5b_A Zinc finger and BTB dom 98.5 1.2E-07 3.9E-12 73.0 5.5 87 15-129 30-117 (119)
27 2ihc_A Transcription regulator 98.5 9.4E-08 3.2E-12 73.4 4.2 93 15-127 29-122 (124)
28 3fkc_A Transcriptional regulat 98.4 7.9E-07 2.7E-11 67.7 7.4 84 15-121 31-115 (116)
29 3drz_A BTB/POZ domain-containi 88.1 2.2 7.6E-05 31.4 7.7 96 16-129 6-106 (107)
30 3drx_A BTB/POZ domain-containi 70.0 5.9 0.0002 32.9 4.9 98 15-130 11-113 (202)
31 1s1g_A Potassium voltage-gated 64.5 7.6 0.00026 29.5 4.3 92 15-126 12-107 (124)
32 1su0_B NIFU like protein ISCU; 45.7 42 0.0014 26.4 5.9 74 107-180 54-137 (159)
33 1m46_B IQ4, IQ4 motif from MYO 42.6 32 0.0011 18.7 3.2 21 167-187 3-23 (26)
34 1wgx_A KIAA1903 protein; MYB D 36.8 19 0.00065 25.0 2.2 40 101-144 15-54 (73)
35 2cqq_A RSGI RUH-037, DNAJ homo 33.2 27 0.00091 23.9 2.5 19 125-144 35-53 (72)
36 2qq4_A Iron-sulfur cluster bio 33.0 1E+02 0.0036 23.3 6.2 67 107-173 53-128 (138)
37 2dim_A Cell division cycle 5-l 32.3 20 0.00068 23.9 1.7 31 124-154 32-69 (70)
38 4eef_G F-HB80.4, designed hema 31.0 11 0.00038 26.3 0.2 46 98-147 24-69 (74)
39 3mkl_A HTH-type transcriptiona 29.9 1.5E+02 0.0051 21.0 7.1 80 63-147 3-85 (120)
40 2nz0_B Potassium voltage-gated 28.8 22 0.00077 27.4 1.6 91 16-126 35-129 (140)
41 2k9n_A MYB24; R2R3 domain, DNA 27.4 36 0.0012 24.5 2.5 36 124-159 24-66 (107)
42 3lvl_A NIFU-like protein; prot 26.6 50 0.0017 24.9 3.3 38 107-144 53-91 (129)
43 3g5o_A Uncharacterized protein 26.4 98 0.0033 22.5 4.8 49 99-147 47-97 (108)
44 1nn7_A Potassium channel KV4.2 25.5 23 0.00079 25.8 1.1 85 24-126 7-94 (105)
45 1x41_A Transcriptional adaptor 25.3 47 0.0016 21.4 2.5 21 124-144 31-51 (60)
46 1xjs_A NIFU-like protein; SR17 25.2 58 0.002 25.1 3.5 67 107-173 55-131 (147)
47 3htm_A Speckle-type POZ protei 24.3 63 0.0021 24.3 3.5 60 66-130 102-163 (172)
48 2jsp_A Transcriptional regulat 23.5 32 0.0011 24.7 1.5 18 133-150 43-60 (87)
49 2cjj_A Radialis; plant develop 23.2 42 0.0014 24.1 2.1 21 124-144 34-54 (93)
50 2yus_A SWI/SNF-related matrix- 23.0 54 0.0019 22.6 2.6 22 124-145 40-61 (79)
51 2xf7_A GP23.1; viral protein; 22.0 35 0.0012 21.6 1.3 35 127-166 11-46 (51)
52 1gv2_A C-MYB, MYB proto-oncoge 22.0 34 0.0012 24.4 1.4 35 124-158 27-68 (105)
53 2f6h_X Myosin-2, type V myosin 21.3 96 0.0033 28.0 4.6 44 101-144 282-325 (419)
54 1ug2_A 2610100B20RIK gene prod 20.9 56 0.0019 23.8 2.3 19 125-143 59-77 (95)
55 2eqr_A N-COR1, N-COR, nuclear 20.5 52 0.0018 21.4 2.0 20 125-144 35-54 (61)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=1.3e-47 Score=317.63 Aligned_cols=148 Identities=26% Similarity=0.472 Sum_probs=128.8
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCCC---CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC---
Q 027130 11 PEMMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG---SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS--- 84 (227)
Q Consensus 11 pe~~~~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~~---~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~--- 84 (227)
|.|++++|+|+|+||++|.|++++|++|++|++|+.+.+.. .....+|||| +|++.+|++|++||+||+.++.
T Consensus 2 ~~m~~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 2 AHMVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp ----CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCCCCCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccc
Confidence 45667899999999999999999999999999999876541 1123789999 9999999999999999998642
Q ss_pred ------CccccchhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCChhhhhccc
Q 027130 85 ------SNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158 (227)
Q Consensus 85 ------s~~~i~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~I~~D~T~EEe~e~~ 158 (227)
....+++||++|+++|.+.||+||.|||||+|++|+++||++||++|+||||+|||++|||+|||||||+++++
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir 160 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIR 160 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 23468999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred c
Q 027130 159 K 159 (227)
Q Consensus 159 ~ 159 (227)
+
T Consensus 161 ~ 161 (169)
T 3v7d_A 161 R 161 (169)
T ss_dssp T
T ss_pred H
Confidence 4
No 2
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=1.3e-43 Score=290.28 Aligned_cols=142 Identities=35% Similarity=0.573 Sum_probs=127.4
Q ss_pred cEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC----------C
Q 027130 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (227)
Q Consensus 17 ~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~~-~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~----------s 85 (227)
.|+|+|+||+.|.|++.+|.+|++|++|+.+.|+. ++...+|||| +|++.+|++|++||+||+.++. .
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 48999999999999999999999999999875654 3445789999 9999999999999999997642 2
Q ss_pred ccccchhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCChhhhhcccc
Q 027130 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLK 159 (227)
Q Consensus 86 ~~~i~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~I~~D~T~EEe~e~~~ 159 (227)
...+++||++|++++.++|++|+.|||||+|++|+++||++||++|+||||+|||++|||++||||||++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~ 154 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 154 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999774
No 3
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=2.3e-45 Score=301.40 Aligned_cols=140 Identities=35% Similarity=0.581 Sum_probs=81.4
Q ss_pred CccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCC-----------
Q 027130 15 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG----------- 83 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~----------- 83 (227)
+++|+|+|+||+.|.|++.+|++|++|++|+.+.+ ...+|||| +|++.+|++|++||+||+.++
T Consensus 3 ~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 77 (160)
T 2p1m_A 3 AKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEGAA 77 (160)
T ss_dssp -----CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC-------------------
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 56899999999999999999999999999998643 25689999 999999999999999999753
Q ss_pred CCccccchhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCChhhhhcccc
Q 027130 84 SSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLK 159 (227)
Q Consensus 84 ~s~~~i~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~I~~D~T~EEe~e~~~ 159 (227)
.....+++||++|++++.+.||+|+.|||||+|++|+++||++||++|+||||+|||++|||++||||||++++++
T Consensus 78 ~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~ 153 (160)
T 2p1m_A 78 TSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRR 153 (160)
T ss_dssp -----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHH
T ss_pred cccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 1235689999999999999999999999999999999999999999999999999999999999999999999773
No 4
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=2.6e-43 Score=283.64 Aligned_cols=130 Identities=35% Similarity=0.580 Sum_probs=110.7
Q ss_pred ccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC----------C
Q 027130 16 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (227)
Q Consensus 16 ~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~----------s 85 (227)
+.|+|+|+||+.|.|++.+|++|++|++|+.+.| ..+|||| +|++.+|++|++||+||+.++. .
T Consensus 2 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 4699999999999999999999999999998754 4589999 9999999999999999997642 2
Q ss_pred ccccchhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCCh
Q 027130 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTE 151 (227)
Q Consensus 86 ~~~i~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~I~~D~T~ 151 (227)
...+++||++|++++.+.||+|+.|||||+|++|+++||++||++|+||||+|||++|||+|||||
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 356899999999999999999999999999999999999999999999999999999999999997
No 5
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.93 E-value=3.5e-27 Score=179.13 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=83.8
Q ss_pred CCCccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCC---CCcccc
Q 027130 13 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---SSNKER 89 (227)
Q Consensus 13 ~~~~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~---~s~~~i 89 (227)
|.+++|+|+|+||++|.|++++|++|++|++|+.+ ++ ++...+|||| +|++.+|++|++||+||+.++ ....++
T Consensus 1 m~~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i 77 (99)
T 1hv2_A 1 MSQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEI 77 (99)
T ss_dssp CCCSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSC
T ss_pred CCCcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccC
Confidence 45679999999999999999999999999999987 55 3345789999 999999999999999999643 223567
Q ss_pred chhhhhhccCChhHHHHHHhhhccCCc
Q 027130 90 KSFDEKFIRMDTKRLCELTSAADSLQL 116 (227)
Q Consensus 90 ~~wD~eFl~id~~~L~eLi~AA~yL~I 116 (227)
++| ++|++.||+|+.|||||+|
T Consensus 78 ~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 78 PEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred CCc-----cCCHHHHHHHHHHHHHhCc
Confidence 888 7999999999999999997
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.93 E-value=4.9e-27 Score=177.34 Aligned_cols=95 Identities=21% Similarity=0.232 Sum_probs=81.0
Q ss_pred ccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhhh
Q 027130 16 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (227)
Q Consensus 16 ~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~-~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD~ 94 (227)
.+|+|+|+||++|.|++++|++|++|++|+.+.|. .+....+|||| +|++.+|++|++||+||+.++.+..++++|
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w-- 77 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF-- 77 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC--
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc--
Confidence 37999999999999999999999999999997654 33345789999 999999999999999999765455678888
Q ss_pred hhccCChhHHHHHHhhhccCCc
Q 027130 95 KFIRMDTKRLCELTSAADSLQL 116 (227)
Q Consensus 95 eFl~id~~~L~eLi~AA~yL~I 116 (227)
++|++.||+|+.|||||+|
T Consensus 78 ---~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 ---PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp ---CCCTTTHHHHHHHHHHHTC
T ss_pred ---ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 7
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.93 E-value=9.1e-27 Score=180.72 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=82.1
Q ss_pred CccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~~-~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
+++|+|+|+||++|.|++++|++|++|++|+.+.+. .+....+|||| +|++.+|+||++||+||+.++.+..++++|
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w- 93 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF- 93 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC-
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc-
Confidence 579999999999999999999999999999987654 23234689999 999999999999999999765556678888
Q ss_pred hhhccCChhHHHHHHhhhccCCc
Q 027130 94 EKFIRMDTKRLCELTSAADSLQL 116 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I 116 (227)
++|++.||+|+.|||||+|
T Consensus 94 ----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 ----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred ----ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.90 E-value=2.2e-24 Score=162.66 Aligned_cols=94 Identities=21% Similarity=0.249 Sum_probs=80.4
Q ss_pred cEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcC-CCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhhhh
Q 027130 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKG-MGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (227)
Q Consensus 17 ~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~-~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD~e 95 (227)
+|+|+|+||++|.|++.+|.+|++|++|+.+.| ..++...+|||| +|++.+|++|++||+||+.++.++.++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 799999999999999999999999999998654 233346789999 999999999999999999776556678999
Q ss_pred hccCChhHHHHHHhhhccCCc
Q 027130 96 FIRMDTKRLCELTSAADSLQL 116 (227)
Q Consensus 96 Fl~id~~~L~eLi~AA~yL~I 116 (227)
+++++.+++|+.|||||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 5899999999999999984
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.99 E-value=3.4e-09 Score=79.21 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=79.7
Q ss_pred CccEEEEeCCC---CEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccc
Q 027130 15 KSYIWLQTADG---SIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (227)
Q Consensus 15 ~~~i~L~SsDG---~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~ 90 (227)
...++|+..+| +.|.+++.++ ..|++++.|+... ..++. ..|.+| ++++.+++.+++|++...
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~-~~e~~-~~i~l~-~~~~~~f~~~l~~iYt~~---------- 74 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD-LAEVK-SEIHIP-DVEPAAFLILLKYMYSDE---------- 74 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCC----------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC-cccCC-CeEEeC-CCCHHHHHHHHHHHcCCC----------
Confidence 46899998886 9999999995 5899999998743 33323 789999 899999999999999865
Q ss_pred hhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHH
Q 027130 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (227)
Q Consensus 91 ~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ 130 (227)
+.++.+.+.+|+.||++++++.|.+.|.+.+...
T Consensus 75 ------~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 75 ------IDLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp ------CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------ccCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 2356678899999999999999999999998764
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.97 E-value=6.6e-10 Score=87.09 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=76.5
Q ss_pred CccEEEEeCCCCEEEecHHH-HhHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...|+|+. +|+.|.+++.+ +..|++++.|+.... ...|.|| +++..+++.+++|++...
T Consensus 25 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~------------- 84 (135)
T 2yy9_A 25 YCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGH------------- 84 (135)
T ss_dssp TCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSC-------------
T ss_pred CcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCC-------------
Confidence 35788876 68999999998 568999999876421 4579999 899999999999999876
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 137 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~e 137 (227)
+.++.+.+.+|+.||++|+|+.|.+.|++++...+.|+++.
T Consensus 85 ---~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 85 ---LALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp ---CCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred ---CCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 34566779999999999999999999999999888887653
No 11
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.88 E-value=2.1e-08 Score=76.31 Aligned_cols=94 Identities=13% Similarity=0.181 Sum_probs=76.4
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|+. +|+.|.+++.++ ..|++++.|+.. +..++....|.++ ++++.+++.+++|++...
T Consensus 25 ~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~-~~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~------------- 88 (120)
T 2if5_A 25 LCDVVILV-EGREFPTHRSVLAACSQYFKKLFTS-GAVVDQQNVYEID-FVSAEALTALMDFAYTAT------------- 88 (120)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSC-------------
T ss_pred CCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcC-CccccCCceEEeC-CCCHHHHHHHHHHHcCCC-------------
Confidence 46788876 689999999995 579999999874 3333345679999 899999999999999765
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~v 127 (227)
+.++.+.+.+|+.||++|++++|.+.|.+.+
T Consensus 89 ---~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 ---LTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp ---CCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---CccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 2356678999999999999999999998865
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.86 E-value=1.4e-08 Score=77.67 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=79.0
Q ss_pred CccEEEEeCCCCEEEecHHH-HhHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|+. +|+.|.+++.+ +..|++++.|+.. ....|.++ ++++.+++.+++|++....
T Consensus 28 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------ 87 (121)
T 1buo_A 28 LCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLD-FLSPKTFQQILEYAYTATL------------ 87 (121)
T ss_dssp TCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEEC-SSCHHHHHHHHHHHHHSCC------------
T ss_pred CCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeC-CCCHHHHHHHHHhhcCCCc------------
Confidence 45788876 68999999999 4689999999863 24578998 8999999999999998662
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~i 131 (227)
.++.+.+.+|+.||++|+++.|.+.|++.+..+|
T Consensus 88 ----~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 88 ----QAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ----CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ----CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 3556779999999999999999999999987754
No 13
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.84 E-value=2.2e-08 Score=80.15 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=84.0
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|+. +|+.|.+++.++ ..|++++.|+... ..+.....|.|| ++++.+++.+++|++....
T Consensus 34 ~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~------------ 98 (172)
T 3htm_A 34 FTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKA------------ 98 (172)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEEC-SSCHHHHHHHHHHHHHSCC------------
T ss_pred CcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEec-CCCHHHHHHHHHHHhCCCC------------
Confidence 35688877 689999999995 6799999998853 333335689999 8999999999999998762
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEE 138 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eE 138 (227)
.++.+.+.+|+.+|++|+++.|.+.|.+.+...+...+.-+
T Consensus 99 ----~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~ 139 (172)
T 3htm_A 99 ----PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAE 139 (172)
T ss_dssp ----TTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHH
T ss_pred ----CCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHH
Confidence 34556788999999999999999999999987554444433
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.80 E-value=3.8e-08 Score=75.69 Aligned_cols=95 Identities=15% Similarity=0.250 Sum_probs=78.6
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCccccc-CCCCCHHHHHHHHHHHHhcCCCCCCccccchh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISL-PQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpL-p~~Vss~iL~kIieyc~~h~~~~~s~~~i~~w 92 (227)
...|+|.. +|+.|.+++.++ ..|++++.|+... ..+ ....|.| + ++++.+++.+++|++...
T Consensus 29 ~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~-~~e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~------------ 92 (127)
T 1r29_A 29 LTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQ-LKR-NLSVINLDP-EINPEGFNILLDFMYTSR------------ 92 (127)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTST-TTT-TCSEEECCT-TSCHHHHHHHHHHHHHSC------------
T ss_pred CCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCC-ccC-CCCEEEeCC-CCCHHHHHHHHHHHcCCC------------
Confidence 45788876 589999999995 6899999998753 222 4567889 7 899999999999999765
Q ss_pred hhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHH
Q 027130 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (227)
Q Consensus 93 D~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~ 129 (227)
+.++.+.+.+|+.||++|+++.|.+.|.+.+..
T Consensus 93 ----~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 93 ----LNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp ----CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ----cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 235667899999999999999999999988753
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.78 E-value=3.7e-08 Score=75.24 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=76.3
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...|+|+. +|+.|.+++.++ ..|++++.|+... ...|.++ .+++.+++.+++|++...
T Consensus 27 ~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~------------- 85 (119)
T 2q81_A 27 LCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAK------------- 85 (119)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSC-------------
T ss_pred CcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCC-------------
Confidence 45788875 689999999995 5799999999852 4578898 899999999999999866
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA 128 (227)
+.++.+.+.+|+.||++|+|+.|.+.|+++++
T Consensus 86 ---~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 86 ---LSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 23556679999999999999999999998874
No 16
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.77 E-value=6.3e-08 Score=73.28 Aligned_cols=93 Identities=13% Similarity=0.127 Sum_probs=75.1
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...|+|+. +|+.|.+++.++ ..|++++.|+...+ ...-.|++| ++++.+++.+++|++...
T Consensus 22 ~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~------------- 83 (116)
T 2vpk_A 22 LCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGT------------- 83 (116)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSC-------------
T ss_pred CCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCC-------------
Confidence 45788876 589999999995 68999999987541 122335666 799999999999999865
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA 128 (227)
+.++.+.+.+|+.||++|+++.|.+.|++.+.
T Consensus 84 ---~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 84 ---LNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ---CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ---cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 23556789999999999999999999998763
No 17
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.77 E-value=2.1e-08 Score=76.60 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=75.9
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|+. +|+.|.+++.++ ..|++++.|+... . ...|.|| ++++.+++.+++|++...
T Consensus 24 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-~----~~~i~l~-~~~~~~f~~ll~~iYtg~------------- 83 (119)
T 3b84_A 24 YCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDG-S----GGSVVLP-AGFAEIFGLLLDFFYTGH------------- 83 (119)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTT-T----CCCEEEC-GGGHHHHHHHHHHHHHSC-------------
T ss_pred CcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCC-C----CCeEEeC-CCCHHHHHHHHHHHcCCC-------------
Confidence 45788875 689999999994 5799999998752 2 5679999 899999999999999865
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~ 129 (227)
+.++.+.+.+|+.||++|+++.|.+.|++.+..
T Consensus 84 ---~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 84 ---LALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp ---CCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred ---CccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 235566789999999999999999999987653
No 18
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.73 E-value=4.8e-08 Score=83.63 Aligned_cols=100 Identities=25% Similarity=0.291 Sum_probs=77.1
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~-~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~w 92 (227)
...|+|.. +|+.|.+++.++ ..|++++.|+..... .++....|.+| ++++.+++.+++|++...
T Consensus 31 ~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~------------ 96 (256)
T 3hve_A 31 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQ------------ 96 (256)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSC------------
T ss_pred CcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCC------------
Confidence 45788876 689999999995 479999999864321 12245679999 899999999999999866
Q ss_pred hhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHh
Q 027130 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIE 132 (227)
Q Consensus 93 D~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ik 132 (227)
+.++.+.+.+|+.||++|+++.|.+.|++++...+.
T Consensus 97 ----~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~ 132 (256)
T 3hve_A 97 ----IRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIA 132 (256)
T ss_dssp ----CCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCC
T ss_pred ----CcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCC
Confidence 235667799999999999999999999999987543
No 19
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.73 E-value=4e-08 Score=77.77 Aligned_cols=95 Identities=25% Similarity=0.296 Sum_probs=76.3
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~-~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~w 92 (227)
...|+|+. +|+.|.+++.++ ..|++++.|+...... ++....|.|+ ++++.+++.+++|++.-.
T Consensus 47 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~------------ 112 (144)
T 2ppi_A 47 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQ------------ 112 (144)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSC------------
T ss_pred CcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCC------------
Confidence 35788876 689999999995 5899999999753221 1245679999 899999999999998655
Q ss_pred hhhhccCChhHHHHHHhhhccCCcchHHHHHHHHH
Q 027130 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (227)
Q Consensus 93 D~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~v 127 (227)
+.++.+.+.+|+.||++|+++.|.+.|++++
T Consensus 113 ----~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 113 ----IRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ----CCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 2356678999999999999999999998754
No 20
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.72 E-value=1.4e-08 Score=79.10 Aligned_cols=102 Identities=18% Similarity=0.172 Sum_probs=76.4
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|+. +|+.|.+++.++ ..|++++.|+... ..++....|.+| ++++.+++.+++|++....
T Consensus 25 ~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~------------ 89 (145)
T 4eoz_A 25 FTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKA------------ 89 (145)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEEC-SSCHHHHHHHHHHHHHSCC------------
T ss_pred CcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEec-CCCHHHHHHHHHhhccCcc------------
Confidence 35788876 688999999995 6799999998742 221124679999 8999999999999998762
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCC
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKT 135 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT 135 (227)
.++.+.+.+|+.+|++++++.|.+.|++.+...+...+
T Consensus 90 ----~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 127 (145)
T 4eoz_A 90 ----PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 127 (145)
T ss_dssp ----TTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------
T ss_pred ----CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH
Confidence 24556788999999999999999999998877654443
No 21
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.72 E-value=2.2e-08 Score=77.40 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=73.1
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|.. +|+.|.+++.++ ..|++++.|+... ....|.||.++++.+++.+++|++...
T Consensus 33 ~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~------------- 93 (129)
T 3ga1_A 33 YCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGR------------- 93 (129)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSE-------------
T ss_pred CcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCc-------------
Confidence 45788876 799999999995 5899999999864 256788864699999999999999765
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~ 129 (227)
+.++.+.+.+|+.||++|+|+.|.+.|++++..
T Consensus 94 ---~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 94 ---LSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ---EECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ---cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345667799999999999999999999988754
No 22
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.70 E-value=5.2e-08 Score=76.24 Aligned_cols=97 Identities=8% Similarity=0.167 Sum_probs=79.2
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...|+|+. +|+.|.+++.++ ..|++++.|+... .. +...|.+|.+|+...++.+++|++...
T Consensus 36 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-~~--e~~~i~l~~~v~~~~~~~lL~~~Ytg~------------- 98 (138)
T 2z8h_A 36 LCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQ-TD--AELTVTLPEEVTVKGFEPLIQFAYTAK------------- 98 (138)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC-CC--TTEEEECCTTSCHHHHHHHHHHHHHSC-------------
T ss_pred CcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcC-CC--CCceEEeCCCCCHHHHHHHHHHhcCCC-------------
Confidence 35788876 589999999995 6899999998753 22 245688864799999999999999876
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~i 131 (227)
+.++.+.+.+|+.||++|+++.|.+.|++++...+
T Consensus 99 ---~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 99 ---LILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp ---CCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred ---cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 24566779999999999999999999999886543
No 23
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.63 E-value=7.3e-08 Score=83.57 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=79.8
Q ss_pred CccEEEEeC--CCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCC-----CCCHHHHHHHHHHHHhcCCCCCCc
Q 027130 15 KSYIWLQTA--DGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQ-----RVNPAMLSLILDYCRFHQVPGSSN 86 (227)
Q Consensus 15 ~~~i~L~Ss--DG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~-----~Vss~iL~kIieyc~~h~~~~~s~ 86 (227)
...|+|+.. ||+.|.+++.++ ..|++++.|+.. +..++....|.|+. +|++.+++.+++|++...
T Consensus 32 ~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~-~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~------ 104 (279)
T 3i3n_A 32 FCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG-QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGR------ 104 (279)
T ss_dssp TCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSE------
T ss_pred CCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC-CCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCC------
Confidence 457888876 799999999995 479999998764 33333455677752 699999999999999865
Q ss_pred cccchhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHH
Q 027130 87 KERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (227)
Q Consensus 87 ~~i~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEI 139 (227)
+.++.+.+.+|+.||++|+++.|.+.|++++...+.-.+.-.+
T Consensus 105 ----------~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i 147 (279)
T 3i3n_A 105 ----------IRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAI 147 (279)
T ss_dssp ----------EEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHH
T ss_pred ----------cccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHH
Confidence 3455677999999999999999999999999876554444333
No 24
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.59 E-value=2.1e-08 Score=76.88 Aligned_cols=91 Identities=14% Similarity=0.199 Sum_probs=74.7
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCC-CCHHHHHHHHHHHHhcCCCCCCccccchh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQR-VNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~-Vss~iL~kIieyc~~h~~~~~s~~~i~~w 92 (227)
...|+|+. +|+.|.+++.++ ..|++++.|+.... . +...|.+| + ++..+++.+++|++...
T Consensus 32 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~--e~~~i~l~-~~~~~~~f~~~l~~iYtg~------------ 94 (125)
T 3ohu_A 32 LCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQT-K--NDLVVSLP-EEVTARGFGPLLQFAYTAK------------ 94 (125)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCC-C--SSCEEECC-TTCCHHHHHHHHHHHTTSE------------
T ss_pred ccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCC-C--CCcEEEeC-CCCCHHHHHHHHHhHcCCc------------
Confidence 35788876 689999999994 57999999987532 1 35678998 6 99999999999998754
Q ss_pred hhhhccCChhHHHHHHhhhccCCcchHHHHHHHH
Q 027130 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRA 126 (227)
Q Consensus 93 D~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~ 126 (227)
+.++.+.+.+|+.||++|+|+.|.+.|+++
T Consensus 95 ----~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 95 ----LLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp ----EEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred ----eEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 345667899999999999999999888653
No 25
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.51 E-value=5.5e-07 Score=79.00 Aligned_cols=103 Identities=18% Similarity=0.176 Sum_probs=80.8
Q ss_pred CccEEEEeCCCCEEEecHHH-HhHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|.. +|+.|.+++.+ |.+|++++.|+.. ++.+.....|.|+ ++++.+++.+++|++....
T Consensus 174 ~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~-~~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~------------ 238 (312)
T 3hqi_A 174 FTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEH-EMEESKKNRVEIN-DVEPEVFKEMMCFIYTGKA------------ 238 (312)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCC------------
T ss_pred CCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhcc-CccccCCceEEec-CCCHHHHHHHHHhhcCCCC------------
Confidence 45788877 78999999999 4689999999864 3333346789999 8999999999999998652
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~ 136 (227)
.++.+.+.+|+.||++++++.|...|.+.+...+.-.+.
T Consensus 239 ----~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~ 277 (312)
T 3hqi_A 239 ----PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 277 (312)
T ss_dssp ----TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTH
T ss_pred ----CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHH
Confidence 233478899999999999999999999988765444443
No 26
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.51 E-value=1.2e-07 Score=73.01 Aligned_cols=87 Identities=13% Similarity=0.112 Sum_probs=72.0
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
-..++|.. +|+.|.+++.++ ..|++++. ....|.|+ +|++.+++.+++|++.-.
T Consensus 30 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~------------- 84 (119)
T 3m5b_A 30 LCDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGES------------- 84 (119)
T ss_dssp TCCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCC-------------
T ss_pred CcceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCC-------------
Confidence 35788876 699999999994 56888762 24568898 899999999999998755
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~ 129 (227)
+.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 85 ---~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 ---VELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ---EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred ---cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 456778899999999999999999999998754
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.47 E-value=9.4e-08 Score=73.44 Aligned_cols=93 Identities=10% Similarity=0.191 Sum_probs=74.7
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...|+|+. +|+.|.+++.++ ..|++++.|+... .. +...|.+|.+|+...++.+++|++...
T Consensus 29 ~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~-~~--e~~~i~l~~~v~~~~f~~lL~~iYtg~------------- 91 (124)
T 2ihc_A 29 LCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQ-AD--GELNITLPEEVTVKGFEPLIQFAYTAK------------- 91 (124)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSE-------------
T ss_pred CcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCC-CC--CCceEeecCCcCHHHHHHHHHHhcCCC-------------
Confidence 45788876 589999999994 5899999998743 22 245688854799999999999999865
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHHHHHHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~v 127 (227)
+.++.+.+.+|+.||++|+++.|.+.|++++
T Consensus 92 ---~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 92 ---LILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp ---EEEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred ---cccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 3455677999999999999999999998754
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.39 E-value=7.9e-07 Score=67.66 Aligned_cols=84 Identities=13% Similarity=0.145 Sum_probs=70.0
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHCHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhh
Q 027130 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD 93 (227)
...++|+. +|+.|.+++.++ ..|++++.|+... ...|.++ ++++.+++.+++|++...-.
T Consensus 31 ~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~----------- 91 (116)
T 3fkc_A 31 FCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV----------- 91 (116)
T ss_dssp TCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC-----------
T ss_pred ceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC-----------
Confidence 35788876 689999999995 6899999998642 4578998 89999999999999876521
Q ss_pred hhhccCChhHHHHHHhhhccCCcchHHH
Q 027130 94 EKFIRMDTKRLCELTSAADSLQLKPLVD 121 (227)
Q Consensus 94 ~eFl~id~~~L~eLi~AA~yL~I~~Lld 121 (227)
.++.+.+.+|+.||++|+|++|.+
T Consensus 92 ----~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 ----RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ----SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ----CCCHHHHHHHHHHHHHhCccccCc
Confidence 367788999999999999999875
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=88.08 E-value=2.2 Score=31.37 Aligned_cols=96 Identities=10% Similarity=0.187 Sum_probs=64.7
Q ss_pred ccEEEEeCCCCEEEecHHHHhHC--HHHHHHHhhcC-CC--CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccc
Q 027130 16 SYIWLQTADGSIQQVEQEVAMFC--PLICQEVIQKG-MG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (227)
Q Consensus 16 ~~i~L~SsDG~~f~V~~~~a~~S--~~I~~ml~~~~-~~--~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~ 90 (227)
..|+|. -.|+.|.++...+..- ..+..|+.... .. ..+...+=+ +-++..++.|+.|++..+-.-+.
T Consensus 6 ~~v~LN-VGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p~----- 77 (107)
T 3drz_A 6 KWVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK----- 77 (107)
T ss_dssp CEEEEE-ETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCCT-----
T ss_pred CEEEEE-ECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCCC-----
Confidence 456664 4599999999998754 36777765321 10 112344555 58999999999999986532110
Q ss_pred hhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHH
Q 027130 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (227)
Q Consensus 91 ~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~ 129 (227)
.+. ...|...|.|.+|.+|++++-..|..
T Consensus 78 -------~~~---~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 78 -------DLA---EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp -------TSC---HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -------CCC---HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 011 24678899999999999999877653
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=69.96 E-value=5.9 Score=32.91 Aligned_cols=98 Identities=11% Similarity=0.199 Sum_probs=66.0
Q ss_pred CccEEEEeCCCCEEEecHHHHhHCH--HHHHHHhhcC-CC--CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccc
Q 027130 15 KSYIWLQTADGSIQQVEQEVAMFCP--LICQEVIQKG-MG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKER 89 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a~~S~--~I~~ml~~~~-~~--~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i 89 (227)
+..|+|- -.|..|.+.+..+..-+ .+..|+.... .. ..+...+=+ +-++..++.|+.|++..+-.-+.
T Consensus 11 ~~~V~LN-VGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~lP~---- 83 (202)
T 3drx_A 11 SKWVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK---- 83 (202)
T ss_dssp CCEEEEE-ETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCCCCT----
T ss_pred CCEEEEE-ECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccCCCC----
Confidence 4567764 45999999998877543 5666654321 11 112344555 57999999999999986532110
Q ss_pred chhhhhhccCChhHHHHHHhhhccCCcchHHHHHHHHHHHH
Q 027130 90 KSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (227)
Q Consensus 90 ~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ 130 (227)
.+. ...|...|.|.+|.+|++++-..+...
T Consensus 84 --------~~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 84 --------DLA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp --------TSC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------CCC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 111 235789999999999999998888653
No 31
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=64.48 E-value=7.6 Score=29.48 Aligned_cols=92 Identities=10% Similarity=0.044 Sum_probs=58.0
Q ss_pred CccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcC---CCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccch
Q 027130 15 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKG---MGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKS 91 (227)
Q Consensus 15 ~~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~---~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~ 91 (227)
...|+| --.|..|.+.+..+..-+- .+|...+ ....+...+-+ +-++..++.|+.|++.-+-.-+ .
T Consensus 12 ~~~V~L-NVGG~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~Fi--DRdp~~F~~ILnflR~G~l~~p------~ 80 (124)
T 1s1g_A 12 DELIVL-NVSGRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYP------R 80 (124)
T ss_dssp CCEEEE-EETTEEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEE--CSCHHHHHHHHHHHHHSCBCCC------T
T ss_pred CCEEEE-EeCCEEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEE--cCChHHHHHHHHHHhcCCCCCC------C
Confidence 345555 5569999999988764320 0111111 01112345556 5799999999999998652200 0
Q ss_pred hhhhhccCChhHHHHHHhhhccCCcchH-HHHHHHH
Q 027130 92 FDEKFIRMDTKRLCELTSAADSLQLKPL-VDLTSRA 126 (227)
Q Consensus 92 wD~eFl~id~~~L~eLi~AA~yL~I~~L-ldl~c~~ 126 (227)
++ .+-.|...|.|.+|.+| ++.||..
T Consensus 81 ------~~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 81 ------YE---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp ------TS---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred ------Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 01 25678899999999998 5888854
No 32
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure funded by NI protein structure initiative, PSI; 2.30A {Streptococcus pyogenes} SCOP: d.224.1.2
Probab=45.73 E-value=42 Score=26.37 Aligned_cols=74 Identities=16% Similarity=0.107 Sum_probs=44.8
Q ss_pred HHhhhccCCcchHHHHHH-HHHHHHHhCCCHHHHHhhcCC-----C-CCCChhhhh---cccccCCCchhHHHhHHHHHH
Q 027130 107 LTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIREIFHL-----P-DDLTEEEKL---EPLKNTTDDPRIRLLNRLYAK 176 (227)
Q Consensus 107 Li~AA~yL~I~~Lldl~c-~~vA~~ikGKT~eEIR~~f~I-----~-~D~T~EEe~---e~~~~~~~~p~~~~~~~l~~~ 176 (227)
.|..+.|-.----+-.+| ..++.+++|||.+|..++.+. . ++..++++. +.+..+..+|.-..|--|=-+
T Consensus 54 ~I~d~~F~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~~f~~ml~~~~~~~~~~L~~l~~l~gv~~~p~R~~Ca~La~~ 133 (159)
T 1su0_B 54 KIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAWN 133 (159)
T ss_dssp SEEEEEEEEECCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTCCCGGGGGGGGGGGGGGGGGCHHHHHHHHHHHH
T ss_pred EEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCCCCchhhhchhhhhcCcccCcchhHHHHHHHH
Confidence 455566655554444554 456789999999999887542 2 234444333 344456667777777777444
Q ss_pred HHHH
Q 027130 177 KRKE 180 (227)
Q Consensus 177 ~~~~ 180 (227)
..+.
T Consensus 134 Al~~ 137 (159)
T 1su0_B 134 ALKE 137 (159)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 33
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=42.63 E-value=32 Score=18.65 Aligned_cols=21 Identities=43% Similarity=0.563 Sum_probs=16.2
Q ss_pred HHHhHHHHHHHHHHHHHHhhh
Q 027130 167 IRLLNRLYAKKRKELKEREKL 187 (227)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~ 187 (227)
+|-+-.|-.|.|+||++|+..
T Consensus 3 lrtitnlqkkirkelkqrqlk 23 (26)
T 1m46_B 3 LRTITNLQKKIRKELKQRQLK 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 466777878899999888643
No 34
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=36.76 E-value=19 Score=24.97 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=26.2
Q ss_pred hhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcC
Q 027130 101 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 101 ~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~ 144 (227)
.+.+|+-..|..-.+-+.- -..||..+-|||++|+++.|.
T Consensus 15 E~k~fe~ALa~~~~~tp~r----We~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGF----WSEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSH----HHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccH----HHHHHHHcCCCCHHHHHHHHH
Confidence 4455555555444444443 356888999999999987553
No 35
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=33.19 E-value=27 Score=23.94 Aligned_cols=19 Identities=11% Similarity=0.291 Sum_probs=14.8
Q ss_pred HHHHHHHhCCCHHHHHhhcC
Q 027130 125 RALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 125 ~~vA~~ikGKT~eEIR~~f~ 144 (227)
..||..+ |||++|+++.+.
T Consensus 35 ~~IA~~l-gRt~~eV~~~y~ 53 (72)
T 2cqq_A 35 EKIAHEL-GRSVTDVTTKAK 53 (72)
T ss_dssp HHHHHHH-TSCHHHHHHHHH
T ss_pred HHHHHHh-CCCHHHHHHHHH
Confidence 4577776 999999998664
No 36
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=33.05 E-value=1e+02 Score=23.35 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=38.5
Q ss_pred HHhhhccCCcchHHHHHH-HHHHHHHhCCCHHHHHhhcCC------CCCCChh--hhhcccccCCCchhHHHhHHH
Q 027130 107 LTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIREIFHL------PDDLTEE--EKLEPLKNTTDDPRIRLLNRL 173 (227)
Q Consensus 107 Li~AA~yL~I~~Lldl~c-~~vA~~ikGKT~eEIR~~f~I------~~D~T~E--Ee~e~~~~~~~~p~~~~~~~l 173 (227)
.|..+.|-.----+..+| ..++.+++|||.+|..++.+. .++..++ ++.+.+..+..+|.-..|--|
T Consensus 53 ~I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~~~~~~ml~~~~~~~~~l~~l~~l~~v~~~p~R~~Ca~L 128 (138)
T 2qq4_A 53 TIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLPARVKCATL 128 (138)
T ss_dssp EEEEEEEEEECCHHHHHHHHHHHHHHTTSBHHHHHHHHHHHHHHHTTCCCCCGGGGGGGGGGGGGGCGGGHHHHHH
T ss_pred EEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCCchhhhhHHhhccCcccCcchhhHHHH
Confidence 355555555444444444 456789999999999886531 1122111 224445556666765666655
No 37
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.32 E-value=20 Score=23.93 Aligned_cols=31 Identities=6% Similarity=0.207 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCCHHHHHhhcC------CC-CCCChhhh
Q 027130 124 SRALARIIEGKTPEEIREIFH------LP-DDLTEEEK 154 (227)
Q Consensus 124 c~~vA~~ikGKT~eEIR~~f~------I~-~D~T~EEe 154 (227)
-..||..+.|+|+.++|..+. |. ..+|+||+
T Consensus 32 W~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 32 WSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp HHHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 366888899999999999652 22 35777764
No 38
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=30.97 E-value=11 Score=26.34 Aligned_cols=46 Identities=17% Similarity=0.360 Sum_probs=33.4
Q ss_pred cCChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Q 027130 98 RMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPD 147 (227)
Q Consensus 98 ~id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~I~~ 147 (227)
....+.+|+-..|..--+-+.-. ..||..+-|||++|++..+.++.
T Consensus 24 T~eE~K~FE~ALa~yp~~tpdRW----ekIA~~VpGKT~eEVk~hY~~~~ 69 (74)
T 4eef_G 24 KFSENIAFEIALSFTNKDTPDRW----KKVAQYVKGRTPEEVKKHYELEH 69 (74)
T ss_dssp CTTHHHHHHHHTSSSCSSCCSSS----TTTGGGSCSSCHHHHHGGGC---
T ss_pred CHHHHHHHHHHHHHCCCCCCcHH----HHHHHHcCCCCHHHHHHHHHHhh
Confidence 45678899988888766554433 45788888999999999988763
No 39
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=29.91 E-value=1.5e+02 Score=21.03 Aligned_cols=80 Identities=9% Similarity=0.020 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCccccchhhhhhccCChhHHHHHHhhhccCCcchHHHHH-HHHHHHHHh--CCCHHHH
Q 027130 63 RVNPAMLSLILDYCRFHQVPGSSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLT-SRALARIIE--GKTPEEI 139 (227)
Q Consensus 63 ~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD~eFl~id~~~L~eLi~AA~yL~I~~Lldl~-c~~vA~~ik--GKT~eEI 139 (227)
.+....+.+|++|+..|...+.+ +.++ .+-+.+....|..++... -+....++... ......++. +.|..||
T Consensus 3 ~~~~~~~~~~~~~i~~~~~~~~~---~~~l-A~~~~~S~~~l~r~fk~~-G~s~~~~~~~~Rl~~A~~lL~~~~~si~eI 77 (120)
T 3mkl_A 3 ALQPNMRTRVCTVINNNIAHEWT---LARI-ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRV 77 (120)
T ss_dssp --CCCHHHHHHHHHHTSTTSCCC---HHHH-HHHTTCCHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTSTTCCHHHH
T ss_pred cccHHHHHHHHHHHHHhccCCCC---HHHH-HHHHCcCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 35667888999999888754322 2222 223566777777777653 33333333222 222233443 5678888
Q ss_pred HhhcCCCC
Q 027130 140 REIFHLPD 147 (227)
Q Consensus 140 R~~f~I~~ 147 (227)
-..+|-.+
T Consensus 78 A~~~Gf~~ 85 (120)
T 3mkl_A 78 AVSCGYHS 85 (120)
T ss_dssp HHHTTCSC
T ss_pred HHHHCCCC
Confidence 77777664
No 40
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=28.84 E-value=22 Score=27.44 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=57.0
Q ss_pred ccEEEEeCCCCEEEecHHHHhHCHHHHHHHhhcC---CCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchh
Q 027130 16 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKG---MGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (227)
Q Consensus 16 ~~i~L~SsDG~~f~V~~~~a~~S~~I~~ml~~~~---~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~w 92 (227)
..|+| --.|..|.+.+..+..-+- .+|...+ ....+...+-+ +-++..++.|+.|++..+-.-+.
T Consensus 35 ~~V~L-NVGG~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFi--DRdp~~F~~ILnflR~G~l~~p~------- 102 (140)
T 2nz0_B 35 ELIVL-NVSGRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYPR------- 102 (140)
T ss_dssp CEEEE-EETTEEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEE--CSCHHHHHHHHHHHHHSSBCCCT-------
T ss_pred CEEEE-EECCEEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEE--eCCcHHHHHHHHHHhcCCcCCCC-------
Confidence 34555 5569999999988764320 0111111 00112445556 57999999999999986522000
Q ss_pred hhhhccCChhHHHHHHhhhccCCcchH-HHHHHHH
Q 027130 93 DEKFIRMDTKRLCELTSAADSLQLKPL-VDLTSRA 126 (227)
Q Consensus 93 D~eFl~id~~~L~eLi~AA~yL~I~~L-ldl~c~~ 126 (227)
++ .+-.|...|.|.+|..| ++.||..
T Consensus 103 -----~~---~~~~l~eEa~fy~i~~l~l~~CC~~ 129 (140)
T 2nz0_B 103 -----YE---CISAYDDELAFYGILPEIIGDCCYE 129 (140)
T ss_dssp -----TS---CHHHHHHHHHHHTCCGGGBCTTTHH
T ss_pred -----Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 01 25678899999999998 5677743
No 41
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=27.41 E-value=36 Score=24.55 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=27.1
Q ss_pred HHHHHHHHhCCCHHHHHhhcC------C-CCCCChhhhhcccc
Q 027130 124 SRALARIIEGKTPEEIREIFH------L-PDDLTEEEKLEPLK 159 (227)
Q Consensus 124 c~~vA~~ikGKT~eEIR~~f~------I-~~D~T~EEe~e~~~ 159 (227)
-..||..+.|+|+.+.|+.+. | ...+|+||....+.
T Consensus 24 W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 24 WIRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 356888889999999998642 2 34799999877554
No 42
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Probab=26.65 E-value=50 Score=24.93 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=25.5
Q ss_pred HHhhhccCCcchHHHHH-HHHHHHHHhCCCHHHHHhhcC
Q 027130 107 LTSAADSLQLKPLVDLT-SRALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 107 Li~AA~yL~I~~Lldl~-c~~vA~~ikGKT~eEIR~~f~ 144 (227)
.|..+.|-.----+..+ +..++.+++|||.+|..++.+
T Consensus 53 ~I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~~ 91 (129)
T 3lvl_A 53 IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKN 91 (129)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTTCCHHHHHTCCH
T ss_pred eEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 45556655544444444 455678999999999987654
No 43
>3g5o_A Uncharacterized protein RV2865; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=26.43 E-value=98 Score=22.48 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=39.0
Q ss_pred CChhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCC--CHHHHHhhcCCCC
Q 027130 99 MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGK--TPEEIREIFHLPD 147 (227)
Q Consensus 99 id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGK--T~eEIR~~f~I~~ 147 (227)
++.+..-.|....+.|..+.+.....+.+++.-.|+ |.+|+++.+|+..
T Consensus 47 ~s~e~ye~l~etl~LL~~~~~~~~L~~a~~~~~~G~~~s~eev~~~lgl~~ 97 (108)
T 3g5o_A 47 VGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPR 97 (108)
T ss_dssp EEHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHTCEECHHHHHHHHTCCC
T ss_pred ecHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHcCCCcCHHHHHHHhCCCc
Confidence 344444556677777888999999999999888886 8999999999975
No 44
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=25.48 E-value=23 Score=25.79 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=51.8
Q ss_pred CCCEEEecHHHHhHCH--HHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCccccchhhhhhccCCh
Q 027130 24 DGSIQQVEQEVAMFCP--LICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEKFIRMDT 101 (227)
Q Consensus 24 DG~~f~V~~~~a~~S~--~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIieyc~~h~~~~~s~~~i~~wD~eFl~id~ 101 (227)
.|+.|.+++..+..-+ .+..+ ........+...+-+ +-++..++.|+.|++..+-.-+ . ++
T Consensus 7 GG~~f~t~~~TL~~~p~s~L~~~-~~~~~~~~~~~~~Fi--DRdp~~F~~ILnflR~g~l~~p------~------~~-- 69 (105)
T 1nn7_A 7 SGTRFQTWQDTLERYPDTLLGSS-ERDFFYHPETQQYFF--DRDPDIFRHILNFYRTGKLHYP------R------HE-- 69 (105)
T ss_dssp TTEEEEECHHHHHTSCSSSTTSG-GGGGGEEGGGTEEEE--CSCTTTHHHHHHHHHHSCBCCC------T------TS--
T ss_pred CCEEEEEeHHHHhcCCCcccccc-CCcccccCCCCcEEE--eCCcHHHHHHHHHHhcCCCCCC------C------Cc--
Confidence 5899999988865432 11110 000000012344555 4799999999999998652200 0 01
Q ss_pred hHHHHHHhhhccCCcchH-HHHHHHH
Q 027130 102 KRLCELTSAADSLQLKPL-VDLTSRA 126 (227)
Q Consensus 102 ~~L~eLi~AA~yL~I~~L-ldl~c~~ 126 (227)
.+-.|...|.|.+|.+| ++-||..
T Consensus 70 -~~~~l~~Ea~fy~i~~l~~~~cc~~ 94 (105)
T 1nn7_A 70 -CISAYDEELAFFGLIPEIIGDCCYE 94 (105)
T ss_dssp -CHHHHHHHHHHHTCCSCCBCHHHHH
T ss_pred -CHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 25678899999999998 5777754
No 45
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=25.28 E-value=47 Score=21.41 Aligned_cols=21 Identities=24% Similarity=0.213 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCHHHHHhhcC
Q 027130 124 SRALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 124 c~~vA~~ikGKT~eEIR~~f~ 144 (227)
-..||..+.|+|+.++|..|.
T Consensus 31 W~~Ia~~~~~Rt~~qcr~r~~ 51 (60)
T 1x41_A 31 WQDVANQMCTKTKEECEKHYM 51 (60)
T ss_dssp HHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHH
Confidence 366888999999999998653
No 46
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=25.16 E-value=58 Score=25.14 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=38.1
Q ss_pred HHhhhccCCcchHHHHHH-HHHHHHHhCCCHHHHHhhcCC------CCCCChhh---hhcccccCCCchhHHHhHHH
Q 027130 107 LTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIREIFHL------PDDLTEEE---KLEPLKNTTDDPRIRLLNRL 173 (227)
Q Consensus 107 Li~AA~yL~I~~Lldl~c-~~vA~~ikGKT~eEIR~~f~I------~~D~T~EE---e~e~~~~~~~~p~~~~~~~l 173 (227)
.|..+.|-.----+-.+| ..++.+++|||.+|..++.+. .++..+++ ..+.+..+...|.-..|--|
T Consensus 55 ~I~d~~f~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~~~~~ml~~~~~~~~~~l~~l~~l~~v~~~p~R~~Ca~L 131 (147)
T 1xjs_A 55 IVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPARIKCATL 131 (147)
T ss_dssp BCCEEEEEEESSHHHHHHHHHHHHHHTTSBHHHHHHHHHHHHHHHHHCSCCSSCCCHHHHHHHHHTTSTTTHHHHHH
T ss_pred eEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCCCchhhhchhhhhcCcccCcchhHHHHH
Confidence 455566655544444444 456789999999999887542 01222222 22334445555665556555
No 47
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=24.29 E-value=63 Score=24.31 Aligned_cols=60 Identities=13% Similarity=0.028 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccchhhhhhcc--CChhHHHHHHhhhccCCcchHHHHHHHHHHHH
Q 027130 66 PAMLSLILDYCRFHQVPGSSNKERKSFDEKFIR--MDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (227)
Q Consensus 66 s~iL~kIieyc~~h~~~~~s~~~i~~wD~eFl~--id~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ 130 (227)
...+..++.-+.+..-+ .+...-.+|+. ++.+.+++++..|...+.+.|.+.|.++++..
T Consensus 102 ~~~~~~ll~~A~~~~~~-----~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 102 DKMADDLLAAADKYALE-----RLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp GGTHHHHHHHHHHTTCH-----HHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34444555555554421 34444555554 68889999999999999999999999999874
No 48
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=23.54 E-value=32 Score=24.69 Aligned_cols=18 Identities=50% Similarity=0.728 Sum_probs=16.5
Q ss_pred CCCHHHHHhhcCCCCCCC
Q 027130 133 GKTPEEIREIFHLPDDLT 150 (227)
Q Consensus 133 GKT~eEIR~~f~I~~D~T 150 (227)
|.||+|=|+.||++.|+.
T Consensus 43 gltpeeYR~kwGlp~dyP 60 (87)
T 2jsp_A 43 SMTPEEYREKWDLPVDYP 60 (87)
T ss_dssp CSCHHHHHHHTTCGGGCC
T ss_pred CCCHHHHHHHhCCCCCCc
Confidence 999999999999998754
No 49
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=23.21 E-value=42 Score=24.15 Aligned_cols=21 Identities=38% Similarity=0.754 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCHHHHHhhcC
Q 027130 124 SRALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 124 c~~vA~~ikGKT~eEIR~~f~ 144 (227)
-..||..+-|+|.+|+|..|.
T Consensus 34 W~~IA~~vpGRT~~q~k~ry~ 54 (93)
T 2cjj_A 34 WANVARAVEGRTPEEVKKHYE 54 (93)
T ss_dssp HHHHHHHSTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHH
Confidence 467899999999999998765
No 50
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=23.01 E-value=54 Score=22.65 Aligned_cols=22 Identities=14% Similarity=0.095 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCHHHHHhhcCC
Q 027130 124 SRALARIIEGKTPEEIREIFHL 145 (227)
Q Consensus 124 c~~vA~~ikGKT~eEIR~~f~I 145 (227)
-..||..+.|+|+.|+|..|..
T Consensus 40 W~~IA~~v~~RT~~qcr~r~~~ 61 (79)
T 2yus_A 40 WNKVSEHVGSRTQDECILHFLR 61 (79)
T ss_dssp HHHHHHHHSSCCHHHHHHHHTT
T ss_pred HHHHHHHcCCCCHHHHHHHHHH
Confidence 4678999999999999997653
No 51
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=22.05 E-value=35 Score=21.61 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=25.8
Q ss_pred HHHHHhCC-CHHHHHhhcCCCCCCChhhhhcccccCCCchh
Q 027130 127 LARIIEGK-TPEEIREIFHLPDDLTEEEKLEPLKNTTDDPR 166 (227)
Q Consensus 127 vA~~ikGK-T~eEIR~~f~I~~D~T~EEe~e~~~~~~~~p~ 166 (227)
.-.+..|. +.++||+..+- .|+|++|-.++ |.+||
T Consensus 11 ~D~W~~GT~~~~~mR~AV~~-G~iTQ~E~D~I----~~ypw 46 (51)
T 2xf7_A 11 LDSWLDGTASEELLRVAVNA-GDLTQEEADKI----MSYPW 46 (51)
T ss_dssp HHHHHHTCCCHHHHHHHHHH-TSSCHHHHHHH----HTSCT
T ss_pred HHHHhcchhhHHHHHHHHhc-CcccHHHHHHH----HhCcc
Confidence 34577775 78899987764 48999998884 45665
No 52
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=21.98 E-value=34 Score=24.43 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCHHHHHhhcC------C-CCCCChhhhhccc
Q 027130 124 SRALARIIEGKTPEEIREIFH------L-PDDLTEEEKLEPL 158 (227)
Q Consensus 124 c~~vA~~ikGKT~eEIR~~f~------I-~~D~T~EEe~e~~ 158 (227)
-..||..+.|+|+.++|+.+. + ...+|+||+...+
T Consensus 27 W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~ 68 (105)
T 1gv2_A 27 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIY 68 (105)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHH
T ss_pred HHHHhhhhcCCCHHHHHHHHHhccCCcccccCCCHHHHHHHH
Confidence 456888888999999998653 2 2469999887644
No 53
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae}
Probab=21.30 E-value=96 Score=28.01 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=29.2
Q ss_pred hhHHHHHHhhhccCCcchHHHHHHHHHHHHHhCCCHHHHHhhcC
Q 027130 101 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 101 ~~~L~eLi~AA~yL~I~~Lldl~c~~vA~~ikGKT~eEIR~~f~ 144 (227)
.+.|-.++.|++.|.++.=..--...+-+...--|+.+|.+++.
T Consensus 282 ~~~L~~l~Qa~~lLq~~k~~~~d~~~i~~~C~~Ln~~Ql~~il~ 325 (419)
T 2f6h_X 282 TECLQHLIQTAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLIS 325 (419)
T ss_dssp HHHTHHHHHHHHHTTSCCSSHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCchhhHHHHHHHhhcCCHHHHHHHHH
Confidence 45688999999999987622222222434445668999988764
No 54
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=20.88 E-value=56 Score=23.76 Aligned_cols=19 Identities=26% Similarity=0.504 Sum_probs=15.4
Q ss_pred HHHHHHHhCCCHHHHHhhc
Q 027130 125 RALARIIEGKTPEEIREIF 143 (227)
Q Consensus 125 ~~vA~~ikGKT~eEIR~~f 143 (227)
.++|..+.+||++|++..|
T Consensus 59 a~iA~~L~Nks~nqV~~RF 77 (95)
T 1ug2_A 59 SVISQQLGNKTPVEVSHRF 77 (95)
T ss_dssp HHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHH
Confidence 3488888899999998655
No 55
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.53 E-value=52 Score=21.37 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=16.2
Q ss_pred HHHHHHHhCCCHHHHHhhcC
Q 027130 125 RALARIIEGKTPEEIREIFH 144 (227)
Q Consensus 125 ~~vA~~ikGKT~eEIR~~f~ 144 (227)
..||..+.|||+.+++.++-
T Consensus 35 ~~Ia~~l~~rt~~~~v~~Yy 54 (61)
T 2eqr_A 35 GLIASYLERKSVPDCVLYYY 54 (61)
T ss_dssp HHHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHH
Confidence 45788899999999988653
Done!