BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027131
         (227 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8SRG3|AMP12_ENCCU Probable M1 family aminopeptidase 2 OS=Encephalitozoon cuniculi
           (strain GB-M1) GN=ECU08_0070 PE=3 SV=1
          Length = 864

 Score = 31.6 bits (70), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 144 MPYNGKTVLLQNVPRIAVAEDVERFLSGCEYEASSISFMLRQSLPDSIKW 193
           M YN   + L++V    + E VERFLSG ++  S++S    + + + I+W
Sbjct: 797 MLYNMIIMSLRHVSGDLIVEKVERFLSGIKHSGSNLSI---EKVRNEIQW 843


>sp|Q8SQI6|AMP11_ENCCU Probable M1 family aminopeptidase 1 OS=Encephalitozoon cuniculi
           (strain GB-M1) GN=ECU01_0140 PE=3 SV=1
          Length = 864

 Score = 31.6 bits (70), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 144 MPYNGKTVLLQNVPRIAVAEDVERFLSGCEYEASSISFMLRQSLPDSIKW 193
           M YN   + L++V    + E VERFLSG ++  S++S    + + + I+W
Sbjct: 797 MLYNMIIMSLRHVSGDLIVEKVERFLSGIKHSGSNLSI---EKVRNEIQW 843


>sp|Q6P423|MED23_XENLA Mediator of RNA polymerase II transcription subunit 23 OS=Xenopus
            laevis GN=med23 PE=2 SV=1
          Length = 1369

 Score = 30.8 bits (68), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 33   HFSTETEAPPPPPPNDAS 50
            H STE+ APPPPP N  S
Sbjct: 1334 HISTESAAPPPPPMNSGS 1351


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,921,721
Number of Sequences: 539616
Number of extensions: 3384113
Number of successful extensions: 17788
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 17768
Number of HSP's gapped (non-prelim): 26
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)