Query 027134
Match_columns 227
No_of_seqs 179 out of 1741
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 08:33:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3y_A Epididymal secretory gl 100.0 3.1E-34 1.1E-38 227.3 19.9 161 64-226 30-212 (215)
2 2v1m_A Glutathione peroxidase; 100.0 3E-34 1E-38 218.3 18.4 164 63-226 5-168 (169)
3 2f8a_A Glutathione peroxidase 100.0 2.2E-34 7.5E-39 227.4 18.2 163 64-226 21-208 (208)
4 2gs3_A PHGPX, GPX-4, phospholi 100.0 5.8E-34 2E-38 220.8 17.8 162 62-224 22-185 (185)
5 2r37_A Glutathione peroxidase 100.0 1.3E-33 4.4E-38 222.7 18.8 161 64-226 12-194 (207)
6 2obi_A PHGPX, GPX-4, phospholi 100.0 6.5E-34 2.2E-38 220.1 16.4 162 62-224 20-183 (183)
7 3dwv_A Glutathione peroxidase- 100.0 2.5E-34 8.5E-39 223.3 13.9 161 64-226 21-184 (187)
8 2p5q_A Glutathione peroxidase 100.0 1.5E-33 5.1E-38 214.7 17.3 164 64-227 7-170 (170)
9 3kij_A Probable glutathione pe 100.0 3E-33 1E-37 215.8 17.9 155 63-226 12-171 (180)
10 2p31_A CL683, glutathione pero 100.0 2.9E-33 9.8E-38 216.2 15.6 152 62-225 22-181 (181)
11 2vup_A Glutathione peroxidase- 100.0 3E-32 1E-36 212.0 17.2 158 64-226 23-186 (190)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 2.8E-32 9.6E-37 208.5 14.2 157 65-227 8-170 (171)
13 3eyt_A Uncharacterized protein 100.0 1.8E-31 6.1E-36 200.9 13.2 148 65-226 2-153 (158)
14 3fw2_A Thiol-disulfide oxidore 100.0 1E-30 3.6E-35 195.4 16.8 139 63-227 5-150 (150)
15 3lor_A Thiol-disulfide isomera 100.0 5.2E-31 1.8E-35 198.6 14.2 151 64-226 4-156 (160)
16 4g2e_A Peroxiredoxin; redox pr 100.0 5.2E-31 1.8E-35 199.2 11.1 146 64-223 5-156 (157)
17 4hde_A SCO1/SENC family lipopr 100.0 5.4E-30 1.9E-34 196.0 16.7 157 64-225 7-170 (170)
18 4fo5_A Thioredoxin-like protei 100.0 5.9E-31 2E-35 195.2 11.0 133 63-222 7-142 (143)
19 3ewl_A Uncharacterized conserv 100.0 2.8E-30 9.4E-35 191.0 13.4 136 64-225 2-141 (142)
20 3lwa_A Secreted thiol-disulfid 100.0 1.3E-29 4.4E-34 195.6 15.7 146 62-227 30-183 (183)
21 3eur_A Uncharacterized protein 100.0 8.2E-30 2.8E-34 188.8 13.7 132 64-221 6-141 (142)
22 3fkf_A Thiol-disulfide oxidore 100.0 2.2E-29 7.6E-34 186.9 15.4 139 63-227 5-148 (148)
23 2lrn_A Thiol:disulfide interch 100.0 1.2E-29 4E-34 190.1 13.8 140 63-226 3-142 (152)
24 1xzo_A BSSCO, hypothetical pro 100.0 3.4E-29 1.2E-33 191.3 16.3 158 63-226 7-173 (174)
25 2f9s_A Thiol-disulfide oxidore 100.0 1.7E-29 5.9E-34 188.7 14.1 139 64-226 1-139 (151)
26 3drn_A Peroxiredoxin, bacterio 100.0 2E-29 6.8E-34 190.9 14.4 123 64-211 3-131 (161)
27 3u5r_E Uncharacterized protein 100.0 1.8E-29 6.2E-34 200.5 14.8 148 62-226 31-188 (218)
28 4gqc_A Thiol peroxidase, perox 100.0 8.9E-31 3.1E-35 199.3 5.5 148 64-226 6-161 (164)
29 2ggt_A SCO1 protein homolog, m 100.0 3.9E-29 1.3E-33 189.1 14.2 154 68-226 2-162 (164)
30 3or5_A Thiol:disulfide interch 100.0 8.3E-29 2.8E-33 187.3 15.6 145 63-226 8-152 (165)
31 3hcz_A Possible thiol-disulfid 100.0 6.2E-29 2.1E-33 184.5 14.2 140 63-225 5-146 (148)
32 3gkn_A Bacterioferritin comigr 100.0 5.6E-29 1.9E-33 188.5 14.1 149 63-225 7-162 (163)
33 3raz_A Thioredoxin-related pro 100.0 3.7E-29 1.3E-33 187.1 12.8 136 69-226 3-141 (151)
34 2rli_A SCO2 protein homolog, m 100.0 1.4E-28 4.8E-33 187.4 14.8 152 70-226 7-165 (171)
35 3gl3_A Putative thiol:disulfid 100.0 2.7E-28 9.1E-33 182.2 16.0 138 63-225 3-142 (152)
36 2l5o_A Putative thioredoxin; s 100.0 1.5E-28 5.3E-33 183.7 14.6 140 64-226 3-142 (153)
37 3kh7_A Thiol:disulfide interch 100.0 1.8E-28 6.2E-33 188.4 14.8 139 61-226 28-168 (176)
38 2ywi_A Hypothetical conserved 100.0 1.3E-28 4.5E-33 191.7 14.2 147 63-226 18-175 (196)
39 2lrt_A Uncharacterized protein 100.0 2.1E-28 7.1E-33 183.6 14.7 133 64-224 10-144 (152)
40 2cvb_A Probable thiol-disulfid 100.0 1.8E-28 6.1E-33 190.0 14.6 146 63-226 7-160 (188)
41 3me7_A Putative uncharacterize 100.0 1.9E-28 6.4E-33 187.4 14.0 156 64-226 2-163 (170)
42 3ixr_A Bacterioferritin comigr 100.0 1.1E-28 3.8E-33 190.2 12.0 150 63-225 21-178 (179)
43 2lja_A Putative thiol-disulfid 100.0 7.6E-28 2.6E-32 179.7 16.2 141 63-226 3-144 (152)
44 1jfu_A Thiol:disulfide interch 100.0 5.3E-28 1.8E-32 186.9 15.4 145 63-226 34-181 (186)
45 1we0_A Alkyl hydroperoxide red 100.0 8.6E-28 3E-32 186.2 15.8 137 64-225 2-157 (187)
46 3kcm_A Thioredoxin family prot 100.0 6.6E-28 2.2E-32 180.4 14.5 139 64-225 3-143 (154)
47 2c0d_A Thioredoxin peroxidase 100.0 5.2E-28 1.8E-32 192.4 14.2 142 63-224 25-183 (221)
48 1n8j_A AHPC, alkyl hydroperoxi 100.0 3.2E-28 1.1E-32 188.8 12.6 142 64-224 2-155 (186)
49 2yzh_A Probable thiol peroxida 100.0 1E-27 3.5E-32 183.2 14.7 143 63-224 21-171 (171)
50 3erw_A Sporulation thiol-disul 100.0 7.5E-28 2.6E-32 177.8 13.3 137 62-220 8-144 (145)
51 2bmx_A Alkyl hydroperoxidase C 100.0 1.8E-27 6E-32 185.7 15.3 137 63-224 4-169 (195)
52 1xvw_A Hypothetical protein RV 100.0 7.4E-28 2.5E-32 181.6 12.5 127 63-213 9-144 (160)
53 2b5x_A YKUV protein, TRXY; thi 100.0 1.1E-27 3.7E-32 177.5 13.1 143 64-226 2-146 (148)
54 2b7k_A SCO1 protein; metalloch 100.0 1.1E-27 3.7E-32 187.8 13.4 157 64-225 14-179 (200)
55 1zof_A Alkyl hydroperoxide-red 100.0 1.4E-27 4.7E-32 186.7 13.9 136 64-224 2-160 (198)
56 1psq_A Probable thiol peroxida 100.0 1.7E-27 5.7E-32 180.7 13.6 140 63-222 16-162 (163)
57 3p7x_A Probable thiol peroxida 99.9 1.4E-27 4.7E-32 181.7 12.6 126 63-209 20-147 (166)
58 2k6v_A Putative cytochrome C o 99.9 1.6E-28 5.6E-33 187.0 7.2 152 64-224 11-172 (172)
59 2i81_A 2-Cys peroxiredoxin; st 99.9 1.9E-27 6.4E-32 188.3 13.3 137 63-224 21-179 (213)
60 1zzo_A RV1677; thioredoxin fol 99.9 3.9E-27 1.3E-31 172.0 14.1 134 66-226 2-136 (136)
61 2a4v_A Peroxiredoxin DOT5; yea 99.9 9.4E-28 3.2E-32 181.2 11.0 125 63-214 7-140 (159)
62 2pn8_A Peroxiredoxin-4; thiore 99.9 1.6E-27 5.4E-32 188.5 12.7 143 63-224 19-176 (211)
63 1uul_A Tryparedoxin peroxidase 99.9 3.7E-27 1.3E-31 184.9 14.3 136 64-224 7-164 (202)
64 3ia1_A THIO-disulfide isomeras 99.9 1.2E-27 4.1E-32 179.2 11.0 141 63-226 5-145 (154)
65 3ha9_A Uncharacterized thiored 99.9 7.4E-28 2.5E-32 182.5 9.9 141 63-225 11-164 (165)
66 1q98_A Thiol peroxidase, TPX; 99.9 1.6E-27 5.4E-32 181.3 11.6 130 63-209 17-148 (165)
67 2hyx_A Protein DIPZ; thioredox 99.9 1.8E-27 6.1E-32 201.1 13.0 146 62-226 50-200 (352)
68 3ztl_A Thioredoxin peroxidase; 99.9 1.9E-27 6.4E-32 189.4 11.9 127 62-213 39-182 (222)
69 2h01_A 2-Cys peroxiredoxin; th 99.9 3.5E-27 1.2E-31 183.5 13.1 136 64-224 1-158 (192)
70 1lu4_A Soluble secreted antige 99.9 7E-27 2.4E-31 170.9 13.3 132 67-225 2-136 (136)
71 2jsy_A Probable thiol peroxida 99.9 1.4E-27 4.9E-32 181.5 9.8 143 63-225 18-167 (167)
72 3zrd_A Thiol peroxidase; oxido 99.9 4.2E-27 1.4E-31 184.5 12.2 143 63-222 52-198 (200)
73 1xvq_A Thiol peroxidase; thior 99.9 6.2E-27 2.1E-31 179.7 12.7 145 63-226 18-166 (175)
74 1qmv_A Human thioredoxin perox 99.9 1.2E-26 3.9E-31 181.4 14.1 137 63-224 5-162 (197)
75 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.9E-27 6.6E-32 180.4 9.1 133 63-210 4-146 (162)
76 1zye_A Thioredoxin-dependent p 99.9 1.6E-26 5.4E-31 183.8 14.7 137 63-224 27-184 (220)
77 3qpm_A Peroxiredoxin; oxidored 99.9 8.1E-27 2.8E-31 187.8 12.9 143 62-223 47-204 (240)
78 2b1k_A Thiol:disulfide interch 99.9 1.2E-26 4.2E-31 176.3 13.0 137 63-226 22-161 (168)
79 4evm_A Thioredoxin family prot 99.9 3E-26 1E-30 167.2 14.4 136 68-223 1-137 (138)
80 3hdc_A Thioredoxin family prot 99.9 8.1E-27 2.8E-31 175.7 11.1 133 62-221 14-148 (158)
81 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 6.3E-27 2.1E-31 178.5 9.9 134 63-211 3-143 (167)
82 1kng_A Thiol:disulfide interch 99.9 1.5E-26 5.1E-31 173.3 10.8 138 63-226 8-153 (156)
83 2h30_A Thioredoxin, peptide me 99.9 5.9E-27 2E-31 177.0 8.6 141 64-225 15-156 (164)
84 3mng_A Peroxiredoxin-5, mitoch 99.9 3.4E-26 1.2E-30 175.3 12.6 146 63-222 15-172 (173)
85 3tjj_A Peroxiredoxin-4; thiore 99.9 3.1E-26 1.1E-30 185.7 12.9 144 61-223 60-218 (254)
86 2ls5_A Uncharacterized protein 99.9 2.7E-28 9.3E-33 183.8 0.0 140 63-225 7-148 (159)
87 3uma_A Hypothetical peroxiredo 99.9 6.8E-27 2.3E-31 180.9 7.6 145 63-222 26-183 (184)
88 2v2g_A Peroxiredoxin 6; oxidor 99.9 6.3E-26 2.2E-30 181.6 12.3 149 63-224 3-164 (233)
89 1prx_A HORF6; peroxiredoxin, h 99.9 1.7E-25 5.7E-30 178.3 13.0 147 64-224 6-168 (224)
90 3keb_A Probable thiol peroxida 99.9 5.9E-25 2E-29 173.9 15.0 144 63-226 22-177 (224)
91 1xcc_A 1-Cys peroxiredoxin; un 99.9 1.9E-25 6.6E-30 177.5 11.9 148 63-224 3-165 (220)
92 2pwj_A Mitochondrial peroxired 99.9 2.3E-25 7.8E-30 170.4 10.4 135 63-212 7-156 (171)
93 1nm3_A Protein HI0572; hybrid, 99.9 3.3E-25 1.1E-29 178.4 11.2 135 63-212 3-145 (241)
94 1i5g_A Tryparedoxin II; electr 99.9 2.4E-25 8.2E-30 164.9 9.0 122 64-208 2-127 (144)
95 3a2v_A Probable peroxiredoxin; 99.9 9.6E-25 3.3E-29 176.0 12.0 143 64-224 6-161 (249)
96 3sbc_A Peroxiredoxin TSA1; alp 99.9 1.7E-24 5.8E-29 170.1 12.9 144 61-223 21-179 (216)
97 2lus_A Thioredoxion; CR-Trp16, 99.9 2.1E-26 7.2E-31 170.0 0.0 121 67-208 2-126 (143)
98 3s9f_A Tryparedoxin; thioredox 99.9 1.4E-25 4.7E-30 170.6 4.2 121 64-208 23-147 (165)
99 1o8x_A Tryparedoxin, TRYX, TXN 99.9 9.5E-25 3.2E-29 162.2 8.0 121 64-208 3-127 (146)
100 1o73_A Tryparedoxin; electron 99.9 1.7E-24 5.8E-29 160.1 7.5 121 64-208 3-127 (144)
101 3tue_A Tryparedoxin peroxidase 99.9 1.4E-23 4.6E-28 165.4 12.4 143 63-223 26-183 (219)
102 4eo3_A Bacterioferritin comigr 99.9 7.2E-23 2.5E-27 171.3 13.0 133 68-225 3-139 (322)
103 4f82_A Thioredoxin reductase; 99.8 9E-21 3.1E-25 144.6 10.1 132 64-210 11-158 (176)
104 2xhf_A Peroxiredoxin 5; oxidor 99.8 2E-19 6.9E-24 136.8 12.7 132 64-210 15-152 (171)
105 1xiy_A Peroxiredoxin, pfaop; a 99.8 1.6E-19 5.6E-24 138.9 9.7 131 64-209 2-153 (182)
106 2l57_A Uncharacterized protein 99.8 4.7E-19 1.6E-23 128.0 8.8 112 68-226 5-118 (126)
107 2fwh_A Thiol:disulfide interch 99.8 1.9E-19 6.5E-24 131.8 4.3 116 64-223 5-126 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.8 3.1E-18 1E-22 126.1 10.6 106 73-226 35-140 (141)
109 2ju5_A Thioredoxin disulfide i 99.7 4E-18 1.4E-22 127.8 7.6 123 64-226 25-153 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.7 1.3E-17 4.4E-22 121.0 9.6 108 65-222 20-127 (128)
111 3f9u_A Putative exported cytoc 99.7 1.1E-18 3.6E-23 133.0 1.8 124 81-226 39-167 (172)
112 3p2a_A Thioredoxin 2, putative 99.7 7.7E-17 2.6E-21 119.7 10.0 115 64-226 30-144 (148)
113 3fk8_A Disulphide isomerase; A 99.7 4.4E-16 1.5E-20 113.3 9.4 94 87-224 27-132 (133)
114 3zzx_A Thioredoxin; oxidoreduc 99.7 3.3E-16 1.1E-20 109.9 8.3 87 86-222 17-103 (105)
115 2dml_A Protein disulfide-isome 99.6 2.7E-15 9.3E-20 108.5 13.0 92 88-226 34-125 (130)
116 3qfa_C Thioredoxin; protein-pr 99.6 5.8E-16 2E-20 110.3 8.7 89 86-224 28-116 (116)
117 2l5l_A Thioredoxin; structural 99.6 1.1E-15 3.8E-20 111.8 9.9 91 88-226 37-127 (136)
118 2voc_A Thioredoxin; electron t 99.6 3.1E-16 1.1E-20 110.9 6.6 90 88-225 16-105 (112)
119 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.5E-15 5.2E-20 106.9 10.2 92 85-225 20-111 (111)
120 3tco_A Thioredoxin (TRXA-1); d 99.6 4.4E-16 1.5E-20 108.9 7.0 90 88-225 20-109 (109)
121 1z6n_A Hypothetical protein PA 99.6 1.1E-16 3.6E-21 121.6 4.1 82 83-209 48-129 (167)
122 1dby_A Chloroplast thioredoxin 99.6 2.2E-15 7.5E-20 105.2 10.5 90 88-225 18-107 (107)
123 3gix_A Thioredoxin-like protei 99.6 3.4E-16 1.2E-20 116.7 6.7 90 88-225 22-121 (149)
124 2trx_A Thioredoxin; electron t 99.6 1.4E-15 4.7E-20 106.4 9.0 90 88-225 19-108 (108)
125 3f3q_A Thioredoxin-1; His TAG, 99.6 1.4E-15 4.7E-20 107.1 9.0 88 87-224 22-109 (109)
126 2kuc_A Putative disulphide-iso 99.6 7E-16 2.4E-20 111.7 7.5 101 81-226 19-122 (130)
127 3die_A Thioredoxin, TRX; elect 99.6 1.1E-15 3.9E-20 106.3 8.3 89 88-224 18-106 (106)
128 3cxg_A Putative thioredoxin; m 99.6 2.2E-16 7.6E-21 115.3 4.7 104 73-226 24-130 (133)
129 1t00_A Thioredoxin, TRX; redox 99.6 1.8E-15 6.1E-20 106.6 9.0 90 88-225 22-111 (112)
130 2av4_A Thioredoxin-like protei 99.6 2.7E-15 9.3E-20 111.3 10.1 90 88-225 40-139 (160)
131 1nsw_A Thioredoxin, TRX; therm 99.6 1E-15 3.4E-20 106.5 7.5 89 88-224 16-104 (105)
132 1sen_A Thioredoxin-like protei 99.6 5.2E-17 1.8E-21 123.0 0.9 113 68-225 26-148 (164)
133 3d6i_A Monothiol glutaredoxin- 99.6 4E-15 1.4E-19 104.8 10.2 90 88-225 20-109 (112)
134 2o8v_B Thioredoxin 1; disulfid 99.6 3.7E-15 1.3E-19 108.1 10.2 90 88-225 39-128 (128)
135 1w4v_A Thioredoxin, mitochondr 99.6 3.3E-15 1.1E-19 106.8 9.8 90 88-225 30-119 (119)
136 4euy_A Uncharacterized protein 99.6 1.4E-15 4.7E-20 106.2 7.2 89 88-225 17-105 (105)
137 1thx_A Thioredoxin, thioredoxi 99.6 5.5E-15 1.9E-19 104.3 10.4 105 74-226 9-114 (115)
138 1x5d_A Protein disulfide-isome 99.6 3.7E-15 1.3E-19 108.1 9.7 106 74-226 9-118 (133)
139 3hz4_A Thioredoxin; NYSGXRC, P 99.6 1.8E-15 6E-20 111.4 8.0 91 88-226 23-113 (140)
140 1ep7_A Thioredoxin CH1, H-type 99.6 5.8E-15 2E-19 103.9 10.0 88 89-225 24-111 (112)
141 2dj1_A Protein disulfide-isome 99.6 3E-15 1E-19 109.7 8.8 105 74-226 19-125 (140)
142 3gnj_A Thioredoxin domain prot 99.6 5.5E-15 1.9E-19 103.7 9.7 90 88-225 21-110 (111)
143 2ppt_A Thioredoxin-2; thiredox 99.6 4.3E-15 1.5E-19 111.4 9.3 91 88-226 63-153 (155)
144 1xfl_A Thioredoxin H1; AT3G510 99.6 5E-15 1.7E-19 106.8 9.2 89 87-225 36-124 (124)
145 3qou_A Protein YBBN; thioredox 99.6 3.4E-15 1.2E-19 122.4 9.4 91 86-224 23-113 (287)
146 1x5e_A Thioredoxin domain cont 99.6 4.5E-15 1.5E-19 106.9 8.9 102 74-225 9-110 (126)
147 2e0q_A Thioredoxin; electron t 99.6 2.2E-15 7.7E-20 104.1 7.1 90 88-226 15-104 (104)
148 2vlu_A Thioredoxin, thioredoxi 99.6 9.5E-16 3.3E-20 109.7 5.2 113 64-226 7-121 (122)
149 1fb6_A Thioredoxin M; electron 99.6 4.7E-15 1.6E-19 103.0 8.6 102 75-224 3-105 (105)
150 2dj3_A Protein disulfide-isome 99.6 7.4E-15 2.5E-19 106.6 9.8 109 71-225 6-118 (133)
151 2djj_A PDI, protein disulfide- 99.6 9.3E-15 3.2E-19 104.3 10.1 104 73-225 8-117 (121)
152 3apq_A DNAJ homolog subfamily 99.6 1.1E-15 3.8E-20 120.0 5.6 110 69-226 94-203 (210)
153 1faa_A Thioredoxin F; electron 99.6 7.3E-15 2.5E-19 105.4 9.3 90 86-224 34-123 (124)
154 2i4a_A Thioredoxin; acidophIle 99.6 7.2E-15 2.5E-19 102.3 9.0 102 75-224 5-107 (107)
155 2qsi_A Putative hydrogenase ex 99.6 1.2E-14 4E-19 106.0 10.1 89 89-225 33-123 (137)
156 3d22_A TRXH4, thioredoxin H-ty 99.6 7.2E-15 2.5E-19 107.6 8.9 95 81-225 38-132 (139)
157 3m9j_A Thioredoxin; oxidoreduc 99.6 9.1E-15 3.1E-19 101.6 8.9 88 87-224 18-105 (105)
158 2j23_A Thioredoxin; immune pro 99.6 5.9E-15 2E-19 105.8 8.1 90 88-225 32-121 (121)
159 2yzu_A Thioredoxin; redox prot 99.6 1.1E-14 3.8E-19 101.5 8.9 91 88-226 17-107 (109)
160 2wz9_A Glutaredoxin-3; protein 99.6 1.4E-14 4.7E-19 108.2 9.3 89 88-226 31-119 (153)
161 2lst_A Thioredoxin; structural 99.3 2.9E-16 9.8E-21 113.8 0.0 103 79-226 9-117 (130)
162 1r26_A Thioredoxin; redox-acti 99.6 1.5E-14 5E-19 104.5 8.9 89 88-226 36-124 (125)
163 1qgv_A Spliceosomal protein U5 99.6 1.9E-14 6.5E-19 106.3 9.6 91 88-226 22-122 (142)
164 1gh2_A Thioredoxin-like protei 99.6 1.7E-14 5.6E-19 100.9 8.7 87 88-224 20-106 (107)
165 1v98_A Thioredoxin; oxidoreduc 99.5 2.8E-14 9.4E-19 104.8 10.2 105 74-226 35-139 (140)
166 1ti3_A Thioredoxin H, PTTRXH1; 99.5 3.2E-14 1.1E-18 100.0 9.6 89 87-225 24-112 (113)
167 2xc2_A Thioredoxinn; oxidoredu 99.5 1.6E-14 5.6E-19 102.6 8.0 89 85-224 29-117 (117)
168 2vim_A Thioredoxin, TRX; thior 99.5 2.4E-14 8.1E-19 99.2 8.5 89 86-224 16-104 (104)
169 2oe3_A Thioredoxin-3; electron 99.5 2.1E-14 7.1E-19 101.9 8.3 85 88-222 29-113 (114)
170 2qgv_A Hydrogenase-1 operon pr 99.5 1.5E-14 5.2E-19 105.7 7.6 91 88-225 33-125 (140)
171 1xwb_A Thioredoxin; dimerizati 99.5 4E-14 1.4E-18 98.3 9.4 89 87-224 18-106 (106)
172 2l6c_A Thioredoxin; oxidoreduc 99.5 2E-14 6.8E-19 101.3 7.8 88 88-224 18-105 (110)
173 1syr_A Thioredoxin; SGPP, stru 99.5 3.1E-14 1.1E-18 100.4 8.7 88 88-225 25-112 (112)
174 2vm1_A Thioredoxin, thioredoxi 99.5 4.3E-14 1.5E-18 100.2 9.1 89 88-226 27-115 (118)
175 3emx_A Thioredoxin; structural 99.5 1.4E-14 4.7E-19 105.9 6.4 95 91-226 33-127 (135)
176 3h79_A Thioredoxin-like protei 99.5 3.9E-14 1.3E-18 102.2 8.7 105 73-223 16-126 (127)
177 3dxb_A Thioredoxin N-terminall 99.5 5.1E-14 1.7E-18 111.5 9.4 104 74-225 14-118 (222)
178 1oaz_A Thioredoxin 1; immune s 99.5 3.2E-14 1.1E-18 102.4 7.2 89 88-224 20-122 (123)
179 1zma_A Bacterocin transport ac 99.5 4.7E-14 1.6E-18 100.4 7.8 90 88-221 28-117 (118)
180 3aps_A DNAJ homolog subfamily 99.5 2.2E-14 7.4E-19 102.6 6.0 91 88-226 20-114 (122)
181 2i1u_A Thioredoxin, TRX, MPT46 99.5 3.4E-14 1.2E-18 101.2 7.1 90 88-225 29-118 (121)
182 2f51_A Thioredoxin; electron t 99.5 4.6E-14 1.6E-18 100.7 7.4 102 74-224 5-112 (118)
183 3uvt_A Thioredoxin domain-cont 99.5 9.6E-14 3.3E-18 97.2 8.6 87 89-222 21-109 (111)
184 2dj0_A Thioredoxin-related tra 99.5 2E-14 6.8E-19 105.2 4.2 89 86-215 23-111 (137)
185 1mek_A Protein disulfide isome 99.5 2.1E-14 7.3E-19 101.8 3.7 92 88-226 23-118 (120)
186 3idv_A Protein disulfide-isome 99.5 1.4E-13 4.9E-18 109.5 8.7 104 74-225 17-122 (241)
187 2yj7_A LPBCA thioredoxin; oxid 99.2 5.1E-15 1.8E-19 102.6 0.0 103 74-224 3-106 (106)
188 1fo5_A Thioredoxin; disulfide 99.4 5.6E-13 1.9E-17 88.8 9.3 83 90-224 3-85 (85)
189 1nho_A Probable thioredoxin; b 99.4 3.8E-13 1.3E-17 89.6 8.2 83 91-225 3-85 (85)
190 2dbc_A PDCL2, unnamed protein 99.4 2.5E-13 8.4E-18 99.3 7.4 84 88-223 29-119 (135)
191 3ira_A Conserved protein; meth 99.4 6E-13 2E-17 101.2 9.7 88 80-206 30-120 (173)
192 3ph9_A Anterior gradient prote 99.4 1.6E-13 5.6E-18 102.2 5.4 77 87-210 42-120 (151)
193 1wmj_A Thioredoxin H-type; str 99.4 5.5E-14 1.9E-18 101.4 2.4 90 87-226 34-123 (130)
194 2es7_A Q8ZP25_salty, putative 99.4 2.8E-13 9.7E-18 100.0 6.2 89 89-226 34-126 (142)
195 1a8l_A Protein disulfide oxido 99.4 1.6E-12 5.3E-17 102.7 10.5 91 88-225 133-226 (226)
196 3evi_A Phosducin-like protein 99.4 8.4E-13 2.9E-17 94.3 7.5 81 89-221 23-110 (118)
197 3t58_A Sulfhydryl oxidase 1; o 99.4 1.9E-12 6.6E-17 114.4 9.8 109 74-226 14-128 (519)
198 3q6o_A Sulfhydryl oxidase 1; p 99.4 3.8E-12 1.3E-16 102.0 10.5 93 88-226 29-128 (244)
199 3dml_A Putative uncharacterize 99.3 1.5E-12 5.3E-17 92.2 4.7 94 88-226 17-111 (116)
200 2hls_A Protein disulfide oxido 99.3 1.9E-11 6.4E-16 98.1 10.9 111 64-225 103-226 (243)
201 1a0r_P Phosducin, MEKA, PP33; 99.3 7.4E-12 2.5E-16 100.4 8.4 74 88-211 132-205 (245)
202 3f8u_A Protein disulfide-isome 99.3 3.9E-12 1.3E-16 111.5 7.3 105 74-225 354-461 (481)
203 3iv4_A Putative oxidoreductase 99.3 1.5E-11 5.1E-16 86.2 7.9 86 89-220 24-111 (112)
204 3ed3_A Protein disulfide-isome 99.3 2.6E-11 8.8E-16 100.2 10.0 91 88-224 34-141 (298)
205 1wou_A Thioredoxin -related pr 99.2 1.2E-11 4E-16 88.7 6.6 45 86-131 21-72 (123)
206 2trc_P Phosducin, MEKA, PP33; 99.2 1.1E-11 3.8E-16 97.7 6.9 85 88-222 119-210 (217)
207 2r2j_A Thioredoxin domain-cont 99.2 1.4E-11 4.6E-16 105.2 7.9 105 74-225 7-117 (382)
208 3idv_A Protein disulfide-isome 99.2 6.2E-11 2.1E-15 94.2 11.1 90 88-225 146-237 (241)
209 1ilo_A Conserved hypothetical 99.2 5.8E-11 2E-15 77.5 8.6 37 92-129 2-38 (77)
210 1sji_A Calsequestrin 2, calseq 99.2 5.2E-11 1.8E-15 100.3 10.0 88 88-224 27-121 (350)
211 2ywm_A Glutaredoxin-like prote 99.2 7.5E-11 2.6E-15 93.3 8.7 86 88-225 135-220 (229)
212 2b5e_A Protein disulfide-isome 99.2 7.1E-11 2.4E-15 104.1 9.2 91 88-225 30-122 (504)
213 3apo_A DNAJ homolog subfamily 99.2 8.3E-11 2.8E-15 108.9 10.0 92 85-225 451-542 (780)
214 3f8u_A Protein disulfide-isome 99.2 9.4E-11 3.2E-15 102.7 9.6 90 88-225 20-109 (481)
215 3kp8_A Vkorc1/thioredoxin doma 99.2 1.4E-12 4.7E-17 91.4 -1.8 40 80-119 3-42 (106)
216 3qcp_A QSOX from trypanosoma b 99.2 1.4E-10 4.9E-15 100.6 10.2 59 74-132 25-92 (470)
217 2b5e_A Protein disulfide-isome 99.1 1.2E-10 4.1E-15 102.7 9.1 103 74-225 360-467 (504)
218 3uem_A Protein disulfide-isome 99.1 1.3E-10 4.4E-15 98.1 8.7 88 88-223 266-355 (361)
219 2dlx_A UBX domain-containing p 99.1 7.6E-10 2.6E-14 82.4 11.2 92 88-225 41-136 (153)
220 3gyk_A 27KDA outer membrane pr 99.1 1.6E-10 5.3E-15 87.7 7.2 135 79-226 12-174 (175)
221 3apo_A DNAJ homolog subfamily 99.1 6.6E-11 2.2E-15 109.6 5.9 91 88-226 674-768 (780)
222 3hd5_A Thiol:disulfide interch 99.0 1.2E-09 4.1E-14 84.3 9.0 43 88-131 24-66 (195)
223 1eej_A Thiol:disulfide interch 99.0 3.7E-10 1.3E-14 88.9 6.2 121 81-225 78-211 (216)
224 3us3_A Calsequestrin-1; calciu 99.0 4.8E-09 1.7E-13 88.9 13.2 90 88-225 29-124 (367)
225 3ga4_A Dolichyl-diphosphooligo 99.0 2.3E-09 7.9E-14 81.6 9.3 45 88-132 36-91 (178)
226 2djk_A PDI, protein disulfide- 99.0 1E-09 3.5E-14 79.6 6.5 89 88-225 22-115 (133)
227 3h93_A Thiol:disulfide interch 98.9 1.5E-09 5E-14 83.6 5.9 43 88-131 24-66 (192)
228 2znm_A Thiol:disulfide interch 98.8 5.6E-09 1.9E-13 80.4 7.1 43 88-131 21-63 (195)
229 2e7p_A Glutaredoxin; thioredox 98.8 1E-09 3.4E-14 77.4 2.4 38 88-131 18-55 (116)
230 1ttz_A Conserved hypothetical 98.8 4.1E-09 1.4E-13 70.8 5.3 75 93-225 3-77 (87)
231 1a8l_A Protein disulfide oxido 98.8 3.3E-08 1.1E-12 77.7 8.9 92 86-224 19-112 (226)
232 1v58_A Thiol:disulfide interch 98.7 2.8E-08 9.5E-13 79.4 6.6 132 80-225 88-233 (241)
233 2ywm_A Glutaredoxin-like prote 98.7 9.6E-08 3.3E-12 75.2 9.1 90 88-224 20-114 (229)
234 2rem_A Disulfide oxidoreductas 98.6 8.5E-08 2.9E-12 73.5 8.1 43 88-131 24-66 (193)
235 1t3b_A Thiol:disulfide interch 98.6 6.4E-08 2.2E-12 75.7 7.3 40 88-131 85-124 (211)
236 2fgx_A Putative thioredoxin; N 98.6 5.9E-08 2E-12 67.6 6.2 39 91-132 30-68 (107)
237 1z6m_A Conserved hypothetical 98.5 6E-07 2E-11 67.7 10.3 49 82-131 20-70 (175)
238 1hyu_A AHPF, alkyl hydroperoxi 98.5 4.1E-07 1.4E-11 80.5 10.6 82 88-222 116-197 (521)
239 3hz8_A Thiol:disulfide interch 98.5 1.7E-07 5.9E-12 72.2 6.8 43 88-131 23-65 (193)
240 1ego_A Glutaredoxin; electron 98.5 4E-07 1.4E-11 60.1 6.9 37 93-131 3-39 (85)
241 2c0g_A ERP29 homolog, windbeut 98.5 1.3E-06 4.5E-11 69.9 10.6 90 88-224 32-131 (248)
242 2k8s_A Thioredoxin; dimer, str 98.5 1.4E-07 4.9E-12 61.9 4.1 36 93-131 4-39 (80)
243 1wjk_A C330018D20RIK protein; 98.4 2.1E-07 7.1E-12 64.0 4.9 38 89-131 15-52 (100)
244 2qc7_A ERP31, ERP28, endoplasm 98.4 1.7E-06 5.8E-11 69.0 9.3 90 88-223 21-117 (240)
245 4h86_A Peroxiredoxin type-2; o 98.3 1.6E-06 5.6E-11 66.5 8.1 131 61-208 24-179 (199)
246 3l9v_A Putative thiol-disulfid 98.2 2.7E-06 9.4E-11 65.1 5.7 44 88-132 13-59 (189)
247 1h75_A Glutaredoxin-like prote 98.1 2.1E-06 7.1E-11 56.1 4.3 33 93-132 3-35 (81)
248 2hls_A Protein disulfide oxido 98.1 6.2E-06 2.1E-10 65.7 7.9 43 89-131 25-73 (243)
249 3uem_A Protein disulfide-isome 98.1 1.1E-05 3.7E-10 67.8 9.7 91 90-225 136-230 (361)
250 3kp9_A Vkorc1/thioredoxin doma 98.1 1.3E-06 4.3E-11 71.5 3.0 38 81-118 189-226 (291)
251 3gv1_A Disulfide interchange p 98.1 1.3E-05 4.3E-10 59.0 7.9 116 87-226 12-140 (147)
252 3feu_A Putative lipoprotein; a 98.1 2.7E-06 9.1E-11 65.0 4.1 40 89-131 22-61 (185)
253 1r7h_A NRDH-redoxin; thioredox 98.0 1.5E-05 5.1E-10 50.9 6.0 32 93-131 3-34 (75)
254 4dvc_A Thiol:disulfide interch 97.9 2.8E-05 9.7E-10 58.5 7.7 43 88-131 20-62 (184)
255 1un2_A DSBA, thiol-disulfide i 97.9 1.7E-06 5.8E-11 66.9 0.5 44 88-132 112-158 (197)
256 3c7m_A Thiol:disulfide interch 97.9 2.8E-05 9.5E-10 59.2 7.1 44 88-132 16-60 (195)
257 2ec4_A FAS-associated factor 1 97.8 0.00019 6.5E-09 54.4 10.6 111 86-225 52-168 (178)
258 2lqo_A Putative glutaredoxin R 97.7 0.00043 1.5E-08 46.5 10.1 78 93-224 6-83 (92)
259 3l9s_A Thiol:disulfide interch 97.7 0.00012 4.1E-09 56.0 7.4 43 88-131 20-65 (191)
260 2cq9_A GLRX2 protein, glutared 97.6 7.1E-05 2.4E-09 53.7 5.5 33 92-132 29-61 (130)
261 2hze_A Glutaredoxin-1; thiored 97.5 5.5E-05 1.9E-09 52.9 3.6 35 91-132 19-56 (114)
262 1kte_A Thioltransferase; redox 97.5 8.2E-05 2.8E-09 50.9 4.1 35 93-131 14-48 (105)
263 2ht9_A Glutaredoxin-2; thiored 97.5 9.1E-05 3.1E-09 54.3 4.4 33 91-131 50-82 (146)
264 3nzn_A Glutaredoxin; structura 97.4 0.00037 1.3E-08 47.6 6.3 33 92-131 23-55 (103)
265 3f4s_A Alpha-DSBA1, putative u 97.4 0.00053 1.8E-08 53.9 7.9 48 84-131 34-83 (226)
266 1fov_A Glutaredoxin 3, GRX3; a 97.3 0.0009 3.1E-08 43.1 6.8 32 93-131 3-34 (82)
267 3c1r_A Glutaredoxin-1; oxidize 97.2 0.00087 3E-08 47.0 6.5 36 93-132 27-63 (118)
268 3ic4_A Glutaredoxin (GRX-1); s 97.2 0.0012 4.2E-08 43.7 6.8 32 93-131 14-45 (92)
269 2khp_A Glutaredoxin; thioredox 97.1 0.0018 6.3E-08 42.8 6.7 32 93-131 8-39 (92)
270 3gha_A Disulfide bond formatio 97.0 0.0024 8.1E-08 49.2 7.8 47 85-131 25-73 (202)
271 3msz_A Glutaredoxin 1; alpha-b 97.0 0.0019 6.6E-08 42.2 6.4 21 93-113 6-26 (89)
272 2yan_A Glutaredoxin-3; oxidore 97.0 0.0023 7.7E-08 43.7 6.9 34 91-132 18-56 (105)
273 3bci_A Disulfide bond protein 97.0 0.0044 1.5E-07 46.6 8.8 44 88-131 10-55 (186)
274 4f9z_D Endoplasmic reticulum r 96.9 0.016 5.3E-07 45.2 11.8 92 91-225 133-225 (227)
275 3kzq_A Putative uncharacterize 96.7 0.042 1.4E-06 42.0 12.6 39 187-226 166-204 (208)
276 3qmx_A Glutaredoxin A, glutare 96.6 0.0047 1.6E-07 41.8 5.9 35 91-132 16-50 (99)
277 3rhb_A ATGRXC5, glutaredoxin-C 96.3 0.0058 2E-07 42.1 4.8 32 93-131 21-52 (113)
278 1wik_A Thioredoxin-like protei 96.1 0.022 7.4E-07 39.0 7.1 36 90-132 15-54 (109)
279 2klx_A Glutaredoxin; thioredox 96.0 0.009 3.1E-07 39.1 4.5 31 93-130 8-38 (89)
280 3ctg_A Glutaredoxin-2; reduced 95.2 0.033 1.1E-06 39.5 5.3 35 93-131 39-74 (129)
281 3h8q_A Thioredoxin reductase 3 95.1 0.038 1.3E-06 38.1 5.2 31 94-131 20-50 (114)
282 2in3_A Hypothetical protein; D 95.0 0.28 9.7E-06 37.3 10.6 39 187-226 173-211 (216)
283 2ct6_A SH3 domain-binding glut 94.1 0.24 8.3E-06 33.8 7.4 37 93-132 10-48 (111)
284 3tdg_A DSBG, putative uncharac 94.0 0.03 1E-06 45.0 2.9 39 88-129 146-184 (273)
285 3gn3_A Putative protein-disulf 93.9 0.067 2.3E-06 40.2 4.6 43 88-131 13-56 (182)
286 2axo_A Hypothetical protein AT 93.9 0.98 3.4E-05 36.1 11.5 38 91-131 44-81 (270)
287 1sji_A Calsequestrin 2, calseq 93.8 0.56 1.9E-05 38.6 10.5 42 90-131 246-288 (350)
288 2l4c_A Endoplasmic reticulum r 93.8 0.79 2.7E-05 32.0 9.8 37 88-129 38-74 (124)
289 1aba_A Glutaredoxin; electron 93.6 0.26 8.8E-06 31.8 6.6 32 93-131 2-37 (87)
290 2wci_A Glutaredoxin-4; redox-a 93.3 0.089 3E-06 37.6 4.1 34 91-131 36-73 (135)
291 3us3_A Calsequestrin-1; calciu 93.0 0.81 2.8E-05 38.1 10.3 42 90-131 248-290 (367)
292 1z3e_A Regulatory protein SPX; 93.0 0.26 8.8E-06 34.9 6.2 53 93-157 3-55 (132)
293 3gmf_A Protein-disulfide isome 92.9 0.28 9.5E-06 37.5 6.6 48 83-130 9-58 (205)
294 1t1v_A SH3BGRL3, SH3 domain-bi 92.8 0.32 1.1E-05 31.8 6.2 32 93-131 4-41 (93)
295 3fz4_A Putative arsenate reduc 92.7 0.25 8.5E-06 34.4 5.7 54 94-159 6-59 (120)
296 3q6o_A Sulfhydryl oxidase 1; p 92.6 0.52 1.8E-05 36.6 8.1 37 187-223 202-238 (244)
297 3l78_A Regulatory protein SPX; 92.5 0.34 1.2E-05 33.7 6.1 51 94-156 3-53 (120)
298 3l4n_A Monothiol glutaredoxin- 91.7 0.11 3.9E-06 36.6 2.9 21 93-113 16-36 (127)
299 3zyw_A Glutaredoxin-3; metal b 91.6 0.33 1.1E-05 33.2 5.2 35 89-131 15-54 (111)
300 3gkx_A Putative ARSC family re 91.3 0.27 9.2E-06 34.2 4.5 53 94-158 7-59 (120)
301 3gx8_A Monothiol glutaredoxin- 90.2 1.2 4.2E-05 30.8 7.1 35 90-131 16-57 (121)
302 1rw1_A Conserved hypothetical 89.5 0.28 9.5E-06 33.7 3.2 48 94-153 3-50 (114)
303 2wem_A Glutaredoxin-related pr 89.1 1 3.4E-05 31.2 5.9 35 90-131 20-59 (118)
304 3ipz_A Monothiol glutaredoxin- 88.8 0.77 2.6E-05 31.1 5.1 36 89-131 17-56 (109)
305 3rdw_A Putative arsenate reduc 87.7 0.72 2.5E-05 32.1 4.4 49 94-154 8-56 (121)
306 2kok_A Arsenate reductase; bru 87.2 0.45 1.5E-05 33.0 3.1 49 93-153 7-55 (120)
307 1s3c_A Arsenate reductase; ARS 87.2 0.76 2.6E-05 32.9 4.4 49 95-155 6-54 (141)
308 1nm3_A Protein HI0572; hybrid, 87.1 1.6 5.6E-05 33.6 6.7 34 91-131 170-203 (241)
309 2h8l_A Protein disulfide-isome 87.0 7.9 0.00027 30.0 10.7 34 191-225 195-230 (252)
310 1u6t_A SH3 domain-binding glut 87.0 3.7 0.00013 28.5 7.7 36 93-131 2-39 (121)
311 2g2q_A Glutaredoxin-2; thiored 83.9 1.2 4.3E-05 30.6 3.8 38 90-132 2-39 (124)
312 3bj5_A Protein disulfide-isome 80.6 13 0.00044 26.3 10.4 78 105-225 48-127 (147)
313 3f0i_A Arsenate reductase; str 80.3 0.81 2.8E-05 31.7 2.0 50 94-155 7-56 (119)
314 3gmf_A Protein-disulfide isome 77.3 2.4 8E-05 32.2 4.0 34 187-226 165-198 (205)
315 4f9z_D Endoplasmic reticulum r 71.9 20 0.00068 27.1 8.1 36 88-128 26-61 (227)
316 3ec3_A Protein disulfide-isome 69.8 31 0.0011 26.5 8.9 33 192-225 195-228 (250)
317 2r2j_A Thioredoxin domain-cont 67.6 33 0.0011 28.2 9.2 42 89-131 236-278 (382)
318 2jvx_A NF-kappa-B essential mo 65.4 0.83 2.8E-05 23.0 -0.7 21 100-120 5-25 (28)
319 3gl5_A Putative DSBA oxidoredu 62.8 8.1 0.00028 29.9 4.2 35 187-226 180-214 (239)
320 2wul_A Glutaredoxin related pr 62.0 21 0.00072 24.5 5.7 35 90-131 20-59 (118)
321 2jad_A Yellow fluorescent prot 60.4 3.3 0.00011 34.5 1.6 16 94-109 264-279 (362)
322 3ghf_A Septum site-determining 57.8 15 0.0005 25.3 4.3 54 87-155 45-98 (120)
323 2a4h_A Selenoprotein SEP15; re 53.5 14 0.00047 25.7 3.5 35 191-225 62-97 (126)
324 3t58_A Sulfhydryl oxidase 1; o 53.2 58 0.002 28.3 8.4 23 187-209 202-224 (519)
325 3mjh_B Early endosome antigen 53.2 1.8 6.2E-05 22.9 -0.8 20 100-119 7-26 (34)
326 3ktb_A Arsenical resistance op 52.2 51 0.0017 22.1 8.1 35 98-132 13-53 (106)
327 2k49_A UPF0339 protein SO_3888 49.7 41 0.0014 23.0 5.5 35 192-226 66-100 (118)
328 4ev1_A Anabena TIC22; TIC22 fo 48.5 96 0.0033 24.3 13.4 57 68-131 13-86 (252)
329 3kgk_A Arsenical resistance op 46.6 65 0.0022 21.8 7.9 35 98-132 10-50 (110)
330 2x8g_A Thioredoxin glutathione 46.1 20 0.00069 31.5 4.4 55 93-159 20-75 (598)
331 3bid_A UPF0339 protein NMB1088 46.0 47 0.0016 20.0 5.3 34 192-225 13-46 (64)
332 4gxt_A A conserved functionall 45.2 1.3E+02 0.0045 24.9 9.1 44 104-156 219-262 (385)
333 2imf_A HCCA isomerase, 2-hydro 44.8 19 0.00065 26.7 3.5 27 93-119 3-29 (203)
334 3gl5_A Putative DSBA oxidoredu 44.2 39 0.0013 25.9 5.3 42 89-130 1-43 (239)
335 2v2f_A Penicillin binding prot 44.0 12 0.00041 17.9 1.5 15 193-207 6-20 (26)
336 3ec3_A Protein disulfide-isome 43.7 1.1E+02 0.0036 23.4 11.0 36 89-128 25-60 (250)
337 2h8l_A Protein disulfide-isome 42.7 1.1E+02 0.0037 23.3 10.5 37 89-129 24-60 (252)
338 3gn3_A Putative protein-disulf 42.6 12 0.00042 27.5 2.1 31 187-220 151-181 (182)
339 2a2p_A Selenoprotein M, SELM p 41.3 25 0.00087 24.5 3.4 32 191-222 56-88 (129)
340 2imf_A HCCA isomerase, 2-hydro 39.2 18 0.00062 26.8 2.6 32 187-224 164-195 (203)
341 2k8e_A UPF0339 protein YEGP; p 38.1 65 0.0022 22.4 5.1 35 192-226 82-116 (130)
342 1xhj_A Nitrogen fixation prote 37.3 47 0.0016 21.4 4.0 34 78-112 26-59 (88)
343 1pn0_A Phenol 2-monooxygenase; 32.3 2.7E+02 0.0093 24.8 14.8 37 63-99 479-519 (665)
344 3vhs_A ATPase wrnip1; zinc fin 32.2 3 0.0001 20.3 -1.8 11 100-110 8-18 (29)
345 1r4w_A Glutathione S-transfera 31.7 36 0.0012 25.6 3.2 36 91-129 6-41 (226)
346 2k7i_A UPF0339 protein ATU0232 30.5 72 0.0025 20.3 3.9 34 192-225 35-68 (83)
347 3pdk_A Phosphoglucosamine muta 29.8 1.5E+02 0.0053 25.2 7.2 43 122-167 218-265 (469)
348 5nul_A Flavodoxin; electron tr 28.1 48 0.0016 22.5 3.2 54 87-148 77-132 (138)
349 1th5_A NIFU1; iron-sulfur clus 28.0 72 0.0025 19.8 3.6 36 78-114 23-59 (74)
350 3ga8_A HTH-type transcriptiona 27.4 47 0.0016 20.6 2.7 35 86-120 23-64 (78)
351 3i3w_A Phosphoglucosamine muta 26.5 1.9E+02 0.0064 24.4 7.1 43 122-167 196-243 (443)
352 2dkh_A 3-hydroxybenzoate hydro 25.9 3.4E+02 0.012 23.9 14.0 43 63-105 467-513 (639)
353 3v67_A Sensor protein CPXA; PA 22.6 47 0.0016 23.4 2.2 16 192-207 56-71 (138)
354 3cwf_A Alkaline phosphatase sy 22.2 47 0.0016 22.1 2.1 15 193-207 50-64 (122)
355 4g9p_A 4-hydroxy-3-methylbut-2 22.1 70 0.0024 26.9 3.4 33 192-225 367-399 (406)
356 1s3a_A NADH-ubiquinone oxidore 20.9 1.8E+02 0.0062 18.9 4.9 36 191-226 65-100 (102)
No 1
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=227.30 Aligned_cols=161 Identities=39% Similarity=0.676 Sum_probs=141.3
Q ss_pred cCCCccCCeEEecCC-CCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~-G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+..+|+|+++|.+ |+.++|++|+||+|||+|||+||++|+ ++|.|++++++|+++|++||+|++|+|+.+++++.+
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH
Confidence 567789999999999 999999999999999999999999999 999999999999999999999999998888888999
Q ss_pred HHHHHHHh------hCCCCccceeeeccCCCCchhhHHHhhhcCCC---CC------------CCccccceeEEEECCCC
Q 027134 143 QIQEFACT------RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGG---LF------------GDSIKWNFSKFLVDKEG 201 (227)
Q Consensus 143 ~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lid~~G 201 (227)
++++|+ + +++++||++.+.|.++....++|+++....++ .. +..+.+.|++||||++|
T Consensus 109 ~i~~f~-~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G 187 (215)
T 2i3y_A 109 EILPGL-KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDG 187 (215)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHH-HhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCC
Confidence 999999 5 88999999976677777777888877543221 11 12567789999999999
Q ss_pred cEEEecCCCCChhhHHHHHHHHhhh
Q 027134 202 NVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 202 ~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
+|++++.|..+++++++.|+++|++
T Consensus 188 ~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 188 IPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9999999988899999999999975
No 2
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=3e-34 Score=218.34 Aligned_cols=164 Identities=49% Similarity=0.887 Sum_probs=141.9
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
.++|..+|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.++.+++++.+
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 84 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEA 84 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred ccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHH
Confidence 37899999999999999999999999999999999999999999999999999999998999999999987777888899
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
.+++|+.++++++||++.+.|.++.....+|+++.....+..+..+.++|++||||++|+|++++.|..+++++.+.|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 164 (169)
T 2v1m_A 85 EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIME 164 (169)
T ss_dssp HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHH
Confidence 99999326779999998655777766666777765544444433478899999999999999999998889999999999
Q ss_pred Hhhh
Q 027134 223 LLET 226 (227)
Q Consensus 223 lL~~ 226 (227)
+|++
T Consensus 165 ll~~ 168 (169)
T 2v1m_A 165 LLEK 168 (169)
T ss_dssp HHHC
T ss_pred Hhcc
Confidence 9875
No 3
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=2.2e-34 Score=227.39 Aligned_cols=163 Identities=40% Similarity=0.664 Sum_probs=141.1
Q ss_pred cCCCccCCeEEecCC-CCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~-G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
+.+..+|+|+++|.+ |+.+++++++||+|||+|||+|||+|+.++|.|++++++|+++|++|++|++|+++.+++++.+
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHH
Confidence 678899999999999 9999999999999999999999999999999999999999998999999999987778888899
Q ss_pred HHHHHHH-----hhCCCCccceeeeccCCCCchhhHHHhhhcCCCC-------C------------CCccccceeEEEEC
Q 027134 143 QIQEFAC-----TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGL-------F------------GDSIKWNFSKFLVD 198 (227)
Q Consensus 143 ~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~------------~~~i~~~P~~~lid 198 (227)
++++|++ ++++++||++.+.+.++....++|.++....++. . ++++.++|++||||
T Consensus 101 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID 180 (208)
T 2f8a_A 101 EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 180 (208)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEc
Confidence 9999994 2889999999777777776667887765432211 0 12578899999999
Q ss_pred CCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 199 KEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 199 ~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
++|+|+.++.|..+++++++.|+++|++
T Consensus 181 ~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 181 PDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp TTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999864
No 4
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=220.83 Aligned_cols=162 Identities=51% Similarity=0.909 Sum_probs=141.2
Q ss_pred cccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
...+|+.+|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|.++.+++++.
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~ 101 (185)
T 2gs3_A 22 SMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSN 101 (185)
T ss_dssp GGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCH
T ss_pred hccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCH
Confidence 34789999999999999999999999999999999999999999999999999999999899999999998777778889
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCC--CCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG--GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKD 219 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (227)
+++++|+ ++++++||++.+.|.++....++|+++....+ +..+..++++|++||||++|+|++++.|..+++++++.
T Consensus 102 ~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 180 (185)
T 2gs3_A 102 EEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKD 180 (185)
T ss_dssp HHHHHHH-HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGG
T ss_pred HHHHHHH-HHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHH
Confidence 9999999 78899999986557677666667877654332 33333577899999999999999999998888899999
Q ss_pred HHHHh
Q 027134 220 IKKLL 224 (227)
Q Consensus 220 i~~lL 224 (227)
|+++|
T Consensus 181 i~~lL 185 (185)
T 2gs3_A 181 LPHYF 185 (185)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 98875
No 5
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=222.71 Aligned_cols=161 Identities=37% Similarity=0.625 Sum_probs=138.1
Q ss_pred cCCCccCCeEEecCC-CCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~-G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
.....+|+|+++|.+ |+.+++++|+||+|||+|||+|||+| .++|.|++++++|+++|++||+|++|+|+.+++++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 445689999999999 99999999999999999999999999 7999999999999999999999999988888888999
Q ss_pred HHHHHHHh------hCCCCccceeeeccCCCCchhhHHHhhhcCCC---CC------------CCccccceeEEEECCCC
Q 027134 143 QIQEFACT------RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGG---LF------------GDSIKWNFSKFLVDKEG 201 (227)
Q Consensus 143 ~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lid~~G 201 (227)
++++|+ + +++++||++.+.|.++....++|.++....++ .. ++.+.|.|++||||++|
T Consensus 91 ~i~~f~-~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G 169 (207)
T 2r37_A 91 EILPTL-KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDG 169 (207)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHH-HhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCC
Confidence 999999 5 88999999976677777677788877543221 11 12467789999999999
Q ss_pred cEEEecCCCCChhhHHHHHHHHhhh
Q 027134 202 NVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 202 ~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
+|++++.|..+++++++.|+++|++
T Consensus 170 ~i~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 170 IPIMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhh
Confidence 9999999988899999999999864
No 6
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=6.5e-34 Score=220.05 Aligned_cols=162 Identities=51% Similarity=0.930 Sum_probs=141.0
Q ss_pred cccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..++|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.++.+++++.
T Consensus 20 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~ 99 (183)
T 2obi_A 20 DWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSN 99 (183)
T ss_dssp CGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred CCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCH
Confidence 34889999999999999999999999999999999999999999999999999999999899999999998777788899
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCC--CCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG--GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKD 219 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (227)
+.+++|+ ++++++||++.+.|.++....++|+++....+ +..+..+.++|++||||++|+|++++.|..+++++++.
T Consensus 100 ~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 178 (183)
T 2obi_A 100 EEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKD 178 (183)
T ss_dssp HHHHHHH-HTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTT
T ss_pred HHHHHHH-HHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHH
Confidence 9999999 78899999986557777766677877755433 33343578899999999999999999998888888887
Q ss_pred HHHHh
Q 027134 220 IKKLL 224 (227)
Q Consensus 220 i~~lL 224 (227)
|+++|
T Consensus 179 i~~lL 183 (183)
T 2obi_A 179 LPHYF 183 (183)
T ss_dssp SGGGC
T ss_pred HHHhC
Confidence 77664
No 7
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=2.5e-34 Score=223.32 Aligned_cols=161 Identities=48% Similarity=0.841 Sum_probs=142.1
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
+.+.++|+|+++|.+|+.+++++++||+|||+||++|||+|+.++|.|++++++|++++++|++|++|.++.+++++.++
T Consensus 21 ~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~ 100 (187)
T 3dwv_A 21 SAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEE 100 (187)
T ss_dssp TTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTH
T ss_pred cCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccce---eEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF---SKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P---~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
+++|++++++++||++.+.|.++.....+|+++....++.. ++..+| ++||||++|+|++++.|..+++++++.|
T Consensus 101 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~--~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i 178 (187)
T 3dwv_A 101 IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL--ATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKL 178 (187)
T ss_dssp HHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB--SSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCcc--CCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHH
Confidence 99999546799999997678888878888887766554333 345567 9999999999999999999999999999
Q ss_pred HHHhhh
Q 027134 221 KKLLET 226 (227)
Q Consensus 221 ~~lL~~ 226 (227)
+++|+.
T Consensus 179 ~~lL~~ 184 (187)
T 3dwv_A 179 IPLLGS 184 (187)
T ss_dssp HHHC--
T ss_pred HHHHhc
Confidence 999864
No 8
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=1.5e-33 Score=214.69 Aligned_cols=164 Identities=72% Similarity=1.247 Sum_probs=136.8
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
++|..+|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.++.+++++.+.
T Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 86 (170)
T 2p5q_A 7 KNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQ 86 (170)
T ss_dssp ---CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHH
T ss_pred CCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHH
Confidence 78999999999999999999999999999999999999999999999999999999989999999999877777889999
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
+++|++++++++||++...|.++.....+|+++.....+..+.++.+.|++||||++|+|++++.|..+++++++.|+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 87 ITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQL 166 (170)
T ss_dssp HHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred HHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHH
Confidence 99999437899999986567777766677766543211111113344449999999999999999998899999999999
Q ss_pred hhhC
Q 027134 224 LETA 227 (227)
Q Consensus 224 L~~~ 227 (227)
|+++
T Consensus 167 l~~s 170 (170)
T 2p5q_A 167 LEIS 170 (170)
T ss_dssp TTCC
T ss_pred hhcC
Confidence 9763
No 9
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=3e-33 Score=215.81 Aligned_cols=155 Identities=40% Similarity=0.695 Sum_probs=136.1
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
...|..+|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|.++..++++.+
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~ 91 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSK 91 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHH
T ss_pred cCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999988888889999
Q ss_pred HHHHHHHhh-CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCcccccee----EEEECCCCcEEEecCCCCChhhHH
Q 027134 143 QIQEFACTR-FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFS----KFLVDKEGNVVERYAPTTSPLSIE 217 (227)
Q Consensus 143 ~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~----~~lid~~G~I~~~~~g~~~~~~l~ 217 (227)
++++|+ ++ ++++||++...|..+......|.++... ...+|+ +||||++|+|++++.|..+++.++
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 162 (180)
T 3kij_A 92 EVESFA-RKNYGVTFPIFHKIKILGSEGEPAFRFLVDS--------SKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIR 162 (180)
T ss_dssp HHHHHH-HHHHCCCSCBBCCCCCSSTTCCHHHHHHHHH--------HTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTH
T ss_pred HHHHHH-HHhcCCCCceeeeeeccCccccHHHHHHHhc--------CCCCccccceEEEECCCCCEEEEECCCCCHHHHH
Confidence 999999 55 8999999866667776666677665432 123566 999999999999999999888888
Q ss_pred HHHHHHhhh
Q 027134 218 KDIKKLLET 226 (227)
Q Consensus 218 ~~i~~lL~~ 226 (227)
+.|+++|++
T Consensus 163 ~~i~~lL~~ 171 (180)
T 3kij_A 163 PDIAALVRQ 171 (180)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887753
No 10
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=216.18 Aligned_cols=152 Identities=38% Similarity=0.685 Sum_probs=130.8
Q ss_pred cccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..++|+.+|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|.++.+++++.
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~ 101 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSN 101 (181)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCH
Confidence 34889999999999999999999999999999999999999999999999999999999899999999998777777889
Q ss_pred HHHHHHHHhh-CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccce-------eEEEECCCCcEEEecCCCCCh
Q 027134 142 EQIQEFACTR-FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF-------SKFLVDKEGNVVERYAPTTSP 213 (227)
Q Consensus 142 ~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P-------~~~lid~~G~I~~~~~g~~~~ 213 (227)
+.+++|+ ++ ++++||++.+.|.++.....+|++ .+..+| ++||||++|+|++++.|..++
T Consensus 102 ~~~~~~~-~~~~~~~~p~~~~~d~~g~~~~~~~~~-----------~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~ 169 (181)
T 2p31_A 102 KEIESFA-RRTYSVSFPMFSKIAVTGTGAHPAFKY-----------LAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSV 169 (181)
T ss_dssp HHHHHHH-HHHHCCCSCBBCCCCCSSTTSCHHHHH-----------HHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCH
T ss_pred HHHHHHH-HhhcCCCceeEeecccCCccchhhhhh-----------hhhcCCCccccceeEEEEcCCCCEEEEeCCCCCH
Confidence 9999999 55 899999986556666655666654 344467 999999999999999998889
Q ss_pred hhHHHHHHHHhh
Q 027134 214 LSIEKDIKKLLE 225 (227)
Q Consensus 214 ~~l~~~i~~lL~ 225 (227)
+++++.|+++|+
T Consensus 170 ~~l~~~i~~ll~ 181 (181)
T 2p31_A 170 EEVRPQITALVR 181 (181)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHHHhC
Confidence 899999998874
No 11
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=3e-32 Score=212.01 Aligned_cols=158 Identities=51% Similarity=0.875 Sum_probs=137.5
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
+.|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.++.+++++.+.
T Consensus 23 ~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~ 102 (190)
T 2vup_A 23 SAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEE 102 (190)
T ss_dssp -CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHH
T ss_pred CCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHH
Confidence 77999999999999999999999999999999999999999999999999999999989999999999877778889999
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccce------eEEEECCCCcEEEecCCCCChhhHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF------SKFLVDKEGNVVERYAPTTSPLSIE 217 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P------~~~lid~~G~I~~~~~g~~~~~~l~ 217 (227)
+++|+.++++++||++.+.|.++.....+|+++..... ++.++| ++||||++|+|++++.|..+++++.
T Consensus 103 ~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~-----~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 177 (190)
T 2vup_A 103 IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKP-----GILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIE 177 (190)
T ss_dssp HHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSC-----CGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHH
T ss_pred HHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcC-----CcCCCccccccceEEEECCCCcEEEEECCCCCHHHHH
Confidence 99998346799999986567777766667776643322 344455 9999999999999999998899999
Q ss_pred HHHHHHhhh
Q 027134 218 KDIKKLLET 226 (227)
Q Consensus 218 ~~i~~lL~~ 226 (227)
+.|+++|++
T Consensus 178 ~~i~~ll~~ 186 (190)
T 2vup_A 178 KKLIPLLES 186 (190)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999999875
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-32 Score=208.54 Aligned_cols=157 Identities=46% Similarity=0.813 Sum_probs=120.7
Q ss_pred CCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHH
Q 027134 65 SKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI 144 (227)
Q Consensus 65 ~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~ 144 (227)
.+..+|+|+++|.+|+.+++++++||++||+||++||++|+ ++|.|++++++|++++++|++|++|.++.+++++.+.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 46789999999999999999999999999999999999999 99999999999999899999999987766777788899
Q ss_pred HHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccce------eEEEECCCCcEEEecCCCCChhhHHH
Q 027134 145 QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF------SKFLVDKEGNVVERYAPTTSPLSIEK 218 (227)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P------~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (227)
++|++++++++||++.+.|.++....++|+++.... +++.++| ++||||++|+|++++.|..+++++++
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~-----~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 161 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQK-----SGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSE 161 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHS-----CCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHH
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhcc-----CCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 999845679999999665666666677776654321 1566678 99999999999999999888999999
Q ss_pred HHHHHhhhC
Q 027134 219 DIKKLLETA 227 (227)
Q Consensus 219 ~i~~lL~~~ 227 (227)
.|+++|+++
T Consensus 162 ~i~~ll~~~ 170 (171)
T 3cmi_A 162 TIEELLKEV 170 (171)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhc
Confidence 999999763
No 13
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.97 E-value=1.8e-31 Score=200.92 Aligned_cols=148 Identities=18% Similarity=0.291 Sum_probs=126.0
Q ss_pred CCCccCCeEEecC--CCCeeecCCCCCCEEEEEEecCCCCcchHh-HHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 65 SKTSVHDFSVKDA--KGQDVDLSIYKGKLLLIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 65 ~g~~~p~f~l~~~--~G~~v~l~~~~gk~vlv~F~aswC~~C~~~-~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
.|..+|+|++.+. +|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.|++|++| +...+.++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCCH
Confidence 5889999999994 889999999999999999999999999997 999999999999888999999987 222334689
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCC-chhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDN-AAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
+.+++|+ ++++++||++ .|..+.. ...+.+.+ ++.++|++||||++|+|++++.|..+.+++.+.|
T Consensus 81 ~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 147 (158)
T 3eyt_A 81 ISLKAFL-HEYRIKFPVG--VDQPGDGAMPRTMAAY----------QMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEI 147 (158)
T ss_dssp HHHHHHH-HHTTCCSCEE--EECCCSSSSCHHHHHT----------TCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHH-HHcCCCceEE--EcCccchhhHHHHHHc----------CCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHH
Confidence 9999999 7889999988 4444421 11233332 7888999999999999999999999999999999
Q ss_pred HHHhhh
Q 027134 221 KKLLET 226 (227)
Q Consensus 221 ~~lL~~ 226 (227)
+++|++
T Consensus 148 ~~ll~~ 153 (158)
T 3eyt_A 148 ATLLGE 153 (158)
T ss_dssp HHHHTS
T ss_pred HHHhcc
Confidence 999975
No 14
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1e-30 Score=195.39 Aligned_cols=139 Identities=27% Similarity=0.368 Sum_probs=122.6
Q ss_pred ccCCCccCCeEEecCCCCeeecC--CCCCCEEEEEEecCCCCc--chHhHHHHHHHHHHH-hcCCcEEEEEeCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLS--IYKGKLLLIVNVASQCGL--TNSNYTELSQLYDKY-KNQGLEILAFPCNQFGAQE 137 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~--~~~gk~vlv~F~aswC~~--C~~~~~~l~~l~~~~-~~~~~~vl~Vs~D~~~~~~ 137 (227)
..+|+++|+|++.|.+|+.++++ +++||++||+||++||++ |+.++|.|++++++| ++++++|++|++|.
T Consensus 5 l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~----- 79 (150)
T 3fw2_A 5 SEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV----- 79 (150)
T ss_dssp TSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS-----
T ss_pred ccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC-----
Confidence 38899999999999999999999 999999999999999999 999999999999999 88889999999995
Q ss_pred CCCHHHHHHHHHhhCCCCccceeeeccCC--CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhh
Q 027134 138 PGDNEQIQEFACTRFKAEFPIFDKVDVNG--DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLS 215 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~ 215 (227)
+.+.+++|+ ++++++|+.+ .|..+ ......| ++.++|++||||++|+|++++. +.++
T Consensus 80 --~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~---~~~~ 138 (150)
T 3fw2_A 80 --DKQQWKDAI-KRDTLDWEQV--CDFGGLNSEVAKQY-------------SIYKIPANILLSSDGKILAKNL---RGEE 138 (150)
T ss_dssp --CHHHHHHHH-HHTTCCSEEE--CCSCGGGCHHHHHT-------------TCCSSSEEEEECTTSBEEEESC---CHHH
T ss_pred --CHHHHHHHH-HHhCCCceEE--EcCcccchHHHHHc-------------CCCccCeEEEECCCCEEEEccC---CHHH
Confidence 678999999 7889999988 34322 2233333 7888999999999999999986 6888
Q ss_pred HHHHHHHHhhhC
Q 027134 216 IEKDIKKLLETA 227 (227)
Q Consensus 216 l~~~i~~lL~~~ 227 (227)
+++.|+++|+++
T Consensus 139 l~~~l~~ll~~a 150 (150)
T 3fw2_A 139 LKKKIENIVEEA 150 (150)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 999999999864
No 15
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.97 E-value=5.2e-31 Score=198.61 Aligned_cols=151 Identities=12% Similarity=0.226 Sum_probs=128.5
Q ss_pred cCCCccCCeEEec-CCCCeeecCCCCCCEEEEEEecCCCCcchHh-HHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDFSVKD-AKGQDVDLSIYKGKLLLIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f~l~~-~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~-~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
-.|.++|+|++.+ .+|+.+++++++||++||+||++||++|+.+ +|.|++++++|++++++|++|++| +.+.+.++.
T Consensus 4 ~~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 82 (160)
T 3lor_A 4 LDNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTP 82 (160)
T ss_dssp CTTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred cCCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCH
Confidence 4689999999999 8999999999999999999999999999996 999999999999989999999997 333344689
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIK 221 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~ 221 (227)
+.+++|+ ++++++||++.+.+........+.+.+ ++.++|++||||++|+|++++.|..+.+.+++.|+
T Consensus 83 ~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 151 (160)
T 3lor_A 83 EALKVFI-DEFGIKFPVAVDMPREGQRIPSTMKKY----------RLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLG 151 (160)
T ss_dssp HHHHHHH-HHTTCCSCEEEECCCTTCSSCHHHHHT----------TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCCcEEECCccccchhhhHHHhc----------ccCccceEEEECCCCcEEEEecCcCCHHHHHHHHH
Confidence 9999999 788999998843333222222233333 78889999999999999999999999999999999
Q ss_pred HHhhh
Q 027134 222 KLLET 226 (227)
Q Consensus 222 ~lL~~ 226 (227)
++|++
T Consensus 152 ~ll~~ 156 (160)
T 3lor_A 152 SLLSE 156 (160)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 99975
No 16
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=5.2e-31 Score=199.15 Aligned_cols=146 Identities=22% Similarity=0.282 Sum_probs=110.7
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
++|+++|+|+++|.+|+.+++++++||++||+|| ++|||+|+.++|.|++++++++++++++++||.| +.+
T Consensus 5 ~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~~~ 76 (157)
T 4g2e_A 5 EIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------PPF 76 (157)
T ss_dssp CTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------CHH
T ss_pred CCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------chh
Confidence 8899999999999999999999999999999999 9999999999999999999999999999999988 788
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC-----CChhhHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-----TSPLSIE 217 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~-----~~~~~l~ 217 (227)
.+++|+ ++++++||++ .|.++. +.+.|+..... ++..+ .....|++||||++|+|++++.+. .+.+++.
T Consensus 77 ~~~~~~-~~~~~~~p~l--~D~~~~-v~~~ygv~~~~-~~~~~-~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil 150 (157)
T 4g2e_A 77 SNKAFK-EHNKLNFTIL--SDYNRE-VVKKYNVAWEF-PALPG-YVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIE 150 (157)
T ss_dssp HHHHHH-HHTTCCSEEE--ECTTSH-HHHHTTCEEEC-TTSTT-CEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHH
T ss_pred HHHHHH-HHcCCcEEEE--EcCCcH-HHHHcCCcccc-ccCCC-cceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHH
Confidence 999998 7889999998 555543 44445332111 11111 334579999999999999986543 2345566
Q ss_pred HHHHHH
Q 027134 218 KDIKKL 223 (227)
Q Consensus 218 ~~i~~l 223 (227)
+.|+.|
T Consensus 151 ~~l~~L 156 (157)
T 4g2e_A 151 KVVKSL 156 (157)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 666543
No 17
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.97 E-value=5.4e-30 Score=196.04 Aligned_cols=157 Identities=16% Similarity=0.301 Sum_probs=123.2
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCC-cchHhHHHHHHHHHHHhcC--CcEEEEEeCCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCG-LTNSNYTELSQLYDKYKNQ--GLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~-~C~~~~~~l~~l~~~~~~~--~~~vl~Vs~D~~~~~~~~~ 140 (227)
..|.++|+|+|+|.+|+.+++++++||++||+||+|||| +|+.+++.|.+++++++++ ++++|+||+| ++.|+
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~Dt 82 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLDK 82 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTCC
T ss_pred CCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC----ccccc
Confidence 578999999999999999999999999999999999998 7999999999999999764 4999999999 67789
Q ss_pred HHHHHHHHHhhCCCCccceeeecc-CCCCchhhHHH-hhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC--ChhhH
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDV-NGDNAAPLYKH-LKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLSI 216 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~-~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~--~~~~l 216 (227)
.+.+++|+ ++++.+++.|..... ..+.....+.. +........++.+.|.|++||||++|+|+.++.|.. +.+++
T Consensus 83 p~~l~~y~-~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l 161 (170)
T 4hde_A 83 PENLKAFI-QKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDI 161 (170)
T ss_dssp HHHHHHHH-TTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHH
T ss_pred HHHHHHHH-HHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHH
Confidence 99999999 788888776533221 11112222221 212222223357889999999999999999887643 45678
Q ss_pred HHHHHHHhh
Q 027134 217 EKDIKKLLE 225 (227)
Q Consensus 217 ~~~i~~lL~ 225 (227)
.+.|++||+
T Consensus 162 ~~~ik~Lle 170 (170)
T 4hde_A 162 IRDMKRLAE 170 (170)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 888988874
No 18
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.97 E-value=5.9e-31 Score=195.22 Aligned_cols=133 Identities=13% Similarity=0.199 Sum_probs=108.5
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|+.+|+|++ +.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|. +.+
T Consensus 7 l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~-------~~~ 78 (143)
T 4fo5_A 7 VNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDE-------KES 78 (143)
T ss_dssp SSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS-------CHH
T ss_pred cCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC-------CHH
Confidence 488999999999 999999999999999999999999999999999999999999998899999999985 688
Q ss_pred HHHHHHHhhCCCCc-cceeeeccCCC--CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHH
Q 027134 143 QIQEFACTRFKAEF-PIFDKVDVNGD--NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKD 219 (227)
Q Consensus 143 ~~~~~~~~~~~~~~-~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (227)
.+++++ ++++++| +.+ .|..+. .....| ++.++|++||||++|+|+++..+ .+++++.
T Consensus 79 ~~~~~~-~~~~~~~~~~~--~d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~ 139 (143)
T 4fo5_A 79 IFTETV-KIDKLDLSTQF--HEGLGKESELYKKY-------------DLRKGFKNFLINDEGVIIAANVT---PEKLTEI 139 (143)
T ss_dssp HHHHHH-HHHTCCGGGEE--ECTTGGGSHHHHHT-------------TGGGCCCEEEECTTSBEEEESCC---HHHHHHH
T ss_pred HHHHHH-HHhCCCCceee--ecccccchHHHHHc-------------CCCCCCcEEEECCCCEEEEccCC---HHHHHHH
Confidence 999999 6779999 566 343322 233333 88889999999999999999764 5666666
Q ss_pred HHH
Q 027134 220 IKK 222 (227)
Q Consensus 220 i~~ 222 (227)
|++
T Consensus 140 l~~ 142 (143)
T 4fo5_A 140 LKA 142 (143)
T ss_dssp HTC
T ss_pred HHh
Confidence 654
No 19
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.97 E-value=2.8e-30 Score=191.04 Aligned_cols=136 Identities=16% Similarity=0.203 Sum_probs=115.9
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHH---HHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ---LYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~---l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
++|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++|++++++|++|++|. +
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~-------~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE-------N 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS-------C
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC-------C
Confidence 67999999999999999999999999999999999999999999999998 9999998889999999985 7
Q ss_pred HHHHHHHHHhhCCCCccceeeeccCCCCc-hhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHH
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNA-APLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKD 219 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (227)
.+.+++|+ ++++++|+++ .|.++... ...| ++.++|++||||++|+|+++. .+.+++++.
T Consensus 75 ~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~ 135 (142)
T 3ewl_A 75 REEWATKA-VYMPQGWIVG--WNKAGDIRTRQLY-------------DIRATPTIYLLDGRKRVILKD---TSMEQLIDY 135 (142)
T ss_dssp HHHHHHHH-TTSCTTCEEE--ECTTCHHHHTTCS-------------CCCSSSEEEEECTTCBEEECS---CCHHHHHHH
T ss_pred HHHHHHHH-HHcCCCccee--eCCccchhhHHHc-------------CCCCCCeEEEECCCCCEEecC---CCHHHHHHH
Confidence 88999999 7889999988 45444311 1133 788999999999999999854 467788888
Q ss_pred HHHHhh
Q 027134 220 IKKLLE 225 (227)
Q Consensus 220 i~~lL~ 225 (227)
|+++.+
T Consensus 136 l~~~~~ 141 (142)
T 3ewl_A 136 LATQAG 141 (142)
T ss_dssp HHC---
T ss_pred HHHHcc
Confidence 877653
No 20
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.97 E-value=1.3e-29 Score=195.58 Aligned_cols=146 Identities=13% Similarity=0.198 Sum_probs=126.0
Q ss_pred cccCCCccCCeEEecC--CCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCc------EEEEEeCCCC
Q 027134 62 ASQSKTSVHDFSVKDA--KGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGL------EILAFPCNQF 133 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~--~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~------~vl~Vs~D~~ 133 (227)
....|.++|+|++++. +|+.+++++++||++||+||++||++|+.++|.|++++++|+++++ +|++|++|.
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~- 108 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD- 108 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC-
T ss_pred ccccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC-
Confidence 3478999999999999 9999999999999999999999999999999999999999999889 999999982
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCCh
Q 027134 134 GAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP 213 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~ 213 (227)
++.+.+++|+ ++++++|+++ .|..+. ....|+. .++.++|++||||++|+|++++.|..+.
T Consensus 109 -----~~~~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~ 169 (183)
T 3lwa_A 109 -----YSRDIAQDFV-TDNGLDYPSI--YDPPFM-TAASLGG----------VPASVIPTTIVLDKQHRPAAVFLREVTS 169 (183)
T ss_dssp -----CCHHHHHHHH-HHTTCCSCEE--ECTTCG-GGGGTTT----------CCTTCCSEEEEECTTSCEEEEECSCCCH
T ss_pred -----CCHHHHHHHH-HHcCCCccEE--ECCcch-HHHHhcc----------CCCCCCCeEEEECCCCcEEEEEcCCCCH
Confidence 2588999999 7889999998 555443 3333311 1578899999999999999999999899
Q ss_pred hhHHHHHHHHhhhC
Q 027134 214 LSIEKDIKKLLETA 227 (227)
Q Consensus 214 ~~l~~~i~~lL~~~ 227 (227)
+++.+.|+++|+++
T Consensus 170 ~~l~~~l~~ll~~a 183 (183)
T 3lwa_A 170 KDVLDVALPLVDEA 183 (183)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999764
No 21
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.97 E-value=8.2e-30 Score=188.80 Aligned_cols=132 Identities=15% Similarity=0.176 Sum_probs=112.4
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHH---HHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ---LYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~---l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
.+|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++ ++++|++++++|++|+.|. +
T Consensus 6 ~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~-------~ 78 (142)
T 3eur_A 6 RLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDE-------E 78 (142)
T ss_dssp CTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSS-------C
T ss_pred cCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCC-------C
Confidence 78999999999999999999999999999999999999999999999999 9999998899999999985 7
Q ss_pred HHHHHHHHHhhCCCCccceeeeccCCC-CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHH
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDVNGD-NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKD 219 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (227)
.+.+++++ ++++.+|+.. .|.++. .....| ++.++|++||||++|+|+++..+ .+++++.
T Consensus 79 ~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~ 139 (142)
T 3eur_A 79 LDEWKKHR-NDFAKEWTNG--YDKELVIKNKNLY-------------DLRAIPTLYLLDKNKTVLLKDAT---LQKVEQY 139 (142)
T ss_dssp HHHHHHHG-GGSCTTSEEE--ECTTCHHHHTTCS-------------CCTTCSEEEEECTTCBEEEEEEC---HHHHHHH
T ss_pred HHHHHHHH-Hhcccccccc--cCccchhhhhhhc-------------CCCcCCeEEEECCCCcEEecCCC---HHHHHHH
Confidence 78999998 7888888776 443331 012222 78889999999999999999874 4556555
Q ss_pred HH
Q 027134 220 IK 221 (227)
Q Consensus 220 i~ 221 (227)
|+
T Consensus 140 l~ 141 (142)
T 3eur_A 140 LA 141 (142)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 22
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.97 E-value=2.2e-29 Score=186.88 Aligned_cols=139 Identities=23% Similarity=0.339 Sum_probs=120.3
Q ss_pred ccCCCccCCeEEecCCCCeeecC--CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHH-hcCCcEEEEEeCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLS--IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKY-KNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~--~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~-~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
..+|+.+|+|++.+.+|+.++++ +++||++||+||++||++|+.++|.|.+++++| +++++.+++|++|.
T Consensus 5 ~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~------- 77 (148)
T 3fkf_A 5 VTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDI------- 77 (148)
T ss_dssp CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCS-------
T ss_pred ccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCC-------
Confidence 38899999999999999999999 999999999999999999999999999999999 88889999999985
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCC--CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHH
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNG--DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIE 217 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~ 217 (227)
+.+.+++++ ++++++|+++ .|..+ ......| ++.++|+++|+|++|+|++++. +.+.+.
T Consensus 78 ~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~---~~~~l~ 138 (148)
T 3fkf_A 78 DREAWETAI-KKDTLSWDQV--CDFTGLSSETAKQY-------------AILTLPTNILLSPTGKILARDI---QGEALT 138 (148)
T ss_dssp CHHHHHHHH-HHTTCCSEEE--CCSCGGGCHHHHHT-------------TCCSSSEEEEECTTSBEEEESC---CHHHHH
T ss_pred CHHHHHHHH-HHcCCCceEE--EccCCcchHHHHhc-------------CCCCcCEEEEECCCCeEEEecC---CHHHHH
Confidence 678999999 7889999988 34322 2233333 7889999999999999999987 688899
Q ss_pred HHHHHHhhhC
Q 027134 218 KDIKKLLETA 227 (227)
Q Consensus 218 ~~i~~lL~~~ 227 (227)
+.|+++|+++
T Consensus 139 ~~l~~ll~~e 148 (148)
T 3fkf_A 139 GKLKELLKTE 148 (148)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHHccC
Confidence 9999998753
No 23
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.96 E-value=1.2e-29 Score=190.06 Aligned_cols=140 Identities=19% Similarity=0.244 Sum_probs=119.2
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|+.+|+|++.|.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|. +.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~-------~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR-------REE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS-------CHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHH
Confidence 3789999999999999999999999999999999999999999999999999999998889999999985 788
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
.+++|+ ++++++|+++. |.... ...+.+.+ ++.++|++||||++|+|+.++. ..+++++.|++
T Consensus 76 ~~~~~~-~~~~~~~~~~~--d~~~~-~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 138 (152)
T 2lrn_A 76 DWKKAI-EEDKSYWNQVL--LQKDD-VKDVLESY----------CIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEK 138 (152)
T ss_dssp HHHHHH-HHHTCCSEEEE--ECHHH-HHHHHHHT----------TCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHH
T ss_pred HHHHHH-HHhCCCCeEEe--cccch-hHHHHHHh----------CCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHH
Confidence 999998 67799999883 32110 11222222 7888999999999999999975 46789999999
Q ss_pred Hhhh
Q 027134 223 LLET 226 (227)
Q Consensus 223 lL~~ 226 (227)
++++
T Consensus 139 l~~~ 142 (152)
T 2lrn_A 139 FVNG 142 (152)
T ss_dssp HHTS
T ss_pred HHhh
Confidence 8864
No 24
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.96 E-value=3.4e-29 Score=191.26 Aligned_cols=158 Identities=20% Similarity=0.314 Sum_probs=124.0
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCC-cchHhHHHHHHHHHHHhcCC--cEEEEEeCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCG-LTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPG 139 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~-~C~~~~~~l~~l~~~~~~~~--~~vl~Vs~D~~~~~~~~ 139 (227)
..+|..+|+|+++|.+|+.+++++++||++||+||++||+ +|+.+++.|.+++++|++++ ++|++|++| ++.+
T Consensus 7 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d----~~~d 82 (174)
T 1xzo_A 7 DPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD----PEND 82 (174)
T ss_dssp SCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTC
T ss_pred CccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC----CCCC
Confidence 3789999999999999999999999999999999999999 99999999999999999876 999999998 3445
Q ss_pred CHHHHHHHHHhhCCCCccceee-eccCCCCchhhHHH--hhhcCC-CCCCCccccceeEEEECCCCcEEEecCCCC--Ch
Q 027134 140 DNEQIQEFACTRFKAEFPIFDK-VDVNGDNAAPLYKH--LKSSKG-GLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SP 213 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~--~~~~~~-~~~~~~i~~~P~~~lid~~G~I~~~~~g~~--~~ 213 (227)
+.+.+++|+ ++++++|+.|.. .|.+.. ....|.. +....+ ...++++.++|++||||++|+|++++.|.. +.
T Consensus 83 ~~~~~~~~~-~~~~~~~~~~~~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~ 160 (174)
T 1xzo_A 83 KPKQLKKFA-ANYPLSFDNWDFLTGYSQS-EIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPY 160 (174)
T ss_dssp CHHHHHHHH-TTSCCCGGGEEEEBCSCHH-HHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCH
T ss_pred CHHHHHHHH-HHcCCCCcceEEEeCCCHH-HHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCH
Confidence 889999999 788999944321 232222 2222221 100000 111236788999999999999999998876 36
Q ss_pred hhHHHHHHHHhhh
Q 027134 214 LSIEKDIKKLLET 226 (227)
Q Consensus 214 ~~l~~~i~~lL~~ 226 (227)
+++.+.|+++|++
T Consensus 161 ~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 161 DDIISDVKSASTL 173 (174)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhc
Confidence 7899999999864
No 25
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.96 E-value=1.7e-29 Score=188.73 Aligned_cols=139 Identities=21% Similarity=0.408 Sum_probs=123.0
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
++|+.+|+|++.|.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.|++|++|. +.+.
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~-------~~~~ 73 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGE-------SKIA 73 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC-------CHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------CHHH
Confidence 368899999999999999999999999999999999999999999999999999998889999999985 6789
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
+++|+ ++++++|+++ .|.+.. ....| ++.++|++||+|++|+++.++.|..+.+.+.+.|+++
T Consensus 74 ~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 74 VHNFM-KSYGVNFPVV--LDTDRQ-VLDAY-------------DVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp HHHHH-HHHTCCSCEE--EETTSH-HHHHT-------------TCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCceEE--ECCchH-HHHhc-------------CCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 99998 6779999988 443332 33333 7888999999999999999999998899999999998
Q ss_pred hhh
Q 027134 224 LET 226 (227)
Q Consensus 224 L~~ 226 (227)
++.
T Consensus 137 l~~ 139 (151)
T 2f9s_A 137 KPG 139 (151)
T ss_dssp SCC
T ss_pred Hhh
Confidence 853
No 26
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.96 E-value=2e-29 Score=190.90 Aligned_cols=123 Identities=18% Similarity=0.292 Sum_probs=108.9
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCE-EEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKL-LLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~-vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
.+|+.+|+|++.|.+|+.+++++++||+ +||+|| ++||++|+.++|.|++++++|+++|++|++|+.| +.
T Consensus 3 ~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~~ 74 (161)
T 3drn_A 3 KVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------DI 74 (161)
T ss_dssp CTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------CH
T ss_pred CCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------CH
Confidence 6899999999999999999999999997 999999 9999999999999999999999989999999998 78
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCcccc----ceeEEEECCCCcEEEecCCCC
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKW----NFSKFLVDKEGNVVERYAPTT 211 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~----~P~~~lid~~G~I~~~~~g~~ 211 (227)
+.+++|+ ++++++|+++ .|.+. .....| ++.+ +|++||||++|+|++++.|..
T Consensus 75 ~~~~~~~-~~~~~~~~~~--~d~~~-~~~~~~-------------~v~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 75 NSHKRFK-EKYKLPFILV--SDPDK-KIRELY-------------GAKGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp HHHHHHH-HHTTCCSEEE--ECTTS-HHHHHT-------------TCCCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred HHHHHHH-HHhCCCceEE--ECCcH-HHHHHc-------------CCCCcCcccceEEEECCCCEEEEEEecCC
Confidence 9999999 7889999998 44332 234444 5555 899999999999999999843
No 27
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=1.8e-29 Score=200.50 Aligned_cols=148 Identities=21% Similarity=0.295 Sum_probs=125.8
Q ss_pred cccCCCccCCeEEecCCCCeeecCCCCCCE-EEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKL-LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~v~l~~~~gk~-vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
...+|+.+|+|+++|.+|+.+++++++||+ +||+||++|||+|+.++|.|++++++|++++++|++|++|.....+.++
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~ 110 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEET 110 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGS
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCC
Confidence 348999999999999999999999999995 9999999999999999999999999999989999999998644444479
Q ss_pred HHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecC---------CCC
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA---------PTT 211 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~---------g~~ 211 (227)
.+.+++|+ ++++++|+++ .|.++. ....| ++.++|++||||++|+|+++.. +..
T Consensus 111 ~~~~~~~~-~~~~~~~~~l--~D~~~~-~~~~~-------------~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~ 173 (218)
T 3u5r_E 111 LERVGAEV-KAYGYGFPYL--KDASQS-VAKAY-------------GAACTPDFFLYDRERRLVYHGQFDDARPGNGKDV 173 (218)
T ss_dssp HHHHHHHH-HHHTCCSCEE--ECTTCH-HHHHH-------------TCCEESEEEEECTTCBEEEEECSSSCCTTSCCCC
T ss_pred HHHHHHHH-HHhCCCccEE--ECCccH-HHHHc-------------CCCCCCeEEEECCCCcEEEecccccccccccccc
Confidence 99999999 6789999998 453332 44455 8888999999999999998743 233
Q ss_pred ChhhHHHHHHHHhhh
Q 027134 212 SPLSIEKDIKKLLET 226 (227)
Q Consensus 212 ~~~~l~~~i~~lL~~ 226 (227)
..+++++.|+++|+.
T Consensus 174 ~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 174 TGADLRAAVDAVLKG 188 (218)
T ss_dssp CCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHcC
Confidence 467899999998853
No 28
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=8.9e-31 Score=199.28 Aligned_cols=148 Identities=14% Similarity=0.250 Sum_probs=119.9
Q ss_pred cCCCccCCeEEecCCCCeeecCCC--CCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIY--KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~--~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
++|+++|+|+++|.+|+.++|+++ +||++||+|| ++|||+|+.+++.|++++++|+++|+++++||.| +
T Consensus 6 ~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d--------~ 77 (164)
T 4gqc_A 6 ELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD--------S 77 (164)
T ss_dssp CTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS--------C
T ss_pred cCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC--------C
Confidence 789999999999999999999998 8999999998 9999999999999999999999999999999988 7
Q ss_pred HHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC-----CChhh
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-----TSPLS 215 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~-----~~~~~ 215 (227)
.+.+++|. ++++++||++ .|.++. +.+.|+.+....+ +......|++||||++|+|++++.+. .+.++
T Consensus 78 ~~~~~~~~-~~~~~~fp~l--~D~~~~-v~~~ygv~~~~~~---~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~e 150 (164)
T 4gqc_A 78 PWCLKKFK-DENRLAFNLL--SDYNRE-VIKLYNVYHEDLK---GLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDE 150 (164)
T ss_dssp HHHHHHHH-HHTTCCSEEE--ECTTSH-HHHHTTCEEEEET---TEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHH
T ss_pred HHHHHHHH-HhcCccccee--ecCchH-HHHHcCCcccccc---cCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHH
Confidence 88999998 7889999998 555543 4555543321111 11223478999999999999986542 34567
Q ss_pred HHHHHHHHhhh
Q 027134 216 IEKDIKKLLET 226 (227)
Q Consensus 216 l~~~i~~lL~~ 226 (227)
+.+.+++|..+
T Consensus 151 il~~l~~l~~e 161 (164)
T 4gqc_A 151 VVREANKIAGE 161 (164)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 77778877654
No 29
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.96 E-value=3.9e-29 Score=189.08 Aligned_cols=154 Identities=16% Similarity=0.212 Sum_probs=117.9
Q ss_pred ccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCc-chHhHHHHHHHHHHHhc----CCcEEEEEeCCCCCCCCCCCHH
Q 027134 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 68 ~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~-C~~~~~~l~~l~~~~~~----~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
.+|+|++.|.+|+.+++++++||++||+||++||++ |+.++|.|++++++|++ .+++|++|++| ++.++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHH
Confidence 479999999999999999999999999999999998 99999999999999986 47999999998 4556789
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcC--CCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSK--GGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
.+++|+ ++++.+|+++.............|+...... ....++.+.|.|++||||++|+|++++.|..+++++.+.|
T Consensus 78 ~~~~~~-~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 156 (164)
T 2ggt_A 78 AIANYV-KEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 156 (164)
T ss_dssp HHHHHH-HTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHH
T ss_pred HHHHHH-HHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHH
Confidence 999999 6889999887311100011222221100000 0000012334449999999999999999988899999999
Q ss_pred HHHhhh
Q 027134 221 KKLLET 226 (227)
Q Consensus 221 ~~lL~~ 226 (227)
+++|++
T Consensus 157 ~~ll~~ 162 (164)
T 2ggt_A 157 ATHMRP 162 (164)
T ss_dssp HHHHGG
T ss_pred HHHHHh
Confidence 999875
No 30
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.96 E-value=8.3e-29 Score=187.30 Aligned_cols=145 Identities=16% Similarity=0.259 Sum_probs=124.8
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.+++|++|. +.+
T Consensus 8 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~-------~~~ 80 (165)
T 3or5_A 8 DARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE-------QLP 80 (165)
T ss_dssp CCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC-------CHH
T ss_pred hcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------CHH
Confidence 3889999999999999999999999999999999999999999999999999999999889999999985 788
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
.+++|+ ++++++|+++. +.. .....|..+. ..++.++|++||||++|+|+.++.|..+.+++.+.|++
T Consensus 81 ~~~~~~-~~~~~~~~~~~--~~~--~~~~~~~~~~-------~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 148 (165)
T 3or5_A 81 NVKNYM-KTQGIIYPVMM--ATP--ELIRAFNGYI-------DGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKM 148 (165)
T ss_dssp HHHHHH-HHHTCCSCEEE--CCH--HHHHHHHTTS-------TTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHH
T ss_pred HHHHHH-HHcCCCCceEe--cCH--HHHHHHhhhh-------ccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 999998 67799999883 321 2333332211 11577899999999999999999999999999999999
Q ss_pred Hhhh
Q 027134 223 LLET 226 (227)
Q Consensus 223 lL~~ 226 (227)
+|++
T Consensus 149 ~l~~ 152 (165)
T 3or5_A 149 ALGA 152 (165)
T ss_dssp HHC-
T ss_pred HHhh
Confidence 9864
No 31
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.96 E-value=6.2e-29 Score=184.46 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=120.0
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.|++|++|. +.+
T Consensus 5 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~ 77 (148)
T 3hcz_A 5 LLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER-------KDE 77 (148)
T ss_dssp CCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS-------SSH
T ss_pred cCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC-------CHH
Confidence 3789999999999999999999999999999999999999999999999999999999899999999985 677
Q ss_pred HHHHHHHhhCCCC-ccceeeeccCCC-CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 143 QIQEFACTRFKAE-FPIFDKVDVNGD-NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 143 ~~~~~~~~~~~~~-~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
.+++|+ ++++++ |+++ .|..+. .....| ++.++|+++|+|++|+|+.++.|..+.+.+.+.+
T Consensus 78 ~~~~~~-~~~~~~~~~~~--~d~~~~~~~~~~~-------------~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l 141 (148)
T 3hcz_A 78 EWLKFI-RSKKIGGWLNV--RDSKNHTDFKITY-------------DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQY 141 (148)
T ss_dssp HHHHHH-HHHTCTTSEEE--ECTTCCCCHHHHH-------------CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHH
T ss_pred HHHHHH-HHcCCCCceEE--eccccchhHHHhc-------------CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHH
Confidence 999999 677888 8887 444432 134444 8888999999999999999999876555666666
Q ss_pred HHHhh
Q 027134 221 KKLLE 225 (227)
Q Consensus 221 ~~lL~ 225 (227)
.++++
T Consensus 142 ~~~l~ 146 (148)
T 3hcz_A 142 EKSLK 146 (148)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66654
No 32
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.96 E-value=5.6e-29 Score=188.46 Aligned_cols=149 Identities=16% Similarity=0.282 Sum_probs=116.3
Q ss_pred ccCCCccCCeE--EecCCCCeeecCCCCCCEEEEEEec-CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 63 SQSKTSVHDFS--VKDAKGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 63 ~~~g~~~p~f~--l~~~~G~~v~l~~~~gk~vlv~F~a-swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
..+|+++|+|+ +.|.+|+.+++++++||++||+||+ +|||+|+.+++.|++++++|+++|++|++|+.|
T Consensus 7 l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-------- 78 (163)
T 3gkn_A 7 AVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD-------- 78 (163)
T ss_dssp CCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS--------
T ss_pred cccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC--------
Confidence 47899999999 9999999999999999999999997 999999999999999999999999999999998
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCC-CccccceeEEEECCCCcEEEecCCCCCh---hh
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFG-DSIKWNFSKFLVDKEGNVVERYAPTTSP---LS 215 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~i~~~P~~~lid~~G~I~~~~~g~~~~---~~ 215 (227)
+.+.+++|+ ++++++|+++ .|.++. ....|+...... ..| ....++|++||||++|+|++++.+.... ++
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~~v~~~~~--~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~ 152 (163)
T 3gkn_A 79 SVKSHDNFC-AKQGFAFPLV--SDGDEA-LCRAFDVIKEKN--MYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADA 152 (163)
T ss_dssp CHHHHHHHH-HHHCCSSCEE--ECTTCH-HHHHTTCEEEEE--ETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHH
T ss_pred CHHHHHHHH-HHhCCCceEE--ECCcHH-HHHHhCCccccc--cccccccCcceEEEEECCCCeEEEEEcCCCcccCHHH
Confidence 889999999 6789999998 454432 444442221100 000 0111289999999999999998654433 34
Q ss_pred HHHHHHHHhh
Q 027134 216 IEKDIKKLLE 225 (227)
Q Consensus 216 l~~~i~~lL~ 225 (227)
+.+.|+++.+
T Consensus 153 il~~l~~l~~ 162 (163)
T 3gkn_A 153 VLAALKAHAK 162 (163)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHhc
Confidence 5555555543
No 33
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=3.7e-29 Score=187.14 Aligned_cols=136 Identities=11% Similarity=0.181 Sum_probs=113.8
Q ss_pred cCCeEEec-CCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHH
Q 027134 69 VHDFSVKD-AKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEF 147 (227)
Q Consensus 69 ~p~f~l~~-~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~ 147 (227)
+|.+.+.. .+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++| +.+.+++|
T Consensus 3 ~pa~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ----CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred CCcchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 34444444 7999999999999999999999999999999999999999998888999999998 78899999
Q ss_pred HHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCc--cccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS--IKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
+ ++++++||++. +.... ...+++.+ + +.++|++||||++|+|++++.|..+.+++++.|+++++
T Consensus 75 ~-~~~~~~~~~~~--~~~~~-~~~~~~~~----------~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 75 L-KQTPVSYPIWR--YTGAN-SRNFMKTY----------GNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp H-HHSCCSSCEEE--ECCSC-HHHHHHTT----------TCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred H-HHcCCCCceEe--cCccc-hHHHHHHh----------CCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 9 78899999984 32222 33343333 4 77899999999999999999999999999999999875
Q ss_pred h
Q 027134 226 T 226 (227)
Q Consensus 226 ~ 226 (227)
.
T Consensus 141 ~ 141 (151)
T 3raz_A 141 K 141 (151)
T ss_dssp C
T ss_pred H
Confidence 4
No 34
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=187.36 Aligned_cols=152 Identities=13% Similarity=0.232 Sum_probs=118.4
Q ss_pred CCeEEecCCCCeeecCCCCCCEEEEEEecCCCCc-chHhHHHHHHHHHHHhc----CCcEEEEEeCCCCCCCCCCCHHHH
Q 027134 70 HDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNEQI 144 (227)
Q Consensus 70 p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~-C~~~~~~l~~l~~~~~~----~~~~vl~Vs~D~~~~~~~~~~~~~ 144 (227)
|+|++.|.+|+.+++++++||++||+||++||++ |+.++|.|++++++|++ .+++|++|++| ++.++.+.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHH
Confidence 9999999999999999999999999999999998 99999999999999975 47999999998 345689999
Q ss_pred HHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCC--CCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 145 QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG--GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
++|+ ++++.+|+.+.+...........|+....... ...++.+.|+|++||||++|+|++++.|..+++++.+.|++
T Consensus 83 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 83 ARYV-QDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHH-HTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHH-HHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9999 78899998873211111112222211111000 01112356777999999999999999998889999999999
Q ss_pred Hhhh
Q 027134 223 LLET 226 (227)
Q Consensus 223 lL~~ 226 (227)
+|++
T Consensus 162 ll~~ 165 (171)
T 2rli_A 162 HMAA 165 (171)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 35
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=2.7e-28 Score=182.21 Aligned_cols=138 Identities=25% Similarity=0.386 Sum_probs=121.2
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|+.+|+|++.+ +|+.+++++++||++||+||++||++|+.+++.|.+++++|+++++.+++|++|. ..+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDA-------KTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCS-------SHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCC-------CHH
Confidence 47899999999999 9999999999999999999999999999999999999999999899999999985 688
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCCh--hhHHHHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP--LSIEKDI 220 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~--~~l~~~i 220 (227)
.+++|+ ++++++|+++ .|.++. ....| ++.++|++||||++|+|++++.|..+. +++++.|
T Consensus 75 ~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 75 DAMKFL-AQVPAEFTVA--FDPKGQ-TPRLY-------------GVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHHH-HHSCCCSEEE--ECTTCH-HHHHT-------------TCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHHH-HHcCCCCcee--ECCcch-hHHHc-------------CCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 899998 7889999988 454432 33344 788899999999999999999986554 6788888
Q ss_pred HHHhh
Q 027134 221 KKLLE 225 (227)
Q Consensus 221 ~~lL~ 225 (227)
++++.
T Consensus 138 ~~~~~ 142 (152)
T 3gl3_A 138 LAALG 142 (152)
T ss_dssp HHHTC
T ss_pred HHHHc
Confidence 88774
No 36
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=1.5e-28 Score=183.70 Aligned_cols=140 Identities=17% Similarity=0.299 Sum_probs=123.6
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
.+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.|++|+.| .++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~------~~~~~~ 76 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP------IDPIES 76 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT------TSCHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC------CCCHHH
Confidence 57999999999999999999999999999999999999999999999999999999988999999976 347899
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
+++|+ ++++++|+++ .|... .....| ++.++|++||+|++|+|+.++.|..+.+.+.+.|+++
T Consensus 77 ~~~~~-~~~~~~~~~~--~d~~~-~~~~~~-------------~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 77 VRQYV-KDYGLPFTVM--YDADK-AVGQAF-------------GTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHH-HHTTCCSEEE--ECSSC-HHHHHH-------------TCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCceEE--cCchH-HHHHHc-------------CCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99998 7889999887 34332 233444 7888999999999999999999998899999999999
Q ss_pred hhh
Q 027134 224 LET 226 (227)
Q Consensus 224 L~~ 226 (227)
|+.
T Consensus 140 l~~ 142 (153)
T 2l5o_A 140 WRN 142 (153)
T ss_dssp HHC
T ss_pred HHh
Confidence 864
No 37
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.96 E-value=1.8e-28 Score=188.43 Aligned_cols=139 Identities=14% Similarity=0.217 Sum_probs=119.6
Q ss_pred ccccCCCccCCeEEecCCC--CeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 61 MASQSKTSVHDFSVKDAKG--QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G--~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
....+|+.+|+|++.+.+| +.+++++++||++||+||++||++|+.++|.|++++++ ++.|++|++|+
T Consensus 28 ~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d------ 97 (176)
T 3kh7_A 28 PSALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKD------ 97 (176)
T ss_dssp TTTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESC------
T ss_pred cccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCC------
Confidence 3458999999999999999 89999999999999999999999999999999999876 59999999875
Q ss_pred CCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHH
Q 027134 139 GDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEK 218 (227)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (227)
+.+.+++|+ ++++++|+.+. .|.++ .....| ++.++|++||||++|+|++++.|..+.+.+.+
T Consensus 98 -~~~~~~~~~-~~~~~~~~~~~-~d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 160 (176)
T 3kh7_A 98 -DNAAAIKWL-NELHNPYLLSI-SDADG-TLGLDL-------------GVYGAPETYLIDKQGIIRHKIVGVVDQKVWRE 160 (176)
T ss_dssp -CHHHHHHHH-HHTTCCCSEEE-EETTC-HHHHHH-------------TCCSSCEEEEECTTCBEEEEEESCCCHHHHHH
T ss_pred -CHHHHHHHH-HHcCCCCceEE-ECCcc-hHHHHc-------------CCCCCCeEEEECCCCeEEEEEcCCCCHHHHHH
Confidence 899999999 78899998531 34333 244444 78889999999999999999999988888888
Q ss_pred HHHHHhhh
Q 027134 219 DIKKLLET 226 (227)
Q Consensus 219 ~i~~lL~~ 226 (227)
.|+++|++
T Consensus 161 ~l~~~l~~ 168 (176)
T 3kh7_A 161 QLAPLYQQ 168 (176)
T ss_dssp HTHHHHHH
T ss_pred HHHHHHHH
Confidence 88888753
No 38
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.96 E-value=1.3e-28 Score=191.73 Aligned_cols=147 Identities=20% Similarity=0.278 Sum_probs=125.6
Q ss_pred ccCCCccCCeEEe-cCCCCeeecCCCCCC-EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVK-DAKGQDVDLSIYKGK-LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 63 ~~~g~~~p~f~l~-~~~G~~v~l~~~~gk-~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
..+|+.+|+|++. +.+|+.+++++++|| ++||+||++||++|+.++|.|++++++|++++++|++|++|.......++
T Consensus 18 ~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~ 97 (196)
T 2ywi_A 18 FPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDS 97 (196)
T ss_dssp CCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGS
T ss_pred CCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccC
Confidence 4789999999999 999999999999999 49999999999999999999999999999888999999998432222368
Q ss_pred HHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEe---------cCCCC
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER---------YAPTT 211 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~---------~~g~~ 211 (227)
.+.+++|+ ++++++|+++ .|.+.. ....| ++.++|++||||++|+|+++ +.|..
T Consensus 98 ~~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~ 160 (196)
T 2ywi_A 98 PENMKKVA-EELGYPFPYL--YDETQE-VAKAY-------------DAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPV 160 (196)
T ss_dssp HHHHHHHH-HHHTCCSCEE--ECSSCH-HHHHH-------------TCCEESEEEEEETTCBEEEEECSSSCCTTTCCCC
T ss_pred HHHHHHHH-HHcCCCceEE--ECCchH-HHHHh-------------CCCCCCeEEEEcCCCeEEEccccCcccccccCcc
Confidence 99999999 6779999988 443332 34444 78889999999999999998 45766
Q ss_pred ChhhHHHHHHHHhhh
Q 027134 212 SPLSIEKDIKKLLET 226 (227)
Q Consensus 212 ~~~~l~~~i~~lL~~ 226 (227)
+.+++++.|+++++.
T Consensus 161 ~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 161 TGESIRAALDALLEG 175 (196)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcC
Confidence 788999999999864
No 39
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=2.1e-28 Score=183.63 Aligned_cols=133 Identities=29% Similarity=0.403 Sum_probs=111.3
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
..|+.+|+|++.|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++|++|++|++|. ..+.
T Consensus 10 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~~~~ 82 (152)
T 2lrt_A 10 IKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG-------DEHF 82 (152)
T ss_dssp SCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC-------CHHH
T ss_pred ccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHHH
Confidence 678999999999999999999999999999999999999999999999999999999899999999985 5677
Q ss_pred HHHHHHhhCCCCccceeeeccCCC--CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGD--NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIK 221 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~ 221 (227)
++++. . +++|+++ .|.++. .....| ++..+|++||||++|+|++++.|..+. ++.+.
T Consensus 83 ~~~~~-~--~~~~~~~--~d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~---e~~~~ 141 (152)
T 2lrt_A 83 WKTSA-D--NLPWVCV--RDANGAYSSYISLY-------------NVTNLPSVFLVNRNNELSARGENIKDL---DEAIK 141 (152)
T ss_dssp HHHHH-T--TCSSEEE--ECSSGGGCHHHHHH-------------TCCSCSEEEEEETTTEEEEETTTCSCH---HHHHH
T ss_pred HHHHH-h--CCCceEE--ECCCCcchHHHHHc-------------CcccCceEEEECCCCeEEEecCCHHHH---HHHHH
Confidence 77776 3 3678877 454443 133334 778899999999999999999986554 44454
Q ss_pred HHh
Q 027134 222 KLL 224 (227)
Q Consensus 222 ~lL 224 (227)
+++
T Consensus 142 ~~~ 144 (152)
T 2lrt_A 142 KLL 144 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 40
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.96 E-value=1.8e-28 Score=189.95 Aligned_cols=146 Identities=20% Similarity=0.324 Sum_probs=122.7
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++ ++|++|++|.....+.++.+
T Consensus 7 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~ 85 (188)
T 2cvb_A 7 LPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPE 85 (188)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHH
T ss_pred CCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHH
Confidence 47899999999999999999999999999999999999999999999999999999988 99999999743323335889
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEec--------CCCCChh
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY--------APTTSPL 214 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~--------~g~~~~~ 214 (227)
.+++|+ ++++++|+++ .|.++. ....| ++.++|++||||++|+|+++. .|..+.+
T Consensus 86 ~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~ 148 (188)
T 2cvb_A 86 KMAAFA-EEHGIFFPYL--LDETQE-VAKAY-------------RALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSH 148 (188)
T ss_dssp HHHHHH-HHHTCCSCEE--ECSSSH-HHHHT-------------TCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCC
T ss_pred HHHHHH-HHhCCCceEE--ECCcch-HHHHc-------------CCCCCCeEEEECCCCcEEEEEecCCccccccccCHH
Confidence 999999 6779999988 443332 34444 788899999999999999982 1223567
Q ss_pred hHHHHHHHHhhh
Q 027134 215 SIEKDIKKLLET 226 (227)
Q Consensus 215 ~l~~~i~~lL~~ 226 (227)
++++.|+++++.
T Consensus 149 ~l~~~i~~ll~~ 160 (188)
T 2cvb_A 149 DLEAAIEALLRG 160 (188)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 899999999864
No 41
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.96 E-value=1.9e-28 Score=187.41 Aligned_cols=156 Identities=13% Similarity=0.164 Sum_probs=121.5
Q ss_pred cCCCccC-CeEEecCCCCeeecCCCCCCEEEEEEecCCCC-cchHhHHHHHHHHHHHhc--CCcEEEEEeCCCCCCCCCC
Q 027134 64 QSKTSVH-DFSVKDAKGQDVDLSIYKGKLLLIVNVASQCG-LTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p-~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~-~C~~~~~~l~~l~~~~~~--~~~~vl~Vs~D~~~~~~~~ 139 (227)
++|+++| +|+++|.+|+.+++++++||++||+||++||+ +|+.+++.|+++++++++ +++++++||+| + .+
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d----~-~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD----P-KD 76 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC----T-TC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC----C-CC
Confidence 5799999 99999999999999999999999999999998 699999999999999975 45999999998 3 46
Q ss_pred CHHHHHHHHHhhCCCCccceeee-ccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC-CChhhHH
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKV-DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-TSPLSIE 217 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~-~~~~~l~ 217 (227)
+.+.+++|+ ++++.+++.|... ..+.+....+.+.+.-.... .++++.+.|++||||++|+|+.++.|. .+++++.
T Consensus 77 ~~~~~~~~~-~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~ 154 (170)
T 3me7_A 77 TLEDIKRFQ-KEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT-AGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFV 154 (170)
T ss_dssp CHHHHHHHH-HHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE-ETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHH
T ss_pred CHHHHHHHH-HHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec-CCCccccCceEEEECCCCeEEEEEeCCCCCHHHHH
Confidence 899999999 7889888754221 11111122332221100000 123678899999999999999988875 5678899
Q ss_pred HHHHHHhhh
Q 027134 218 KDIKKLLET 226 (227)
Q Consensus 218 ~~i~~lL~~ 226 (227)
+.|++++.+
T Consensus 155 ~~l~~~~~~ 163 (170)
T 3me7_A 155 NALRLARGE 163 (170)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhhcc
Confidence 999988764
No 42
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.96 E-value=1.1e-28 Score=190.17 Aligned_cols=150 Identities=14% Similarity=0.182 Sum_probs=115.5
Q ss_pred ccCCCc----cCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCC
Q 027134 63 SQSKTS----VHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (227)
Q Consensus 63 ~~~g~~----~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~ 137 (227)
.++|+. +|+|+++|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++|++|++|+.|
T Consensus 21 l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D------ 94 (179)
T 3ixr_A 21 MNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD------ 94 (179)
T ss_dssp SCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC------
T ss_pred cCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC------
Confidence 366666 99999999999999999999999999999 9999999999999999999999999999999998
Q ss_pred CCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCCh---h
Q 027134 138 PGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP---L 214 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~---~ 214 (227)
+.+.+++|+ ++++++||++ .|.++. ....|+....... ...+...++|++||||++|+|++++.+.... +
T Consensus 95 --~~~~~~~~~-~~~~~~f~~l--~D~~~~-~~~~~gv~~~~~~-~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~ 167 (179)
T 3ixr_A 95 --SVKSHDSFC-AKQGFTFPLV--SDSDAI-LCKAFDVIKEKTM-YGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAE 167 (179)
T ss_dssp --CHHHHHHHH-HHHTCCSCEE--ECTTCH-HHHHTTCEEEECC-C--CEEEECCEEEEECTTSBEEEEECSCCSTTHHH
T ss_pred --CHHHHHHHH-HHcCCceEEE--ECCchH-HHHHcCCcccccc-cCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHH
Confidence 788999999 6789999998 454432 4445533221110 0001123479999999999999998654332 3
Q ss_pred hHHHHHHHHhh
Q 027134 215 SIEKDIKKLLE 225 (227)
Q Consensus 215 ~l~~~i~~lL~ 225 (227)
++.+.|+++.+
T Consensus 168 ~il~~l~~l~~ 178 (179)
T 3ixr_A 168 EVLNKLKAHAE 178 (179)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 45555655543
No 43
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=7.6e-28 Score=179.73 Aligned_cols=141 Identities=20% Similarity=0.321 Sum_probs=121.0
Q ss_pred ccCCCccC-CeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVH-DFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p-~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+| +|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. ..
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~ 75 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK-------NK 75 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCS-------CH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccC-------cH
Confidence 37899999 99999999999999999999999999999999999999999999999998889999999985 66
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIK 221 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~ 221 (227)
+.+++|+ ++++++++.+. .|. .......| ++.++|+++|+|++|+|++++.|..+.+++++.|+
T Consensus 76 ~~~~~~~-~~~~~~~~~~~-~d~-~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 139 (152)
T 2lja_A 76 KAWENMV-TKDQLKGIQLH-MGT-DRTFMDAY-------------LINGIPRFILLDRDGKIISANMTRPSDPKTAEKFN 139 (152)
T ss_dssp HHHHHHH-HHHTCCSEEEE-CSS-CTHHHHHT-------------TCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHH
T ss_pred HHHHHHH-HhcCCCCceee-cCc-chhHHHHc-------------CcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHH
Confidence 8899998 56688765441 222 22233333 78889999999999999999999888889999999
Q ss_pred HHhhh
Q 027134 222 KLLET 226 (227)
Q Consensus 222 ~lL~~ 226 (227)
+++..
T Consensus 140 ~~~~~ 144 (152)
T 2lja_A 140 ELLGL 144 (152)
T ss_dssp HHHTC
T ss_pred HHhcc
Confidence 98753
No 44
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.96 E-value=5.3e-28 Score=186.91 Aligned_cols=145 Identities=21% Similarity=0.230 Sum_probs=119.6
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|..+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|++++++|++|++|. ++.+
T Consensus 34 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~~~ 107 (186)
T 1jfu_A 34 ASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT------RDPE 107 (186)
T ss_dssp CCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC------SCTT
T ss_pred ccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC------CCHH
Confidence 4789999999999999999999999999999999999999999999999999999998789999999983 2456
Q ss_pred HHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCC--hhhHHHH
Q 027134 143 QIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS--PLSIEKD 219 (227)
Q Consensus 143 ~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~--~~~l~~~ 219 (227)
.+++|+ +++++ .|+++ .|.++. ....|+. .. +..++|++||||++|+|++++.|..+ .+++.+.
T Consensus 108 ~~~~~~-~~~~~~~~~~~--~d~~~~-~~~~~~~---~~------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~ 174 (186)
T 1jfu_A 108 KPKTFL-KEANLTRLGYF--NDQKAK-VFQDLKA---IG------RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKL 174 (186)
T ss_dssp HHHHHH-HHTTCCTTCCE--ECTTCH-HHHHHHT---TT------CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHH
T ss_pred HHHHHH-HHcCCCCCceE--ECCcch-HHHHhcc---cc------ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHH
Confidence 788888 67888 58887 444332 3333311 10 22468999999999999999988765 5779999
Q ss_pred HHHHhhh
Q 027134 220 IKKLLET 226 (227)
Q Consensus 220 i~~lL~~ 226 (227)
|+++|++
T Consensus 175 l~~ll~~ 181 (186)
T 1jfu_A 175 IRAATGK 181 (186)
T ss_dssp HHHHHC-
T ss_pred HHHHhcc
Confidence 9999864
No 45
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.95 E-value=8.6e-28 Score=186.18 Aligned_cols=137 Identities=14% Similarity=0.200 Sum_probs=118.0
Q ss_pred cCCCccCCeEEecCCCC----eeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQ----DVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~----~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
.+|+.+|+|++.+.+|+ .+++++++||++||+|| ++||++|+.+++.|++++++|++++++|++|++|
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------- 74 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------- 74 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC-------
Confidence 67999999999999999 99999999999999999 9999999999999999999999888999999998
Q ss_pred CCHHHHHHHHHhhC----CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc------cceeEEEECCCCcEEEecC
Q 027134 139 GDNEQIQEFACTRF----KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVVERYA 208 (227)
Q Consensus 139 ~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~I~~~~~ 208 (227)
+.+.+++|+ +++ +++|+++ .|.+. .....| ++. ++|++||||++|+|++++.
T Consensus 75 -~~~~~~~~~-~~~~~~~~~~~~~~--~d~~~-~~~~~~-------------~v~~~~~g~~~P~~~lid~~G~i~~~~~ 136 (187)
T 1we0_A 75 -THFVHKAWH-ENSPAVGSIEYIMI--GDPSQ-TISRQF-------------DVLNEETGLADRGTFIIDPDGVIQAIEI 136 (187)
T ss_dssp -CHHHHHHHH-HSCHHHHTCCSEEE--ECTTC-HHHHHT-------------TCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred -CHHHHHHHH-HHhccccCCCceEE--ECCch-HHHHHh-------------CCCcCCCCceeeEEEEECCCCeEEEEEe
Confidence 678888998 676 7899988 44332 234444 444 7999999999999999988
Q ss_pred CCC----ChhhHHHHHHHHhh
Q 027134 209 PTT----SPLSIEKDIKKLLE 225 (227)
Q Consensus 209 g~~----~~~~l~~~i~~lL~ 225 (227)
|.. +.+++.+.|++++.
T Consensus 137 g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 137 NADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp ECTTSCCCTTHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHhh
Confidence 764 56778888888764
No 46
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=6.6e-28 Score=180.45 Aligned_cols=139 Identities=17% Similarity=0.324 Sum_probs=119.6
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
.+|.++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. ++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~~ 76 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE------GGKVA 76 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT------THHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC------cchHH
Confidence 679999999999999999999999999999999999999999999999999999998889999999984 23888
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC--ChhhHHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLSIEKDIK 221 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~--~~~~l~~~i~ 221 (227)
+++|+ ++++++|+++ .|.+.. ....| ++.++|++||||++|+|++++.|.. +.+++.+.|+
T Consensus 77 ~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 139 (154)
T 3kcm_A 77 VEEFF-RKTGFTLPVL--LDADKR-VGKLY-------------GTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLN 139 (154)
T ss_dssp HHHHH-HHHCCCCCEE--ECTTCH-HHHHH-------------TCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHH-HHcCCCeeEE--ecCchH-HHHHh-------------CCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHH
Confidence 99998 6779999988 444332 34444 7888999999999999999998876 4557888888
Q ss_pred HHhh
Q 027134 222 KLLE 225 (227)
Q Consensus 222 ~lL~ 225 (227)
++.+
T Consensus 140 ~l~~ 143 (154)
T 3kcm_A 140 NELS 143 (154)
T ss_dssp TC--
T ss_pred HHHH
Confidence 8764
No 47
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.95 E-value=5.2e-28 Score=192.44 Aligned_cols=142 Identities=17% Similarity=0.242 Sum_probs=115.9
Q ss_pred ccCCCccCCeEEecC--CC--CeeecCCC-CCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA--KG--QDVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G--~~v~l~~~-~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
..+|+.+|+|++++. +| +.++++++ +||++||+|| ++|||+|+.++|.|++++++|++++++|++||+|
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D----- 99 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD----- 99 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 378999999999998 99 99999999 9999999999 9999999999999999999999889999999998
Q ss_pred CCCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC
Q 027134 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g 209 (227)
+.+.+++|+ +++ +++||++ .|.++ .+.+.|+.. ... + ..+|++||||++|+|++++.|
T Consensus 100 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l--~D~~~-~~~~~ygv~-~~~------g-~~~P~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 100 ---SVYSHLAWK-NMPIEKGGIGNVEFTLV--SDINK-DISKNYNVL-YDN------S-FALRGLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp ---CHHHHHHHH-HSCGGGTCCCSCSSEEE--ECTTS-HHHHHTTCE-ETT------T-EECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHH-HHhhhhcCccCCceEEE--ECCch-HHHHHcCCc-ccC------C-CccceEEEECCCCeEEEEEec
Confidence 778889998 566 6789988 45333 244445221 000 0 358999999999999999876
Q ss_pred CC----ChhhHHHHHHHHh
Q 027134 210 TT----SPLSIEKDIKKLL 224 (227)
Q Consensus 210 ~~----~~~~l~~~i~~lL 224 (227)
.. +.+++.+.|+++.
T Consensus 165 ~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 165 DLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp CTTCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHh
Confidence 32 3567888888775
No 48
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.95 E-value=3.2e-28 Score=188.76 Aligned_cols=142 Identities=12% Similarity=0.215 Sum_probs=115.4
Q ss_pred cCCCccCCeEEecC-CC--CeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDA-KG--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p~f~l~~~-~G--~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
.+|+.+|+|++.+. +| +.+++++++||++||+|| ++|||+|+.++|.|++++++|++++++|++||.|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 57999999999999 59 899999999999999999 5999999999999999999999989999999998
Q ss_pred CHHHHHHHHHhhC----CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC----
Q 027134 140 DNEQIQEFACTRF----KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT---- 211 (227)
Q Consensus 140 ~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~---- 211 (227)
+.+.+++|+ +++ +++||++ .|.++. +...|+..... . + .++|++||||++|+|++++.|..
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~fp~l--~D~~~~-~~~~ygv~~~~----~--g-~~~p~~~lID~~G~i~~~~~~~~~~~~ 142 (186)
T 1n8j_A 74 THFTHKAWH-SSSETIAKIKYAMI--GDPTGA-LTRNFDNMRED----E--G-LADRATFVVDPQGIIQAIEVTAEGIGR 142 (186)
T ss_dssp CHHHHHHHH-HHCTTGGGCCSEEE--ECTTSH-HHHHTTCEETT----T--T-EECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred CHHHHHHHH-HHcCcccCCceeEE--ECCchH-HHHHhCCccCC----C--C-ceeeEEEEECCCCeEEEEEecCCCCCC
Confidence 678889998 677 7899988 454332 44444221100 0 1 14799999999999999987754
Q ss_pred ChhhHHHHHHHHh
Q 027134 212 SPLSIEKDIKKLL 224 (227)
Q Consensus 212 ~~~~l~~~i~~lL 224 (227)
+.+++.+.|+++.
T Consensus 143 ~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 143 DASDLLRKIKAAQ 155 (186)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 3567888888775
No 49
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.95 E-value=1e-27 Score=183.18 Aligned_cols=143 Identities=15% Similarity=0.170 Sum_probs=114.2
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|++.|.+|+.+++++++||++||+|| ++|||+|+.+++.|++++++| ++++|++||.| +.
T Consensus 21 l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d--------~~ 90 (171)
T 2yzh_A 21 LKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD--------LP 90 (171)
T ss_dssp CCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------CH
T ss_pred CCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------CH
Confidence 37899999999999999999999999999999999 899999999999999999999 57999999998 68
Q ss_pred HHHHHHHHhhCCC-Cccceeeec-cCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC-----CCChh
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVD-VNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP-----TTSPL 214 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g-----~~~~~ 214 (227)
+.+++|+ +++++ +|+++ .| .++. . +.|+...... ... + .++|++||||++|+|++++.| ..+.+
T Consensus 91 ~~~~~~~-~~~~~~~~~~l--~D~~~~~-~-~~~gv~~~~~-~~~--g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~ 161 (171)
T 2yzh_A 91 FAQKRFC-ESFNIQNVTVA--SDFRYRD-M-EKYGVLIGEG-ALK--G-ILARAVFIIDKEGKVAYVQLVPEITEEPNYD 161 (171)
T ss_dssp HHHHHHH-HHTTCCSSEEE--ECTTTCG-G-GGGTCBBCSS-TTT--T-SBCCEEEEECTTSBEEEEEECSBTTSCCCCH
T ss_pred HHHHHHH-HHcCCCCeEEe--ecCccCc-H-HHhCCEeccc-ccC--C-ceeeEEEEEcCCCeEEEEEeCCCcCCCCCHH
Confidence 8899998 68899 89988 45 3332 4 5553321110 000 1 147999999999999999864 33456
Q ss_pred hHHHHHHHHh
Q 027134 215 SIEKDIKKLL 224 (227)
Q Consensus 215 ~l~~~i~~lL 224 (227)
++.+.|+++|
T Consensus 162 ~ll~~l~~ll 171 (171)
T 2yzh_A 162 EVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhC
Confidence 7888887765
No 50
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.95 E-value=7.5e-28 Score=177.82 Aligned_cols=137 Identities=16% Similarity=0.303 Sum_probs=116.5
Q ss_pred cccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
...+|..+|+|++.+.+|+.+++++ +||++||+||++||++|+.+++.|++++++++++++.+++|++|. ..++.
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~~ 82 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN----SEQNQ 82 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG----GSSCH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC----CcCCH
Confidence 3488999999999999999999999 999999999999999999999999999999997779999999973 34588
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
+.+++|+ ++++++|+++ .|.+.. ....| ++.++|+++|+|++|+|+.++.|..+.+.+.+.|
T Consensus 83 ~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 83 QVVEDFI-KANKLTFPIV--LDSKGE-LMKEY-------------HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHH-HHTTCCSCEE--ECSSSH-HHHHT-------------TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHH-HHcCCceeEE--EcCchh-HHHhc-------------CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 9999998 7889999988 443332 33333 7888999999999999999999998888777665
No 51
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=1.8e-27 Score=185.73 Aligned_cols=137 Identities=11% Similarity=0.152 Sum_probs=117.7
Q ss_pred ccCCCccCCeEEecCC-------------C--CeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEE
Q 027134 63 SQSKTSVHDFSVKDAK-------------G--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEIL 126 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~-------------G--~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl 126 (227)
..+|+.+|+|++.+.+ | +.+++++++||++||+|| ++||++|+.+++.|++++++|++++++|+
T Consensus 4 l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 83 (195)
T 2bmx_A 4 LTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQIL 83 (195)
T ss_dssp CCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEE
T ss_pred CCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 3789999999999988 7 899999999999999999 99999999999999999999998889999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHhhC----CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc-----cceeEEEE
Q 027134 127 AFPCNQFGAQEPGDNEQIQEFACTRF----KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLV 197 (227)
Q Consensus 127 ~Vs~D~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~li 197 (227)
+|++| +.+.+++|+ +++ +++|+++ .|.+. .....| ++. ++|++|||
T Consensus 84 ~Vs~d--------~~~~~~~~~-~~~~~~~~~~~~~~--~d~~~-~~~~~~-------------~v~~~~g~~~P~~~li 138 (195)
T 2bmx_A 84 GVSID--------SEFAHFQWR-AQHNDLKTLPFPML--SDIKR-ELSQAA-------------GVLNADGVADRVTFIV 138 (195)
T ss_dssp EEESS--------CHHHHHHHH-HHCTTGGGCCSCEE--ECTTS-HHHHHH-------------TCBCTTSSBCEEEEEE
T ss_pred EEECC--------CHHHHHHHH-HHhccccCCceeEE--eCCch-HHHHHh-------------CCcccCCCccceEEEE
Confidence 99998 678889998 676 7889988 44332 244444 555 79999999
Q ss_pred CCCCcEEEecCCCC----ChhhHHHHHHHHh
Q 027134 198 DKEGNVVERYAPTT----SPLSIEKDIKKLL 224 (227)
Q Consensus 198 d~~G~I~~~~~g~~----~~~~l~~~i~~lL 224 (227)
|++|+|++++.|.. +.+++.+.|++++
T Consensus 139 d~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 139 DPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp CTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99999999988764 4677888888776
No 52
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.95 E-value=7.4e-28 Score=181.62 Aligned_cols=127 Identities=20% Similarity=0.283 Sum_probs=109.2
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCC-EEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGK-LLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk-~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
..+|+.+|+|++.|.+|+.+++++++|| ++||+|| ++||++|+.+++.|++++++|++++++|++|++| +
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d--------~ 80 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG--------P 80 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------C
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------C
Confidence 3789999999999999999999999998 9999998 9999999999999999999999888999999998 7
Q ss_pred HHHHHHHHHhhCCCCccceeeecc-CCCCchhhHHHhhhcCCCCCCCccc----cce--eEEEECCCCcEEEecCCCCCh
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDV-NGDNAAPLYKHLKSSKGGLFGDSIK----WNF--SKFLVDKEGNVVERYAPTTSP 213 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~i~----~~P--~~~lid~~G~I~~~~~g~~~~ 213 (227)
.+.+++|+ ++++++|+++ .|. ........| ++. ++| ++||||++|+|++++.|..+.
T Consensus 81 ~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~-------------~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 81 PPTHKIWA-TQSGFTFPLL--SDFWPHGAVSQAY-------------GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp HHHHHHHH-HHHTCCSCEE--ECTTTTTHHHHHT-------------TCEETTTTEECSEEEEECTTSBEEEEEECCTTC
T ss_pred HHHHHHHH-HhcCCCceEE--ecCCcChHHHHHc-------------CCccccCCCeeeeEEEECCCCeEEEEEecCCCC
Confidence 88999999 6779999988 443 122233444 444 678 999999999999999887643
No 53
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.95 E-value=1.1e-27 Score=177.54 Aligned_cols=143 Identities=20% Similarity=0.282 Sum_probs=123.8
Q ss_pred cCCCccCCeEE--ecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDFSV--KDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f~l--~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
.+|+.+|+|++ .+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++ +.+++|++|... ...+.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~--~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSE--DDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCST--TTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCc--cccCH
Confidence 57999999999 78999999999999999999999999999999999999999999987 999999998422 22378
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIK 221 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~ 221 (227)
+.+++|+ ++++++||++ .|.+.. ....| ++.++|+++++|++|+++.++.|..+.+++.+.|+
T Consensus 79 ~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 141 (148)
T 2b5x_A 79 GKIKETA-AEHDITQPIF--VDSDHA-LTDAF-------------ENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVN 141 (148)
T ss_dssp HHHHHHH-HHTTCCSCEE--ECSSCH-HHHHT-------------CCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHH
T ss_pred HHHHHHH-HHcCCCcceE--ECCchh-HHHHh-------------CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHH
Confidence 8999999 7889999987 443332 33333 78889999999999999999999888889999999
Q ss_pred HHhhh
Q 027134 222 KLLET 226 (227)
Q Consensus 222 ~lL~~ 226 (227)
++|++
T Consensus 142 ~~l~~ 146 (148)
T 2b5x_A 142 RVLAE 146 (148)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99875
No 54
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.95 E-value=1.1e-27 Score=187.78 Aligned_cols=157 Identities=15% Similarity=0.160 Sum_probs=117.1
Q ss_pred cCCCcc--CCeEEecCCCCeeecCCCCCCEEEEEEecCCCCc-chHhHHHHHHHHHHHhc---CCcEEEEEeCCCCCCCC
Q 027134 64 QSKTSV--HDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKN---QGLEILAFPCNQFGAQE 137 (227)
Q Consensus 64 ~~g~~~--p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~-C~~~~~~l~~l~~~~~~---~~~~vl~Vs~D~~~~~~ 137 (227)
.+|.++ |+|++.|.+|+.+++++++||++||+||++||++ |+.++|.|+++++++++ .+++|++||+| ++
T Consensus 14 ~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D----~~ 89 (200)
T 2b7k_A 14 GYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD----PA 89 (200)
T ss_dssp --CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC----TT
T ss_pred ccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC----CC
Confidence 667775 9999999999999999999999999999999997 99999999999999985 37999999998 34
Q ss_pred CCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCC---CCCCCccccceeEEEECCCCcEEEecCCCCChh
Q 027134 138 PGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG---GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPL 214 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~ 214 (227)
.++.+.+++|+ ++++.+|+.+.............|+....... ...++.+.|.|++||||++|+|+.++.|..+++
T Consensus 90 ~d~~~~~~~~~-~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~ 168 (200)
T 2b7k_A 90 RDSPAVLKEYL-SDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEK 168 (200)
T ss_dssp TCCHHHHHHHH-TTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTT
T ss_pred CCCHHHHHHHH-HHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHH
Confidence 56889999999 78888887763211111112222321100000 001123567889999999999999999887777
Q ss_pred hHHHHHHHHhh
Q 027134 215 SIEKDIKKLLE 225 (227)
Q Consensus 215 ~l~~~i~~lL~ 225 (227)
.+.+.|.++|+
T Consensus 169 ~~~~~i~~~l~ 179 (200)
T 2b7k_A 169 TGVDKIVEHVK 179 (200)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888877775
No 55
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.95 E-value=1.4e-27 Score=186.74 Aligned_cols=136 Identities=12% Similarity=0.181 Sum_probs=116.7
Q ss_pred cCCCccCCeEEecC--CCC---eeecCCC-CCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 64 QSKTSVHDFSVKDA--KGQ---DVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 64 ~~g~~~p~f~l~~~--~G~---~v~l~~~-~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
.+|+.+|+|++.+. +|+ .++++++ +||++||+|| ++||++|+.++|.|++++++|++++++|++|++|
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 76 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID----- 76 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC-----
Confidence 57999999999999 999 9999999 9999999999 9999999999999999999999989999999998
Q ss_pred CCCCHHHHHHHHHhh-------CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc-----cceeEEEECCCCcEE
Q 027134 137 EPGDNEQIQEFACTR-------FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLVDKEGNVV 204 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~~G~I~ 204 (227)
+.+.+++|+ ++ ++++|+++ .|.++. ....| ++. ++|++||||++|+|+
T Consensus 77 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~~g~~~P~~~lid~~G~i~ 136 (198)
T 1zof_A 77 ---SEQVHFAWK-NTPVEKGGIGQVSFPMV--ADITKS-ISRDY-------------DVLFEEAIALRGAFLIDKNMKVR 136 (198)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCCCSSCEE--ECTTSH-HHHHT-------------TCEETTTEECEEEEEEETTTEEE
T ss_pred ---CHHHHHHHH-HhhhhcccccCceeEEE--ECCchH-HHHHh-------------CCcccCCcccceEEEECCCCEEE
Confidence 678888998 55 78899988 443332 34444 555 799999999999999
Q ss_pred EecCCCC----ChhhHHHHHHHHh
Q 027134 205 ERYAPTT----SPLSIEKDIKKLL 224 (227)
Q Consensus 205 ~~~~g~~----~~~~l~~~i~~lL 224 (227)
+++.|.. +.+++.+.|+++.
T Consensus 137 ~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 137 HAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHH
Confidence 9988754 4567888888765
No 56
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.95 E-value=1.7e-27 Score=180.72 Aligned_cols=140 Identities=11% Similarity=0.080 Sum_probs=109.7
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEec-CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~a-swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|+++|.+|+.+++++++||++||+||+ +||++|+.+++.|++++++| ++++|++||.| +.
T Consensus 16 ~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d--------~~ 85 (163)
T 1psq_A 16 LQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD--------LP 85 (163)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------CH
T ss_pred CCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------CH
Confidence 478999999999999999999999999999999995 99999999999999999999 57999999998 78
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC-----Chhh
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-----SPLS 215 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~-----~~~~ 215 (227)
+.+++|+ +++++ +||++ .|.......+.|+..... . + ...|++||||++|+|++++.|.. +.++
T Consensus 86 ~~~~~~~-~~~~~~~~~~l--~D~~~~~~~~~~gv~~~~----~--g-~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~ 155 (163)
T 1psq_A 86 FAQKRWC-GAEGLDNAIML--SDYFDHSFGRDYALLINE----W--H-LLARAVFVLDTDNTIRYVEYVDNINSEPNFEA 155 (163)
T ss_dssp HHHHHHH-HHHTCTTSEEE--ECTTTCHHHHHHTCBCTT----T--C-SBCCEEEEECTTCBEEEEEECSBTTSCCCHHH
T ss_pred HHHHHHH-HhcCCCCcEEe--cCCchhHHHHHhCCcccc----C--C-ceEEEEEEEcCCCeEEEEEecCCcCCCCCHHH
Confidence 8899998 67799 99988 441122244455221100 0 1 12599999999999999987642 1245
Q ss_pred HHHHHHH
Q 027134 216 IEKDIKK 222 (227)
Q Consensus 216 l~~~i~~ 222 (227)
+.+.|++
T Consensus 156 ~l~~l~~ 162 (163)
T 1psq_A 156 AIAAAKA 162 (163)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555554
No 57
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.95 E-value=1.4e-27 Score=181.70 Aligned_cols=126 Identities=17% Similarity=0.144 Sum_probs=103.9
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|+++|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++ ++++|++||.| +.
T Consensus 20 l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d--------~~ 88 (166)
T 3p7x_A 20 INEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD--------LP 88 (166)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS--------CH
T ss_pred CCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC--------CH
Confidence 47899999999999999999999999999999999 78999999999999999888 56999999987 78
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g 209 (227)
+.+++|+ +++++ +||++ .|.........|+...... + .++|++||||++|+|++++.+
T Consensus 89 ~~~~~~~-~~~~~~~~~~l--~D~~~~~~~~~~gv~~~~~------g-~~~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 89 FAQKRWC-ASAGLDNVITL--SDHRDLSFGENYGVVMEEL------R-LLARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp HHHHHHH-HHHTCSSCEEE--ECTTTCHHHHHHTCEETTT------T-EECCEEEEECTTCBEEEEEEC
T ss_pred HHHHHHH-HHcCCCceEEc--cCCchhHHHHHhCCccccC------C-ceeeEEEEECCCCeEEEEEEc
Confidence 9999999 67799 89998 4552234555663221110 1 138999999999999998554
No 58
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.95 E-value=1.6e-28 Score=187.03 Aligned_cols=152 Identities=19% Similarity=0.298 Sum_probs=119.3
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCc-chHhHHHHHHHHHHHhcC---CcEEEEEeCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKNQ---GLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~-C~~~~~~l~~l~~~~~~~---~~~vl~Vs~D~~~~~~~~ 139 (227)
.+|..+|+|++.|.+| .+++++++||++||+||++||++ |+.++|.|++++++|+++ +++|++|++| ++++
T Consensus 11 ~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d----~~~d 85 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD----PERD 85 (172)
T ss_dssp EEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC----TTTC
T ss_pred ccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC----CCCC
Confidence 5688899999999999 99999999999999999999997 999999999999999864 6999999998 3456
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCC--CCchhhHHHhhhcCCC--CCCCccccceeEEEECCCCcEEEecCCCC--Ch
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNG--DNAAPLYKHLKSSKGG--LFGDSIKWNFSKFLVDKEGNVVERYAPTT--SP 213 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~--~~~~~i~~~P~~~lid~~G~I~~~~~g~~--~~ 213 (227)
+.+.+++|+ ++++.+|+++. |... ......|......... ...+++.++|++|||| +|+|++++.|.. +.
T Consensus 86 ~~~~~~~~~-~~~~~~~~~l~--d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~ 161 (172)
T 2k6v_A 86 PPEVADRYA-KAFHPSFLGLS--GSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEAT 161 (172)
T ss_dssp CHHHHHHHH-HHHCTTEEEEC--CCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCH
T ss_pred CHHHHHHHH-HHhCCCcEEEe--CCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCH
Confidence 889999999 67899999883 3221 1122222211000000 0112578899999999 999999999877 77
Q ss_pred hhHHHHHHHHh
Q 027134 214 LSIEKDIKKLL 224 (227)
Q Consensus 214 ~~l~~~i~~lL 224 (227)
+++.+.|+++|
T Consensus 162 ~~l~~~l~~ll 172 (172)
T 2k6v_A 162 DRVVADLQALL 172 (172)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 88888888765
No 59
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.95 E-value=1.9e-27 Score=188.29 Aligned_cols=137 Identities=13% Similarity=0.155 Sum_probs=117.1
Q ss_pred ccCCCccCCeEEecC--CC--CeeecCCC-CCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA--KG--QDVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G--~~v~l~~~-~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
..+|+.+|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|++++++|++||+|
T Consensus 21 l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D----- 95 (213)
T 2i81_A 21 TYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD----- 95 (213)
T ss_dssp CCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred ccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 378999999999998 89 89999999 9999999999 9999999999999999999999889999999998
Q ss_pred CCCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc-----cceeEEEECCCCcEE
Q 027134 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLVDKEGNVV 204 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~~G~I~ 204 (227)
+.+.+++|+ +++ +++||++ .|.+. .+.+.| ++. ++|++||||++|+|+
T Consensus 96 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l--~D~~~-~~~~~y-------------gv~~~~g~~~p~~~lID~~G~i~ 155 (213)
T 2i81_A 96 ---SKYTHLAWK-KTPLAKGGIGNIKHTLL--SDITK-SISKDY-------------NVLFDDSVSLRAFVLIDMNGIVQ 155 (213)
T ss_dssp ---CHHHHHHHH-SSCGGGTCCCSCSSEEE--ECTTS-HHHHHT-------------TCEETTTEECEEEEEECTTSBEE
T ss_pred ---CHHHHHHHH-HHHHhhCCccCCCceEE--ECCch-HHHHHh-------------CCccccCCcccEEEEECCCCEEE
Confidence 788889998 666 7889988 45332 244444 455 799999999999999
Q ss_pred EecCCCCC----hhhHHHHHHHHh
Q 027134 205 ERYAPTTS----PLSIEKDIKKLL 224 (227)
Q Consensus 205 ~~~~g~~~----~~~l~~~i~~lL 224 (227)
+++.|... .+++.+.|++++
T Consensus 156 ~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 156 HLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHH
Confidence 99876443 667888888776
No 60
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.95 E-value=3.9e-27 Score=171.95 Aligned_cols=134 Identities=17% Similarity=0.212 Sum_probs=116.9
Q ss_pred CCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHH
Q 027134 66 KTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQ 145 (227)
Q Consensus 66 g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~ 145 (227)
|..+|+|++.+.+|+.+++++++||+++|+||++||++|+.+++.|++++++++ ++.+++|+.|. +.+.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~~ 72 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLD-------QVPAMQ 72 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCC-------CHHHHH
Confidence 678999999999999999999999999999999999999999999999999998 69999999985 789999
Q ss_pred HHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 146 EFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
+|+ +++++ +|+++ .|.+.. ....| ++.++|+++++|++|+++ ++.|..+.+++.+.|+++|
T Consensus 73 ~~~-~~~~~~~~~~~--~d~~~~-~~~~~-------------~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 73 EFV-NKYPVKTFTQL--ADTDGS-VWANF-------------GVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HHH-HHTTCTTSEEE--ECTTCH-HHHHT-------------TCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred HHH-HHcCCCceEEE--EcCCcH-HHHHc-------------CCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 998 67788 89987 343322 33333 788899999999999999 8899888999999999988
Q ss_pred hh
Q 027134 225 ET 226 (227)
Q Consensus 225 ~~ 226 (227)
++
T Consensus 135 ~~ 136 (136)
T 1zzo_A 135 SR 136 (136)
T ss_dssp --
T ss_pred cC
Confidence 63
No 61
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.95 E-value=9.4e-28 Score=181.23 Aligned_cols=125 Identities=10% Similarity=0.202 Sum_probs=106.5
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCC--EEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGK--LLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk--~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
..+|+.+|+|++.|.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|++++ +|++||.|
T Consensus 7 ~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d-------- 77 (159)
T 2a4v_A 7 LEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD-------- 77 (159)
T ss_dssp CCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC--------
T ss_pred CCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC--------
Confidence 4789999999999999999999999887 8999997 9999999999999999999999988 99999998
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccc------eeEEEECCCCcEEEecCCCCCh
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWN------FSKFLVDKEGNVVERYAPTTSP 213 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~------P~~~lid~~G~I~~~~~g~~~~ 213 (227)
+.+.+++|+ ++++++||++ .|.++. ..+.| ++... |++||| ++|+|++++.|....
T Consensus 78 ~~~~~~~~~-~~~~~~~~~l--~D~~~~-~~~~~-------------gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 78 SVTSQKKFQ-SKQNLPYHLL--SDPKRE-FIGLL-------------GAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp CHHHHHHHH-HHHTCSSEEE--ECTTCH-HHHHH-------------TCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHH
T ss_pred CHHHHHHHH-HHhCCCceEE--ECCccH-HHHHh-------------CCcccccCCccceEEEE-cCCEEEEEEccCCcc
Confidence 788899999 6779999998 454332 44555 33334 489999 999999999886554
Q ss_pred h
Q 027134 214 L 214 (227)
Q Consensus 214 ~ 214 (227)
.
T Consensus 140 ~ 140 (159)
T 2a4v_A 140 V 140 (159)
T ss_dssp H
T ss_pred c
Confidence 3
No 62
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=188.46 Aligned_cols=143 Identities=10% Similarity=0.108 Sum_probs=114.8
Q ss_pred ccCCCccCCeEEecC---CCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA---KGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~---~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
..+|+.+|+|++.+. +|+.+++++++||++||+|| ++||++|+.++|.|++++++|++++++|++||+|
T Consensus 19 ~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D------- 91 (211)
T 2pn8_A 19 YFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD------- 91 (211)
T ss_dssp CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-------
Confidence 378999999999985 46899999999999999999 9999999999999999999999889999999998
Q ss_pred CCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC
Q 027134 139 GDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (227)
Q Consensus 139 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~ 211 (227)
+.+.+++|+ +++ +++||++ .|.++ .+.+.|+..... . + ..+|++||||++|+|++++.|..
T Consensus 92 -~~~~~~~~~-~~~~~~~g~~~~~fp~l--~D~~~-~~~~~ygv~~~~----~--g-~~~p~~~lID~~G~I~~~~~g~~ 159 (211)
T 2pn8_A 92 -SQFTHLAWI-NTPRRQGGLGPIRIPLL--SDLTH-QISKDYGVYLED----S--G-HTLRGLFIIDDKGILRQITLNDL 159 (211)
T ss_dssp -CHHHHHHHH-TSCGGGTCCCSCSSCEE--ECTTS-HHHHHTTCEETT----T--T-EECEEEEEECTTSBEEEEEEECT
T ss_pred -CHHHHHHHH-HHhhhccCccCCceEEE--ECCch-HHHHHcCCcccC----C--C-cccceEEEECCCCEEEEEEecCC
Confidence 778889998 566 7889988 45433 244445221100 0 0 25899999999999999986643
Q ss_pred ----ChhhHHHHHHHHh
Q 027134 212 ----SPLSIEKDIKKLL 224 (227)
Q Consensus 212 ----~~~~l~~~i~~lL 224 (227)
+.+++.+.|+++.
T Consensus 160 ~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 160 PVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp TBCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhh
Confidence 3466777777765
No 63
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.95 E-value=3.7e-27 Score=184.95 Aligned_cols=136 Identities=17% Similarity=0.225 Sum_probs=116.3
Q ss_pred cCCCccCCeEEecC--CC--CeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDA--KG--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 64 ~~g~~~p~f~l~~~--~G--~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
.+|+.+|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|++++++|++||+|
T Consensus 7 ~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D------- 79 (202)
T 1uul_A 7 EDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD------- 79 (202)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred cCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-------
Confidence 78999999999997 78 899999999999999999 9999999999999999999999888999999998
Q ss_pred CCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc------cceeEEEECCCCcEEE
Q 027134 139 GDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVVE 205 (227)
Q Consensus 139 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~I~~ 205 (227)
+.+.+++|+ +++ +++||++ .|.+. .....| ++. ++|++||||++|+|++
T Consensus 80 -~~~~~~~~~-~~~~~~~~~~~~~~p~l--~D~~~-~~~~~y-------------gv~~~~~g~~~P~~~lid~~G~i~~ 141 (202)
T 1uul_A 80 -SEYSHLAWT-SIERKRGGLGQMNIPIL--ADKTK-CIMKSY-------------GVLKEEDGVAYRGLFIIDPKQNLRQ 141 (202)
T ss_dssp -CHHHHHHHH-HSCGGGTCCCSCSSCEE--ECTTC-HHHHHH-------------TCEETTTTEECEEEEEECTTSBEEE
T ss_pred -CHHHHHHHH-HHHHhhCCCCCCceeEE--ECCch-HHHHHc-------------CCccCCCCceeeEEEEECCCCEEEE
Confidence 678889998 666 7889988 44333 244555 444 7999999999999999
Q ss_pred ecCCCCC----hhhHHHHHHHHh
Q 027134 206 RYAPTTS----PLSIEKDIKKLL 224 (227)
Q Consensus 206 ~~~g~~~----~~~l~~~i~~lL 224 (227)
++.|... .+++.+.|+++.
T Consensus 142 ~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 142 ITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp EEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCHHHHHHHHHHhh
Confidence 9877543 467888888775
No 64
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.95 E-value=1.2e-27 Score=179.16 Aligned_cols=141 Identities=18% Similarity=0.271 Sum_probs=121.4
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
..+|+.+|+|++++.+|+.+++++++ |++||+||++||++|+.+++.|+++++++ ++.+++|++|. .++.+
T Consensus 5 l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~-----~~~~~ 75 (154)
T 3ia1_A 5 VKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREP-----RDTRE 75 (154)
T ss_dssp CCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCT-----TCCHH
T ss_pred CCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCC-----cccHH
Confidence 48899999999999999999999999 99999999999999999999999999999 59999999952 34899
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
.+++|+ ++++++|+++. |... ....+.+.+ ++.++|++||||++|+|+.++.|..+.+++++.|++
T Consensus 76 ~~~~~~-~~~~~~~~~~~--d~~~-~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 141 (154)
T 3ia1_A 76 VVLEYM-KTYPRFIPLLA--SDRD-RPHEVAARF----------KVLGQPWTFVVDREGKVVALFAGRAGREALLDALLL 141 (154)
T ss_dssp HHHHHH-TTCTTEEECBC--CSSC-CHHHHHTTS----------SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHH
T ss_pred HHHHHH-HHcCCCccccc--cccc-chHHHHHHh----------CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHh
Confidence 999999 78899999883 3111 123333222 788899999999999999999999999999999999
Q ss_pred Hhhh
Q 027134 223 LLET 226 (227)
Q Consensus 223 lL~~ 226 (227)
++++
T Consensus 142 ~~~~ 145 (154)
T 3ia1_A 142 AGAD 145 (154)
T ss_dssp TTCC
T ss_pred ccCc
Confidence 8754
No 65
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.95 E-value=7.4e-28 Score=182.50 Aligned_cols=141 Identities=20% Similarity=0.280 Sum_probs=119.7
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC----------
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ---------- 132 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~---------- 132 (227)
..+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|+ ++.|++|++|.
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~ 88 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLN 88 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCC
T ss_pred ccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccc
Confidence 378999999999999999999999999999999999999999999999999999998 69999999981
Q ss_pred -CCCCCCCCHHHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 133 -FGAQEPGDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
.+.++.++.+.+++|+ +++++ +|+++ .| + ......| ++.++|++||||++|+|+. .|.
T Consensus 89 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~d-~-~~~~~~~-------------~v~~~P~~~lid~~G~i~~--~g~ 148 (165)
T 3ha9_A 89 KPGYPPPDTPEMFRKFI-ANYGDPSWIMV--MD-D-GSLVEKF-------------NVRSIDYIVIMDKSSNVLY--AGT 148 (165)
T ss_dssp STTSCCCCCHHHHHHHH-HHHSCTTSEEE--EC-C-SHHHHHT-------------TCCSSSEEEEEETTCCEEE--EEE
T ss_pred cccCCCCCCHHHHHHHH-HHcCCCCeeEE--eC-h-HHHHHHh-------------CCCCceEEEEEcCCCcEEE--eCC
Confidence 2233445899999999 67798 99988 44 2 2244444 7888999999999999998 677
Q ss_pred C-ChhhHHHHHHHHhh
Q 027134 211 T-SPLSIEKDIKKLLE 225 (227)
Q Consensus 211 ~-~~~~l~~~i~~lL~ 225 (227)
. +.+.+++.|+++++
T Consensus 149 ~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 149 TPSLGELESVIKSVQG 164 (165)
T ss_dssp SCCHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHhc
Confidence 6 78889999998874
No 66
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.95 E-value=1.6e-27 Score=181.26 Aligned_cols=130 Identities=13% Similarity=0.087 Sum_probs=104.9
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|++.|.+|+.+++++++||++||+|| ++||++|+.++|.|++++++| ++++|++||.| +.
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~~ 86 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------LP 86 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------CH
T ss_pred CCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------CH
Confidence 37899999999999999999999999999999999 899999999999999999999 67999999988 78
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g 209 (227)
+.+++|+ +++++ +|+++ .|.........|+..... +... + .++|++||||++|+|++++.|
T Consensus 87 ~~~~~~~-~~~~~~~~~~l--~D~~~~~~~~~~gv~~~~-~~~~--g-~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 87 FAQARFC-GAEGIENAKTV--STFRNHALHSQLGVDIQT-GPLA--G-LTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp HHHTTCT-TTTTCTTEEEE--ECTTCTHHHHHTTCEECS-STTT--T-SBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHH-HHcCCCceEEe--eccccchHHHHhCceecc-cccC--C-ccceeEEEEcCCCEEEEEEeC
Confidence 8888998 67899 79988 444222244444222110 0001 1 247999999999999999875
No 67
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.8e-27 Score=201.08 Aligned_cols=146 Identities=19% Similarity=0.268 Sum_probs=126.8
Q ss_pred cccCCCccCCeE-----EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 62 ASQSKTSVHDFS-----VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 62 ~~~~g~~~p~f~-----l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
...+|..+|+|+ +.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.+.
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~-- 127 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA-- 127 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG--
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc--
Confidence 358899999999 9999999999999999999999999999999999999999999999888999999987421
Q ss_pred CCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhH
Q 027134 137 EPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSI 216 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l 216 (227)
..++.+.+++|+ ++++++||++ .|.+.. ....| ++.++|++||||++|+|+.++.|..+.+++
T Consensus 128 ~~d~~~~~~~~~-~~~~l~fpv~--~D~~~~-l~~~y-------------gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l 190 (352)
T 2hyx_A 128 FEKVPGNVAKGA-ANLGISYPIA--LDNNYA-TWTNY-------------RNRYWPAEYLIDATGTVRHIKFGEGDYNVT 190 (352)
T ss_dssp GGGCHHHHHHHH-HHHTCCSCEE--ECTTSH-HHHHT-------------TCCEESEEEEECTTSBEEEEEESBCCHHHH
T ss_pred ccCCHHHHHHHH-HHcCCCccEE--eCCcHH-HHHHc-------------CCCccCEEEEEeCCCeEEEEEcCCCCHHHH
Confidence 224789999999 6789999987 443322 33333 788899999999999999999998889999
Q ss_pred HHHHHHHhhh
Q 027134 217 EKDIKKLLET 226 (227)
Q Consensus 217 ~~~i~~lL~~ 226 (227)
++.|+++|++
T Consensus 191 ~~~I~~lL~e 200 (352)
T 2hyx_A 191 ETLVRQLLND 200 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 68
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.95 E-value=1.9e-27 Score=189.42 Aligned_cols=127 Identities=10% Similarity=0.178 Sum_probs=106.3
Q ss_pred cccCCCccCCeEEecC---CCCeeecCCCCCCEEEEEEec-CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCC
Q 027134 62 ASQSKTSVHDFSVKDA---KGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~---~G~~v~l~~~~gk~vlv~F~a-swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~ 137 (227)
...+|+.+|+|++.+. +|+.+++++++||++||+||+ +||++|+.++|.|++++++|++++++|++||+|
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D------ 112 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD------ 112 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 3488999999999955 559999999999999999996 999999999999999999999989999999998
Q ss_pred CCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc------cceeEEEECCCCcEE
Q 027134 138 PGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVV 204 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~I~ 204 (227)
+.+..++|+ +.+ +++|+++ .|.++ .+...| ++. .+|++||||++|+|+
T Consensus 113 --~~~~~~~~~-~~~~~~~~~~~~~~~~l--~D~~~-~~~~~y-------------gv~~~~~g~~~P~~~lID~~G~I~ 173 (222)
T 3ztl_A 113 --SQYSHLAWD-NLDRKSGGLGHMKIPLL--ADRKQ-EISKAY-------------GVFDEEDGNAFRGLFIIDPNGILR 173 (222)
T ss_dssp --CHHHHHHHH-HSCGGGTSCCSCSSCEE--ECSSS-HHHHHT-------------TCBCTTTSSBCEEEEEECTTSEEE
T ss_pred --CHHHHHHHH-HHhhhhccccccceeEE--eCCch-HHHHHc-------------CCeecCCCCccceEEEECCCCeEE
Confidence 677788887 554 8899988 44443 244444 333 689999999999999
Q ss_pred EecCCCCCh
Q 027134 205 ERYAPTTSP 213 (227)
Q Consensus 205 ~~~~g~~~~ 213 (227)
+++.|..+.
T Consensus 174 ~~~~g~~~~ 182 (222)
T 3ztl_A 174 QITINDKPV 182 (222)
T ss_dssp EEEEECTTB
T ss_pred EEEecCCCC
Confidence 998776543
No 69
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.95 E-value=3.5e-27 Score=183.55 Aligned_cols=136 Identities=17% Similarity=0.185 Sum_probs=114.7
Q ss_pred cCCCccCCeEEecC--CC--CeeecCCC-CCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDA--KG--QDVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (227)
Q Consensus 64 ~~g~~~p~f~l~~~--~G--~~v~l~~~-~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~ 137 (227)
++|+.+|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|++++++|++||+|
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------ 74 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------ 74 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC------
Confidence 36899999999998 99 99999999 9999999999 9999999999999999999999888999999998
Q ss_pred CCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc-----cceeEEEECCCCcEEE
Q 027134 138 PGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLVDKEGNVVE 205 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~~G~I~~ 205 (227)
+.+.+++|+ +++ +++|+++ .|.+. .....| ++. .+|++||||++|+|++
T Consensus 75 --~~~~~~~~~-~~~~~~~~~~~~~~~~l--~D~~~-~~~~~~-------------gv~~~~g~~~P~~~liD~~G~i~~ 135 (192)
T 2h01_A 75 --SKFTHLAWK-KTPLSQGGIGNIKHTLI--SDISK-SIARSY-------------DVLFNESVALRAFVLIDKQGVVQH 135 (192)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSEEE--ECTTS-HHHHHT-------------TCEETTTEECCEEEEECTTSBEEE
T ss_pred --CHHHHHHHH-HhHHhhCCccCCCcCeE--ECCcH-HHHHHh-------------CCcCcCCceeeEEEEEcCCCEEEE
Confidence 788889998 566 7889888 44332 244444 455 6899999999999999
Q ss_pred ecCCCCC----hhhHHHHHHHHh
Q 027134 206 RYAPTTS----PLSIEKDIKKLL 224 (227)
Q Consensus 206 ~~~g~~~----~~~l~~~i~~lL 224 (227)
++.|... .+++.+.|+++.
T Consensus 136 ~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 136 LLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp EEEGGGSSGGGHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCHHHHHHHHHHHh
Confidence 9877432 456777777765
No 70
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=7e-27 Score=170.91 Aligned_cols=132 Identities=16% Similarity=0.260 Sum_probs=114.9
Q ss_pred CccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHH
Q 027134 67 TSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQE 146 (227)
Q Consensus 67 ~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~ 146 (227)
..+|+|++++.+|+.+++++++||+++|+||++||++|+.+++.|++++++++ ++.+++|+.|. +.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA-------DVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCC-------CHHHHHH
Confidence 36899999999999999999999999999999999999999999999999998 69999999985 7899999
Q ss_pred HHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecC---CCCChhhHHHHHHHH
Q 027134 147 FACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA---PTTSPLSIEKDIKKL 223 (227)
Q Consensus 147 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~---g~~~~~~l~~~i~~l 223 (227)
|+ ++++++|+++ .|.+.. ....| ++.++|+++++|++|+++ ++. |..+.+++.+.|+++
T Consensus 73 ~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 73 FV-SKYNLNFTNL--NDADGV-IWARY-------------NVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HH-HHHTCCSEEE--ECTTSH-HHHHT-------------TCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred HH-HHcCCCceEE--ECCchh-HHHhc-------------CCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 99 6779999988 343322 33334 788899999999999999 988 988899999999987
Q ss_pred hh
Q 027134 224 LE 225 (227)
Q Consensus 224 L~ 225 (227)
|+
T Consensus 135 l~ 136 (136)
T 1lu4_A 135 TS 136 (136)
T ss_dssp --
T ss_pred hC
Confidence 64
No 71
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.94 E-value=1.4e-27 Score=181.48 Aligned_cols=143 Identities=14% Similarity=0.139 Sum_probs=113.2
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCC-CCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQ-CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~asw-C~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|++.|.+|+.+++++++||++||+||++| |++|+.++|.|++++++| +++++++|+.| +.
T Consensus 18 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d--------~~ 87 (167)
T 2jsy_A 18 VKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD--------LP 87 (167)
T ss_dssp CCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------SG
T ss_pred cCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------CH
Confidence 47899999999999999999999999999999999999 999999999999999999 56999999998 56
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC-----Chhh
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-----SPLS 215 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~-----~~~~ 215 (227)
+.+++|+ +++++ +||++ .|.........|+..... . + ..+|++||||++|+|++++.|.. +.++
T Consensus 88 ~~~~~~~-~~~~~~~~~~~--~d~~~~~~~~~~~v~~~~----~--g-~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~ 157 (167)
T 2jsy_A 88 FAQARWC-GANGIDKVETL--SDHRDMSFGEAFGVYIKE----L--R-LLARSVFVLDENGKVVYAEYVSEATNHPNYEK 157 (167)
T ss_dssp GGTSCCG-GGSSCTTEEEE--EGGGTCHHHHHTTCBBTT----T--C-SBCCEEEEECTTSCEEEEEECSBTTSCCCSHH
T ss_pred HHHHHHH-HhcCCCCceEe--eCCchhHHHHHhCCcccc----C--C-ceeeEEEEEcCCCcEEEEEecCCcCCCCCHHH
Confidence 6778888 67898 89988 441222234444211000 0 1 12599999999999999986532 3467
Q ss_pred HHHHHHHHhh
Q 027134 216 IEKDIKKLLE 225 (227)
Q Consensus 216 l~~~i~~lL~ 225 (227)
+.+.|+++++
T Consensus 158 l~~~l~~llk 167 (167)
T 2jsy_A 158 PIEAAKALVK 167 (167)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 8888888874
No 72
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.94 E-value=4.2e-27 Score=184.52 Aligned_cols=143 Identities=14% Similarity=0.149 Sum_probs=111.2
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|++.|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++| ++++|++||.| +.
T Consensus 52 l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D--------~~ 121 (200)
T 3zrd_A 52 PQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD--------LP 121 (200)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------CH
T ss_pred CCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------CH
Confidence 48999999999999999999999999999999999 789999999999999999999 57999999988 78
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCC--hhhHHH
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS--PLSIEK 218 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~--~~~l~~ 218 (227)
+.+++|+ +++++ +|+++ .|.........|+...... +.. ++ ++|++||||++|+|++++.+... ..++++
T Consensus 122 ~~~~~~~-~~~~~~~f~~l--~D~~~~~~~~~ygv~~~~~-~~~--g~-~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~ 194 (200)
T 3zrd_A 122 FAQSRFC-GAEGLSNVITL--STLRGADFKQAYGVAITEG-PLA--GL-TARAVVVLDGQDNVIYSELVNEITTEPNYDA 194 (200)
T ss_dssp HHHTTCT-TTTTCTTEEEE--ETTSCTHHHHHTTCEECSS-TTT--TS-BCCEEEEECTTSBEEEEEECSBTTSCCCHHH
T ss_pred HHHHHHH-HHcCCCCceEE--ecCchHHHHHHhCceeecc-cCC--Cc-cccEEEEECCCCeEEEEEecCCcccCCCHHH
Confidence 8899998 78899 99988 4542223455553321110 000 11 57999999999999999765322 223555
Q ss_pred HHHH
Q 027134 219 DIKK 222 (227)
Q Consensus 219 ~i~~ 222 (227)
.|+.
T Consensus 195 ~l~~ 198 (200)
T 3zrd_A 195 ALAA 198 (200)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 73
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.94 E-value=6.2e-27 Score=179.67 Aligned_cols=145 Identities=11% Similarity=0.071 Sum_probs=109.7
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCC-CCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQ-CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~asw-C~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..+|+.+|+|++.|.+|+.+++++++||++||+||++| |++|+.++|.|++++++ ++++|++|++| +.
T Consensus 18 l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D--------~~ 86 (175)
T 1xvq_A 18 PAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD--------LP 86 (175)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------CH
T ss_pred CCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------CH
Confidence 37899999999999999999999999999999999999 99999999999999998 56999999998 67
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC--CCChhhHHH
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP--TTSPLSIEK 218 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g--~~~~~~l~~ 218 (227)
+.+++|+ +++++ +|+++ .|.+ ......|+...... ... + .+.|++||||++|+|++++.| ..+..++++
T Consensus 87 ~~~~~~~-~~~~~~~~~~l--~D~~-~~~~~~~gv~~~~~-~~~--g-~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~ 158 (175)
T 1xvq_A 87 FAQKRFC-GAEGTENVMPA--SAFR-DSFGEDYGVTIADG-PMA--G-LLARAIVVIGADGNVAYTELVPEIAQEPNYEA 158 (175)
T ss_dssp HHHTTCC-------CEEEE--ECTT-SSHHHHTTCBBCSS-TTT--T-SBCSEEEEECTTSBEEEEEECSBTTCCCCHHH
T ss_pred HHHHHHH-HHcCCCCceEe--eCCH-HHHHHHhCCccccc-ccC--C-cccceEEEECCCCeEEEEEECCCcCCCCCHHH
Confidence 8888888 67788 89888 4544 33455553221100 000 1 235999999999999999864 233446888
Q ss_pred HHHHHhhh
Q 027134 219 DIKKLLET 226 (227)
Q Consensus 219 ~i~~lL~~ 226 (227)
.|+.+.++
T Consensus 159 ~l~~l~~~ 166 (175)
T 1xvq_A 159 ALAALGAT 166 (175)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 88777654
No 74
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.94 E-value=1.2e-26 Score=181.38 Aligned_cols=137 Identities=15% Similarity=0.231 Sum_probs=114.6
Q ss_pred ccCCCccCCeEEecC-CC--CeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA-KG--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~-~G--~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
..+|+.+|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|++++++|++|++|
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 77 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD------- 77 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-------
Confidence 378999999999998 88 999999999999999999 9999999999999999999999888999999998
Q ss_pred CCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc------cceeEEEECCCCcEEE
Q 027134 139 GDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVVE 205 (227)
Q Consensus 139 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~I~~ 205 (227)
+.+..++|+ +++ +++||++ .|.++. ....| ++. ++|++||||++|+|++
T Consensus 78 -~~~~~~~~~-~~~~~~~~~~~~~~p~l--~D~~~~-~~~~~-------------gv~~~~~~~~~P~~~lid~~G~i~~ 139 (197)
T 1qmv_A 78 -SQFTHLAWI-NTPRKEGGLGPLNIPLL--ADVTRR-LSEDY-------------GVLKTDEGIAYRGLFIIDGKGVLRQ 139 (197)
T ss_dssp -CHHHHHHHH-TSCGGGTCCCSCSSCEE--ECTTCH-HHHHT-------------TCEETTTTEECEEEEEECTTSBEEE
T ss_pred -CHHHHHHHH-HHHHhhCCCCCCceEEE--ECCcHH-HHHHc-------------CCccCCCCceeeEEEEECCCCcEEE
Confidence 677888888 565 7889988 444332 34444 344 6899999999999999
Q ss_pred ecCCCCC----hhhHHHHHHHHh
Q 027134 206 RYAPTTS----PLSIEKDIKKLL 224 (227)
Q Consensus 206 ~~~g~~~----~~~l~~~i~~lL 224 (227)
++.|..+ .+++.+.|+++.
T Consensus 140 ~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 140 ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp EEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCHHHHHHHHHhcc
Confidence 9877543 456777777664
No 75
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=1.9e-27 Score=180.35 Aligned_cols=133 Identities=15% Similarity=0.148 Sum_probs=108.0
Q ss_pred ccCCCccCCeEEe--cCCC--CeeecCC-CCCCEEEEEEe-cCCCCcch-HhHHHHHHHHHHHhcCCcE-EEEEeCCCCC
Q 027134 63 SQSKTSVHDFSVK--DAKG--QDVDLSI-YKGKLLLIVNV-ASQCGLTN-SNYTELSQLYDKYKNQGLE-ILAFPCNQFG 134 (227)
Q Consensus 63 ~~~g~~~p~f~l~--~~~G--~~v~l~~-~~gk~vlv~F~-aswC~~C~-~~~~~l~~l~~~~~~~~~~-vl~Vs~D~~~ 134 (227)
..+|+.+|+|++. |.+| +.+++++ ++||++||+|| ++|||+|+ .++|.|++++++|+++|++ |++||.|
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d--- 80 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN--- 80 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS---
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC---
Confidence 3789999999986 8999 9999999 89999999999 89999999 9999999999999988999 9999998
Q ss_pred CCCCCCHHHHHHHHHhhCCC--CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 135 AQEPGDNEQIQEFACTRFKA--EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
+.+.+++|+ +++++ +||++ .|.++. ..+.|+...... ..|.+..+.|++|||| +|+|++++.|.
T Consensus 81 -----~~~~~~~~~-~~~~~~~~~~~l--~D~~~~-~~~~~gv~~~~~--~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 -----DPFVMKAWA-KSYPENKHVKFL--ADGSAT-YTHALGLELDLQ--EKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -----CHHHHHHHH-HTCTTCSSEEEE--ECTTSH-HHHHTTCEEEET--TTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHH-HhcCCCCCeEEE--ECCCch-HHHHcCcccccc--cCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 788899999 78888 89988 454432 444553221100 0111234589999999 99999998876
No 76
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.94 E-value=1.6e-26 Score=183.83 Aligned_cols=137 Identities=12% Similarity=0.140 Sum_probs=115.0
Q ss_pred ccCCCccCCeEEec---CCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKD---AKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 63 ~~~g~~~p~f~l~~---~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
..+|+.+|+|++++ .+|+.+++++++||++||+|| ++|||+|+.+++.|++++++|++++++|++||+|
T Consensus 27 l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D------- 99 (220)
T 1zye_A 27 PAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD------- 99 (220)
T ss_dssp CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred ccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-------
Confidence 37899999999985 578999999999999999999 9999999999999999999999889999999998
Q ss_pred CCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccc------cceeEEEECCCCcEEE
Q 027134 139 GDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVVE 205 (227)
Q Consensus 139 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~I~~ 205 (227)
+.+..++|+ +++ +++||++ .|.+. .....| ++. .+|++||||++|+|++
T Consensus 100 -~~~~~~~~~-~~~~~~~g~~~~~fp~l--~D~~~-~i~~~y-------------gv~~~~~g~~~P~~~liD~~G~I~~ 161 (220)
T 1zye_A 100 -SHFSHLAWI-NTPRKNGGLGHMNIALL--SDLTK-QISRDY-------------GVLLEGPGLALRGLFIIDPNGVIKH 161 (220)
T ss_dssp -CHHHHHHHH-TSCGGGTCCCSCSSEEE--ECTTS-HHHHHT-------------TCEETTTTEECEEEEEECTTSBEEE
T ss_pred -CHHHHHHHH-HHHHHhCCCcCCceEEE--ECCcH-HHHHHh-------------CCeecCCCcccceEEEECCCCEEEE
Confidence 677888888 565 7889988 44332 244444 444 7999999999999999
Q ss_pred ecCCCC----ChhhHHHHHHHHh
Q 027134 206 RYAPTT----SPLSIEKDIKKLL 224 (227)
Q Consensus 206 ~~~g~~----~~~~l~~~i~~lL 224 (227)
++.|.. +.+++.+.|++++
T Consensus 162 ~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 162 LSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp EEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEecCCCCCCCHHHHHHHHHHhh
Confidence 887753 3467888888776
No 77
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.94 E-value=8.1e-27 Score=187.77 Aligned_cols=143 Identities=10% Similarity=0.141 Sum_probs=111.1
Q ss_pred cccCCCccCCeEEec---CCCCeeecCCCCCCEEEEEEec-CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCC
Q 027134 62 ASQSKTSVHDFSVKD---AKGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~---~~G~~v~l~~~~gk~vlv~F~a-swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~ 137 (227)
...+|+++|+|++++ .+|+.+++++++||++||+||+ +||++|+.+++.|++++++|+++|++|++||.|
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D------ 120 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD------ 120 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS------
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 347999999999875 4467999999999999999998 999999999999999999999999999999998
Q ss_pred CCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 138 PGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
+.+..++|+ +++ +++||++ .|.++ .+.+.|+...... + ..+|++||||++|+|++++.+.
T Consensus 121 --~~~~~~~~~-~~~~~~~~~~~~~fp~l--~D~~~-~v~~~ygv~~~~~------g-~~~p~~flID~~G~I~~~~~~~ 187 (240)
T 3qpm_A 121 --SQFTHLAWI-ITPRKQGGLGPMKIPLL--SDLTH-QISKDYGVYLEDQ------G-HTLRGLFIIDEKGVLRQITMND 187 (240)
T ss_dssp --CHHHHHHHH-HSCGGGTCCCSCSSCEE--ECTTS-HHHHHTTCEETTT------T-EECEEEEEECTTSBEEEEEEEC
T ss_pred --CHHHHHHHH-HHHHhhcCCCCCceeEE--eCchH-HHHHHhCCccccC------C-CccceEEEEcCCCeEEEEEecC
Confidence 678888888 554 7899988 45443 3455552221110 1 1589999999999999997664
Q ss_pred CC----hhhHHHHHHHH
Q 027134 211 TS----PLSIEKDIKKL 223 (227)
Q Consensus 211 ~~----~~~l~~~i~~l 223 (227)
.. .+++.+.|+.+
T Consensus 188 ~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 188 LPVGRSVDETLRLVQAF 204 (240)
T ss_dssp TTBCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 33 33455555443
No 78
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.94 E-value=1.2e-26 Score=176.28 Aligned_cols=137 Identities=20% Similarity=0.274 Sum_probs=116.8
Q ss_pred ccCCCccCCeEEecC--CCCeeecCCC-CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA--KGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G~~v~l~~~-~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
..+|+.+|+|++.+. +|+.++++++ +||++||+||++||++|+.++|.|++++++ ++.+++|++|.
T Consensus 22 ~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~------- 90 (168)
T 2b1k_A 22 ALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKD------- 90 (168)
T ss_dssp TTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESC-------
T ss_pred cccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCC-------
Confidence 378999999999999 9999999985 999999999999999999999999998876 69999999985
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHH
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKD 219 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (227)
+.+.+++|+ ++++++|+.+. .|.+.. ....| ++.++|++|+||++|+|++++.|..+.+.+.+.
T Consensus 91 ~~~~~~~~~-~~~~~~~~~~~-~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 154 (168)
T 2b1k_A 91 DRQKAISWL-KELGNPYALSL-FDGDGM-LGLDL-------------GVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEE 154 (168)
T ss_dssp CHHHHHHHH-HHHCCCCSEEE-EETTCH-HHHHH-------------TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHT
T ss_pred ChHHHHHHH-HHcCCCCceee-ECcchH-HHHHc-------------CccccCEEEEECCCCeEEEEEeCCCCHHHHHHH
Confidence 788999998 67799998531 343322 33344 788899999999999999999998888889888
Q ss_pred HHHHhhh
Q 027134 220 IKKLLET 226 (227)
Q Consensus 220 i~~lL~~ 226 (227)
|+++|++
T Consensus 155 l~~~l~~ 161 (168)
T 2b1k_A 155 IKPLWEK 161 (168)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 8888753
No 79
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.94 E-value=3e-26 Score=167.18 Aligned_cols=136 Identities=20% Similarity=0.333 Sum_probs=114.2
Q ss_pred ccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHH
Q 027134 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEF 147 (227)
Q Consensus 68 ~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~ 147 (227)
++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|+++++++++ ++.+++|+.+.. ...++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~--~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGH--KGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTS--TTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCC--CchhhHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999654 599999965432 234588999999
Q ss_pred HHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHH
Q 027134 148 ACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 148 ~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
+ ++++. +|+++ .|.+.. ....| ++.++|+++|+|++|+|+.++.|..+.+++.+.|+++
T Consensus 78 ~-~~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 Y-KGLDYKNLPVL--VDPSGK-LLETY-------------GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp H-TTCCCTTCCEE--ECTTCH-HHHHT-------------TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred H-hhcCCCCeeEE--ECcchH-HHHHc-------------CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 9 67788 88887 443332 33344 7888999999999999999999998888888888764
No 80
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=8.1e-27 Score=175.73 Aligned_cols=133 Identities=20% Similarity=0.323 Sum_probs=111.5
Q ss_pred cccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
...+|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.+++|+.|.
T Consensus 14 ~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--------- 84 (158)
T 3hdc_A 14 LVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--------- 84 (158)
T ss_dssp CCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS---------
T ss_pred ccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH---------
Confidence 34889999999999999999999999999999999999999999999999999999998889999999873
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChh--hHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPL--SIEKD 219 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~--~l~~~ 219 (227)
.+++|+ ++++++|+++ .|.+.. ....| ++.++|++||||++|+|+.++.|..+.+ ++.+.
T Consensus 85 -~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~ 146 (158)
T 3hdc_A 85 -RFPEKY-RRAPVSFNFL--SDATGQ-VQQRY-------------GANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSY 146 (158)
T ss_dssp -SCCGGG-GGCCCSCEEE--ECTTSH-HHHHT-------------TCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHH
T ss_pred -HHHHHH-HHcCCCceEE--ECchHH-HHHHh-------------CCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHH
Confidence 356666 6779999988 443332 33444 7888999999999999999999977654 34444
Q ss_pred HH
Q 027134 220 IK 221 (227)
Q Consensus 220 i~ 221 (227)
+.
T Consensus 147 ~~ 148 (158)
T 3hdc_A 147 LK 148 (158)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 81
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=6.3e-27 Score=178.49 Aligned_cols=134 Identities=11% Similarity=0.171 Sum_probs=106.5
Q ss_pred ccCCCccCCeEEe-cCCCCeeecCCC-CCCEEEEEEe-cCCCCcchH-hHHHHHHHHHHHhcCCc-EEEEEeCCCCCCCC
Q 027134 63 SQSKTSVHDFSVK-DAKGQDVDLSIY-KGKLLLIVNV-ASQCGLTNS-NYTELSQLYDKYKNQGL-EILAFPCNQFGAQE 137 (227)
Q Consensus 63 ~~~g~~~p~f~l~-~~~G~~v~l~~~-~gk~vlv~F~-aswC~~C~~-~~~~l~~l~~~~~~~~~-~vl~Vs~D~~~~~~ 137 (227)
..+|+.+|+|+++ +.+|+.++++++ +||++||+|| ++|||+|+. ++|.|++++++|+++|+ +|++||.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 3789999999999 999999999998 9999999986 999999999 99999999999999999 99999988
Q ss_pred CCCHHHHHHHHHhhCCCC--ccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC
Q 027134 138 PGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~ 211 (227)
+.+.+++|+ ++++++ ||++ .|.++. ....|+...... ...| .....|++||| ++|+|+++..+..
T Consensus 77 --~~~~~~~~~-~~~~~~~~fp~l--~D~~~~-~~~~~gv~~~~~-~~~g-~~~~~p~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 77 --DSFVMDAWG-KAHGADDKVQML--ADPGGA-FTKAVDMELDLS-AVLG-NVRSKRYSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp --CHHHHHHHH-HHTTCTTTSEEE--ECTTSH-HHHHTTCEECCH-HHHS-SCEECCEEEEE-ETTEEEEEEECTT
T ss_pred --CHHHHHHHH-HhcCCCcceEEE--ECCCCc-HHHHcCCccccc-cccC-cccceEEEEEE-eCCEEEEEEecCC
Confidence 678899998 677998 9988 454433 444442211000 0000 12345999999 9999999977643
No 82
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.94 E-value=1.5e-26 Score=173.29 Aligned_cols=138 Identities=19% Similarity=0.298 Sum_probs=114.9
Q ss_pred ccCCCccCCeEEecCCC--------CeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKG--------QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFG 134 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G--------~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~ 134 (227)
..+|+.+|+|++++.+| +.+++++++||++||+||++||++|+.+++.|++++++ .++.+++|++|.
T Consensus 8 ~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~~-- 82 (156)
T 1kng_A 8 ALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYKD-- 82 (156)
T ss_dssp ----CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEESC--
T ss_pred HHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECCC--
Confidence 37899999999999999 99999999999999999999999999999999998876 349999999985
Q ss_pred CCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChh
Q 027134 135 AQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPL 214 (227)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~ 214 (227)
+.+.+++|+ ++++++|+.+. .|... .....| ++.++|++|++|++|+++.++.|..+.+
T Consensus 83 -----~~~~~~~~~-~~~~~~~~~~~-~d~~~-~~~~~~-------------~v~~~P~~~~id~~G~i~~~~~g~~~~~ 141 (156)
T 1kng_A 83 -----AADNARRFL-GRYGNPFGRVG-VDANG-RASIEW-------------GVYGVPETFVVGREGTIVYKLVGPITPD 141 (156)
T ss_dssp -----CHHHHHHHH-HHHCCCCSEEE-EETTS-HHHHHT-------------TCCSSCEEEEECTTSBEEEEEESCCCHH
T ss_pred -----CHHHHHHHH-HHcCCCCceee-eCchh-HHHHhc-------------CcCccCeEEEEcCCCCEEEEEeCCCCHH
Confidence 789999998 67799998331 33322 233333 7888999999999999999999998888
Q ss_pred hHHHHHHHHhhh
Q 027134 215 SIEKDIKKLLET 226 (227)
Q Consensus 215 ~l~~~i~~lL~~ 226 (227)
.+.+.|+++|++
T Consensus 142 ~l~~~l~~~l~~ 153 (156)
T 1kng_A 142 NLRSVLLPQMEK 153 (156)
T ss_dssp HHHHTHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899989888764
No 83
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.94 E-value=5.9e-27 Score=177.03 Aligned_cols=141 Identities=18% Similarity=0.180 Sum_probs=117.3
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
..|..+| +++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+.+++.|++|++|.. ...++.+.
T Consensus 15 ~~~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~--~~~~~~~~ 90 (164)
T 2h30_A 15 TVPHTMS--TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGF--LHEKKDGE 90 (164)
T ss_dssp CHHHHHT--TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTS--TTCCCTTH
T ss_pred ccCCcCC--ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCC--ccccCHHH
Confidence 3455566 8899999999999999999999999999999999999999999999988999999999853 23346788
Q ss_pred HHHHHHhhCCCC-ccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 144 IQEFACTRFKAE-FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 144 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
+++|+ ++++++ +++. .|.... ....| ++.++|++||||++|+++.++.|..+.+++.+.|++
T Consensus 91 ~~~~~-~~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 153 (164)
T 2h30_A 91 FQKWY-AGLNYPKLPVV--TDNGGT-IAQNL-------------NISVYPSWALIGKDGDVQRIVKGSINEAQALALIRN 153 (164)
T ss_dssp HHHHH-TTSCCTTSCEE--ECTTCH-HHHHT-------------TCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHC
T ss_pred HHHHH-HhCCCCcceEE--EcCchH-HHHHc-------------CCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 88888 566776 6665 343322 33333 788899999999999999999998889999999998
Q ss_pred Hhh
Q 027134 223 LLE 225 (227)
Q Consensus 223 lL~ 225 (227)
+++
T Consensus 154 ~~~ 156 (164)
T 2h30_A 154 PNA 156 (164)
T ss_dssp TTC
T ss_pred HHH
Confidence 875
No 84
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=3.4e-26 Score=175.28 Aligned_cols=146 Identities=17% Similarity=0.210 Sum_probs=111.7
Q ss_pred ccCCCccCCeEEe-cCCCCeeecCC-CCCCEEEEEE-ecCCCCcch-HhHHHHHHHHHHHhcCCcEEEE-EeCCCCCCCC
Q 027134 63 SQSKTSVHDFSVK-DAKGQDVDLSI-YKGKLLLIVN-VASQCGLTN-SNYTELSQLYDKYKNQGLEILA-FPCNQFGAQE 137 (227)
Q Consensus 63 ~~~g~~~p~f~l~-~~~G~~v~l~~-~~gk~vlv~F-~aswC~~C~-~~~~~l~~l~~~~~~~~~~vl~-Vs~D~~~~~~ 137 (227)
..+|+++|+|++. +.+|+.+++++ ++||++||.| |++|||+|+ .++|.|++++++|+++|++|++ ||.|
T Consensus 15 ~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D------ 88 (173)
T 3mng_A 15 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN------ 88 (173)
T ss_dssp CCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS------
T ss_pred CCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC------
Confidence 3889999999999 99999999999 6999766655 599999999 5999999999999999999997 9988
Q ss_pred CCCHHHHHHHHHhhCCCC--ccceeeeccCCCCchhhHHHhhhcCC-CCCCCccccceeEEEECCCCcEEEecCCCCC--
Q 027134 138 PGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKG-GLFGDSIKWNFSKFLVDKEGNVVERYAPTTS-- 212 (227)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~-- 212 (227)
+.+..++|+ ++++++ ||++ .|.++. +...|+....... +..| +....|++|||| +|+|++.+++...
T Consensus 89 --~~~~~~~f~-~~~~~~~~fp~l--~D~~~~-va~~yGv~~~~~~~~~~g-~~~~~r~tfvID-dG~I~~~~v~~~~~g 160 (173)
T 3mng_A 89 --DAFVTGEWG-RAHKAEGKVRLL--ADPTGA-FGKETDLLLDDSLVSIFG-NRRLKRFSMVVQ-DGIVKALNVEPDGTG 160 (173)
T ss_dssp --CHHHHHHHH-HHTTCTTTCEEE--ECTTCH-HHHHHTCBCCSTTHHHHS-SCCBCCEEEEEE-TTEEEEEEECTTSSC
T ss_pred --CHHHHHHHH-HHhCCCCceEEE--ECCChH-HHHHhCCCcccccccccC-CcceEEEEEEEE-CCEEEEEEEeCCCCC
Confidence 788899998 677888 9988 565543 5555643321000 0001 234579999999 9999999887542
Q ss_pred --hhhHHHHHHH
Q 027134 213 --PLSIEKDIKK 222 (227)
Q Consensus 213 --~~~l~~~i~~ 222 (227)
.++.++.|++
T Consensus 161 ~~~~~~~~vl~~ 172 (173)
T 3mng_A 161 LTCSLAPNIISQ 172 (173)
T ss_dssp SSTTSHHHHHHH
T ss_pred cchHHHHHHHHh
Confidence 3345555543
No 85
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.94 E-value=3.1e-26 Score=185.68 Aligned_cols=144 Identities=9% Similarity=0.123 Sum_probs=112.5
Q ss_pred ccccCCCccCCeEEec---CCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 61 MASQSKTSVHDFSVKD---AKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 61 ~~~~~g~~~p~f~l~~---~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
....+|+.+|+|++.+ .+|+.++|++++||++||+|| ++||++|+.+++.|++++++|+++|++|++||+|
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D----- 134 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 134 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC-----
Confidence 3447999999999774 567899999999999999999 9999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC
Q 027134 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g 209 (227)
+.+..++|+ +++ +++||++ .|.++ .+...|+.+.... + ..+|++||||++|+|++++.+
T Consensus 135 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l--~D~~~-~va~~ygv~~~~~------g-~~~p~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 135 ---SQFTHLAWI-NTPRRQGGLGPIRIPLL--SDLTH-QISKDYGVYLEDS------G-HTLRGLFIIDDKGILRQITLN 200 (254)
T ss_dssp ---CHHHHHHHH-TSCGGGTSCCSCSSCEE--ECTTS-HHHHHHTCEETTT------T-EECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHH-HHHHHhcCCccccccee--eCcHH-HHHHHcCCccccC------C-CccceEEEECCCCeEEEEEec
Confidence 788888888 554 7899988 45443 3555553321110 1 247999999999999999776
Q ss_pred CCC----hhhHHHHHHHH
Q 027134 210 TTS----PLSIEKDIKKL 223 (227)
Q Consensus 210 ~~~----~~~l~~~i~~l 223 (227)
... .+++.+.|+.+
T Consensus 201 ~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 201 DLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp CTTCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhh
Confidence 333 34455555543
No 86
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=2.7e-28 Score=183.84 Aligned_cols=140 Identities=20% Similarity=0.317 Sum_probs=114.9
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHH-HHHHHh-cCCcEEEEEeCCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ-LYDKYK-NQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~-l~~~~~-~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
..+|+.+|+|++++.+|+.+++++++||++||+||++||++|+.++|.|++ ++++++ +.++.+++|++|. +
T Consensus 7 l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~-------~ 79 (159)
T 2ls5_A 7 VRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDE-------P 79 (159)
Confidence 378999999999999999999999999999999999999999999999998 999998 6789999999984 5
Q ss_pred HHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
.+.+++|. ++++++||++ .|.++. ....|+. .+.++|++||||++|+|++++.|. +++++++.|
T Consensus 80 ~~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~~~-----------~~~~~P~~~lid~~G~i~~~~~g~-~~~~l~~~l 143 (159)
T 2ls5_A 80 LEKVLAFA-KSTGVTYPLG--LDPGAD-IFAKYAL-----------RDAGITRNVLIDREGKIVKLTRLY-NEEEFASLV 143 (159)
Confidence 56788888 6789999988 443332 3334411 245589999999999999998874 455677777
Q ss_pred HHHhh
Q 027134 221 KKLLE 225 (227)
Q Consensus 221 ~~lL~ 225 (227)
+++.+
T Consensus 144 ~~l~~ 148 (159)
T 2ls5_A 144 QQINE 148 (159)
Confidence 66543
No 87
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.93 E-value=6.8e-27 Score=180.89 Aligned_cols=145 Identities=14% Similarity=0.114 Sum_probs=111.4
Q ss_pred ccCCCccCCeEEecC--CC-CeeecCC-CCCCEE-EEEEecCCCCcchH-hHHHHHHHHHHHhcCCcE-EEEEeCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA--KG-QDVDLSI-YKGKLL-LIVNVASQCGLTNS-NYTELSQLYDKYKNQGLE-ILAFPCNQFGA 135 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G-~~v~l~~-~~gk~v-lv~F~aswC~~C~~-~~~~l~~l~~~~~~~~~~-vl~Vs~D~~~~ 135 (227)
.++|+.+|+|++.+. +| +.+++++ ++||++ |++||++|||+|+. ++|.|++++++|+++|++ |++||.|
T Consensus 26 l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d---- 101 (184)
T 3uma_A 26 IAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN---- 101 (184)
T ss_dssp CCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS----
T ss_pred CCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC----
Confidence 489999999999998 99 9999999 899965 55566999999999 899999999999999999 9999998
Q ss_pred CCCCCHHHHHHHHHhhCCCC--ccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCC-
Q 027134 136 QEPGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS- 212 (227)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~- 212 (227)
+.+..++|+ ++++++ ||++ .|.++. +.+.|+...... ..|-++...|++|||| +|+|++++.+..+
T Consensus 102 ----~~~~~~~f~-~~~~~~~~fp~l--~D~~~~-va~~yGv~~~~~--~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g 170 (184)
T 3uma_A 102 ----DLHVMGAWA-THSGGMGKIHFL--SDWNAA-FTKAIGMEIDLS--AGTLGIRSKRYSMLVE-DGVVKALNIEESPG 170 (184)
T ss_dssp ----CHHHHHHHH-HHHTCTTTSEEE--ECTTCH-HHHHTTCEEEEG--GGTCEEEECCEEEEEE-TTEEEEEEECSSTT
T ss_pred ----CHHHHHHHH-HHhCCCCceEEE--EcCchH-HHHHcCCceecc--ccCCcccceeEEEEEC-CCEEEEEEEeCCCC
Confidence 788899998 677998 9999 565543 455553321110 0011234578999996 9999999887533
Q ss_pred ---hhhHHHHHHH
Q 027134 213 ---PLSIEKDIKK 222 (227)
Q Consensus 213 ---~~~l~~~i~~ 222 (227)
...+++.|++
T Consensus 171 ~~~~~~~~~vL~~ 183 (184)
T 3uma_A 171 QATASGAAAMLEL 183 (184)
T ss_dssp CCSTTSHHHHHHH
T ss_pred CCcCCCHHHHHhh
Confidence 2345555543
No 88
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.93 E-value=6.3e-26 Score=181.58 Aligned_cols=149 Identities=13% Similarity=0.200 Sum_probs=115.5
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCC-EEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGK-LLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk-~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~ 140 (227)
..+|+.+|+|++.+.+| .+++++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++|++||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 37899999999999999 9999999998 9999998 9999999999999999999999999999999998 6
Q ss_pred HHHHHHHHHh-----hC--CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC--
Q 027134 141 NEQIQEFACT-----RF--KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-- 211 (227)
Q Consensus 141 ~~~~~~~~~~-----~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~-- 211 (227)
.+..++|++. ++ +++||++ .|.++. +...|+..........+ ....+|++||||++|+|++++.+..
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil--~D~~~~-va~~ygv~~~~~~~~~g-~~~~~p~~fiID~~G~I~~~~~~~~~~ 149 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPII--ADETRE-LAVKLGMVDPDERTSTG-MPLTCRAVFIIGPDKKLKLSILYPATT 149 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEE--ECTTCH-HHHHTTCEEEEEECTTC-CEEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEE--ECChHH-HHHHhCCcCcccccCCC-cccccceEEEECCCCEEEEEEecCCCC
Confidence 7777788731 56 8899998 454433 45555432111000001 1235899999999999999876532
Q ss_pred --ChhhHHHHHHHHh
Q 027134 212 --SPLSIEKDIKKLL 224 (227)
Q Consensus 212 --~~~~l~~~i~~lL 224 (227)
+.+++.+.|+.+.
T Consensus 150 gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 150 GRNFSEILRVIDSLQ 164 (233)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 3567888887765
No 89
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=1.7e-25 Score=178.34 Aligned_cols=147 Identities=14% Similarity=0.157 Sum_probs=113.2
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCC-E-EEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGK-L-LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk-~-vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
.+|+.+|+|++.+.+| .+++++++|| + ||++||++|||+|+.+++.|++++++|+++|++|++||+| +.
T Consensus 6 ~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D--------~~ 76 (224)
T 1prx_A 6 LLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID--------SV 76 (224)
T ss_dssp CTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------CH
T ss_pred CCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------CH
Confidence 7899999999999999 9999999998 4 5566689999999999999999999999999999999998 66
Q ss_pred HHHHHHHHhh----------CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC
Q 027134 142 EQIQEFACTR----------FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (227)
Q Consensus 142 ~~~~~~~~~~----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~ 211 (227)
+..++|+ ++ ++++||++ .|.++. +...|+.......+..| ....+|++||||++|+|++++.+..
T Consensus 77 ~~~~~~~-~~i~~~~~~~~~~~~~fpil--~D~~~~-va~~ygv~~~~~~~~~g-~~~~~p~~fiID~~G~I~~~~~~~~ 151 (224)
T 1prx_A 77 EDHLAWS-KDINAYNSEEPTEKLPFPII--DDRNRE-LAILLGMLDPAEKDEKG-MPVTARVVFVFGPDKKLKLSILYPA 151 (224)
T ss_dssp HHHHHHH-HHHHHHTTSCCCSCCSSCEE--ECTTCH-HHHHTTSSCSCTTCSSS-CCTTCCEEEEECTTSBEEEEEECCT
T ss_pred HHHHHHH-HHHHHhhCcccccCcCccee--ecCchH-HHHHhCCCCcccccCCC-ccccceEEEEECCCCEEEEEEecCC
Confidence 7777777 33 78999998 454333 45555433211000001 1235899999999999999986532
Q ss_pred ----ChhhHHHHHHHHh
Q 027134 212 ----SPLSIEKDIKKLL 224 (227)
Q Consensus 212 ----~~~~l~~~i~~lL 224 (227)
+.+++.+.|+.+.
T Consensus 152 ~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 152 TTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TBCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 4567888888765
No 90
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=5.9e-25 Score=173.93 Aligned_cols=144 Identities=13% Similarity=0.098 Sum_probs=112.5
Q ss_pred ccCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCC-CCcch-----HhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQ-CGLTN-----SNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~asw-C~~C~-----~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
..+|+.+|+|+|.|.+|+.+++++++||++||+||++| ||+|. .+++.++++ | +|++|++||.|
T Consensus 22 l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D----- 91 (224)
T 3keb_A 22 PRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD----- 91 (224)
T ss_dssp CCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS-----
T ss_pred CCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC-----
Confidence 38899999999999999999999999999999999887 99999 889888887 5 67999999998
Q ss_pred CCCCHHHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC-----C
Q 027134 137 EPGDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP-----T 210 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g-----~ 210 (227)
+.+..++|+ +++++ +|+++ .|.....+...|+...... ... + ...|++||||++|+|++++.. .
T Consensus 92 ---s~~~~~~f~-~~~gl~~fplL--sD~~~~~vak~yGv~~~~~-~~~--G-~~~p~tfvID~dG~I~~~~~~~~~~~~ 161 (224)
T 3keb_A 92 ---SPSSLARAR-HEHGLPNIALL--STLRGRDFHKRYGVLITEY-PLS--G-YTSPAIILADAANVVHYSERLANTRDF 161 (224)
T ss_dssp ---CHHHHHHHH-HHHCCTTCEEE--ESTTCTTHHHHTTCBCCST-TST--T-CBCCEEEEECTTCBEEEEEECSBTTCC
T ss_pred ---CHHHHHHHH-HHcCCCCceEE--EcCCchHHHHHhCCccccc-ccc--C-CccCEEEEEcCCCEEEEEEecCCCCCC
Confidence 788999999 67788 69998 5553233566664332110 001 1 237999999999999998553 3
Q ss_pred CChhhHHHHHHHHhhh
Q 027134 211 TSPLSIEKDIKKLLET 226 (227)
Q Consensus 211 ~~~~~l~~~i~~lL~~ 226 (227)
.+.+++.+.|+.+.++
T Consensus 162 pd~~evl~~L~~l~~~ 177 (224)
T 3keb_A 162 FDFDAIEKLLQEGEQQ 177 (224)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhc
Confidence 4567788888777653
No 91
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.93 E-value=1.9e-25 Score=177.50 Aligned_cols=148 Identities=16% Similarity=0.225 Sum_probs=112.9
Q ss_pred ccCCCccCCeEEecC--CCCeeecCCCCCC-EEEE-EEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA--KGQDVDLSIYKGK-LLLI-VNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G~~v~l~~~~gk-~vlv-~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~ 138 (227)
..+|+.+|+|++.+. +| .+++++++|| ++|| +||++|||+|+.+++.|++++++|+++|++|++||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 378999999999999 99 8999999998 5544 5589999999999999999999999999999999998
Q ss_pred CCHHHHHHHHH------hhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCc-cccceeEEEECCCCcEEEecCCC-
Q 027134 139 GDNEQIQEFAC------TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS-IKWNFSKFLVDKEGNVVERYAPT- 210 (227)
Q Consensus 139 ~~~~~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-i~~~P~~~lid~~G~I~~~~~g~- 210 (227)
+.+..++|.+ .+++++||++ .|.++. +...|+.+..... .+.+ ...+|++||||++|+|++++.+.
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil--~D~~~~-va~~ygv~~~~~~--~~~g~~~~~p~~flID~~G~I~~~~~~~~ 148 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIV--CDESRE-LANKLKIMDEQEK--DITGLPLTCRCLFFISPEKKIKATVLYPA 148 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEE--ECTTSH-HHHHHTCEEEEEE--CTTSCEEECEEEEEECTTSBEEEEEEECT
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeE--ECchhH-HHHHhCCCCcccc--cCCCCCcccceEEEECCCCEEEEEEecCC
Confidence 5666677763 1578999998 454433 4555643321100 0001 23589999999999999987643
Q ss_pred ---CChhhHHHHHHHHh
Q 027134 211 ---TSPLSIEKDIKKLL 224 (227)
Q Consensus 211 ---~~~~~l~~~i~~lL 224 (227)
.+.+++.+.|+.+.
T Consensus 149 ~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 149 TTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp TBCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 24667888888765
No 92
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=2.3e-25 Score=170.45 Aligned_cols=135 Identities=16% Similarity=0.215 Sum_probs=103.7
Q ss_pred ccCCCccCCeEEecC----CC-----CeeecCCC-CCC-EEEEEEecCCCCcchHh-HHHHHHHHHHHhcCCcE-EEEEe
Q 027134 63 SQSKTSVHDFSVKDA----KG-----QDVDLSIY-KGK-LLLIVNVASQCGLTNSN-YTELSQLYDKYKNQGLE-ILAFP 129 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~----~G-----~~v~l~~~-~gk-~vlv~F~aswC~~C~~~-~~~l~~l~~~~~~~~~~-vl~Vs 129 (227)
..+|+.+|+|++++. +| +.++++++ +|| +||++||++|||+|+.+ +|.|++++++|+++|++ |++||
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 467889999999998 57 99999996 997 66778999999999999 99999999999999999 99999
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhCCC--CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEec
Q 027134 130 CNQFGAQEPGDNEQIQEFACTRFKA--EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY 207 (227)
Q Consensus 130 ~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~ 207 (227)
.| +.+.+++|+ +++++ +||++ .|.++. ....|+...... ..+.+++..|++|+|| +|+|++++
T Consensus 87 ~d--------~~~~~~~~~-~~~~~~~~fp~l--~D~~~~-~~~~ygv~~~~~--~~~~g~~~~~~t~~I~-~G~I~~~~ 151 (171)
T 2pwj_A 87 IN--------DPYTVNAWA-EKIQAKDAIEFY--GDFDGS-FHKSLELTTDLS--AGLLGIRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp SS--------CHHHHHHHH-HHTTCTTTSEEE--ECTTCH-HHHHHTCEEECT--TTTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CC--------CHHHHHHHH-HHhCCCCceEEE--ECCccH-HHHHhCCccccc--cccCCcccceeEEEEE-CCEEEEEE
Confidence 88 678889998 67785 79988 565443 455554321110 0111334567899999 99999998
Q ss_pred CCCCC
Q 027134 208 APTTS 212 (227)
Q Consensus 208 ~g~~~ 212 (227)
.|...
T Consensus 152 ~~~~~ 156 (171)
T 2pwj_A 152 VEESP 156 (171)
T ss_dssp ECSST
T ss_pred eecCC
Confidence 87543
No 93
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=3.3e-25 Score=178.35 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=107.7
Q ss_pred ccCCCccCCeEEecC-CCC--eeecCC-CCCCEEEEEEe-cCCCCcch-HhHHHHHHHHHHHhcCCc-EEEEEeCCCCCC
Q 027134 63 SQSKTSVHDFSVKDA-KGQ--DVDLSI-YKGKLLLIVNV-ASQCGLTN-SNYTELSQLYDKYKNQGL-EILAFPCNQFGA 135 (227)
Q Consensus 63 ~~~g~~~p~f~l~~~-~G~--~v~l~~-~~gk~vlv~F~-aswC~~C~-~~~~~l~~l~~~~~~~~~-~vl~Vs~D~~~~ 135 (227)
..+|+.+|+|++.+. +|+ .+++++ ++||++||+|| ++|||+|+ .++|.|++++++|+++|+ +|++||.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 378999999999996 787 999999 89999999999 99999999 999999999999999999 99999988
Q ss_pred CCCCCHHHHHHHHHhhCCCC-ccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCC
Q 027134 136 QEPGDNEQIQEFACTRFKAE-FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS 212 (227)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~ 212 (227)
+.+.+++|+ ++++++ ||++ .|.++. ....|+..... +..|-+....|++||| ++|+|++++.|...
T Consensus 79 ----~~~~~~~~~-~~~~~~~~~~l--~D~~~~-~~~~~gv~~~~--~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~ 145 (241)
T 1nm3_A 79 ----DTFVMNAWK-EDEKSENISFI--PDGNGE-FTEGMGMLVGK--EDLGFGKRSWRYSMLV-KNGVVEKMFIEPNE 145 (241)
T ss_dssp ----CHHHHHHHH-HHTTCTTSEEE--ECTTSH-HHHHTTCEEEC--TTTTCCEEECCEEEEE-ETTEEEEEEECCSC
T ss_pred ----CHHHHHHHH-HhcCCCceEEE--ECCCcH-HHHHhCceeec--ccccCcccceeEEEEE-ECCEEEEEEEeccC
Confidence 678899998 677886 9988 454433 44455322110 0011112356999999 99999999887543
No 94
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.92 E-value=2.4e-25 Score=164.94 Aligned_cols=122 Identities=17% Similarity=0.230 Sum_probs=99.6
Q ss_pred cCCCccCC-eEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHD-FSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~-f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..|+.+|+ |++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|++ ++++|++|++|. +.
T Consensus 2 ~~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~-------~~ 74 (144)
T 1i5g_A 2 GLKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE-------SA 74 (144)
T ss_dssp TTTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SH
T ss_pred chhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CH
Confidence 46788999 9999999999999999999999999999999999999999999999985 579999999985 78
Q ss_pred HHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEEC-CCCcEEEecC
Q 027134 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVD-KEGNVVERYA 208 (227)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid-~~G~I~~~~~ 208 (227)
+.+++|+ ++++. .+|+.. .|. ...+.+.+ ++.++|+++|+| ++|+|+.+..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~d~----~~~~~~~~----------~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 75 EDFKDYY-AKMPWLALPFED-RKG----MEFLTTGF----------DVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHHHH-TTCSSEECCTTC-HHH----HHHHHHHT----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HhCCccccccCc-hHH----HHHHHHHc----------CCCCCCEEEEEECCCCcEEeccc
Confidence 8999998 55442 344330 011 12222222 788899999999 9999998864
No 95
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.92 E-value=9.6e-25 Score=176.01 Aligned_cols=143 Identities=17% Similarity=0.263 Sum_probs=112.5
Q ss_pred cCCCccCCeEEecCCCCeeec-CCC--CCCEE-EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDL-SIY--KGKLL-LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l-~~~--~gk~v-lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
.+|+.+|+|++.+.+| .+++ +++ +||++ |++||++||++|+.+++.|++++++|+++|++|++||+|
T Consensus 6 ~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D-------- 76 (249)
T 3a2v_A 6 LIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD-------- 76 (249)
T ss_dssp CTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------
T ss_pred CCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC--------
Confidence 7899999999999999 7999 999 99975 557889999999999999999999999999999999998
Q ss_pred CHHHHHHHHHh-----hCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC---
Q 027134 140 DNEQIQEFACT-----RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--- 211 (227)
Q Consensus 140 ~~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~--- 211 (227)
+.....+|... ..+++||++ .|.++. +...|+...... ++.++|++||||++|+|+.+..|..
T Consensus 77 s~~~~~~w~~~~~~~~~~~i~fPil--~D~~~~-ia~~ygv~~~~~------g~~~~p~~fIID~dG~I~~~~~~~~~~g 147 (249)
T 3a2v_A 77 SVFSHIKWKEWIERHIGVRIPFPII--ADPQGT-VARRLGLLHAES------ATHTVRGVFIVDARGVIRTMLYYPMELG 147 (249)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCSCEE--ECTTSH-HHHHHTCCCTTC------SSSCCEEEEEECTTSBEEEEEEECTTBC
T ss_pred CHHHHHHHHHHHHHhcCCCCceeEE--ECCchH-HHHHhCCccccC------CCcccceEEEECCCCeEEEEEecCCccc
Confidence 56666666521 147899988 454433 455553321110 2337899999999999999977654
Q ss_pred -ChhhHHHHHHHHh
Q 027134 212 -SPLSIEKDIKKLL 224 (227)
Q Consensus 212 -~~~~l~~~i~~lL 224 (227)
+.+++.+.|+.+.
T Consensus 148 r~~~Ellr~I~alq 161 (249)
T 3a2v_A 148 RLVDEILRIVKALK 161 (249)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH
Confidence 4677888888775
No 96
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-24 Score=170.14 Aligned_cols=144 Identities=16% Similarity=0.221 Sum_probs=114.2
Q ss_pred ccccCCCccCCeEEe---cCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCC
Q 027134 61 MASQSKTSVHDFSVK---DAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (227)
Q Consensus 61 ~~~~~g~~~p~f~l~---~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~ 136 (227)
+.+++|+++|+|+++ |.+|++++|+||+||++||+|| +.|||.|..|++.+++.+++|+++|++|++||.|
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D----- 95 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD----- 95 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS-----
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC-----
Confidence 345899999999976 6677899999999999999999 9999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHhhC-------CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC
Q 027134 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g 209 (227)
+....++|. +.. +++||++ .|.++. +.+.|..+.... + ...+.+||||++|+|++..+.
T Consensus 96 ---s~~sh~aw~-~~~~~~~~~~~l~fpll--sD~~~~-vak~YGv~~~~~------g-~~~R~tFiID~~G~Ir~~~v~ 161 (216)
T 3sbc_A 96 ---SEYSLLAWT-NIPRKEGGLGPINIPLL--ADTNHS-LSRDYGVLIEEE------G-VALRGLFIIDPKGVIRHITIN 161 (216)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCSCSSCEE--ECTTSH-HHHHHTCEETTT------T-EECEEEEEECTTSBEEEEEEE
T ss_pred ---chhhHHHHH-HHHHHhCCccCcccceE--eCCCCH-HHHHcCCeeccC------C-ceeeEEEEECCCCeEEEEEEc
Confidence 788888887 332 4789998 565554 677776553221 1 235789999999999987543
Q ss_pred CC----ChhhHHHHHHHH
Q 027134 210 TT----SPLSIEKDIKKL 223 (227)
Q Consensus 210 ~~----~~~~l~~~i~~l 223 (227)
.. +.+++.+.|+.|
T Consensus 162 ~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 162 DLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp CTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 22 345666666654
No 97
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.85 E-value=2.1e-26 Score=170.00 Aligned_cols=121 Identities=12% Similarity=0.199 Sum_probs=101.1
Q ss_pred CccCCeEEecCCCCeeecCC-CCCC-EEEEEEecCCCCcchHhHHHHHHHHHHHhc--CCcEEEEEeCCCCCCCCCCCHH
Q 027134 67 TSVHDFSVKDAKGQDVDLSI-YKGK-LLLIVNVASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNE 142 (227)
Q Consensus 67 ~~~p~f~l~~~~G~~v~l~~-~~gk-~vlv~F~aswC~~C~~~~~~l~~l~~~~~~--~~~~vl~Vs~D~~~~~~~~~~~ 142 (227)
+.+|+|++.+.+|+.+++++ ++|| ++||+||++||++|+.++|.|+++++++++ .++.+++|++|. +.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~-------~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDR-------SED 74 (143)
Confidence 35799999999999999999 9999 999999999999999999999999999953 469999999985 667
Q ss_pred HHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecC
Q 027134 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA 208 (227)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~ 208 (227)
.+++|+ ++++++|+.+.............| ++.++|+++|+|++|+|+++..
T Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 75 DMFQYM-MESHGDWLAIPYRSGPASNVTAKY-------------GITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 888998 677888876643332222334444 7888999999999999998853
No 98
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.91 E-value=1.4e-25 Score=170.57 Aligned_cols=121 Identities=15% Similarity=0.254 Sum_probs=99.0
Q ss_pred cCCCccCCe-EEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDF-SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f-~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
.+|+.+|+| ++.+.+| .+++++++||++||+||++||++|+.++|.|++++++|++ ++++|++|++|. +.
T Consensus 23 ~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~-------~~ 94 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE-------EE 94 (165)
T ss_dssp HHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------SH
T ss_pred hhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC-------CH
Confidence 789999999 9999999 9999999999999999999999999999999999999987 679999999995 78
Q ss_pred HHHHHHHHhhCC-CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCC-CcEEEecC
Q 027134 142 EQIQEFACTRFK-AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-GNVVERYA 208 (227)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-G~I~~~~~ 208 (227)
+.+++|+ ++++ ..+++. .+.. ...+.+.+ ++.++|++||||++ |+|+.+..
T Consensus 95 ~~~~~~~-~~~~~~~~~~~--~~~~---~~~l~~~~----------~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 95 DDFNAYY-AKMPWLSIPFA--NRNI---VEALTKKY----------SVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp HHHHHHH-TTCSSEECCTT--CHHH---HHHHHHHT----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HhCCCcccccC--chhH---HHHHHHHc----------CCCCCCEEEEEeCCCCEEEeccc
Confidence 8999998 4443 223332 1100 12222222 78889999999998 99998865
No 99
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.91 E-value=9.5e-25 Score=162.16 Aligned_cols=121 Identities=19% Similarity=0.341 Sum_probs=98.4
Q ss_pred cCCCccCC-eEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHD-FSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~-f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..|+.+|+ |++.|.+| .+++++++||++||+||++||++|+.++|.|++++++|++ +++.|++|++|. +.
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~-------~~ 74 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE-------EE 74 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------SH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC-------CH
Confidence 56788999 99999999 9999999999999999999999999999999999999984 679999999985 78
Q ss_pred HHHHHHHHhhCC-CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEEC-CCCcEEEecC
Q 027134 142 EQIQEFACTRFK-AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVD-KEGNVVERYA 208 (227)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid-~~G~I~~~~~ 208 (227)
+.+++|+ ++++ ..+++.. .|. ...+.+.+ ++.++|+++|+| ++|+|+.+..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~d~----~~~~~~~~----------~v~~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 75 DGFAGYF-AKMPWLAVPFAQ-SEA----VQKLSKHF----------NVESIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp HHHHHHH-TTCSSEECCGGG-HHH----HHHHHHHT----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HHCCceeeccch-hhH----HHHHHHHh----------CCCCCCEEEEEECCCCeEEEecc
Confidence 8999998 4544 2444431 011 11222222 788899999999 9999998864
No 100
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.90 E-value=1.7e-24 Score=160.12 Aligned_cols=121 Identities=14% Similarity=0.260 Sum_probs=97.6
Q ss_pred cCCCccCCe-EEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHh-cCCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDF-SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYK-NQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f-~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~-~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..|+.+|+| ++.|.+| .+++++++||++||+||++||++|+.++|.|++++++++ ++++.|++|++|. +.
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~-------~~ 74 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE-------NE 74 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CH
Confidence 568899997 9999999 999999999999999999999999999999999999998 3579999999985 67
Q ss_pred HHHHHHHHhhCC-CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEEC-CCCcEEEecC
Q 027134 142 EQIQEFACTRFK-AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVD-KEGNVVERYA 208 (227)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid-~~G~I~~~~~ 208 (227)
+.+++++ ++++ ..+++.. .+ ....+.+.+ ++.++|+++|+| ++|+|+.+..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~~----~~~~~~~~~----------~v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 75 SDFHDYY-GKMPWLALPFDQ-RS----TVSELGKTF----------GVESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHH-TTCSSEECCTTC-HH----HHHHHHHHH----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HhCCceEeeccc-hh----HHHHHHHHc----------CCCCCCEEEEEECCCCeEEecch
Confidence 8899998 4543 2333320 01 012222222 788899999999 8999998864
No 101
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.90 E-value=1.4e-23 Score=165.36 Aligned_cols=143 Identities=16% Similarity=0.226 Sum_probs=113.4
Q ss_pred ccCCCccCCeE----EecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCC
Q 027134 63 SQSKTSVHDFS----VKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (227)
Q Consensus 63 ~~~g~~~p~f~----l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~ 137 (227)
+.+|+++|+|+ +.|.+|++++|+||+||++||+|| +.|||.|..|+..+++.+++|+++|++|++||.|
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D------ 99 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID------ 99 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS------
T ss_pred cccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC------
Confidence 48999999999 457788999999999999999999 8999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhh------CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC
Q 027134 138 PGDNEQIQEFACTR------FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (227)
Q Consensus 138 ~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~ 211 (227)
+....++|..+. .+++||++ .|.++. +.+.|+.+....+ ...-.+||||++|+|++......
T Consensus 100 --s~~sh~~w~~~~~~~~~~~~l~fpll--sD~~~~-va~~yGv~~~~~g-------~~~R~tFiIDp~g~Ir~~~~~~~ 167 (219)
T 3tue_A 100 --SEYAHLQWTLQDRKKGGLGTMAIPIL--ADKTKN-IARSYGVLEESQG-------VAYRGLFIIDPHGMLRQITVNDM 167 (219)
T ss_dssp --CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTSH-HHHHTTCEETTTT-------EECEEEEEECTTSBEEEEEEECT
T ss_pred --chhhHHHHhhhhHHhcCccccccccc--cCcccH-HHHHcCCcccCCC-------eeEEEEEEECCCCeEEEEEEecC
Confidence 788888887321 25789998 565554 6777766543221 12347899999999998753221
Q ss_pred ----ChhhHHHHHHHH
Q 027134 212 ----SPLSIEKDIKKL 223 (227)
Q Consensus 212 ----~~~~l~~~i~~l 223 (227)
+.+++.+.|+.|
T Consensus 168 ~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 168 PVGRSVEEVLRLLEAF 183 (219)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh
Confidence 345666666655
No 102
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.89 E-value=7.2e-23 Score=171.25 Aligned_cols=133 Identities=16% Similarity=0.254 Sum_probs=105.8
Q ss_pred ccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHH
Q 027134 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQE 146 (227)
Q Consensus 68 ~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~ 146 (227)
.+|+|+|+|.+|++++|+||+||+|||+|| +.|||.|..|++.+++ ...++++|++||.| +.+..++
T Consensus 3 k~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~~ 70 (322)
T 4eo3_A 3 RVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALKR 70 (322)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHHH
T ss_pred CCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHHH
Confidence 589999999999999999999999999999 7799999999988864 23357999999988 7889999
Q ss_pred HHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCCh---hhHHHHHHHH
Q 027134 147 FACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP---LSIEKDIKKL 223 (227)
Q Consensus 147 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~---~~l~~~i~~l 223 (227)
|+ ++++++||++ .|.++. +...|+.+. .-..+|++||||++|+|++.+.+.... +++.+.++++
T Consensus 71 f~-~~~~l~fp~l--~D~~~~-v~~~ygv~~---------~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 71 FK-EKNDLKVTLL--SDPEGI-LHEFFNVLE---------NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp HH-HHHTCCSEEE--ECTTCH-HHHHTTCEE---------TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred HH-HhhCCceEEE--EcCchH-HHHhcCCCC---------CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 98 7889999999 565544 566663321 113478999999999999887765443 4566666666
Q ss_pred hh
Q 027134 224 LE 225 (227)
Q Consensus 224 L~ 225 (227)
..
T Consensus 138 ~~ 139 (322)
T 4eo3_A 138 IE 139 (322)
T ss_dssp HH
T ss_pred ch
Confidence 53
No 103
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.84 E-value=9e-21 Score=144.62 Aligned_cols=132 Identities=11% Similarity=0.080 Sum_probs=103.5
Q ss_pred cCCCccCCeEEecCCC----------CeeecCCC-CCCEEE-EEEecCCCCcchH-hHHHHHHHHHHHhcCCc-EEEEEe
Q 027134 64 QSKTSVHDFSVKDAKG----------QDVDLSIY-KGKLLL-IVNVASQCGLTNS-NYTELSQLYDKYKNQGL-EILAFP 129 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G----------~~v~l~~~-~gk~vl-v~F~aswC~~C~~-~~~~l~~l~~~~~~~~~-~vl~Vs 129 (227)
++|+.+|++++....+ +.++|+++ +||++| ++||+.|||.|.. +++.+++.+++|+++|+ +|++||
T Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS 90 (176)
T 4f82_A 11 QVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVS 90 (176)
T ss_dssp CTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 8899999988876533 68999997 999655 4666999999999 99999999999999999 999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhCCCC--ccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEec
Q 027134 130 CNQFGAQEPGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY 207 (227)
Q Consensus 130 ~D~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~ 207 (227)
.| +....++|. ++.+++ ||++ .|.++. +.+.|+...... ..|-+++..+.+||| ++|+|++.+
T Consensus 91 ~D--------~~~~~~~f~-~~~~l~~~f~lL--sD~~~~-va~ayGv~~~~~--~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 91 VN--------DAFVMGAWG-RDLHTAGKVRMM--ADGSAA-FTHALGLTQDLS--ARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp SS--------CHHHHHHHH-HHTTCTTTSEEE--ECTTCH-HHHHHTCEEECG--GGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred CC--------CHHHHHHHH-HHhCCCCCceEE--EcCchH-HHHHhCCCcccc--ccCCCcccccEEEEE-cCCEEEEEE
Confidence 98 788999998 677888 9999 555443 566665432110 011123446899999 999999998
Q ss_pred CCC
Q 027134 208 APT 210 (227)
Q Consensus 208 ~g~ 210 (227)
.+.
T Consensus 156 ~~~ 158 (176)
T 4f82_A 156 VEA 158 (176)
T ss_dssp ECC
T ss_pred EcC
Confidence 764
No 104
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.81 E-value=2e-19 Score=136.81 Aligned_cols=132 Identities=15% Similarity=0.243 Sum_probs=103.5
Q ss_pred cCCCccCCeEEecCCC-CeeecCC-CCCCEEEEEEe-cCCCCcchHhHHHHHHHHHHHhcCCcE-EEEEeCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKG-QDVDLSI-YKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLE-ILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G-~~v~l~~-~~gk~vlv~F~-aswC~~C~~~~~~l~~l~~~~~~~~~~-vl~Vs~D~~~~~~~~ 139 (227)
++|+.+|+|++.+.++ +.+++++ ++||++||+|| ..|||.|..+++.+++.+++++++|++ |++||.|
T Consensus 15 ~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D-------- 86 (171)
T 2xhf_A 15 KVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN-------- 86 (171)
T ss_dssp CTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS--------
T ss_pred cCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC--------
Confidence 8999999999995432 8999999 59999999998 789999999999999999999999996 9999998
Q ss_pred CHHHHHHHHHhhCCC--CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 140 DNEQIQEFACTRFKA--EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
+....++|. ++.++ +|+++ .|.++. +.+.|+.+..... .|.+......+|||| +|+|++.++..
T Consensus 87 ~~~~~~~w~-~~~~~~~~f~lL--SD~~~~-~a~ayGv~~~~~~--~g~g~~~~R~tfvId-dG~V~~~~v~~ 152 (171)
T 2xhf_A 87 DPFVMAAWG-KTVDPEHKIRML--ADMHGE-FTRALGTELDSSK--MLGNNRSRRYAMLID-DNKIRSVSTEP 152 (171)
T ss_dssp CHHHHHHHH-HHHCTTCCSEEE--ECTTSH-HHHHHTCBCCCHH--HHSSCCBCCEEEEEE-TTEEEEEEETT
T ss_pred CHHHHHHHH-HhcCCCCCeEEE--EeCCch-HHHHhCCceeccc--cCCCcceEEEEEEEe-CCEEEEEEEeC
Confidence 888999998 56677 89999 554443 5666655422100 000112344789999 99999998754
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.80 E-value=1.6e-19 Score=138.86 Aligned_cols=131 Identities=12% Similarity=0.160 Sum_probs=101.8
Q ss_pred cCCCccCCeEEec--C---------CC----CeeecCC-CCCCEEEEEEe-cCCCCcch-HhHHHHHHHHHHH-hcCCcE
Q 027134 64 QSKTSVHDFSVKD--A---------KG----QDVDLSI-YKGKLLLIVNV-ASQCGLTN-SNYTELSQLYDKY-KNQGLE 124 (227)
Q Consensus 64 ~~g~~~p~f~l~~--~---------~G----~~v~l~~-~~gk~vlv~F~-aswC~~C~-~~~~~l~~l~~~~-~~~~~~ 124 (227)
++|+.+|+|++.+ . +| +.+++++ ++||++||+|| ..|||.|. .+++.+++.++++ +++|+.
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 67 7999999 69999999888 88999999 9999999999999 999995
Q ss_pred -EEEEeCCCCCCCCCCCHHHHHHHHHhhCCC-CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCc
Q 027134 125 -ILAFPCNQFGAQEPGDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGN 202 (227)
Q Consensus 125 -vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~ 202 (227)
|++||.| +....++|. +++++ +|+++ .|.++. +.+.|+.+.... ..|-+......+|||| +|+
T Consensus 82 ~V~gvS~D--------~~~~~~~~~-~~~~~~~f~lL--sD~~~~-~a~~yGv~~~~~--~~G~g~~~~R~tfvId-dG~ 146 (182)
T 1xiy_A 82 DIYCITNN--------DIYVLKSWF-KSMDIKKIKYI--SDGNSS-FTDSMNMLVDKS--NFFMGMRPWRFVAIVE-NNI 146 (182)
T ss_dssp EEEEEESS--------CHHHHHHHH-HHTTCCSSEEE--ECTTSH-HHHHTTCEEECG--GGTCCEEECCEEEEEE-TTE
T ss_pred EEEEEeCC--------CHHHHHHHH-HHcCCCCceEE--EeCchH-HHHHhCCceecc--ccCCCCceEEEEEEEc-CCE
Confidence 9999998 788899998 67788 69999 554443 566665432110 0111223456789999 999
Q ss_pred EEEecCC
Q 027134 203 VVERYAP 209 (227)
Q Consensus 203 I~~~~~g 209 (227)
|++.+..
T Consensus 147 V~~~~v~ 153 (182)
T 1xiy_A 147 LVKMFQE 153 (182)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9998754
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.78 E-value=4.7e-19 Score=128.03 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=89.8
Q ss_pred ccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEe--CCCCCCCCCCCHHHHH
Q 027134 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP--CNQFGAQEPGDNEQIQ 145 (227)
Q Consensus 68 ~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs--~D~~~~~~~~~~~~~~ 145 (227)
.+++++..+.+|........+||+++|+||++||++|+.+.|.+++++++++ .++.++.|+ +|. ..
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~--------~~--- 72 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEK--------NI--- 72 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSH--------HH---
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCc--------hH---
Confidence 3556666677766655666789999999999999999999999999999997 459999999 541 11
Q ss_pred HHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 146 EFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 146 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
+.. ..| ++.++|+++++|++|+++.++.|..+.+++.+.|++++.
T Consensus 73 ~~~----------------------~~~-------------~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 73 DLA----------------------YKY-------------DANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp HHH----------------------HHT-------------TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HHH----------------------HHc-------------CCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 111 112 667789999999999999999998889999999998875
Q ss_pred h
Q 027134 226 T 226 (227)
Q Consensus 226 ~ 226 (227)
.
T Consensus 118 ~ 118 (126)
T 2l57_A 118 K 118 (126)
T ss_dssp C
T ss_pred c
Confidence 3
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.76 E-value=1.9e-19 Score=131.81 Aligned_cols=116 Identities=12% Similarity=0.102 Sum_probs=89.9
Q ss_pred cCCCccCCeE-EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 64 QSKTSVHDFS-VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p~f~-l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
..+..+|+|. +.+.++....+++.+||++||+||++||++|+.+.+.+ .++.++++ ++.++.|++|.
T Consensus 5 ~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~------- 75 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA------- 75 (134)
T ss_dssp -----CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT-------
T ss_pred cccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC-------
Confidence 5678889997 66777777788888899999999999999999999998 89999886 39999999873
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEE--EecCCCCChhhHH
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV--ERYAPTTSPLSIE 217 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~--~~~~g~~~~~~l~ 217 (227)
..+...+.. ++ | ++.++|+++++|++|+++ .++.|..+.+++.
T Consensus 76 ~~~~~~~l~-~~---------------------~-------------~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~ 120 (134)
T 2fwh_A 76 NDAQDVALL-KH---------------------L-------------NVLGLPTILFFDGQGQEHPQARVTGFMDAETFS 120 (134)
T ss_dssp CCHHHHHHH-HH---------------------T-------------TCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHH
T ss_pred CcchHHHHH-HH---------------------c-------------CCCCCCEEEEECCCCCEeeeeeeeeccCHHHHH
Confidence 222222222 12 2 667789999999999998 7899999888888
Q ss_pred HHHHHH
Q 027134 218 KDIKKL 223 (227)
Q Consensus 218 ~~i~~l 223 (227)
+.|+++
T Consensus 121 ~~l~~~ 126 (134)
T 2fwh_A 121 AHLRDR 126 (134)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 888765
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.76 E-value=3.1e-18 Score=126.06 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=89.3
Q ss_pred EEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhC
Q 027134 73 SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (227)
Q Consensus 73 ~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~ 152 (227)
.+.+.+|....+++++||++||+||++||++|+...|.+.++.++++++ +.++.|++|. .. +.. ++
T Consensus 35 ~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~- 100 (141)
T 3hxs_A 35 KIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDK-------EP----ELA-RD- 100 (141)
T ss_dssp HTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH-
T ss_pred HhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCC-------CH----HHH-HH-
Confidence 3567789999999999999999999999999999999999999999865 9999999873 21 111 11
Q ss_pred CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
| ++.++|+++++|++|+++ ++.|..+.+.+.+.|+++|++
T Consensus 101 --------------------~-------------~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 101 --------------------F-------------GIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp --------------------T-------------TCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC-
T ss_pred --------------------c-------------CCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHcc
Confidence 2 667789999999999998 788988899999999998864
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.74 E-value=4e-18 Score=127.78 Aligned_cols=123 Identities=12% Similarity=0.087 Sum_probs=90.5
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEe-cCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCC
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~-aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~ 139 (227)
..+...++| +..|+.+++++.+||+++|+|| ++||++|+.+.|.+ .++.+.++. ++.++.|+.|.
T Consensus 25 ~~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~------- 93 (154)
T 2ju5_A 25 PIAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQ------- 93 (154)
T ss_dssp SSCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCS-------
T ss_pred hcccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCcc-------
Confidence 445555666 4467888888889999999999 99999999999999 777666543 49999998874
Q ss_pred CHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC--ChhhHH
Q 027134 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLSIE 217 (227)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~--~~~~l~ 217 (227)
.. +++++.. +.. ......| ++.++|+++++|++|+++.+. |.. +.+.+.
T Consensus 94 ~~-----------~~~~~~~---~~~-~~l~~~~-------------~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~ 144 (154)
T 2ju5_A 94 KN-----------HQPEEQR---QKN-QELKAQY-------------KVTGFPELVFIDAEGKQLARM-GFEPGGGAAYV 144 (154)
T ss_dssp SC-----------CCCHHHH---HHH-HHHHHHT-------------TCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHH
T ss_pred cc-----------CCChhhH---hhH-HHHHHHc-------------CCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHH
Confidence 10 1222211 100 0112222 778899999999999999999 988 788899
Q ss_pred HHHHHHhhh
Q 027134 218 KDIKKLLET 226 (227)
Q Consensus 218 ~~i~~lL~~ 226 (227)
+.|++++++
T Consensus 145 ~~l~~~l~~ 153 (154)
T 2ju5_A 145 SKVKSALKL 153 (154)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 999998864
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.73 E-value=1.3e-17 Score=120.95 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=83.7
Q ss_pred CCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHH
Q 027134 65 SKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI 144 (227)
Q Consensus 65 ~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~ 144 (227)
....+|+++ +.+++.++....+||+++|+||++||++|+.+.|.+++++++++++ +.++.|++|. ..
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-v~~~~vd~d~-------~~--- 86 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR-IYLLKVDLDK-------NE--- 86 (128)
T ss_dssp ------CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-EEEEEEEGGG-------CH---
T ss_pred HhccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH---
Confidence 445566666 6677778888889999999999999999999999999999999864 9999999873 11
Q ss_pred HHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 145 QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
+.. ..| ++.++|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 87 -~l~----------------------~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 87 -SLA----------------------RKF-------------SVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp -HHH----------------------HHT-------------TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred -HHH----------------------HHc-------------CCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 111 112 66778999999 799999999998888888777653
No 111
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.71 E-value=1.1e-18 Score=133.02 Aligned_cols=124 Identities=10% Similarity=0.029 Sum_probs=77.6
Q ss_pred eeecCCCCCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHH-hhCCCCc
Q 027134 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFAC-TRFKAEF 156 (227)
Q Consensus 81 ~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~-~~~~~~~ 156 (227)
.+.++..+||+|||+|||+||++|+.+.+.+ .++.+.+++ ++.++.|++|. .. .+.+... ...+...
T Consensus 39 ~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~-------~~-~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 39 GMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN-------KT-PLTEPVKIMENGTER 109 (172)
T ss_dssp HHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC-------CC-EEEEEEEEEETTEEE
T ss_pred HHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc-------cc-ccchhhhhhhcchhh
Confidence 3445556799999999999999999864443 556666655 49999999884 11 0000000 0000000
Q ss_pred cceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCC-hhhHHHHHHHHhhh
Q 027134 157 PIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS-PLSIEKDIKKLLET 226 (227)
Q Consensus 157 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~-~~~l~~~i~~lL~~ 226 (227)
......+..+......| ++.++|+++++|++|+++.++.|..+ .+++.+.|+++|++
T Consensus 110 ~~~~~~~~~~~~~~~~~-------------~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~ 167 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKF-------------GANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp EEEEHHHHHHHHHHHHH-------------SCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHc-------------CCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHH
Confidence 00000000000001223 78889999999999999999999988 88899888888753
No 112
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.70 E-value=7.7e-17 Score=119.66 Aligned_cols=115 Identities=14% Similarity=0.192 Sum_probs=95.5
Q ss_pred cCCCccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~ 143 (227)
..|.+++++.+.+.+++.+.....++|+++|+||++||++|+...|.++++.++++++ +.++.|+.|. .. .
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~-------~~-~ 100 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEA-------EP-A 100 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-H
T ss_pred hcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcC-------CH-H
Confidence 5677888899999988887765568899999999999999999999999999999765 9999999873 21 1
Q ss_pred HHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHH
Q 027134 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
.. ++ | ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++
T Consensus 101 ---l~-~~---------------------~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 101 ---LS-TR---------------------F-------------RIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp ---HH-HH---------------------T-------------TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred ---HH-HH---------------------C-------------CCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHH
Confidence 11 11 2 66678998888 6999999999999999999999998
Q ss_pred hhh
Q 027134 224 LET 226 (227)
Q Consensus 224 L~~ 226 (227)
++.
T Consensus 142 l~~ 144 (148)
T 3p2a_A 142 LSR 144 (148)
T ss_dssp HHS
T ss_pred hcc
Confidence 864
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.65 E-value=4.4e-16 Score=113.34 Aligned_cols=94 Identities=16% Similarity=0.084 Sum_probs=73.6
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHH--HHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELS--QLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~--~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
..||++||+||++||++|+.+.|.|. ++.++++++ +.++.|+++. .+.. .+.. +++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~-~~~~~vd~~~-----~~~~---~~l~-~~~------------ 84 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH-FEVVKIDVGN-----FDRN---LELS-QAY------------ 84 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH-CEEEEEECTT-----TTSS---HHHH-HHT------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC-EEEEEEeCCc-----ccch---HHHH-HHh------------
Confidence 46999999999999999999999999 999998764 9999999841 0011 1122 222
Q ss_pred CCCCchhhHHHhhhcCCCCCCCcc---ccceeEEEECCCCcEEEecCC-------CCChhhHHHHHHHHh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSI---KWNFSKFLVDKEGNVVERYAP-------TTSPLSIEKDIKKLL 224 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i---~~~P~~~lid~~G~I~~~~~g-------~~~~~~l~~~i~~lL 224 (227)
++ .++|+++++|++|+++.+..| ..+.+++.+.|+++.
T Consensus 85 ----------------------~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 85 ----------------------GDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ----------------------TCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred ----------------------CCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 44 668999999999999999888 556777888887764
No 114
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.65 E-value=3.3e-16 Score=109.91 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=68.5
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
+..+|+|||+|||+||++|+...|.+.++.+++++ +.++.|++|. .. + .+
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~-------~~-~---l~----------------- 66 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDE-------CE-D---IA----------------- 66 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTT-------CH-H---HH-----------------
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEeccc-------CH-H---HH-----------------
Confidence 34689999999999999999999999999998864 8899998873 21 1 11
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
..| +|+++||.+++ ++|+++.++.|. +++++.+.|++
T Consensus 67 -----~~~-------------~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 67 -----QDN-------------QIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp -----HHT-------------TCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred -----HHc-------------CCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 112 67779986666 899999999995 67777777765
No 115
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=2.7e-15 Score=108.53 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=75.8
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|++||+||++||++|+...|.+.++.++++++ +.++.|++|. .. . ..
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~~-~---l~------------------- 82 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADK-------HQ-S---LG------------------- 82 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTT-------CH-H---HH-------------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCC-------CH-H---HH-------------------
Confidence 4789999999999999999999999999999875 9999999873 11 1 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|++++++++|+++.++.|..+.+.+.+.|.+.+++
T Consensus 83 ---~~~-------------~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 83 ---GQY-------------GVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRS 125 (130)
T ss_dssp ---HHH-------------TCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHH
T ss_pred ---HHc-------------CCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHhc
Confidence 112 6677899999999998778889988888899999887754
No 116
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.64 E-value=5.8e-16 Score=110.32 Aligned_cols=89 Identities=20% Similarity=0.263 Sum_probs=73.0
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
+.+||++||+||++||++|+...|.+.++.+++++ +.++.|++|. .. +.. +
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------~~----~l~-~--------------- 78 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVA-S--------------- 78 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------TH----HHH-H---------------
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-H---------------
Confidence 34789999999999999999999999999999866 9999999873 11 111 1
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
.| ++.++|+++++ ++|+++.++.|. +.+.+++.|+++|
T Consensus 79 ------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 79 ------EC-------------EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp ------HT-------------TCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred ------Hc-------------CCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 12 66778998888 899999999998 8888999998875
No 117
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.64 E-value=1.1e-15 Score=111.84 Aligned_cols=91 Identities=21% Similarity=0.241 Sum_probs=75.4
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|++||+||++||++|+...|.+.++.++++++ +.++.|++|. .. +.. +
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~----------------- 86 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------EQ----ELA-G----------------- 86 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-H-----------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------CH----HHH-H-----------------
Confidence 4789999999999999999999999999999865 9999999873 21 111 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.| ++.++|+++++|++|+++ ++.|..+.+.+.+.|++++..
T Consensus 87 ----~~-------------~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 87 ----AF-------------GIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp ----HT-------------TCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred ----Hc-------------CCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 12 667789999999999998 678888899999999988753
No 118
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.64 E-value=3.1e-16 Score=110.86 Aligned_cols=90 Identities=19% Similarity=0.243 Sum_probs=75.8
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||+++|+||++||++|+...|.+++++++++++ +.++.|++|. ..
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~-v~~~~vd~~~-------~~-------------------------- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK-LKIVKIDVDE-------NQ-------------------------- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT-CEEEEEETTT-------CC--------------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CH--------------------------
Confidence 7899999999999999999999999999999864 9999999873 10
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.....| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 62 ~l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 62 ETAGKY-------------GVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp SHHHHT-------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTSC
T ss_pred HHHHHc-------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 012222 67779999999 999999999999999899999887764
No 119
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.64 E-value=1.5e-15 Score=106.91 Aligned_cols=92 Identities=20% Similarity=0.253 Sum_probs=72.4
Q ss_pred CCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 85 SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 85 ~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
.+.+||+++|+||++||++|+...|.++++++++++ +.++.|++|+ ....
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~-------~~~~--------------------- 69 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENKT--------------------- 69 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTHH---------------------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCc-------chHH---------------------
Confidence 344689999999999999999999999999999874 9999998862 1111
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
....| ++.++|+ ++++++|+++.++.|.. .+++.+.|+++++
T Consensus 70 ----~~~~~-------------~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 70 ----LAKEL-------------GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAARS 111 (111)
T ss_dssp ----HHHHH-------------CCSBSSE-EEEESSSSEEEEEESSC-HHHHHHHHHHHHC
T ss_pred ----HHHHc-------------CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 11122 6777898 77779999999998874 7788888887763
No 120
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.63 E-value=4.4e-16 Score=108.86 Aligned_cols=90 Identities=18% Similarity=0.286 Sum_probs=75.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+|++++|+||++||++|+...|.+.++.++++++ +.++.|+.|. .. . .. ++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~---~~-~~---------------- 70 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDE-------NQ-K---IA-DK---------------- 70 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH-H---HH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEcccc-------CH-H---HH-Hh----------------
Confidence 5899999999999999999999999999999875 9999999873 21 1 11 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 71 -----~-------------~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 71 -----Y-------------SVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp -----T-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred -----c-------------CcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 1 66678999999 999999999999899999999998874
No 121
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.63 E-value=1.1e-16 Score=121.62 Aligned_cols=82 Identities=15% Similarity=0.063 Sum_probs=62.8
Q ss_pred ecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeee
Q 027134 83 DLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKV 162 (227)
Q Consensus 83 ~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (227)
.+++++||+++|+|||+|||+|+.++|.|++++++++ ++.++.|++|. ..+.+ .++..
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~-----------~~~~~-~~~~~-------- 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGR-----------AEDDL-RQRLA-------- 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHH-----------HHHHT-TTTTT--------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCC-----------CHHHH-HHHHH--------
Confidence 3566789999999999999999999999999999875 49999998652 11111 11110
Q ss_pred ccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC
Q 027134 163 DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g 209 (227)
.++.++|+++++|++|+++.++.+
T Consensus 106 -----------------------~~v~~iPt~i~~~~~G~~~~~~g~ 129 (167)
T 1z6n_A 106 -----------------------LERIAIPLVLVLDEEFNLLGRFVE 129 (167)
T ss_dssp -----------------------CSSCCSSEEEEECTTCCEEEEEES
T ss_pred -----------------------cCCCCcCeEEEECCCCCEEEEEcC
Confidence 046779999999999999888743
No 122
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.63 E-value=2.2e-15 Score=105.16 Aligned_cols=90 Identities=18% Similarity=0.253 Sum_probs=74.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.||+++|.||++||++|+...|.++++.++++++ +.++.|+.|. .. . .
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~-~---~-------------------- 65 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDE-------SP-N---V-------------------- 65 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-H---H--------------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCC-------CH-H---H--------------------
Confidence 5889999999999999999999999999999865 9999999873 21 1 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
...| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 66 --~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 66 --ASEY-------------GIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp --HHHH-------------TCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred --HHHC-------------CCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 1122 66678997776 799999999999988899999998874
No 123
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.63 E-value=3.4e-16 Score=116.66 Aligned_cols=90 Identities=11% Similarity=0.080 Sum_probs=73.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|+|||+|||+||++|+.+.|.+.+++++|+++ +.++.|++|. .. + ..
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------~~-~---l~------------------- 70 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------TA-V---YT------------------- 70 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------CC-H---HH-------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------CH-H---HH-------------------
Confidence 5899999999999999999999999999999776 9999999873 11 1 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEE---------EecCC-CCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV---------ERYAP-TTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~---------~~~~g-~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|+++ ++++|+++ .++.| ..+.+++.+.|+++++
T Consensus 71 ---~~~-------------~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 71 ---QYF-------------DISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp ---HHT-------------TCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred ---HHc-------------CCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 112 667789988 66899999 88888 7788889999988864
No 124
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.63 E-value=1.4e-15 Score=106.39 Aligned_cols=90 Identities=21% Similarity=0.266 Sum_probs=75.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|+++|.||++||++|+...|.++++.++++++ +.++.|++|. ..+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~------------------------- 65 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG------------------------- 65 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CTT-------------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CHH-------------------------
Confidence 5889999999999999999999999999999865 9999999873 110
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
....| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++|+
T Consensus 66 -~~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 66 -TAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp -HHHHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -HHHHc-------------CCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 11122 67778999999 899999999999888899999988773
No 125
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.62 E-value=1.4e-15 Score=107.10 Aligned_cols=88 Identities=15% Similarity=0.246 Sum_probs=71.3
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
-+||+++|+||++||++|+...|.++++.+++++ +.++.|++|. .. . .. ++
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~-------~~-~---l~-~~--------------- 72 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDE-------LG-D---VA-QK--------------- 72 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH-H---HH-HH---------------
T ss_pred hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH-H---HH-HH---------------
Confidence 3589999999999999999999999999999865 9999998873 21 1 11 11
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|++++++ +|+++.++.|. .++.+++.|++++
T Consensus 73 ------~-------------~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 73 ------N-------------EVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ------T-------------TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ------c-------------CCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 2 667789999997 99999999998 5678888888764
No 126
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=7e-16 Score=111.67 Aligned_cols=101 Identities=18% Similarity=0.269 Sum_probs=77.4
Q ss_pred eeecCCCCCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCcc
Q 027134 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (227)
Q Consensus 81 ~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (227)
.+.+++.+||++||+||++||++|+.+.|.+ .++.+.++.+ +.++.|+.|. +.. .+..
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~------~~~---~~~~--------- 79 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH-FVNLKMDMEK------GEG---VELR--------- 79 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH-SEEEEECSSS------TTH---HHHH---------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC-eEEEEEecCC------cch---HHHH---------
Confidence 4555556799999999999999999999998 6666666543 8888887652 011 1111
Q ss_pred ceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 158 IFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 158 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|+++++|++|+++.++.|..+.+++.+.|++++..
T Consensus 80 -------------~~~-------------~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 80 -------------KKY-------------GVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp -------------HHT-------------TCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred -------------HHc-------------CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 112 6677899999999999999999998888999999988753
No 127
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.62 E-value=1.1e-15 Score=106.28 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=74.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
++++++|+||++||++|+...|.++++.++++++ +.++.|++|. ..+ .. ++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~---------------- 68 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE-------NPS----TA-AK---------------- 68 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-HH----------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc-------CHH----HH-Hh----------------
Confidence 7899999999999999999999999999999876 9999999873 221 11 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|+.++++ +|+++.++.|..+.+++.+.|+++|
T Consensus 69 -----~-------------~v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 69 -----Y-------------EVMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp -----T-------------TCCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred -----C-------------CCcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 2 666789988885 9999999999988888998888764
No 128
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.62 E-value=2.2e-16 Score=115.32 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=76.8
Q ss_pred EEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhC
Q 027134 73 SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (227)
Q Consensus 73 ~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~ 152 (227)
++.+.++-.-.+++.+||++||+||++||++|+.+.|.++++.+++ ++.++.|++|. .. . ..
T Consensus 24 ~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------~~-~---l~---- 85 (133)
T 3cxg_A 24 ELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------HP-K---LN---- 85 (133)
T ss_dssp ECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT-------CH-H---HH----
T ss_pred EecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc-------hH-H---HH----
Confidence 3444444344456778999999999999999999999999988776 38888888763 11 1 11
Q ss_pred CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEE-CCCCc--EEEecCCCCChhhHHHHHHHHhhh
Q 027134 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLV-DKEGN--VVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~li-d~~G~--I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|+++++ |++|+ ++.++.|. +.+++.+.|++++.+
T Consensus 86 ------------------~~~-------------~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 86 ------------------DQH-------------NIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp ------------------HHT-------------TCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred ------------------Hhc-------------CCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 112 66778999998 45666 99999998 788899999988753
No 129
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.62 E-value=1.8e-15 Score=106.57 Aligned_cols=90 Identities=17% Similarity=0.266 Sum_probs=74.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.||+++|.||++||++|+...|.+.++.++++++ +.++.|++|. ..+ .. +
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~----------------- 71 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDE-------NPG----TA-A----------------- 71 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-H-----------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCC-------CHH----HH-H-----------------
Confidence 4789999999999999999999999999999765 9999999873 211 11 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.| ++.++|+.+++ ++|+++.++.|..+.+.+.+.|+++|+
T Consensus 72 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 72 ----KY-------------GVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred ----hC-------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 12 66678987666 899999999999988899999998875
No 130
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.62 E-value=2.7e-15 Score=111.26 Aligned_cols=90 Identities=10% Similarity=0.008 Sum_probs=72.9
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++|||+|||+||++|+...|.|.++.++++++ +.|+-|++|+. .+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~----------------~e---------------- 86 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEV----------------PD---------------- 86 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTC----------------CT----------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCC----------------HH----------------
Confidence 4689999999999999999999999999999875 89999998841 01
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEE--E-------ecCCCCC-hhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV--E-------RYAPTTS-PLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~--~-------~~~g~~~-~~~l~~~i~~lL~ 225 (227)
....| +|..+||.+++ ++|+.+ . +..|..+ .+++.+.|++++.
T Consensus 87 -~a~~y-------------~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 87 -FNTMY-------------ELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp -TTTTT-------------TCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred -HHHHc-------------CCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 12223 77889998777 678887 5 7888876 7889999988875
No 131
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.62 E-value=1e-15 Score=106.54 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=73.8
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.||+++|.||++||++|+...|.++++.++++++ +.++.|++|. ..+ ..
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~~----~~------------------- 64 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE-------NPE----TT------------------- 64 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT-------CHH----HH-------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC-------CHH----HH-------------------
Confidence 5789999999999999999999999999999875 9999999873 211 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
..| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 65 ---~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 65 ---SQF-------------GIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ---HHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred ---HHc-------------CCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 112 66778999999 89999999999988888888887766
No 132
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.62 E-value=5.2e-17 Score=123.01 Aligned_cols=113 Identities=10% Similarity=0.098 Sum_probs=81.8
Q ss_pred ccCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHH
Q 027134 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEF 147 (227)
Q Consensus 68 ~~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~ 147 (227)
..+++...+.+ +.++....+||++||+||++||++|+.+.|.|.++.+.++. ++.++.|++|. ..
T Consensus 26 ~~~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~-------~~------ 90 (164)
T 1sen_A 26 FGDHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED-------EE------ 90 (164)
T ss_dssp SCTTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG-------GG------
T ss_pred ccccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC-------Cc------
Confidence 34555555555 55666667899999999999999999999999998776654 37788888763 00
Q ss_pred HHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC----------CChhhHH
Q 027134 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT----------TSPLSIE 217 (227)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~----------~~~~~l~ 217 (227)
. . ....|.+ .+..+|+++++|++|+++.+..|. .+.+++.
T Consensus 91 ---~-~---------------~~~~~~~-----------~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~ 140 (164)
T 1sen_A 91 ---E-P---------------KDEDFSP-----------DGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVV 140 (164)
T ss_dssp ---S-C---------------SCGGGCT-----------TCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHH
T ss_pred ---h-H---------------HHHHhcc-----------cCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHH
Confidence 0 0 0011100 235589999999999999988884 5677888
Q ss_pred HHHHHHhh
Q 027134 218 KDIKKLLE 225 (227)
Q Consensus 218 ~~i~~lL~ 225 (227)
+.|+++++
T Consensus 141 ~~l~~~l~ 148 (164)
T 1sen_A 141 QGMKEAQE 148 (164)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888875
No 133
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.61 E-value=4e-15 Score=104.83 Aligned_cols=90 Identities=11% Similarity=0.187 Sum_probs=70.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||+++|+||++||++|+...|.+.++.++++..++.++.|++|. .. +..
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~~~------------------- 69 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS----EIS------------------- 69 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH----HHH-------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH----HHH-------------------
Confidence 589999999999999999999999999999765669999999873 11 111
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|+++++ ++|+++.++.|.. ++++.+.|+++++
T Consensus 70 ---~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 70 ---ELF-------------EISAVPYFIII-HKGTILKELSGAD-PKEYVSLLEDCKN 109 (112)
T ss_dssp ---HHT-------------TCCSSSEEEEE-ETTEEEEEECSCC-HHHHHHHHHHHHH
T ss_pred ---HHc-------------CCCcccEEEEE-ECCEEEEEecCCC-HHHHHHHHHHHHh
Confidence 112 66778998877 7999999999974 4568888888875
No 134
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.61 E-value=3.7e-15 Score=108.10 Aligned_cols=90 Identities=21% Similarity=0.274 Sum_probs=76.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|+++|+||++||++|+...|.++++.++++++ +.++.|++|. ..
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~-------------------------- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP-------------------------- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC--------------------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH--------------------------
Confidence 5899999999999999999999999999999865 9999999873 10
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.....| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 85 ~l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 85 GTAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp TTSGGG-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHc-------------CCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 012223 77789999999 899999999999888899999998874
No 135
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.61 E-value=3.3e-15 Score=106.77 Aligned_cols=90 Identities=17% Similarity=0.259 Sum_probs=74.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.||++||+||++||++|+...|.++++.++++++ +.++.|++|. .. +.. ++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~-------~~----~l~-~~---------------- 80 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDD-------HT----DLA-IE---------------- 80 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTT-------TH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCC-------CH----HHH-HH----------------
Confidence 5889999999999999999999999999998764 9999999873 11 111 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+++++ ++|+++.++.|..+.+.+.+.|++++.
T Consensus 81 -----~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 81 -----Y-------------EVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp -----T-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -----c-------------CCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 2 66678999998 899999999998888899999988763
No 136
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.60 E-value=1.4e-15 Score=106.22 Aligned_cols=89 Identities=18% Similarity=0.266 Sum_probs=70.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|+++|+||++||++|+...|.++++.++++ ++.++.|++|. .. +
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~----~--------------------- 62 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ----E--------------------- 62 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH----H---------------------
Confidence 58999999999999999999999999999985 49999999874 11 0
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
....| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 63 -l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~e 105 (105)
T 4euy_A 63 -IAGRY-------------AVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFEE 105 (105)
T ss_dssp ---------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC-
T ss_pred -HHHhc-------------CCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhhC
Confidence 11122 67778999999 599999999999999999999987763
No 137
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.60 E-value=5.5e-15 Score=104.28 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=81.6
Q ss_pred EecCCCCeeecC-CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhC
Q 027134 74 VKDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (227)
Q Consensus 74 l~~~~G~~v~l~-~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~ 152 (227)
+.+.+++.+... .-.|++++|.||++||++|+...|.++++.++++++ +.++.|++|. .. +.. +
T Consensus 9 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~----~~~-~-- 73 (115)
T 1thx_A 9 VITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NP----TTV-K-- 73 (115)
T ss_dssp EEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CH----HHH-H--
T ss_pred eEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CH----HHH-H--
Confidence 334444444422 126889999999999999999999999999999875 9999999873 21 111 1
Q ss_pred CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.| ++.++|+++++ ++|+++.++.|..+.+.+.+.|++++..
T Consensus 74 -------------------~~-------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 74 -------------------KY-------------KVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp -------------------HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred -------------------Hc-------------CCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 12 66678999999 8999999999998889999999998853
No 138
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=3.7e-15 Score=108.09 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=80.6
Q ss_pred EecCCCCeeecCC-CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc---CCcEEEEEeCCCCCCCCCCCHHHHHHHHH
Q 027134 74 VKDAKGQDVDLSI-YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN---QGLEILAFPCNQFGAQEPGDNEQIQEFAC 149 (227)
Q Consensus 74 l~~~~G~~v~l~~-~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~---~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~ 149 (227)
+...+++.+...- -.++++||+||++||++|+...|.+.++.+++++ .++.++.|++|. .. +
T Consensus 9 v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~--- 74 (133)
T 1x5d_A 9 VIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------NQ----V--- 74 (133)
T ss_dssp CEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------CC----H---
T ss_pred CEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------CH----H---
Confidence 3344444443211 2578999999999999999999999999999983 349999998763 11 0
Q ss_pred hhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 150 TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 150 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
....| ++.++|+++++++ |+++.++.|..+.+.+.+.|+++++.
T Consensus 75 -------------------l~~~~-------------~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 75 -------------------LASRY-------------GIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp -------------------HHHHH-------------TCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred -------------------HHHhC-------------CCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhhc
Confidence 11222 6777999999987 99999999988899999999988753
No 139
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.60 E-value=1.8e-15 Score=111.36 Aligned_cols=91 Identities=10% Similarity=0.111 Sum_probs=75.9
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.++++||+||++||++|+...|.+.++.++++++ +.++.|++|. .. . ..
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~-~---l~------------------- 71 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIAT-------NP-W---TA------------------- 71 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTT-------CH-H---HH-------------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCc-------CH-h---HH-------------------
Confidence 4899999999999999999999999999999875 9999999873 21 1 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++++.
T Consensus 72 ---~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 72 ---EKY-------------GVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp ---HHH-------------TCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred ---HHC-------------CCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 112 66778987777 8999999999998899999999998853
No 140
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.60 E-value=5.8e-15 Score=103.86 Aligned_cols=88 Identities=15% Similarity=0.107 Sum_probs=72.2
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDN 168 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 168 (227)
||+++|.||++||++|+...|.++++.+++++ ++.++.|+.|. .. . ..
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~-~---~~-------------------- 71 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA-------VA-A---VA-------------------- 71 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------TH-H---HH--------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc-------hH-H---HH--------------------
Confidence 89999999999999999999999999999986 49999999873 11 1 11
Q ss_pred chhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 169 AAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|+.+++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 72 --~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 72 --EAA-------------GITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp --HHH-------------TCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred --HHc-------------CCCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 122 66678985555 899999999998 78889999999875
No 141
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=3e-15 Score=109.71 Aligned_cols=105 Identities=12% Similarity=0.180 Sum_probs=80.1
Q ss_pred EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCC--cEEEEEeCCCCCCCCCCCHHHHHHHHHhh
Q 027134 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPGDNEQIQEFACTR 151 (227)
Q Consensus 74 l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~--~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~ 151 (227)
+.+.+++.+...-..+|++||+||++||++|+...|.+.++++++++++ +.++.|++|. . .+..
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~--- 84 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS-------A----SMLA--- 84 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT-------C----HHHH---
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc-------c----HHHH---
Confidence 4555665555433468999999999999999999999999999998763 7777777652 1 1111
Q ss_pred CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 152 FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|+++++ ++|+ +.++.|..+.+.+.+.|++++..
T Consensus 85 -------------------~~~-------------~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 85 -------------------SKF-------------DVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp -------------------HHT-------------TCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHSS
T ss_pred -------------------HHC-------------CCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcCC
Confidence 112 66778999999 7899 66888988899999999998753
No 142
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.60 E-value=5.5e-15 Score=103.71 Aligned_cols=90 Identities=19% Similarity=0.280 Sum_probs=75.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
++++++|.||++||++|+...|.+.++.++++++ +.++.|++|. .. +.. ++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 71 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEE-------EK----TLF-QR---------------- 71 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCc-------Ch----hHH-Hh----------------
Confidence 5789999999999999999999999999999864 9999999873 21 111 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++++
T Consensus 72 -----~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 72 -----F-------------SLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp -----T-------------TCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred -----c-------------CCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 2 66678999999 789999999999889999999999876
No 143
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.59 E-value=4.3e-15 Score=111.36 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=76.1
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.++++||+||++||++|+...|.++++.++++++ +.++.|++|. .. +
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~----~--------------------- 109 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP----A--------------------- 109 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST----H---------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH----H---------------------
Confidence 5889999999999999999999999999999865 9999999873 11 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
....| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++++.
T Consensus 110 -l~~~~-------------~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 110 -VAGRH-------------RIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp -HHHHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred -HHHHc-------------CCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 11122 67778999888 7999999999998899999999998864
No 144
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.59 E-value=5e-15 Score=106.76 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=71.4
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
.+||++||+||++||++|+...|.++++.++++ ++.++.|++|. .. +.. +
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~-------~~----~l~-~---------------- 85 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE-------LK----SVA-S---------------- 85 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------SH----HHH-H----------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc-------CH----HHH-H----------------
Confidence 368999999999999999999999999999986 49999999873 11 111 1
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.| ++.++|+++++ ++|+++.++.|. +++++.+.|+++|+
T Consensus 86 -----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 86 -----DW-------------AIQAMPTFMFL-KEGKILDKVVGA-KKDELQSTIAKHLA 124 (124)
T ss_dssp -----HT-------------TCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHCC
T ss_pred -----Hc-------------CCCccCEEEEE-ECCEEEEEEeCC-CHHHHHHHHHHhcC
Confidence 12 66678996666 899999999984 78889998888763
No 145
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=3.4e-15 Score=122.45 Aligned_cols=91 Identities=13% Similarity=0.203 Sum_probs=74.9
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
..+||+|||+||++||++|+.+.|.+.++.++++++ +.++.|++|. .. +.. ++
T Consensus 23 ~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~-------~~----~~~-~~-------------- 75 (287)
T 3qou_A 23 QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA-------EQ----MIA-AQ-------------- 75 (287)
T ss_dssp TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT-------CH----HHH-HT--------------
T ss_pred hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc-------CH----HHH-HH--------------
Confidence 345899999999999999999999999999999875 9999999873 21 111 11
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| +|.++|+++++ ++|+++.++.|..+.+.+.+.|+..+
T Consensus 76 -------~-------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 76 -------F-------------GLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp -------T-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred -------c-------------CCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 2 67778999999 79999999999888888888887765
No 146
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=4.5e-15 Score=106.94 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=76.7
Q ss_pred EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 74 l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+...+++.+.- -.++ .+||+||++||++|+...|.+.++++++++.++.++.|++|. ..+ .. ++
T Consensus 9 v~~l~~~~f~~-~~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~-------~~~----~~-~~-- 72 (126)
T 1x5e_A 9 VRVITDENWRE-LLEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE-------QPG----LS-GR-- 72 (126)
T ss_dssp EEECCTTTHHH-HTSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT-------CHH----HH-HH--
T ss_pred cEEecHHHHHH-HhCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC-------CHH----HH-HH--
Confidence 33444444431 1234 489999999999999999999999999987669999999873 211 11 11
Q ss_pred CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+++++ ++|++ .++.|..+.+.+.+.|++++.
T Consensus 73 -------------------~-------------~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 73 -------------------F-------------IINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp -------------------T-------------TCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCGG
T ss_pred -------------------c-------------CCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHhh
Confidence 2 66678999999 88995 688898888899999988764
No 147
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.59 E-value=2.2e-15 Score=104.12 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=75.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
++++++|.||++||++|+...|.++++.+++++ +.++.|+.|. .. +.. +
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~~----~~~-~----------------- 63 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------NP----DIA-A----------------- 63 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-H-----------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------CH----HHH-H-----------------
Confidence 588999999999999999999999999999876 9999999873 21 111 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++|++
T Consensus 64 ----~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 104 (104)
T 2e0q_A 64 ----RY-------------GVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp ----HT-------------TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred ----hC-------------CccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhcC
Confidence 12 56668999988 8999999999998888999999998863
No 148
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.59 E-value=9.5e-16 Score=109.73 Aligned_cols=113 Identities=18% Similarity=0.207 Sum_probs=81.1
Q ss_pred cCCCccCCeEEecCCCCeeecCC--CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCH
Q 027134 64 QSKTSVHDFSVKDAKGQDVDLSI--YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (227)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~v~l~~--~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~ 141 (227)
..|...+.+.+.+.++-.-.+.+ -++|+++|+||++||++|+...|.++++.+++++ +.++.|++|. ..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------~~ 77 (122)
T 2vlu_A 7 AAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE-------LK 77 (122)
T ss_dssp -----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH
T ss_pred ccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC-------CH
Confidence 34555666666554432222322 2589999999999999999999999999999875 9999999873 11
Q ss_pred HHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHH
Q 027134 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIK 221 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~ 221 (227)
+.. ++ | ++.++|+.+++ ++|+++.++.|.. .+.+.+.|+
T Consensus 78 ----~~~-~~---------------------~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~ 116 (122)
T 2vlu_A 78 ----PIA-EQ---------------------F-------------SVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVG 116 (122)
T ss_dssp ----HHH-HH---------------------T-------------TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHH
T ss_pred ----HHH-HH---------------------c-------------CCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHH
Confidence 111 11 2 66678986655 8999999999988 888999999
Q ss_pred HHhhh
Q 027134 222 KLLET 226 (227)
Q Consensus 222 ~lL~~ 226 (227)
++++.
T Consensus 117 ~~l~~ 121 (122)
T 2vlu_A 117 LHAAA 121 (122)
T ss_dssp HHHSC
T ss_pred HHhcc
Confidence 98864
No 149
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.59 E-value=4.7e-15 Score=102.95 Aligned_cols=102 Identities=16% Similarity=0.229 Sum_probs=78.1
Q ss_pred ecCCCCeeecCC-CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 75 KDAKGQDVDLSI-YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 75 ~~~~G~~v~l~~-~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
.+.+++.+...- -.+|+++|.||++||++|+...|.++++.++++++ +.++.|+.|. .. +.. ++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~-- 67 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDE-------AP----GIA-TQ-- 67 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH--
T ss_pred eechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcc-------hH----HHH-Hh--
Confidence 345555544322 25789999999999999999999999999999875 9999999873 21 111 11
Q ss_pred CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|+.+++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 68 -------------------~-------------~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 68 -------------------Y-------------NIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp -------------------T-------------TCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred -------------------C-------------CCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 1 56668997666 79999999999988888999988865
No 150
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.59 E-value=7.4e-15 Score=106.62 Aligned_cols=109 Identities=19% Similarity=0.175 Sum_probs=79.6
Q ss_pred CeEEecCCCCeeecCCC-CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcC-CcEEEEEeCCCCCCCCCCCHHHHHHHH
Q 027134 71 DFSVKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCNQFGAQEPGDNEQIQEFA 148 (227)
Q Consensus 71 ~f~l~~~~G~~v~l~~~-~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~-~~~vl~Vs~D~~~~~~~~~~~~~~~~~ 148 (227)
+-.+.+.+++.+..... +++++||+||++||++|+...|.+.+++++++++ ++.++.|+.|.
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~---------------- 69 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA---------------- 69 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT----------------
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc----------------
Confidence 33456666666655443 4899999999999999999999999999999853 48888877652
Q ss_pred HhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEE-ecC-CCCChhhHHHHHHHHhh
Q 027134 149 CTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVE-RYA-PTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 149 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~-~~~-g~~~~~~l~~~i~~lL~ 225 (227)
. +. ....| ++.++|+++++++.|++.. ++. |..+.+.+.+.|++++.
T Consensus 70 --~-----~~----------~~~~~-------------~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 70 --N-----DI----------TNDQY-------------KVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp --S-----CC----------CCSSC-------------CCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred --C-----HH----------HHhhc-------------CCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 0 00 11112 7788999999988776432 455 55778889999998875
No 151
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.58 E-value=9.3e-15 Score=104.29 Aligned_cols=104 Identities=15% Similarity=0.065 Sum_probs=81.2
Q ss_pred EEecCCCCeeecC-CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc----CCcEEEEEeCCCCCCCCCCCHHHHHHH
Q 027134 73 SVKDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNEQIQEF 147 (227)
Q Consensus 73 ~l~~~~G~~v~l~-~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~----~~~~vl~Vs~D~~~~~~~~~~~~~~~~ 147 (227)
.+.+.+++.+... ..++++++|+||++||++|+...|.++++.+++++ .++.++.|+.|.
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~--------------- 72 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA--------------- 72 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT---------------
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc---------------
Confidence 3556667666654 24789999999999999999999999999999986 258898888762
Q ss_pred HHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcE-EEecCCCCChhhHHHHHHHHhh
Q 027134 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV-VERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I-~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
. . + .. ++.++|++++++++|++ +.++.|..+.+.+.+.|++++.
T Consensus 73 ---~-~-----~--~~-----------------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 73 ---N-D-----V--PD-----------------------EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp ---S-C-----C--SS-----------------------CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred ---c-c-----c--cc-----------------------ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 0 0 0 00 34558999999988885 6788898888899999998875
No 152
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.58 E-value=1.1e-15 Score=120.04 Aligned_cols=110 Identities=15% Similarity=0.196 Sum_probs=86.4
Q ss_pred cCCeEEecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHH
Q 027134 69 VHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFA 148 (227)
Q Consensus 69 ~p~f~l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~ 148 (227)
.++..+.+.+++.+.....+|+++||+||++||++|+...|.+.++.++++++ +.++.|++|. .. +.+
T Consensus 94 ~~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~~----~l~ 161 (210)
T 3apq_A 94 DDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------DR----MLC 161 (210)
T ss_dssp TTCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHH
T ss_pred CCCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------cH----HHH
Confidence 34445555666555544457899999999999999999999999999999765 9999999873 21 111
Q ss_pred HhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 149 CTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 149 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
++ | ++.++|+++++ ++|+++.++.|..+.+.+.+.|++++..
T Consensus 162 -~~---------------------~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 162 -RM---------------------K-------------GVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp -HH---------------------T-------------TCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHHC
T ss_pred -HH---------------------c-------------CCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCcc
Confidence 11 1 66778999988 9999999999988899999999988753
No 153
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.58 E-value=7.3e-15 Score=105.44 Aligned_cols=90 Identities=20% Similarity=0.262 Sum_probs=70.8
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
+.+||+++|+||++||++|+...|.++++.+++++ +.++.|+.|. ...+ .
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------~~~~---~------------------ 83 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENKT---L------------------ 83 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTHH---H------------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCc-------chHH---H------------------
Confidence 34789999999999999999999999999999873 8999998762 1111 1
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
...| ++.++|+ ++++++|+++.++.|.. .+++.+.|++++
T Consensus 84 ----~~~~-------------~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 84 ----AKEL-------------GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp ----HHHH-------------CCSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred ----HHHc-------------CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 1122 6777898 56668999999998876 778888888775
No 154
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.58 E-value=7.2e-15 Score=102.34 Aligned_cols=102 Identities=13% Similarity=0.200 Sum_probs=78.3
Q ss_pred ecCCCCeeecC-CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 75 KDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 75 ~~~~G~~v~l~-~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
...+++.+... .-.+++++|.||++||++|+...|.+.++.+++++ ++.++.|++|. .. +.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~------ 66 (107)
T 2i4a_A 5 LAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP----ET------ 66 (107)
T ss_dssp EECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC----HH------
T ss_pred eecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH----HH------
Confidence 34444444321 23688999999999999999999999999999986 49999999873 11 11
Q ss_pred CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
...| ++.++|+++++ ++|+++.++.|..+.+.+.+.|++++
T Consensus 67 ----------------~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 67 ----------------PNAY-------------QVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp ----------------HHHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred ----------------HHhc-------------CCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 1112 66678999999 89999999999888888888887754
No 155
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.58 E-value=1.2e-14 Score=106.00 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=75.3
Q ss_pred CCEEEEEEecCCC--CcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 89 GKLLLIVNVASQC--GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 89 gk~vlv~F~aswC--~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
+++|||+|||+|| ++|+...|.|.++.++|+++ +.|+-|++|. ..++
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe--------~~~l---------------------- 81 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEA--------ERGL---------------------- 81 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGG--------HHHH----------------------
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCC--------CHHH----------------------
Confidence 3499999999999 99999999999999999876 9999999873 2111
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
...| +|+.+||.+++ ++|+++.+..|..+.+++.+.|+++|+
T Consensus 82 ---a~~y-------------gV~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 82 ---MARF-------------GVAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp ---HHHH-------------TCCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred ---HHHc-------------CCccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 2223 78889998888 899999999999999999999998874
No 156
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.57 E-value=7.2e-15 Score=107.64 Aligned_cols=95 Identities=20% Similarity=0.353 Sum_probs=75.8
Q ss_pred eeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCcccee
Q 027134 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFD 160 (227)
Q Consensus 81 ~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (227)
.+..++.+||+++|+||++||++|+...|.++++.++++ ++.++.|++|. .. +..
T Consensus 38 ~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~~----~~~------------ 92 (139)
T 3d22_A 38 KLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------LS----DFS------------ 92 (139)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH------------
T ss_pred HHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------cH----HHH------------
Confidence 344444569999999999999999999999999999985 49999999873 11 111
Q ss_pred eeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 161 KVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 161 ~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 93 ----------~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 93 ----------ASW-------------EIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp ----------HHT-------------TCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred ----------HHc-------------CCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 112 66778998777 899999999998 77889999988875
No 157
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.57 E-value=9.1e-15 Score=101.55 Aligned_cols=88 Identities=20% Similarity=0.249 Sum_probs=72.5
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
.++|+++|.||++||++|+...|.+.++.+++++ +.++.|+.|. .. . .. +
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~-------~~-~---~~-~---------------- 67 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ-D---VA-S---------------- 67 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTT-------CH-H---HH-H----------------
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhh-------hH-H---HH-H----------------
Confidence 4689999999999999999999999999999865 9999999873 21 1 11 1
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
.| ++.++|+.+++ ++|+++.++.|. +.+.+.+.|+++|
T Consensus 68 -----~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 68 -----ES-------------EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp -----HT-------------TCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred -----Hc-------------CCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 11 66778999999 789999999998 8888999888875
No 158
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.57 E-value=5.9e-15 Score=105.76 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=73.9
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
++|+++|.||++||++|+...|.++++.++++++++.++.|++|. .. . ..
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~~-~---~~------------------- 81 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------QS-Q---IA------------------- 81 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------CH-H---HH-------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------CH-H---HH-------------------
Confidence 588999999999999999999999999999987679999999873 21 1 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++..+|+++++ ++|+++.++.|. +.+++.+.|+++|+
T Consensus 82 ---~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 82 ---QEV-------------GIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp ---HHH-------------TCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred ---HHc-------------CCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 122 56678998877 699999999998 88889999988763
No 159
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.57 E-value=1.1e-14 Score=101.52 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=74.6
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++|.||++||++|+...|.++++.++++++ +.++.|++|. ..+ .. +
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~----------------- 66 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDE-------NPK----TA-M----------------- 66 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CHH----HH-H-----------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCC-------CHh----HH-H-----------------
Confidence 4789999999999999999999999999999864 9999999873 211 11 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++++.
T Consensus 67 ----~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 67 ----RY-------------RVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred ----hC-------------CCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 12 66678999999 8999999999998888999999988754
No 160
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.56 E-value=1.4e-14 Score=108.17 Aligned_cols=89 Identities=10% Similarity=0.124 Sum_probs=72.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||++||+||++||++|+...|.+.++.++++ ++.++.|++|. .. +..
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~~----~l~------------------- 78 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------VP----EVS------------------- 78 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------CH----HHH-------------------
Confidence 48999999999999999999999999999984 49999999873 11 111
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|++++++ +|+++.++.|. .++++.+.|+++++.
T Consensus 79 ---~~~-------------~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 79 ---EKY-------------EISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp ---HHT-------------TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred ---HHc-------------CCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 112 667789999998 99999998885 567899999988753
No 161
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.33 E-value=2.9e-16 Score=113.82 Aligned_cols=103 Identities=12% Similarity=0.163 Sum_probs=80.9
Q ss_pred CCeeecCCCCCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCC
Q 027134 79 GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (227)
Q Consensus 79 G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
++.+.+...+||++||+||++||++|+...|.+ .++.+.++++ +.++.|++|. . +..+
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~--------~-~~~~--------- 69 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR-FVVASVSVDT--------P-EGQE--------- 69 (130)
Confidence 666778888999999999999999999999999 8888887764 8888887652 0 0000
Q ss_pred ccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECC-CCcE--EEecCCCCChhhHHHHHHHHhhh
Q 027134 156 FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK-EGNV--VERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 156 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~-~G~I--~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
....| ++.++|+++++|+ +|++ +.++.|..+.+.+.+.|++++.+
T Consensus 70 -------------~~~~~-------------~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 70 -------------LARRY-------------RVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 11222 6777999999996 5999 88999988888899999888753
No 162
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.55 E-value=1.5e-14 Score=104.51 Aligned_cols=89 Identities=7% Similarity=0.185 Sum_probs=72.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+++++||+||++||++|+...|.+.++.++++ ++.++.|++|. .. . .. +
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------~~-~---l~-~----------------- 84 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------NS-E---IV-S----------------- 84 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------CH-H---HH-H-----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------CH-H---HH-H-----------------
Confidence 68999999999999999999999999999985 49999999873 21 1 11 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.| ++.++|+++++ ++|+++.++.| .+++.+.+.|+++++.
T Consensus 85 ----~~-------------~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 85 ----KC-------------RVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred ----Hc-------------CCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 12 66678996666 89999999999 5778899999998864
No 163
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.55 E-value=1.9e-14 Score=106.26 Aligned_cols=91 Identities=9% Similarity=-0.033 Sum_probs=70.6
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++|+||++||++|+.+.|.+++++++++++ +.++.|++|. .. +
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~---------~---------------- 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITE-------VP---------D---------------- 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTT-------CC---------T----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEcccc-------CH---------H----------------
Confidence 4899999999999999999999999999999765 9999999873 10 0
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEe---------cCCCCC-hhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER---------YAPTTS-PLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~---------~~g~~~-~~~l~~~i~~lL~~ 226 (227)
....| ++.++|+++++ ++|+++.+ ..|..+ .+++.+.|+++++.
T Consensus 69 -~~~~~-------------~i~~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 69 -FNKMY-------------ELYDPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp -TTTSS-------------CSCSSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred -HHHHc-------------CCCCCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 11122 77889999888 57988874 445443 67788888888753
No 164
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.55 E-value=1.7e-14 Score=100.87 Aligned_cols=87 Identities=17% Similarity=0.217 Sum_probs=69.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
++|+++|+||++||++|+...|.++++.++++ ++.++.|++|. .. . .. +
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~-------~~-~---~~-~----------------- 68 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ-------CQ-G---TA-A----------------- 68 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH-H---HH-H-----------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc-------CH-H---HH-H-----------------
Confidence 58999999999999999999999999999984 49999999873 21 1 11 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
.| ++.++|+.+++ ++|+++.++.|.. .+++.+.|++++
T Consensus 69 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 69 ----TN-------------NISATPTFQFF-RNKVRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred ----hc-------------CCCcccEEEEE-ECCeEEEEEeCCC-HHHHHHHHHHhc
Confidence 12 66778998887 7999999999855 445888888765
No 165
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.55 E-value=2.8e-14 Score=104.75 Aligned_cols=105 Identities=18% Similarity=0.269 Sum_probs=74.2
Q ss_pred EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 74 l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+.+.+++.+...-.+++.+||+||++||++|+...|.++++.++++++ +.++.|++|. .. +.. ++
T Consensus 35 v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~-- 99 (140)
T 1v98_A 35 VVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDE-------HP----GLA-AR-- 99 (140)
T ss_dssp --------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CH----HHH-HH--
T ss_pred cccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCC-------CH----HHH-HH--
Confidence 445555555543333444999999999999999999999999999864 9999999873 21 111 11
Q ss_pred CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++|+.
T Consensus 100 -------------------~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 100 -------------------Y-------------GVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp -------------------T-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred -------------------C-------------CCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 2 56668998888 7999999999998888999999998864
No 166
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.54 E-value=3.2e-14 Score=100.04 Aligned_cols=89 Identities=15% Similarity=0.188 Sum_probs=72.2
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
.+|++++|.||++||++|+...|.++++.++++ ++.++.|++|. ..+ +
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~-~---------------------- 71 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE-------LKA-V---------------------- 71 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------CHH-H----------------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc-------cHH-H----------------------
Confidence 458999999999999999999999999999986 49999999873 211 1
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
...| ++.++|+.+++ ++|+++.++.| .+++.+.+.|+++++
T Consensus 72 ---~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 72 ---AEEW-------------NVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp ---HHHH-------------HCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred ---HHhC-------------CCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 1112 56668998777 79999999988 477889999998875
No 167
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.54 E-value=1.6e-14 Score=102.58 Aligned_cols=89 Identities=24% Similarity=0.285 Sum_probs=69.9
Q ss_pred CCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 85 SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 85 ~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
++.+||+++|+||++||++|+...|.++++.+++ ++.++.|+.|. .. +.. ++
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~-------~~----~~~-~~------------- 80 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK-------LE----ETA-RK------------- 80 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT-------SH----HHH-HH-------------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc-------cH----HHH-HH-------------
Confidence 3447899999999999999999999999999887 59999999873 11 111 11
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|+.+++ ++|+++.++.| .+++++.+.|+++|
T Consensus 81 --------~-------------~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 81 --------Y-------------NISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp --------T-------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred --------c-------------CCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 2 66678996666 89999999999 46778888888764
No 168
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.54 E-value=2.4e-14 Score=99.17 Aligned_cols=89 Identities=20% Similarity=0.339 Sum_probs=70.5
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
+.+||+++|.||++||++|+...|.++++.++++ ++.++.|++|. .. +.. ++
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~-~~-------------- 67 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ-------NE----EAA-AK-------------- 67 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------CH----HHH-HH--------------
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC-------CH----HHH-HH--------------
Confidence 3468999999999999999999999999999986 59999999873 21 111 11
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|+.+++ ++|+++.++.| .+.+++.+.|+++|
T Consensus 68 -------~-------------~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 68 -------Y-------------SVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp -------T-------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred -------c-------------CCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 2 56668997666 59999999999 47778888888764
No 169
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.54 E-value=2.1e-14 Score=101.94 Aligned_cols=85 Identities=20% Similarity=0.331 Sum_probs=67.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||+++|+||++||++|+...|.++++.+++++ +.++.|++|. .. +.. ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------~~----~l~-~~---------------- 78 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------SP----DIA-KE---------------- 78 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH----------------
Confidence 589999999999999999999999999999875 9999999873 21 111 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
| ++.++|+.+++ ++|+++.++.|.. ++.+.+.|++
T Consensus 79 -----~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 79 -----C-------------EVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp -----T-------------TCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred -----C-------------CCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 2 56668997665 8999999999977 7777776654
No 170
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.53 E-value=1.5e-14 Score=105.74 Aligned_cols=91 Identities=8% Similarity=0.040 Sum_probs=75.5
Q ss_pred CCCEEEEEEecCC--CCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 88 KGKLLLIVNVASQ--CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 88 ~gk~vlv~F~asw--C~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
.+++|||+|||+| |++|+...|.|.++.++|+++.+.|+-|++|. ..+.
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe-----------~~~l------------------ 83 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ-----------SEAI------------------ 83 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH-----------HHHH------------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC-----------CHHH------------------
Confidence 4668999999999 99999999999999999976448999998762 1111
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
...| +|+++||.+++ ++|+++.+..|..+.+.+.+.|+++|+
T Consensus 84 ----A~~y-------------gV~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 84 ----GDRF-------------GAFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp ----HHHH-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ----HHHc-------------CCccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 2223 78889998887 899999999999999999999998874
No 171
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.53 E-value=4e-14 Score=98.32 Aligned_cols=89 Identities=22% Similarity=0.337 Sum_probs=70.0
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
.+|++++|.||++||++|+...|.++++.++++. ++.++.|+.|. .. +.. ++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~--------------- 69 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDE-------CE----DIA-ME--------------- 69 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------CH----HHH-HH---------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccc-------hH----HHH-HH---------------
Confidence 4689999999999999999999999999999874 49999999873 21 111 11
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|+.+++ ++|+++.++.| .+++.+.+.|+++|
T Consensus 70 ------~-------------~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 70 ------Y-------------NISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp ------T-------------TCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred ------c-------------CCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 1 56668996555 79999999999 57777888887764
No 172
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.53 E-value=2e-14 Score=101.26 Aligned_cols=88 Identities=7% Similarity=0.088 Sum_probs=71.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
++++++|+||++||++|+...|.++++.++++ ++.++.|++|. .. + ..
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~-------~~-~---l~------------------- 65 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA-------RP-E---LM------------------- 65 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG-------CH-H---HH-------------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC-------CH-H---HH-------------------
Confidence 46899999999999999999999999998876 48999998762 11 1 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
..| ++.++|+++++ ++|+++.++.|..+++++.+.|+..+
T Consensus 66 ---~~~-------------~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 66 ---KEL-------------GFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp ---HHT-------------TCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred ---HHc-------------CCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 112 66778999999 89999999999888988988887665
No 173
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.53 E-value=3.1e-14 Score=100.40 Aligned_cols=88 Identities=14% Similarity=0.173 Sum_probs=70.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||+++|+||++||++|+...|.++++.++++ ++.++.|++|. .. +.. ++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~-------~~----~~~-~~---------------- 74 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE-------VS----EVT-EK---------------- 74 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------TH----HHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-------CH----HHH-HH----------------
Confidence 68999999999999999999999999999986 39999999873 11 111 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+.+++ ++|+++.++.|. +.+.+.+.|+++++
T Consensus 75 -----~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 112 (112)
T 1syr_A 75 -----E-------------NITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYAA 112 (112)
T ss_dssp -----T-------------TCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC-
T ss_pred -----c-------------CCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhhC
Confidence 2 56668986555 799999999998 88889988887763
No 174
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.52 E-value=4.3e-14 Score=100.18 Aligned_cols=89 Identities=21% Similarity=0.307 Sum_probs=71.4
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||+++|.||++||++|+...|.++++.++++ ++.++.|++|. .. +.. ++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~-~~---------------- 76 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------LK----DVA-EA---------------- 76 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------CH----HHH-HH----------------
Confidence 48999999999999999999999999999987 49999999873 11 111 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
| ++.++|+.+++ ++|+++.++.|. +.+++.+.|+++++.
T Consensus 77 -----~-------------~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 77 -----Y-------------NVEAMPTFLFI-KDGEKVDSVVGG-RKDDIHTKIVALMGS 115 (118)
T ss_dssp -----T-------------TCCSBSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHC-
T ss_pred -----c-------------CCCcCcEEEEE-eCCeEEEEecCC-CHHHHHHHHHHHhcc
Confidence 1 56668997777 799999999884 688899999998854
No 175
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.52 E-value=1.4e-14 Score=105.94 Aligned_cols=95 Identities=9% Similarity=0.112 Sum_probs=70.8
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCch
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAA 170 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 170 (227)
+++|+||++||++|+.+.|.+++++++++ +.++.|+++. ........+. ....
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~-----~~~~~~~d~~-------------------~~l~ 85 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGS-----LIGERELSAA-------------------RLEM 85 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECT-----TCCHHHHHHH-------------------HHHH
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCC-----chhhhhhhhh-------------------HHHH
Confidence 89999999999999999999999998875 8899999863 1111111110 0012
Q ss_pred hhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 171 PLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 171 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|+.++++ +|+++.++.|..+.+.+.+.++++++.
T Consensus 86 ~~~-------------~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 86 NKA-------------GVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHH-------------TCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred HHc-------------CCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 233 788899766665 999999999999998899999888753
No 176
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.52 E-value=3.9e-14 Score=102.19 Aligned_cols=105 Identities=6% Similarity=-0.054 Sum_probs=76.5
Q ss_pred EEecCCCCeeecCCC-CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc----CCcEEEEEeCCCCCCCCCCCHHHHHHH
Q 027134 73 SVKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNEQIQEF 147 (227)
Q Consensus 73 ~l~~~~G~~v~l~~~-~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~----~~~~vl~Vs~D~~~~~~~~~~~~~~~~ 147 (227)
.+..++++.+...-. .+++++|+||++||++|+...|.+.++.+++.. .++.++.|+.|. .. +.
T Consensus 16 ~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~-------~~----~l 84 (127)
T 3h79_A 16 RVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK-------YP----DV 84 (127)
T ss_dssp CCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT-------CH----HH
T ss_pred ceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc-------cH----hH
Confidence 345555655543222 488999999999999999999999999998853 248888888773 11 11
Q ss_pred HHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEE-EecCCCCChhhHHHHHHHH
Q 027134 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV-ERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~-~~~~g~~~~~~l~~~i~~l 223 (227)
+ ++ | ++.++|+++++++.+++. ..+.|..+.+.+.+.|+++
T Consensus 85 ~-~~---------------------~-------------~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 85 I-ER---------------------M-------------RVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp H-HH---------------------T-------------TCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred H-Hh---------------------c-------------CCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 1 11 2 667789999998776653 5678888888888888764
No 177
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.51 E-value=5.1e-14 Score=111.52 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=81.2
Q ss_pred EecCCCCeeecC-CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhC
Q 027134 74 VKDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (227)
Q Consensus 74 l~~~~G~~v~l~-~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~ 152 (227)
...++.+.+.-. .-++|++||+||++||++|+.+.|.+++++++++++ +.++.|++|. .. .
T Consensus 14 ~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~---------~- 75 (222)
T 3dxb_A 14 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP---------G- 75 (222)
T ss_dssp CEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CT---------T-
T ss_pred ceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CH---------H-
Confidence 444555544321 125889999999999999999999999999999876 9999999873 10 0
Q ss_pred CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
....| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+++++
T Consensus 76 ----------------l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 76 ----------------TAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp ----------------TGGGG-------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred ----------------HHHHc-------------CCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhcc
Confidence 11223 77889998888 589999999999999999999998874
No 178
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.51 E-value=3.2e-14 Score=102.40 Aligned_cols=89 Identities=21% Similarity=0.273 Sum_probs=69.3
Q ss_pred CCCEEEEEEecCCCC--------------cchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 88 KGKLLLIVNVASQCG--------------LTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 88 ~gk~vlv~F~aswC~--------------~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
.||+++|+||++||+ +|+...|.++++.++++++ +.++.|++|. ..
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~------------ 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP------------ 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH------------
Confidence 589999999999999 9999999999999999865 9999999873 10
Q ss_pred CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
.....| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 80 --------------~l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 --------------GTAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp --------------TTGGGG-------------TCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred --------------HHHHHc-------------CCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 012233 78889999999 99999999999888888998888765
No 179
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.50 E-value=4.7e-14 Score=100.39 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=66.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.|++++|+||++|||+|+...|.+.++.++++ ..+..+++|. ..+.+...++.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~-----~~~~~~~~~~~------------------- 80 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---AHIYFINSEE-----PSQLNDLQAFR------------------- 80 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTC-----GGGHHHHHHHH-------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---CeEEEEECCC-----cCcHHHHHHHH-------------------
Confidence 57899999999999999999999999999875 3466666662 00112222222
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHH
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIK 221 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~ 221 (227)
..| ++.++|+++++ ++|+++.++.|..+.+.+.+.|+
T Consensus 81 ---~~~-------------~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 81 ---SRY-------------GIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp ---HHH-------------TCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred ---HHc-------------CCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 122 77789999888 58999999999888877776653
No 180
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.50 E-value=2.2e-14 Score=102.57 Aligned_cols=91 Identities=19% Similarity=0.062 Sum_probs=71.4
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+|+++|+||++||++|+...|.++++.++++++ +.++.|++|. .. +..
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~~----~~~------------------- 68 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK-VRAGKVDCQA-------YP----QTC------------------- 68 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------CH----HHH-------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCcC-------CH----HHH-------------------
Confidence 5789999999999999999999999999999864 9999999873 21 111
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC----CChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT----TSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~----~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|++++++++|+ +.++.|. .+.+.+.+.|+++++.
T Consensus 69 ---~~~-------------~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 69 ---QKA-------------GIKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp ---HHT-------------TCCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred ---HHc-------------CCCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHHh
Confidence 112 6677899999988776 3444453 6788899999998864
No 181
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.50 E-value=3.4e-14 Score=101.21 Aligned_cols=90 Identities=16% Similarity=0.228 Sum_probs=73.1
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++|.||++||++|+...|.+.++.++++++ +.++.|++|. ..+ .. +
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~----------------- 78 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDT-------NPE----TA-R----------------- 78 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-H-----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CHH----HH-H-----------------
Confidence 5789999999999999999999999999999764 9999999873 211 11 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.| ++.++|+.+++ ++|+++.++.|..+.+.+.+.|++++.
T Consensus 79 ----~~-------------~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 79 ----NF-------------QVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred ----hc-------------CCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 12 66678998777 599999999999888888888877664
No 182
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.50 E-value=4.6e-14 Score=100.69 Aligned_cols=102 Identities=18% Similarity=0.250 Sum_probs=76.7
Q ss_pred EecCCCCeeecCC-C--CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHh
Q 027134 74 VKDAKGQDVDLSI-Y--KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACT 150 (227)
Q Consensus 74 l~~~~G~~v~l~~-~--~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~ 150 (227)
+.+.+|...++.+ . .|+++||+||++||++|+...|.++++.+++ .++.++.|++|. .. +..
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~-------~~----~~~-- 69 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK-------NG----NAA-- 69 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT-------CH----HHH--
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC-------CH----HHH--
Confidence 3455666555542 2 4899999999999999999999999999998 459999999873 21 111
Q ss_pred hCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECC---CCcEEEecCCCCChhhHHHHHHHHh
Q 027134 151 RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK---EGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~---~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
..| ++.++|++++++. +|+++.++.|..+. ++++.|++..
T Consensus 70 --------------------~~~-------------~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~~-~l~~~~~~~~ 112 (118)
T 2f51_A 70 --------------------DAY-------------GVSSIPALFFVKKEGNEIKTLDQFVGADVS-RIKADIEKFK 112 (118)
T ss_dssp --------------------HHT-------------TCCSSSEEEEEEEETTEEEEEEEEESCCHH-HHHHHHHHHC
T ss_pred --------------------Hhc-------------CCCCCCEEEEEeCCCCcceEEEeecCCCHH-HHHHHHHHhh
Confidence 112 6677899999975 49999999997644 5877777653
No 183
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.49 E-value=9.6e-14 Score=97.20 Aligned_cols=87 Identities=17% Similarity=0.245 Sum_probs=69.9
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcC--CcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ--GLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~--~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
+++++|+||++||++|+...|.+.++.+++... ++.++.|+.|. ..+ .. ++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~~----l~-~~--------------- 73 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA-------ERN----IC-SK--------------- 73 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT-------CHH----HH-HH---------------
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc-------cHh----HH-Hh---------------
Confidence 789999999999999999999999999987643 58899998873 211 11 11
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
| ++.++|+.+++ ++|+++.++.|..+.+.+.+.|++
T Consensus 74 ------~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 74 ------Y-------------SVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp ------T-------------TCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHH
T ss_pred ------c-------------CCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHh
Confidence 1 56678997777 789999999999888888888765
No 184
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2e-14 Score=105.17 Aligned_cols=89 Identities=17% Similarity=0.059 Sum_probs=67.3
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
..++++++|+||++||++|+...|.++++.+++++.++.++.|++|. .. +.. +++++..+.
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~-------~~----~~~-~~~~v~~~~------- 83 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR-------YT----DVS-TRYKVSTSP------- 83 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT-------CH----HHH-HHTTCCCCS-------
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc-------CH----HHH-HHccCcccC-------
Confidence 33567999999999999999999999999999987569999998873 22 222 343432100
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLS 215 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~ 215 (227)
++.++|+++++ ++|+++.++.|..+.+.
T Consensus 84 ---------------------~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~ 111 (137)
T 2dj0_A 84 ---------------------LTKQLPTLILF-QGGKEAMRRPQIDKKGR 111 (137)
T ss_dssp ---------------------SSSCSSEEEEE-SSSSEEEEESCBCSSSC
T ss_pred ---------------------CcCCCCEEEEE-ECCEEEEEecCcCchHH
Confidence 34568998888 78999999888766543
No 185
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.47 E-value=2.1e-14 Score=101.80 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=73.4
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcC--CcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ--GLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~--~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
++|+++|.||++||++|+...|.+.++.+++++. ++.++.|+.+. .
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~------------------------- 70 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------E------------------------- 70 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------C-------------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------C-------------------------
Confidence 5899999999999999999999999999999864 47777776542 0
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEE--EecCCCCChhhHHHHHHHHhhh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV--ERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~--~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
......| ++.++|+++++ ++|+++ .++.|..+.+.+.+.|+++++.
T Consensus 71 -~~~~~~~-------------~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 71 -SDLAQQY-------------GVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp -CSSHHHH-------------TCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred -HHHHHHC-------------CCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 0122333 77889999999 689877 8888988888999999887753
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.46 E-value=1.4e-13 Score=109.54 Aligned_cols=104 Identities=13% Similarity=0.225 Sum_probs=79.8
Q ss_pred EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCC--cEEEEEeCCCCCCCCCCCHHHHHHHHHhh
Q 027134 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPGDNEQIQEFACTR 151 (227)
Q Consensus 74 l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~--~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~ 151 (227)
+..++++.+.....+||+++|+||++||++|+...|.+.++++++++++ +.++.|+.|. .. +.+ ++
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~l~-~~ 84 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS-------AS----VLA-SR 84 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------CH----HHH-HH
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------CH----HHH-Hh
Confidence 4455566555444578999999999999999999999999999998765 8888888763 21 111 11
Q ss_pred CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 152 FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|++++++ +|+++ ++.|..+.+.+.+.+++++.
T Consensus 85 ---------------------~-------------~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~ 122 (241)
T 3idv_A 85 ---------------------F-------------DVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVSQ 122 (241)
T ss_dssp ---------------------T-------------TCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHHS
T ss_pred ---------------------c-------------CCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhccC
Confidence 2 667789998885 67777 57888888889999888764
No 187
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.19 E-value=5.1e-15 Score=102.63 Aligned_cols=103 Identities=19% Similarity=0.327 Sum_probs=76.2
Q ss_pred EecCCCCeeecCC-CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhC
Q 027134 74 VKDAKGQDVDLSI-YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (227)
Q Consensus 74 l~~~~G~~v~l~~-~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~ 152 (227)
+.+.+++.+...- -.+|+++|.||++||++|+...|.++++.++++++ +.++.|+.|. . . +
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~-~---~------ 64 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK-VKVVKVNVDE-------N-P---N------ 64 (106)
Confidence 3344444443222 25789999999999999999999999999998864 8888887762 1 0 0
Q ss_pred CCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
....| ++.++|+.+++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 65 ----------------~~~~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 65 ----------------TAAQY-------------GIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 11112 66678999988 89999999999888888888887764
No 188
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.44 E-value=5.6e-13 Score=88.81 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=65.9
Q ss_pred CEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCc
Q 027134 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNA 169 (227)
Q Consensus 90 k~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 169 (227)
.++++.||++|||+|+...|.++++.+++++ ++.++.|++|. +. + .
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~---------~-----------------~ 48 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP---------Q-----------------K 48 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC---------C-----------------T
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH---------H-----------------H
Confidence 5789999999999999999999999999875 49999999873 10 0 1
Q ss_pred hhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 170 APLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
...| ++.++|++++ +|++ ++.|..+.+++.+.|+++|
T Consensus 49 ~~~~-------------~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 49 AMEY-------------GIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp TTST-------------TTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred HHHC-------------CCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 1122 6777999777 7988 7788878888999888764
No 189
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.44 E-value=3.8e-13 Score=89.63 Aligned_cols=83 Identities=13% Similarity=0.172 Sum_probs=65.6
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCch
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAA 170 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 170 (227)
.+++.||++||++|+...|.++++.++++++ +.++.|++|. +. + ..
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~-------~~---------~-----------------~~ 48 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK-IDVEKIDIMV-------DR---------E-----------------KA 48 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS-CCEEEECTTT-------CG---------G-----------------GG
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH---------H-----------------HH
Confidence 4689999999999999999999999999864 9999998873 11 0 11
Q ss_pred hhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 171 PLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 171 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|++++ +|++ ++.|..+.+++.+.|+++|+
T Consensus 49 ~~~-------------~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 49 IEY-------------GLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp GGT-------------CSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred HhC-------------CceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 222 7778999877 8988 66787778889999988763
No 190
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=2.5e-13 Score=99.30 Aligned_cols=84 Identities=14% Similarity=0.105 Sum_probs=66.4
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+||++||+||++||++|+...|.+.++.++|+ ++.++.|++|. . .
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~-------~------------~-------------- 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS-------C------------I-------------- 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS-------S------------C--------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc-------C------------c--------------
Confidence 46899999999999999999999999999985 38888888763 0 0
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC-------ChhhHHHHHHHH
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-------SPLSIEKDIKKL 223 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~-------~~~~l~~~i~~l 223 (227)
..| ++.++|++++++ +|+++.++.|.. ..+++++.|++.
T Consensus 74 ---~~~-------------~i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 74 ---EHY-------------HDNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ---SSC-------------CSSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred ---ccC-------------CCCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 011 677799988885 999999988875 455677666654
No 191
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.43 E-value=6e-13 Score=101.22 Aligned_cols=88 Identities=6% Similarity=-0.048 Sum_probs=60.7
Q ss_pred CeeecCCCCCCEEEEEEecCCCCcchHhHHH---HHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCc
Q 027134 80 QDVDLSIYKGKLLLIVNVASQCGLTNSNYTE---LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEF 156 (227)
Q Consensus 80 ~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~---l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
+.+..+..+||+|+|+|||+||++|+...+. ..++.+.+++. +.++.|+.|. ..+..+.|. +.
T Consensus 30 ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~-fv~ikVD~de-------~~~l~~~y~-~~----- 95 (173)
T 3ira_A 30 EAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA-FVSIKVDREE-------RPDIDNIYM-TV----- 95 (173)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH-CEEEEEETTT-------CHHHHHHHH-HH-----
T ss_pred HHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc-CceeeeCCcc-------cCcHHHHHH-HH-----
Confidence 3444555579999999999999999998773 34566666553 8888887763 333222222 10
Q ss_pred cceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEe
Q 027134 157 PIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER 206 (227)
Q Consensus 157 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~ 206 (227)
...++ ++.++|++++++++|+++..
T Consensus 96 ------------~q~~~-------------gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 96 ------------CQIIL-------------GRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ------------HHHHH-------------SCCCSSEEEEECTTSCEEEE
T ss_pred ------------HHHHc-------------CCCCCcceeeECCCCCceee
Confidence 11122 67789999999999999987
No 192
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.41 E-value=1.6e-13 Score=102.18 Aligned_cols=77 Identities=12% Similarity=0.073 Sum_probs=54.3
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHH--HHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLY--DKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~--~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
..||+|+|+|||+||++|+...|.+.+.. .++.+ ..++.|++|. + .. +
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~----e--~~---------~------------- 91 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH----E--TT---------D------------- 91 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS----C--CS---------C-------------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC----C--ch---------h-------------
Confidence 35899999999999999999999887642 22222 3456666652 0 00 0
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
....| ++.++|+++++|++|+++.+..|.
T Consensus 92 ----~~~~~-------------~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 92 ----KNLSP-------------DGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp ----GGGCT-------------TCCCSSEEEEECTTSCBCTTCCCS
T ss_pred ----hHhhc-------------CCCCCCEEEEECCCCCEEEEEeCC
Confidence 00011 566789999999999999999997
No 193
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.41 E-value=5.5e-14 Score=101.39 Aligned_cols=90 Identities=19% Similarity=0.262 Sum_probs=71.5
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
.+||+++|.||++||++|+...|.++++.++++ ++.++.|++|. ..+
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~------------------------ 80 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LKE------------------------ 80 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SGG------------------------
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hHH------------------------
Confidence 468999999999999999999999999999986 48888888762 110
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
....| ++.++|+.+++ ++|+++.++.|. +.+++.+.|+++++.
T Consensus 81 --~~~~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 81 --VAEKY-------------NVEAMPTFLFI-KDGAEADKVVGA-RKDDLQNTIVKHVGA 123 (130)
T ss_dssp --GHHHH-------------TCCSSCCCCBC-TTTTCCBCCCTT-CTTTHHHHHHHHTSS
T ss_pred --HHHHc-------------CCCccceEEEE-eCCeEEEEEeCC-CHHHHHHHHHHHHhc
Confidence 12223 67778986665 899999998884 677899999988753
No 194
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.40 E-value=2.8e-13 Score=99.97 Aligned_cols=89 Identities=7% Similarity=0.102 Sum_probs=63.0
Q ss_pred CCEEEEEEecCC--CCcchHhHHHHHHHHHHHhcCCcE--EEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 89 GKLLLIVNVASQ--CGLTNSNYTELSQLYDKYKNQGLE--ILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 89 gk~vlv~F~asw--C~~C~~~~~~l~~l~~~~~~~~~~--vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
.+.+||+||++| |++|+...|.|.++.++| + ++. ++.|++|. ..+..
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~-----------~~~la---------------- 84 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQ-----------SEAIG---------------- 84 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHH-----------HHHHH----------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCC-----------CHHHH----------------
Confidence 345788899887 999999999999999999 4 388 99998652 11111
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| +|.++|+++++ ++|+++.++.|..+.+++.+.|+++++.
T Consensus 85 ------~~~-------------~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 85 ------DRF-------------NVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp ------HTT-------------TCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred ------Hhc-------------CCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 112 77789999999 8999999999998888999999988753
No 195
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.40 E-value=1.6e-12 Score=102.74 Aligned_cols=91 Identities=8% Similarity=0.009 Sum_probs=71.6
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc---CCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN---QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~---~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
.+++++|+||++||++|+...|.++++++++++ .++.++.|++|. .. . ..
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~~-~---l~---------------- 185 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------YP-E---WA---------------- 185 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------CH-H---HH----------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------CH-H---HH----------------
Confidence 345559999999999999999999999999983 359999998763 11 1 11
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|+++++ ++|+.+.++.|..+.+.+.+.|+++++
T Consensus 186 ------~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 186 ------DQY-------------NVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp ------HHT-------------TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ------HhC-------------CCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 122 67778996666 699999999999988889999988763
No 196
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.39 E-value=8.4e-13 Score=94.32 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=63.7
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDN 168 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 168 (227)
+++|||+||++||++|+...|.|+++.++|++ +.++.|++|. . .
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~-------~-------~-------------------- 66 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNS-------C-------I-------------------- 66 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGG-------T-------S--------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHH-------h-------H--------------------
Confidence 45999999999999999999999999999974 9999998762 0 0
Q ss_pred chhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC-------ChhhHHHHHH
Q 027134 169 AAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-------SPLSIEKDIK 221 (227)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~-------~~~~l~~~i~ 221 (227)
..| +++.+|+.+++ ++|+.+.+..|.. +.++++..|.
T Consensus 67 --~~~-------------~v~~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~ 110 (118)
T 3evi_A 67 --QHY-------------HDNCLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLA 110 (118)
T ss_dssp --TTC-------------CGGGCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHH
T ss_pred --HHC-------------CCCCCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHH
Confidence 011 67789997777 7999999988865 3445555554
No 197
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.36 E-value=1.9e-12 Score=114.44 Aligned_cols=109 Identities=13% Similarity=0.150 Sum_probs=82.5
Q ss_pred EecCCCCeeecCCC-CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc--CCcEEEEEeCCCCCCCCCCCHHHHHHHHHh
Q 027134 74 VKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNEQIQEFACT 150 (227)
Q Consensus 74 l~~~~G~~v~l~~~-~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~--~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~ 150 (227)
+...+++.+...-. .||+++|+|||+||++|+.+.|.+.++++++++ .++.++.|++|. ++..+.+
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~---------d~~~~l~-- 82 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE---------ETNSAVC-- 82 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS---------GGGHHHH--
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc---------cccHHHH--
Confidence 44445554443222 468999999999999999999999999999987 359999999862 0111222
Q ss_pred hCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECC---CCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 151 RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK---EGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~---~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| +|.++|+++++++ +|+++....|..+.+.+.+.|+++|+.
T Consensus 83 --------------------~~~-------------~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~ 128 (519)
T 3t58_A 83 --------------------REF-------------NIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALES 128 (519)
T ss_dssp --------------------HHT-------------TCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTT
T ss_pred --------------------HHc-------------CCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhh
Confidence 122 6777999999997 788888888888899999999988853
No 198
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.36 E-value=3.8e-12 Score=101.99 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=70.4
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc--CCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~--~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
.+++++|+||++||++|+...|.+.++++++++ .++.++.|++|. +.. .+.+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------~~~---~~l~----------------- 82 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE------ETN---SAVC----------------- 82 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS------TTT---HHHH-----------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc------hhh---HHHH-----------------
Confidence 468999999999999999999999999999987 359999999852 011 1111
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCC-----CcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-----GNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-----G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
..| ++.++|+++++++. |+.+ ++.| .+.+.+.+.|.++|+.
T Consensus 83 -----~~~-------------~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~ 128 (244)
T 3q6o_A 83 -----RDF-------------NIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALES 128 (244)
T ss_dssp -----HHT-------------TCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHT
T ss_pred -----HHc-------------CCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHh
Confidence 112 67778999999862 4444 5556 5788899999888753
No 199
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.31 E-value=1.5e-12 Score=92.22 Aligned_cols=94 Identities=10% Similarity=0.044 Sum_probs=66.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHh-cCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYK-NQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~-~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
+...+||+||++||++|+..-+.+...++... .+.+.++.|++|. + . ...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~-------~----------~-~~~----------- 67 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD-------P----------L-PPG----------- 67 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS-------C----------C-CTT-----------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC-------C----------C-chh-----------
Confidence 45689999999999999987765544332211 1126788888773 0 0 000
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
....| ++.++||.++++ +|+.+.+..|..+++.+.+.|++++..
T Consensus 68 --la~~~-------------~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~~ 111 (116)
T 3dml_A 68 --LELAR-------------PVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIGQ 111 (116)
T ss_dssp --CBCSS-------------CCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHHH
T ss_pred --HHHHC-------------CCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHhh
Confidence 11122 677899999998 999999999999999999999988753
No 200
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.29 E-value=1.9e-11 Score=98.11 Aligned_cols=111 Identities=11% Similarity=0.085 Sum_probs=79.1
Q ss_pred cCCCccCCeE--EecCCCCeeecC--------CCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc---CCcEEEEEeC
Q 027134 64 QSKTSVHDFS--VKDAKGQDVDLS--------IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN---QGLEILAFPC 130 (227)
Q Consensus 64 ~~g~~~p~f~--l~~~~G~~v~l~--------~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~---~~~~vl~Vs~ 130 (227)
..+..++.|- +.+..|....++ ++.|+++++.||++|||+|+...|.++++.++++. .++.+..|++
T Consensus 103 ~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~ 182 (243)
T 2hls_A 103 PAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEA 182 (243)
T ss_dssp CCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEET
T ss_pred CcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEEC
Confidence 3445555552 223345545454 35788999999999999999999999999999842 4588888887
Q ss_pred CCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 131 NQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 131 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
+. .. . .. ..| ++.++|++++ +|+++ +.|.
T Consensus 183 ~~-------~~-~---~~----------------------~~~-------------~V~~vPt~~i---~G~~~--~~G~ 211 (243)
T 2hls_A 183 YE-------NP-D---IA----------------------DKY-------------GVMSVPSIAI---NGYLV--FVGV 211 (243)
T ss_dssp TT-------CH-H---HH----------------------HHT-------------TCCSSSEEEE---TTEEE--EESC
T ss_pred cc-------CH-H---HH----------------------HHc-------------CCeeeCeEEE---CCEEE--EeCC
Confidence 63 11 1 11 112 6677899887 78875 6788
Q ss_pred CChhhHHHHHHHHhh
Q 027134 211 TSPLSIEKDIKKLLE 225 (227)
Q Consensus 211 ~~~~~l~~~i~~lL~ 225 (227)
.+.+++.+.|++.+.
T Consensus 212 ~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 212 PYEEDFLDYVKSAAE 226 (243)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhh
Confidence 888889999988775
No 201
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.29 E-value=7.4e-12 Score=100.39 Aligned_cols=74 Identities=12% Similarity=0.107 Sum_probs=59.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+|++|||+||++||++|+...|.|.+++++|++ +.|+.|+++. . .
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~------------~-----~---------------- 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN------------T-----G---------------- 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH------------H-----C----------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc------------H-----H----------------
Confidence 488999999999999999999999999999974 9999997540 0 1
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCC
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~ 211 (227)
....| ++.++|+++++ ++|+++.+++|..
T Consensus 177 -l~~~~-------------~I~~~PTll~~-~~G~~v~~~vG~~ 205 (245)
T 1a0r_P 177 -AGDRF-------------SSDVLPTLLVY-KGGELLSNFISVT 205 (245)
T ss_dssp -CTTSS-------------CTTTCSEEEEE-ETTEEEEEETTGG
T ss_pred -HHHHC-------------CCCCCCEEEEE-ECCEEEEEEeCCc
Confidence 01112 67779998877 5899999988864
No 202
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.29 E-value=3.9e-12 Score=111.54 Aligned_cols=105 Identities=13% Similarity=0.166 Sum_probs=78.5
Q ss_pred EecCCCCeeecCCC-CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcC-CcEEEEEeCCCCCCCCCCCHHHHHHHHHhh
Q 027134 74 VKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCNQFGAQEPGDNEQIQEFACTR 151 (227)
Q Consensus 74 l~~~~G~~v~l~~~-~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~-~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~ 151 (227)
++..+|+.+..... .||+|+|+|||+||++|+.+.|.+.++++++++. ++.++.|+.+. .
T Consensus 354 v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~------------------~ 415 (481)
T 3f8u_A 354 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA------------------N 415 (481)
T ss_dssp SEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS------------------S
T ss_pred eEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc------------------h
Confidence 33344554432222 4899999999999999999999999999999874 58888887652 0
Q ss_pred CCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcE-EEecCCCCChhhHHHHHHHHhh
Q 027134 152 FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV-VERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I-~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
. ....| ++.++|+++++++.|++ +.++.|..+.+.+.+.|++.+.
T Consensus 416 -~---------------~~~~~-------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 416 -D---------------VPSPY-------------EVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp -C---------------CCTTC-------------CCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCS
T ss_pred -h---------------hHhhC-------------CCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcC
Confidence 0 11112 67779999999888874 5678898888889999888754
No 203
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.27 E-value=1.5e-11 Score=86.19 Aligned_cols=86 Identities=12% Similarity=0.257 Sum_probs=63.3
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDN 168 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 168 (227)
+++++|+|+++|||+|+...|.++++.++ . ++.++-|.+|. ...+...+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-~v~~~~vdVde--------~r~~Sn~I-------------------- 72 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R-DMDGYYLIVQQ--------ERDLSDYI-------------------- 72 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-TCCEEEEEGGG--------GHHHHHHH--------------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-CceEEEEEeec--------CchhhHHH--------------------
Confidence 78999999999999999999999999884 2 49999999883 22221111
Q ss_pred chhhHHHhhhcCCCCCCCcccc-ceeEEEECCCCcEEEe-cCCCCChhhHHHHH
Q 027134 169 AAPLYKHLKSSKGGLFGDSIKW-NFSKFLVDKEGNVVER-YAPTTSPLSIEKDI 220 (227)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~i~~-~P~~~lid~~G~I~~~-~~g~~~~~~l~~~i 220 (227)
...| +|+| +|+.+++ ++|+++++ ..+..+.+.+++.+
T Consensus 73 -A~~~-------------~V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 73 -AKKT-------------NVKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp -HHHH-------------TCCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred -HHHh-------------CCccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 1122 7786 8998888 89999998 44555566555543
No 204
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.25 E-value=2.6e-11 Score=100.18 Aligned_cols=91 Identities=11% Similarity=0.153 Sum_probs=70.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++|+|||+||++|+...|.+.++.++++++ +.++.|++|. +. ..+.+ ++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~-------~~--~~~l~-~~---------------- 86 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL-------NK--NKALC-AK---------------- 86 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS-------TT--THHHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC-------cc--CHHHH-Hh----------------
Confidence 4789999999999999999999999999999875 9999999873 10 01112 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCc-----------------EEEecCCCCChhhHHHHHHHHh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGN-----------------VVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~-----------------I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| ++.++|++++++. |+ ....+.|..+.+.+.+.+.+.+
T Consensus 87 -----~-------------~I~~~Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 87 -----Y-------------DVNGFPTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp -----T-------------TCCBSSEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred -----C-------------CCCccceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 2 6777899999975 54 4667888888888888887665
No 205
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.24 E-value=1.2e-11 Score=88.72 Aligned_cols=45 Identities=11% Similarity=0.062 Sum_probs=40.5
Q ss_pred CCCCCEEEEEEecC-------CCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 86 IYKGKLLLIVNVAS-------QCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 86 ~~~gk~vlv~F~as-------wC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
+.+||+++|+||++ ||++|+...|.+.++.+++++ ++.++.|+++
T Consensus 21 ~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 21 QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 34589999999999 999999999999999999875 4999999986
No 206
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.24 E-value=1.1e-11 Score=97.74 Aligned_cols=85 Identities=12% Similarity=0.136 Sum_probs=65.1
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
+|++|||+||++||++|+...|.+.++.++|+ ++.|+.|++| . ..
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-------------~----~~---------------- 163 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-------------N----TG---------------- 163 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-------------H----HT----------------
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-------------c----HH----------------
Confidence 46899999999999999999999999999986 4889888742 0 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCCh-------hhHHHHHHH
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP-------LSIEKDIKK 222 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~-------~~l~~~i~~ 222 (227)
....| ++.++|+++++ ++|+++.++.|..+. +.+++.|.+
T Consensus 164 -l~~~~-------------~i~~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 164 -AGDRF-------------SSDVLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp -CSTTS-------------CGGGCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred -HHHHC-------------CCCCCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 01112 67789998888 599999999986653 556665554
No 207
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.24 E-value=1.4e-11 Score=105.19 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=76.8
Q ss_pred EecCCCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhc-----CCcEEEEEeCCCCCCCCCCCHHHHHHHH
Q 027134 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-----QGLEILAFPCNQFGAQEPGDNEQIQEFA 148 (227)
Q Consensus 74 l~~~~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~-----~~~~vl~Vs~D~~~~~~~~~~~~~~~~~ 148 (227)
+.+++++.+...--.+++++|.|||+||++|+...|.+.++.+++++ .++.++.|++|. . .+.+
T Consensus 7 v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------~----~~l~ 75 (382)
T 2r2j_A 7 ITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------H----SDIA 75 (382)
T ss_dssp -CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------C----HHHH
T ss_pred eEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------c----HHHH
Confidence 33444444432112578999999999999999999999999999953 248999998773 1 1122
Q ss_pred HhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEe-cCCCCChhhHHHHHHHHhh
Q 027134 149 CTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER-YAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 149 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~-~~g~~~~~~l~~~i~~lL~ 225 (227)
++ | +|.++|+++++ ++|+++.+ +.|..+.+.+.+.|.+.+.
T Consensus 76 -~~---------------------~-------------~v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 76 -QR---------------------Y-------------RISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKS 117 (382)
T ss_dssp -HH---------------------T-------------TCCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHS
T ss_pred -Hh---------------------c-------------CCCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhcc
Confidence 12 2 66778998877 68998874 8898888899999988764
No 208
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.23 E-value=6.2e-11 Score=94.18 Aligned_cols=90 Identities=11% Similarity=0.194 Sum_probs=71.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCC--cEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~--~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (227)
.+++++|+||++||++|+...|.+.++.+++++++ +.++.|+.|. .. . .+ ++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-------~~-~---l~-~~-------------- 199 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-------ET-D---LA-KR-------------- 199 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------CH-H---HH-HH--------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------CH-H---HH-HH--------------
Confidence 47899999999999999999999999999998654 8899998773 21 1 11 12
Q ss_pred CCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+.++++ +|+.+. +.|..+.+.+.+.|.+.+.
T Consensus 200 -------~-------------~v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 200 -------F-------------DVSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp -------T-------------TCCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred -------c-------------CCcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 2 666789988885 688776 7888888889999888764
No 209
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.22 E-value=5.8e-11 Score=77.49 Aligned_cols=37 Identities=8% Similarity=0.009 Sum_probs=31.9
Q ss_pred EEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEe
Q 027134 92 LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (227)
Q Consensus 92 vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs 129 (227)
..|+||++||++|+...|.++++.++++.+ +.++.|+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID-AEFEKIK 38 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC-EEEEEEC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc-eEEEEec
Confidence 358999999999999999999999998754 7777774
No 210
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.21 E-value=5.2e-11 Score=100.34 Aligned_cols=88 Identities=9% Similarity=0.099 Sum_probs=69.6
Q ss_pred CCCEEEEEEecCCCCcchHhHHH-------HHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCcccee
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTE-------LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFD 160 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~-------l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (227)
.+++++|+|||+||+ |+..+|. ++++.+++++.++.++.|++|. .. +.+
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~-------~~----~l~------------ 82 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK-------EA----KLA------------ 82 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT-------TH----HHH------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC-------CH----HHH------------
Confidence 478999999999999 9989898 8889999987679999999873 11 111
Q ss_pred eeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 161 KVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 161 ~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
..| +|.++|+++++ ++|++ ..+.|..+.+.+.+.|.+.+
T Consensus 83 ----------~~~-------------~v~~~Pt~~~~-~~g~~-~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 83 ----------KKL-------------GFDEEGSLYVL-KGDRT-IEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp ----------HHH-------------TCCSTTEEEEE-ETTEE-EEECSCCCHHHHHHHHHTTS
T ss_pred ----------Hhc-------------CCCccceEEEE-ECCcE-EEecCCCCHHHHHHHHHHhc
Confidence 122 67778999999 77884 57889888888888887665
No 211
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.17 E-value=7.5e-11 Score=93.28 Aligned_cols=86 Identities=10% Similarity=0.071 Sum_probs=66.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++++||++||++|+...|.++++.++++ ++.++.|++|. .. . ..
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------~~-~---l~------------------- 182 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------NQ-D---LA------------------- 182 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------CH-H---HH-------------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------CH-H---HH-------------------
Confidence 45566899999999999999999999999984 49999998763 11 1 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| ++.++|++++ +|+ +.++.|..+.+.+.+.|+++++
T Consensus 183 ---~~~-------------~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 183 ---EQF-------------QVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp ---HHT-------------TCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred ---HHc-------------CCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 112 6677899877 788 4567888888889998888764
No 212
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.17 E-value=7.1e-11 Score=104.15 Aligned_cols=91 Identities=15% Similarity=0.186 Sum_probs=74.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++|.||++||++|+...|.+.++.+++++.++.++.|+.|. . .+.+ ++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------~----~~l~-~~---------------- 81 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------N----QDLC-ME---------------- 81 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------C----HHHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------C----HHHH-Hh----------------
Confidence 588999999999999999999999999999987679999999873 2 1122 12
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcE--EEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV--VERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I--~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+++++. +|++ +.++.|..+.+.+.+.|.+.+.
T Consensus 82 -----~-------------~v~~~Pt~~~~~-~g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 82 -----H-------------NIPGFPSLKIFK-NSDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp -----T-------------TCCSSSEEEEEE-TTCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred -----c-------------CCCcCCEEEEEe-CCccccceeecCCCCHHHHHHHHHHhcC
Confidence 2 667789988885 5776 7788998888899999887763
No 213
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.17 E-value=8.3e-11 Score=108.91 Aligned_cols=92 Identities=15% Similarity=0.160 Sum_probs=73.5
Q ss_pred CCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 85 SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 85 ~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
.++.|++++|+||++||++|+.++|.+++++++++++ +.++.|+.|. .. . .+ +.
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~-~---~~-~~------------- 504 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTI-------HE-G---LC-NM------------- 504 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-H---HH-HH-------------
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCC-------CH-H---HH-HH-------------
Confidence 3447899999999999999999999999999999865 9999999873 21 1 11 11
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+++++ ++|++ ..+.|..+.+.+.+.|+++++
T Consensus 505 --------~-------------~v~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 505 --------Y-------------NIQAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp --------T-------------TCCSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHS
T ss_pred --------c-------------CCCcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcc
Confidence 2 56668999999 45877 678898888889999988764
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.16 E-value=9.4e-11 Score=102.70 Aligned_cols=90 Identities=16% Similarity=0.251 Sum_probs=73.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.|++++|.||++||++|+...|.+.++.++++++ +.++.|++|. .. +.+ ++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 70 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA-------NT----NTC-NK---------------- 70 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC-------CH----HHH-Hh----------------
Confidence 4589999999999999999999999999999887 9999999873 11 111 12
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| ++.++|+.+++ ++|+++.++.|..+.+.+.+.+.+.+.
T Consensus 71 -----~-------------~v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 71 -----Y-------------GVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp -----T-------------TCCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred -----c-------------CCCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhcc
Confidence 2 67778987777 789888999999889899999888763
No 215
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.16 E-value=1.4e-12 Score=91.42 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=33.8
Q ss_pred CeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHh
Q 027134 80 QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYK 119 (227)
Q Consensus 80 ~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~ 119 (227)
..++++++.||.+||+|||+||++|+...|.+.++.++++
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 3456777788999999999999999999999998876653
No 216
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.15 E-value=1.4e-10 Score=100.64 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=45.2
Q ss_pred EecCCCCeeec--CCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcC-------CcEEEEEeCCC
Q 027134 74 VKDAKGQDVDL--SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-------GLEILAFPCNQ 132 (227)
Q Consensus 74 l~~~~G~~v~l--~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~-------~~~vl~Vs~D~ 132 (227)
+..++++.+.- ..-.+|++||+|||+||++|+.+.|.+.+++++|+++ .+.++.|++|.
T Consensus 25 V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~ 92 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS 92 (470)
T ss_dssp EEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT
T ss_pred cEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC
Confidence 44444444432 2224589999999999999999999999999999743 28999999873
No 217
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.13 E-value=1.2e-10 Score=102.67 Aligned_cols=103 Identities=19% Similarity=0.134 Sum_probs=74.6
Q ss_pred EecCCCCeeecCCC-CCCEEEEEEecCCCCcchHhHHHHHHHHHHHh-c-CCcEEEEEeCCCCCCCCCCCHHHHHHHHHh
Q 027134 74 VKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYK-N-QGLEILAFPCNQFGAQEPGDNEQIQEFACT 150 (227)
Q Consensus 74 l~~~~G~~v~l~~~-~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~-~-~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~ 150 (227)
+...+|+.+...-. .+|++||+|||+||++|+...|.+.++.++++ . .++.++.|+.+.
T Consensus 360 v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------------------ 421 (504)
T 2b5e_A 360 VFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE------------------ 421 (504)
T ss_dssp EEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG------------------
T ss_pred ceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc------------------
Confidence 33444444432212 48899999999999999999999999999998 3 247777766431
Q ss_pred hCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcE--EEecCCCCChhhHHHHHHHHhh
Q 027134 151 RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV--VERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I--~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
. . ... | ++.++|+++++ ++|+. +.++.|..+.+.+.+.|++.+.
T Consensus 422 ~-~---------------~~~-~-------------~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 422 N-D---------------VRG-V-------------VIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp C-C---------------CSS-C-------------CCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred c-c---------------ccc-C-------------CceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 1 0 001 2 67789998888 78876 6778898888889999888764
No 218
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.13 E-value=1.3e-10 Score=98.11 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=68.8
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcC-CcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~-~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (227)
.+|+++|.||++||++|+...|.+.++.++++++ ++.++.|..+. . .
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~-------~----------~--------------- 313 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA-------N----------E--------------- 313 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT-------C----------B---------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc-------c----------c---------------
Confidence 5889999999999999999999999999999875 47777776542 0 0
Q ss_pred CCchhhHHHhhhcCCCCCCCccccceeEEEECCC-CcEEEecCCCCChhhHHHHHHHH
Q 027134 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-GNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
...| ++.++|++++++++ |+.+.++.|..+.+.+.+.|++.
T Consensus 314 ---~~~~-------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 314 ---VEAV-------------KVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp ---CSSC-------------CCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred ---hhhc-------------CCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 0011 67778999999655 67778888988888888877654
No 219
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.11 E-value=7.6e-10 Score=82.39 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=66.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
.||+|+|+|+++||+.|+..-... .++.+.+++ ++.++.+++| +. +-.++. +
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~--------~~-~~~~l~-~-------------- 95 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHD--------SE-EGQRYI-Q-------------- 95 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESS--------SH-HHHHHH-H--------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecC--------CH-hHHHHH-H--------------
Confidence 489999999999999999776543 345555444 3778877765 22 222332 2
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCC-CcEEEecCCCCChhhHHHHHHHHhh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-GNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.| ++.+.|+++++|++ |+.+.+..| .+++++.+.|+++++
T Consensus 96 -------~y-------------~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 96 -------FY-------------KLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp -------HH-------------TCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHH
T ss_pred -------Hc-------------CCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHH
Confidence 22 55668999999998 877777666 789899999988875
No 220
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.10 E-value=1.6e-10 Score=87.70 Aligned_cols=135 Identities=9% Similarity=0.077 Sum_probs=79.9
Q ss_pred CCeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCC------------------------
Q 027134 79 GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFG------------------------ 134 (227)
Q Consensus 79 G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~------------------------ 134 (227)
+....+.+..+|++|+.||..|||+|+...|.|.++.+++++ +.++.+.+...+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~ 89 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHW 89 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHH
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHH
Confidence 444556666799999999999999999999999999998765 666665543210
Q ss_pred ----CCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCC
Q 027134 135 ----AQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (227)
Q Consensus 135 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~ 210 (227)
.+..-+.+.+.+++ ++.|++...+.. .............-... . ...++.++|+.++ +|+ ...|.
T Consensus 90 ~lf~~~~~~~~~~l~~~a-~~~Gld~~~~~~-~~~~~~~~~~v~~~~~~-a--~~~gv~gtPt~~i---~g~---~~~G~ 158 (175)
T 3gyk_A 90 ALMGMSGKANETGVLRIA-REVGLDTEQLQR-DMEAPEVTAHIAQSMAL-A--QKLGFNGTPSFVV---EDA---LVPGF 158 (175)
T ss_dssp HHHTCSSCCSHHHHHHHH-HHTTCCHHHHHH-HTTCHHHHHHHHHHHHH-H--HHHTCCSSSEEEE---TTE---EECSC
T ss_pred HHHhcCCCCCHHHHHHHH-HHcCCCHHHHHH-HHhChHHHHHHHHHHHH-H--HHcCCccCCEEEE---CCE---EeeCC
Confidence 01112344555555 444555433210 00110000000000000 0 0017888998655 464 44688
Q ss_pred CChhhHHHHHHHHhhh
Q 027134 211 TSPLSIEKDIKKLLET 226 (227)
Q Consensus 211 ~~~~~l~~~i~~lL~~ 226 (227)
.+.+.+++.|+++++.
T Consensus 159 ~~~~~l~~~i~~~l~~ 174 (175)
T 3gyk_A 159 VEQSQLQDAVDRARKA 174 (175)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc
Confidence 8899999999998865
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.10 E-value=6.6e-11 Score=109.59 Aligned_cols=91 Identities=18% Similarity=0.045 Sum_probs=72.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.|++++|+||++||++|+...|.+++++++++++ +.++.|++|. .. . .+ ++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~-~~~~~vd~~~-------~~-~---~~-~~---------------- 724 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK-VRAGKVDCQA-------YP-Q---TC-QK---------------- 724 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------CH-H---HH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-ceEEEEECCC-------CH-H---HH-Hh----------------
Confidence 5789999999999999999999999999999764 9999999873 21 1 11 11
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCC----CCChhhHHHHHHHHhhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP----TTSPLSIEKDIKKLLET 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g----~~~~~~l~~~i~~lL~~ 226 (227)
| ++.++|+++++ ++|+++.++.| ..+.+.+.+.|+++|++
T Consensus 725 -----~-------------~v~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 725 -----A-------------GIKAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp -----T-------------TCCSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred -----c-------------CCCcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 2 66678999999 78988766666 45788899999988753
No 222
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.01 E-value=1.2e-09 Score=84.29 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=39.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++|+.||+.|||+|+...|.+.++.+++++ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 589999999999999999999999999999987 4889988886
No 223
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.01 E-value=3.7e-10 Score=88.88 Aligned_cols=121 Identities=12% Similarity=0.144 Sum_probs=70.0
Q ss_pred eeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCC-------------CHHHHHHH
Q 027134 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG-------------DNEQIQEF 147 (227)
Q Consensus 81 ~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~-------------~~~~~~~~ 147 (227)
.+.+...+||++|+.||++|||+|+...+.|+++.++ ++.++.+.....+ ..++ ....+.++
T Consensus 78 ~~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~-~~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 78 MIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQG-LDSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp SEEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTC-SSSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred CeeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccC-CCchHHHHHHHHHhccCHHHHHHHH
Confidence 3445556789999999999999999999999987642 5888877653200 0111 11223333
Q ss_pred HHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
. ...++++.. +....+....+...+ ++.++|++++. +|+. ..|..+++.+++.|+++++
T Consensus 153 ~-~~~~~~~~~---~~~~v~~~~~l~~~~----------gV~gtPt~v~~--dG~~---~~G~~~~~~l~~~l~~~~~ 211 (216)
T 1eej_A 153 M-AGKSVAPAS---CDVDIADHYALGVQL----------GVSGTPAVVLS--NGTL---VPGYQPPKEMKEFLDEHQK 211 (216)
T ss_dssp H-TTCCCCCCC---CSCCHHHHHHHHHHH----------TCCSSSEEECT--TSCE---EESCCCHHHHHHHHHHHHH
T ss_pred H-hCCCCChhH---HHHHHHHHHHHHHHc----------CCCccCEEEEc--CCeE---ecCCCCHHHHHHHHHHhhh
Confidence 3 222332211 000000011122222 78999997554 4653 3577778888888887654
No 224
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.01 E-value=4.8e-09 Score=88.93 Aligned_cols=90 Identities=16% Similarity=0.132 Sum_probs=68.1
Q ss_pred CCCEEEEEEecCCCCcchHhH------HHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceee
Q 027134 88 KGKLLLIVNVASQCGLTNSNY------TELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDK 161 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~------~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (227)
.+++++|.|||+||++|...- |.++++.+.+++.++.+..|+++. .. +.+
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~-------~~----~l~------------- 84 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK-------DA----AVA------------- 84 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT-------TH----HHH-------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc-------cH----HHH-------------
Confidence 468999999999999974322 578888888887679999999873 11 111
Q ss_pred eccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 162 VDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
..| +|+++|+++++. +|+++ .+.|..+.+.+.+.|.+.+.
T Consensus 85 ---------~~~-------------~V~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 85 ---------KKL-------------GLTEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp ---------HHH-------------TCCSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred ---------HHc-------------CCCcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 122 677789988885 68875 78898888889988887653
No 225
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.98 E-value=2.3e-09 Score=81.56 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=38.7
Q ss_pred CCCEEEEEEec-------CCCCcchHhHHHHHHHHHHHhc----CCcEEEEEeCCC
Q 027134 88 KGKLLLIVNVA-------SQCGLTNSNYTELSQLYDKYKN----QGLEILAFPCNQ 132 (227)
Q Consensus 88 ~gk~vlv~F~a-------swC~~C~~~~~~l~~l~~~~~~----~~~~vl~Vs~D~ 132 (227)
++.+|||+||| .||++|+...|.++++.++|.. .++.|.-|++|.
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~ 91 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE 91 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc
Confidence 46689999999 4999999999999999999971 238899998873
No 226
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.96 E-value=1e-09 Score=79.64 Aligned_cols=89 Identities=7% Similarity=-0.003 Sum_probs=68.9
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.+++++|+||++ |++|+...|.+.++.++|+++ +.++.|++|. .. +
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------~~---------~---------------- 67 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------FG---------A---------------- 67 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------TG---------G----------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------hH---------H----------------
Confidence 467899999999 899999999999999999876 9999998773 10 0
Q ss_pred CchhhHHHhhhcCCCCCCCcccc--ceeEEEECC-CCcEEEecC--CCCChhhHHHHHHHHhh
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKW--NFSKFLVDK-EGNVVERYA--PTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~--~P~~~lid~-~G~I~~~~~--g~~~~~~l~~~i~~lL~ 225 (227)
....| +++. +|+.++++. +|+. ++.. |..+.+.+.+.|+++++
T Consensus 68 -~a~~~-------------gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 68 -HAGNL-------------NLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp -GTTTT-------------TCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHH
T ss_pred -HHHHc-------------CCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHc
Confidence 01112 5555 899888874 5777 5665 88888899999998874
No 227
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.91 E-value=1.5e-09 Score=83.62 Aligned_cols=43 Identities=12% Similarity=0.155 Sum_probs=38.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++|+.||..|||+|....|.|.++.+++++ ++.+.-+.++
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 689999999999999999999999999999887 4888877764
No 228
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.84 E-value=5.6e-09 Score=80.41 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=38.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++|+.||..|||+|....+.|.++.++++. ++.+..+.++
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccc
Confidence 578999999999999999999999999999876 4888888764
No 229
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.84 E-value=1e-09 Score=77.44 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=27.2
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
+++++++ ||++|||+|+...+.|+++..+ +.++.|+.+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~ 55 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDEL 55 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCC
Confidence 4566666 9999999999999988876332 445544433
No 230
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.83 E-value=4.1e-09 Score=70.85 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=51.8
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhh
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPL 172 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 172 (227)
|+.||++||++|+...|.|.++..++ +.-|++|. +.+ +. ++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~-------~~~-l~----~~--------------------- 43 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDD-------DAA-LE----SA--------------------- 43 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTT-------CHH-HH----HH---------------------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCC-------CHH-HH----HH---------------------
Confidence 67899999999999999888754332 56677773 222 11 11
Q ss_pred HHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 173 YKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 173 ~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
| +++ +|+.++ .+|+.+. |..+.+.+++.|++.+.
T Consensus 44 ~-------------g~~-vPtl~~--~~G~~v~---g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 44 Y-------------GLR-VPVLRD--PMGRELD---WPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp H-------------TTT-CSEEEC--TTCCEEE---SCCCHHHHHHHHHTCC-
T ss_pred h-------------CCC-cCeEEE--ECCEEEe---CCCCHHHHHHHHHHHHH
Confidence 1 444 788666 6799875 66778888888887654
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.75 E-value=3.3e-08 Score=77.67 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=63.9
Q ss_pred CCCCCEEEEEEecC-CCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 86 IYKGKLLLIVNVAS-QCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 86 ~~~gk~vlv~F~as-wC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
...++++++.||++ ||++|+...|.+.++.+. .+ ++.++.|++| ..+ ..+.+ +++
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~--------~~~-~~~~~-~~~------------ 74 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFD--------TPE-GKELA-KRY------------ 74 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETT--------SHH-HHHHH-HHT------------
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCC--------Ccc-cHHHH-HHc------------
Confidence 34567889999999 999999999999998765 33 4999999876 211 12222 221
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEE-EecCCCCChhhHHHHHHHHh
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV-ERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~-~~~~g~~~~~~l~~~i~~lL 224 (227)
++.++|+.+++ ++|+.. .++.|....+.+.+.+..++
T Consensus 75 ----------------------~v~~~Pt~~~~-~~g~~~~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 75 ----------------------RIDRAPATTIT-QDGKDFGVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp ----------------------TCCSSSEEEEE-ETTBCCSEEEESCCCTTHHHHHHHHHH
T ss_pred ----------------------CCCcCceEEEE-cCCceeeEEEeccCcHHHHHHHHHHHH
Confidence 56668998887 456432 56667666677777776654
No 232
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.68 E-value=2.8e-08 Score=79.42 Aligned_cols=132 Identities=7% Similarity=0.045 Sum_probs=72.1
Q ss_pred CeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHH--------hh
Q 027134 80 QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFAC--------TR 151 (227)
Q Consensus 80 ~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~--------~~ 151 (227)
..+.+..-.+|++|+.||..|||+|++..+.+.++.++ .++.|..+.+.. ..+++....+.... +.
T Consensus 88 ~~i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~---~~~~s~~~a~a~~~a~d~~~~~~~ 161 (241)
T 1v58_A 88 HWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGV---IKPESPATAAAILASKDPAKTWQQ 161 (241)
T ss_dssp CCEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCC---SSTTHHHHHHHHHHSSSHHHHHHH
T ss_pred CCceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEECCc---CCCcHHHHHHHHHHccCHHHHHHH
Confidence 34455555788999999999999999999999887764 247777766532 11222222111110 01
Q ss_pred CCCCccc--eeeeccCCCCc----hhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 152 FKAEFPI--FDKVDVNGDNA----APLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 152 ~~~~~~~--~~~~d~~~~~~----~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
+...|.. +.......... ..-.... .. .++.++|++++.|.+|++ .+..|..+++.+.+.|++.+.
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~-~~------~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 162 YEASGGKLKLNVPANVSTEQMKVLSDNEKLM-DD------LGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp HHHTTTCCCCCCCSSCCHHHHHHHHHHHHHH-HH------HTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC---
T ss_pred HHHHhccCCCCccccCCHHHHHHHHHHHHHH-HH------cCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 1111100 00000000000 0000000 01 178899999999888976 466788888888888876654
No 233
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.66 E-value=9.6e-08 Score=75.22 Aligned_cols=90 Identities=10% Similarity=0.127 Sum_probs=64.0
Q ss_pred CCCEEEEEE----ecCCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeee
Q 027134 88 KGKLLLIVN----VASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKV 162 (227)
Q Consensus 88 ~gk~vlv~F----~aswC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (227)
.+.++|+.| |++||++|+..+|.+.++++++.+ .++.+..|+.|. . .+.+ ++
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~-------~----~~l~-~~----------- 76 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT-------H----KEET-EK----------- 76 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT-------C----HHHH-HH-----------
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc-------c----HHHH-HH-----------
Confidence 445566666 588999999999999999988843 348888887763 1 1112 12
Q ss_pred ccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 163 DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
| +|+++|+.++++ +|....++.|..+.+++.+.+..++
T Consensus 77 ----------~-------------~v~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 77 ----------Y-------------GVDRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp ----------T-------------TCCBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred ----------c-------------CCCcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHH
Confidence 2 667789988885 5666677788777777887777654
No 234
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.64 E-value=8.5e-08 Score=73.52 Aligned_cols=43 Identities=12% Similarity=0.158 Sum_probs=37.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++|+.||..|||+|....+.+.++.++++++ +.+..+.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~-v~~~~~p~~ 66 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKD-VRFTLVPAV 66 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-EEEEEEECC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCc-eEEEEeCcc
Confidence 5788999999999999999999999999998764 888777764
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.64 E-value=6.4e-08 Score=75.74 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=32.1
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.+|++|+.||..|||+|++..+.|+++.+ .++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~p 124 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LGITVRYLAFP 124 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CCcEEEEEECC
Confidence 57899999999999999999999988543 24777666543
No 236
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.63 E-value=5.9e-08 Score=67.59 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=33.9
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
.+|+.||++||++|....+.|.++.+++ ++.+.-|++|.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDG 68 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC
Confidence 5688899999999999999999998885 38888888873
No 237
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.54 E-value=6e-07 Score=67.70 Aligned_cols=49 Identities=10% Similarity=0.168 Sum_probs=40.9
Q ss_pred eecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHH--hcCCcEEEEEeCC
Q 027134 82 VDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKY--KNQGLEILAFPCN 131 (227)
Q Consensus 82 v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~--~~~~~~vl~Vs~D 131 (227)
+.+.+..++++|+.|+..+||+|....+.+.++.++| .+ ++.++...+.
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCC
Confidence 4455567899999999999999999999999999998 43 3888887765
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.54 E-value=4.1e-07 Score=80.50 Aligned_cols=82 Identities=10% Similarity=0.027 Sum_probs=61.5
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
.++..++.||++|||+|+...|.++++..+++ ++.+..|+.|. .. + .. ++
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~-------~~-~---~~-~~---------------- 165 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT-------FQ-N---EI-TE---------------- 165 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT-------CH-H---HH-HH----------------
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh-------hH-H---HH-HH----------------
Confidence 46788999999999999999999999988876 48998898773 11 1 11 12
Q ss_pred CchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHH
Q 027134 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKK 222 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~ 222 (227)
| ++..+|++++ +|+.+.. |..+.+++.+.+++
T Consensus 166 -----~-------------~i~svPt~~i---~g~~~~~--G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 166 -----R-------------NVMGVPAVFV---NGKEFGQ--GRMTLTEIVAKVDT 197 (521)
T ss_dssp -----T-------------TCCSSSEEEE---TTEEEEE--SCCCHHHHHHHHCC
T ss_pred -----h-------------CCCccCEEEE---CCEEEec--CCCCHHHHHHHHhh
Confidence 1 5666899766 7888765 77777777776644
No 239
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.52 E-value=1.7e-07 Score=72.18 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=39.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++|+.||..|||+|+...|.+.++.++++++ +.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~-v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD-MYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT-EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC-eEEEEecCC
Confidence 4789999999999999999999999999998874 888888876
No 240
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.48 E-value=4e-07 Score=60.07 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=32.0
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
|+.||++|||+|+...+.|+++.++++ ++.+..|++|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 577999999999999999999988764 4888888765
No 241
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.46 E-value=1.3e-06 Score=69.88 Aligned_cols=90 Identities=12% Similarity=0.117 Sum_probs=64.2
Q ss_pred CCCEEEEEEe--cCCCCcchHhHHHHHHHHHHHhc--CCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeec
Q 027134 88 KGKLLLIVNV--ASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVD 163 (227)
Q Consensus 88 ~gk~vlv~F~--aswC~~C~~~~~~l~~l~~~~~~--~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 163 (227)
.+++|||+|| |+||+ ..|.+.++.++|++ .++.|..|++|+++. +. . .+.+ ++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~--~~-n---~~la-~~------------ 88 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGE--LE-N---KALG-DR------------ 88 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTT--CT-T---HHHH-HH------------
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccc--cc-c---HHHH-HH------------
Confidence 4679999999 99998 88999999999974 459999999873210 00 1 1222 22
Q ss_pred cCCCCchhhHHHhhhcCCCCCCCccc--cceeEEEECCCCcE--EEec--CCCCChhhHHHHHHHHh
Q 027134 164 VNGDNAAPLYKHLKSSKGGLFGDSIK--WNFSKFLVDKEGNV--VERY--APTTSPLSIEKDIKKLL 224 (227)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~i~--~~P~~~lid~~G~I--~~~~--~g~~~~~~l~~~i~~lL 224 (227)
| +|. ++||.+++- |++ ...+ .|..+.+.+.+.|++.+
T Consensus 89 ---------~-------------~V~~~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 89 ---------Y-------------KVDDKNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp ---------T-------------TCCTTSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred ---------h-------------CCCcCCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 2 566 689988884 773 4556 78888888888887764
No 242
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.45 E-value=1.4e-07 Score=61.88 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=27.8
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++.||++|||+|+...+.++++.+++ ++.+..+.+|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 56789999999999999998876654 3555556655
No 243
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.45 E-value=2.1e-07 Score=64.02 Aligned_cols=38 Identities=11% Similarity=0.116 Sum_probs=30.7
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.+++|+.||++|||+|+...+.|.++. +++.+.-|++|
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 457888899999999998888887653 23888888887
No 244
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.37 E-value=1.7e-06 Score=68.95 Aligned_cols=90 Identities=16% Similarity=0.235 Sum_probs=63.4
Q ss_pred CCCEEEEEEec--CCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeecc
Q 027134 88 KGKLLLIVNVA--SQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (227)
Q Consensus 88 ~gk~vlv~F~a--swC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (227)
.++++||.||+ +||+ ..|.+.++.+++++ .++.|..|++|+++.. .. .+.+ ++
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~--~~----~~l~-~~------------- 76 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDK--LN----MELS-EK------------- 76 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSC--CS----HHHH-HH-------------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccch--hh----HHHH-HH-------------
Confidence 46799999999 9998 88999999999974 3589999987631100 01 1122 22
Q ss_pred CCCCchhhHHHhhhcCCCCCCCccc--cceeEEEECCCCc--EEEecCCCCChhhHHHHHHHH
Q 027134 165 NGDNAAPLYKHLKSSKGGLFGDSIK--WNFSKFLVDKEGN--VVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~--~~P~~~lid~~G~--I~~~~~g~~~~~~l~~~i~~l 223 (227)
| +|. ++|+++++ ++|+ ...++.|..+.+.+.+.|++.
T Consensus 77 --------~-------------~V~~~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 77 --------Y-------------KLDKESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp --------T-------------TCCGGGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred --------c-------------CCCCCCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 2 566 68888888 5676 355778887888888888765
No 245
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.34 E-value=1.6e-06 Score=66.47 Aligned_cols=131 Identities=11% Similarity=0.078 Sum_probs=84.1
Q ss_pred ccccCCCccCC--e--EEecCC---------C--CeeecCCC--CCCEEEEEEe-cCCCCcchH-hHHHHHHHHHHH-hc
Q 027134 61 MASQSKTSVHD--F--SVKDAK---------G--QDVDLSIY--KGKLLLIVNV-ASQCGLTNS-NYTELSQLYDKY-KN 120 (227)
Q Consensus 61 ~~~~~g~~~p~--f--~l~~~~---------G--~~v~l~~~--~gk~vlv~F~-aswC~~C~~-~~~~l~~l~~~~-~~ 120 (227)
+...+|+++|. + .....+ | +++++++. +||.|||.+. +..-|.|-. ++|.+.+.++++ +.
T Consensus 24 ~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~ 103 (199)
T 4h86_A 24 MSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKE 103 (199)
T ss_dssp BCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHh
Confidence 44478999995 3 222221 2 35777774 7998888776 888999975 699998888765 77
Q ss_pred CCc-EEEEEeCCCCCCCCCCCHHHHHHHHHhhCCC----CccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEE
Q 027134 121 QGL-EILAFPCNQFGAQEPGDNEQIQEFACTRFKA----EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKF 195 (227)
Q Consensus 121 ~~~-~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~ 195 (227)
+|+ +|+.||+| +.-.+++|. +..+. .++++ .|.+++ ..+.+....... +.+.+..-..+
T Consensus 104 kGvd~I~ciSVN--------D~FVm~AW~-k~~~~~~~~~i~~l--aD~~~e-ftkalGl~~~~~----~gg~RS~Rya~ 167 (199)
T 4h86_A 104 KEVDQVIVVTVD--------NPFANQAWA-KSLGVKDTTHIKFA--SDPGCA-FTKSIGFELAVG----DGVYWSGRWAM 167 (199)
T ss_dssp SCCCEEEEEESS--------CHHHHHHHH-HHTTCCCCSSEEEE--ECGGGH-HHHHTTCEEEEE----TTEEEECSEEE
T ss_pred cCCcEEEEEEcC--------CHHHHHHHH-HHhccccccccccc--CCcchH-HHHhcCceeecC----CCcceeeEEEE
Confidence 777 79999998 677888887 44444 34455 454444 222332211111 11233334578
Q ss_pred EECCCCcEEEecC
Q 027134 196 LVDKEGNVVERYA 208 (227)
Q Consensus 196 lid~~G~I~~~~~ 208 (227)
||| ||+|.+.++
T Consensus 168 IVd-DGvV~~~~v 179 (199)
T 4h86_A 168 VVE-NGIVTYAAK 179 (199)
T ss_dssp EEE-TTEEEEEEE
T ss_pred EEE-CCEEEEEEE
Confidence 888 999998865
No 246
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.15 E-value=2.7e-06 Score=65.14 Aligned_cols=44 Identities=5% Similarity=0.059 Sum_probs=37.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
.++++||.||..|||+|+...|.+ .++.+++.+ ++.++.+.++.
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 59 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVSL 59 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEechh
Confidence 467899999999999999999986 577777776 48899988873
No 247
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.15 E-value=2.1e-06 Score=56.10 Aligned_cols=33 Identities=6% Similarity=0.300 Sum_probs=26.3
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
++.||++|||+|+...+.|.+ .++.+..|++|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVDR 35 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECCC
Confidence 567999999999988887765 357788888873
No 248
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.14 E-value=6.2e-06 Score=65.74 Aligned_cols=43 Identities=9% Similarity=0.150 Sum_probs=35.1
Q ss_pred CCEEEEEEecCC--CCcchHhHHHHHHHHHHHhc-CC---cEEEEEeCC
Q 027134 89 GKLLLIVNVASQ--CGLTNSNYTELSQLYDKYKN-QG---LEILAFPCN 131 (227)
Q Consensus 89 gk~vlv~F~asw--C~~C~~~~~~l~~l~~~~~~-~~---~~vl~Vs~D 131 (227)
+++|+|.||+.| |++|+...+.+.++.+.+.. +| +.++.++.|
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 568999999999 99999999999999988532 22 777777766
No 249
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.14 E-value=1.1e-05 Score=67.75 Aligned_cols=91 Identities=11% Similarity=0.141 Sum_probs=63.5
Q ss_pred CEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCc
Q 027134 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNA 169 (227)
Q Consensus 90 k~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 169 (227)
+.++|.|+++||++|....+.++++.++|+++ +.++.|+.|. +...+.+ +.+
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~---------~~~~~~~-~~f----------------- 187 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDH---------TDNQRIL-EFF----------------- 187 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTS---------GGGHHHH-HHT-----------------
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCCh---------HHHHHHH-HHc-----------------
Confidence 57789999999999999999999999999987 8888887651 0112222 222
Q ss_pred hhhHHHhhhcCCCCCCCcccc--ceeEEEECCCCcE-EEec-CCCCChhhHHHHHHHHhh
Q 027134 170 APLYKHLKSSKGGLFGDSIKW--NFSKFLVDKEGNV-VERY-APTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~i~~--~P~~~lid~~G~I-~~~~-~g~~~~~~l~~~i~~lL~ 225 (227)
++.. .|+..+++..+.. .+.. .|..+.+.+.+.+++.++
T Consensus 188 -----------------gi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 188 -----------------GLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp -----------------TCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHT
T ss_pred -----------------CCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhc
Confidence 3333 6888888764432 3332 256778889999988764
No 250
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.10 E-value=1.3e-06 Score=71.49 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=28.8
Q ss_pred eeecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHHHH
Q 027134 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKY 118 (227)
Q Consensus 81 ~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~ 118 (227)
.+.+++.-++..+++|||+|||+|+...|.++++.+++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 44455544445579999999999999999999886554
No 251
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.08 E-value=1.3e-05 Score=58.99 Aligned_cols=116 Identities=12% Similarity=0.084 Sum_probs=63.4
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHH-------------HHHHHHHhhCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE-------------QIQEFACTRFK 153 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~-------------~~~~~~~~~~~ 153 (227)
-.++.+|+.|...+||.|++..+.++++ + ++.|+.+.+-.. ...+++.. .|.++. ...+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~-~~~~~s~~~a~a~~ca~d~~~a~~~~~-~~g~ 83 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIA-GLHPDAARKAQILWCQPDRAKAWTDWM-RKGK 83 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEECCCT-TTCTTHHHHHHHHHTSSSHHHHHHHHH-HHCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEEcccc-ccChhHHHHHHHHHcCCCHHHHHHHHH-hCCC
Confidence 3578999999999999999999988654 2 366666654310 01122211 122211 1111
Q ss_pred CCccceeeeccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.+- -...+ ...+..-... ... .+|+++|+.++ .+|++ ..|..+.+.+++.|++.+.+
T Consensus 84 ~~~-~~~~~---~~~v~~~~~l-a~~------~gI~gtPt~vi--~nG~~---i~G~~~~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 84 FPV-GGSIC---DNPVAETTSL-GEQ------FGFNGTPTLVF--PNGRT---QSGYSPMPQLEEIIRKNQQE 140 (147)
T ss_dssp CCT-TCCCC---SCSHHHHHHH-HHH------TTCCSSCEEEC--TTSCE---EESCCCTTHHHHHHHHTSCC
T ss_pred CCC-ccHHH---HHHHHHHHHH-HHH------hCCCccCEEEE--ECCEE---eeCCCCHHHHHHHHHHHHHh
Confidence 110 00000 0011111111 011 17899999666 57874 45777888999999887654
No 252
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.06 E-value=2.7e-06 Score=65.04 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=35.4
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++++||.||..|||+|....|.+.++.+++ ++.+.-+.++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEecc
Confidence 689999999999999999999999999998 3777777765
No 253
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.99 E-value=1.5e-05 Score=50.93 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=25.6
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++.|+++|||+|+...+.|+++ ++.+..+++|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 4668999999999988887753 5777778877
No 254
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.94 E-value=2.8e-05 Score=58.53 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=36.6
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++||.|+.-.||+|....+.+.++.+++.+. +.++-+.+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~~ 62 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHVS 62 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEECS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEecC
Confidence 5788999999999999999999999999998775 667666654
No 255
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.92 E-value=1.7e-06 Score=66.91 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=39.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
.++++||.||+.|||+|+...|.+ .++.++++++ +.+.-+.++.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~-v~~~~~~v~~ 158 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG-VKMTKYHVNF 158 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT-CCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC-CEEEEeccCc
Confidence 578999999999999999999998 9999998764 9999999873
No 256
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.89 E-value=2.8e-05 Score=59.24 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=37.7
Q ss_pred CCCEEEEEEecCCCCcchHhHHHH-HHHHHHHhcCCcEEEEEeCCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l-~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
.+++++|.||..+||.|....+.+ .++.+++..+ +.+..+.++.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~~ 60 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLET 60 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECTT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecCc
Confidence 467888999999999999999999 9999988754 8888888763
No 257
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.83 E-value=0.00019 Score=54.36 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=69.4
Q ss_pred CCCCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeee
Q 027134 86 IYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKV 162 (227)
Q Consensus 86 ~~~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (227)
.-.+|+++|++..+||+.|....... .++.+-+++ ++.+.+.+++ +.+....++ ...+..
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~--------~~e~~~~~~-~~~~~~------- 114 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLT--------KDSNRARFL-TMCNRH------- 114 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECC--------SHHHHHHHH-HHHHHH-------
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCC--------Cchhhhhhh-hhhhhh-------
Confidence 44789999999999999877655332 224444444 4888998887 344333332 110000
Q ss_pred ccCCCCchhhHHHhhhcCCCCCCCccccceeEEEECCCC---cEEEecCCCCChhhHHHHHHHHhh
Q 027134 163 DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEG---NVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G---~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
.+..+....+.+ ++...|+..+|+++| +++.+..|..+++++.+.|.+.++
T Consensus 115 --~g~~~a~~~~~~----------~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 115 --FGSVVAQTIRTQ----------KTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp --TCHHHHHHHHHS----------CSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHhhc----------CCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 011011111111 567789999998764 789999999999988888877654
No 258
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.74 E-value=0.00043 Score=46.50 Aligned_cols=78 Identities=12% Similarity=0.119 Sum_probs=49.5
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhh
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPL 172 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 172 (227)
|+.|..+|||.|.+.-..|.+ +|+.+.-+++|. +.+..+... +.. .
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~~-------d~~~~~~~~-~~~------------~------- 51 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIEH-------NRAAAEFVG-SVN------------G------- 51 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETTT-------CHHHHHHHH-HHS------------S-------
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcCC-------CHHHHHHHH-HHc------------C-------
Confidence 455889999999876655543 568888888874 444433332 210 0
Q ss_pred HHHhhhcCCCCCCCccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 173 YKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 173 ~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
|.+..|++++ .||.++.- .+.+++++.|+++.
T Consensus 52 --------------G~~tVP~I~i--~Dg~~l~~----~~~~el~~~L~el~ 83 (92)
T 2lqo_A 52 --------------GNRTVPTVKF--ADGSTLTN----PSADEVKAKLVKIA 83 (92)
T ss_dssp --------------SSSCSCEEEE--TTSCEEES----CCHHHHHHHHHHHH
T ss_pred --------------CCCEeCEEEE--eCCEEEeC----CCHHHHHHHHHHhc
Confidence 3344688555 46776532 35778988888875
No 259
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.67 E-value=0.00012 Score=56.02 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=37.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHH---HHHHHHHhcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l---~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++++|+.|+.-|||+|....+.+ .++.+++.++ +.++.+.++
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 468999999999999999999987 6899998764 888888876
No 260
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=7.1e-05 Score=53.67 Aligned_cols=33 Identities=6% Similarity=0.152 Sum_probs=24.5
Q ss_pred EEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 92 LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 92 vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
++| |+++|||+|+...+.|.++ ++.+..|.+|.
T Consensus 29 vvv-f~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~ 61 (130)
T 2cq9_A 29 VVI-FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDL 61 (130)
T ss_dssp EEE-EECSSCSHHHHHHHHHHHH-------TCCCEEEETTT
T ss_pred EEE-EEcCCChHHHHHHHHHHHc-------CCCcEEEECcC
Confidence 444 9999999999988888764 35566677763
No 261
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.55 E-value=5.5e-05 Score=52.85 Aligned_cols=35 Identities=9% Similarity=0.104 Sum_probs=25.7
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcE---EEEEeCCC
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLE---ILAFPCNQ 132 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~---vl~Vs~D~ 132 (227)
..|+.|+++|||+|+...+.|.+ .++. +..|++|.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~-------~~~~~~~~~~vdi~~ 56 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK-------FSFKRGAYEIVDIKE 56 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT-------SCBCTTSEEEEEGGG
T ss_pred CCEEEEEeCCChhHHHHHHHHHH-------cCCCcCceEEEEccC
Confidence 34667999999999987777654 3455 77777763
No 262
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.52 E-value=8.2e-05 Score=50.86 Aligned_cols=35 Identities=20% Similarity=0.124 Sum_probs=24.4
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++.|+++|||+|+...+.|.++..+++ + +..+++|
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~--~~~vdi~ 48 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--L--LEFVDIT 48 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--S--EEEEEGG
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--c--cEEEEcc
Confidence 566999999999998888876433322 1 5556665
No 263
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.51 E-value=9.1e-05 Score=54.27 Aligned_cols=33 Identities=6% Similarity=0.153 Sum_probs=23.9
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.|+| |+++|||+|+...+.|.++ ++.+..|.+|
T Consensus 50 ~Vvv-f~~~~Cp~C~~~k~~L~~~-------~i~~~~vdId 82 (146)
T 2ht9_A 50 CVVI-FSKTSCSYCTMAKKLFHDM-------NVNYKVVELD 82 (146)
T ss_dssp SEEE-EECTTCHHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EECCCChhHHHHHHHHHHc-------CCCeEEEECc
Confidence 3444 9999999999988888764 3455556665
No 264
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.41 E-value=0.00037 Score=47.58 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=24.0
Q ss_pred EEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 92 LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 92 vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.++.||++|||+|+...+.|.++ ++.+-.+.+|
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~ 55 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL-------GVDFDYVYVD 55 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH-------TBCEEEEEGG
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-------CCCcEEEEee
Confidence 35559999999999988888764 3445556655
No 265
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.40 E-value=0.00053 Score=53.88 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=37.2
Q ss_pred cCCCCCCEEEEEEecCCCCcchHhHHHH-HHHHHHHhc-CCcEEEEEeCC
Q 027134 84 LSIYKGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKN-QGLEILAFPCN 131 (227)
Q Consensus 84 l~~~~gk~vlv~F~aswC~~C~~~~~~l-~~l~~~~~~-~~~~vl~Vs~D 131 (227)
+.+-.++++|+.|+.-.||.|....+.+ .++.++|-+ .++.++...+.
T Consensus 34 ~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 34 LGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred cCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 4444678999999999999999988864 778888843 23888877764
No 266
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.29 E-value=0.0009 Score=43.13 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=24.2
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++.|+++|||.|+...+.|.+. ++.+..+++|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECC
Confidence 4568899999999888777653 4666677776
No 267
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.21 E-value=0.00087 Score=47.01 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=24.1
Q ss_pred EEEEecCCCCcchHh-HHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 93 LIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 93 lv~F~aswC~~C~~~-~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
|+.|+++|||+|+.. .+.|.++ ...++.+..|++|.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~----~~~~i~~~~vdid~ 63 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL----KVPRSKVLVLQLND 63 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS----CCCGGGEEEEEGGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc----CCCCCCeEEEECcc
Confidence 455999999999987 4444332 11127788888873
No 268
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.19 E-value=0.0012 Score=43.69 Aligned_cols=32 Identities=13% Similarity=0.173 Sum_probs=22.6
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++.|+++|||+|++..+.|.++ ++.+-.+.+|
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~-------gi~~~~~~v~ 45 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE-------GVDFEVIWID 45 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCcEEEEee
Confidence 4558899999999887777764 3444455555
No 269
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.06 E-value=0.0018 Score=42.80 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=24.7
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
++.|+.+|||.|+...+.|.+ .++.+..+++|
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~-------~~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLAR-------KGAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 566889999999987777664 34777778876
No 270
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.02 E-value=0.0024 Score=49.15 Aligned_cols=47 Identities=2% Similarity=0.051 Sum_probs=36.4
Q ss_pred CCCCCCEEEEEEecCCCCcchHhHHHH-HHHHHHHhc-CCcEEEEEeCC
Q 027134 85 SIYKGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKN-QGLEILAFPCN 131 (227)
Q Consensus 85 ~~~~gk~vlv~F~aswC~~C~~~~~~l-~~l~~~~~~-~~~~vl~Vs~D 131 (227)
..-.++++|+.|+.-.||.|....+.+ ..+.++|.+ .++.++...+.
T Consensus 25 G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 25 GKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred cCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 334678999999999999999988876 566677754 24888888764
No 271
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.01 E-value=0.0019 Score=42.16 Aligned_cols=21 Identities=5% Similarity=0.031 Sum_probs=16.7
Q ss_pred EEEEecCCCCcchHhHHHHHH
Q 027134 93 LIVNVASQCGLTNSNYTELSQ 113 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~ 113 (227)
++.|+.+|||.|+.....|.+
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHH
Confidence 566889999999987766654
No 272
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.00 E-value=0.0023 Score=43.72 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=24.9
Q ss_pred EEEEEEec-----CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 91 LLLIVNVA-----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 91 ~vlv~F~a-----swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
.|+| |+. +|||+|+...+.|.++ ++.+..+++|.
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~ 56 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILE 56 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCC
Confidence 4555 555 9999999888877664 46777788773
No 273
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.96 E-value=0.0044 Score=46.64 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=34.8
Q ss_pred CCCEEEEEEecCCCCcchHhHHHH-HHHHHHHhcC-CcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKNQ-GLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l-~~l~~~~~~~-~~~vl~Vs~D 131 (227)
.++++|+.|+...||.|....+.+ ..+.++|.+. ++.++...+.
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 567889999999999999999998 5677888642 3777777664
No 274
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.90 E-value=0.016 Score=45.17 Aligned_cols=92 Identities=7% Similarity=0.038 Sum_probs=62.2
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCch
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAA 170 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 170 (227)
.+++.|...||+.|....+.++++.++++++ +.++.|..|. +.....+ +.+|+.
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~---------~~~~~~l-~~fgl~--------------- 186 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM---------KENGKVI-SFFKLK--------------- 186 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS---------GGGHHHH-HHTTCC---------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc---------HhHHHHH-HHcCCC---------------
Confidence 4555565789999999999999999999987 8888887652 1112223 233332
Q ss_pred hhHHHhhhcCCCCCCCccccceeEEEECCCCcEEEec-CCCCChhhHHHHHHHHhh
Q 027134 171 PLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY-APTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 171 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~I~~~~-~g~~~~~~l~~~i~~lL~ 225 (227)
-...|+..+++..+...+.. .+..+.+.+.+.++.+++
T Consensus 187 -----------------~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 187 -----------------ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp -----------------GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred -----------------cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhC
Confidence 01357888887655544443 356778889999988875
No 275
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.68 E-value=0.042 Score=42.03 Aligned_cols=39 Identities=10% Similarity=-0.048 Sum_probs=32.1
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
++.++|+ |+|+.+|+.+....|..+.+.+.+.|++++++
T Consensus 166 gv~g~Pt-~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~ 204 (208)
T 3kzq_A 166 GVNSYPS-LVLQINDAYFPIEVDYLSTEPTLKLIRERIIE 204 (208)
T ss_dssp TCCSSSE-EEEEETTEEEEECCCSSCSHHHHHHHHHHHHH
T ss_pred CCCcccE-EEEEECCEEEEeeCCCCCHHHHHHHHHHHHhc
Confidence 6889999 55566788877778888899999999999865
No 276
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.62 E-value=0.0047 Score=41.81 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=26.5
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
.-|+.|+.+|||.|++..+.|.++ ++.+..|.+|.
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~ 50 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDG 50 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTT
T ss_pred CCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCC
Confidence 344568999999999888888764 46677777773
No 277
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.26 E-value=0.0058 Score=42.12 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=23.4
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
|+.|+.+|||+|+...+.|.++ ++.+-.+.+|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~ 52 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELD 52 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEee
Confidence 4559999999999887777653 4555556665
No 278
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.10 E-value=0.022 Score=39.01 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=25.7
Q ss_pred CEEEEEEec----CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 90 KLLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 90 k~vlv~F~a----swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
..|+|++.+ +|||.|+...+.|.+ .++.+..|++|.
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~~ 54 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILE 54 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEESSS
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEECCC
Confidence 345554443 999999988777765 358888888873
No 279
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.99 E-value=0.009 Score=39.12 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=23.3
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPC 130 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~ 130 (227)
++.|+++|||+|+...+.|.+. ++.+..+++
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv 38 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK-------GVKYTDIDA 38 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH-------TCCEEEECS
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEEC
Confidence 5668999999999887777653 366666665
No 280
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.20 E-value=0.033 Score=39.49 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=22.7
Q ss_pred EEEEecCCCCcchHh-HHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~~~-~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
|+.|+.+|||+|+.. .+.|.++ ...++.+..|.+|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~----~~~~i~~~~vdvd 74 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQEL----NVPKSKALVLELD 74 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTS----CCCGGGEEEEEGG
T ss_pred EEEEECCCCCchHHHHHHHHHhc----CccCCCcEEEEcc
Confidence 566889999999977 5554432 2111666667766
No 281
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=95.08 E-value=0.038 Score=38.13 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=22.8
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
+.|+.+|||.|....+.|.++ |+.+-.+.+|
T Consensus 20 ~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd 50 (114)
T 3h8q_A 20 VIFSKSYCPHSTRVKELFSSL-------GVECNVLELD 50 (114)
T ss_dssp EEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEec
Confidence 338899999999877777653 4556666666
No 282
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=94.99 E-value=0.28 Score=37.29 Aligned_cols=39 Identities=5% Similarity=-0.126 Sum_probs=31.3
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
++.++|+.++. .+|+.+....|..+.+.+.+.|++++++
T Consensus 173 gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 211 (216)
T 2in3_A 173 GISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWLQQ 211 (216)
T ss_dssp TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred CCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHHHh
Confidence 78889997665 4688766778888899999999988753
No 283
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.07 E-value=0.24 Score=33.83 Aligned_cols=37 Identities=14% Similarity=0.220 Sum_probs=22.7
Q ss_pred EEEEecCCCCcchH--hHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 93 LIVNVASQCGLTNS--NYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 93 lv~F~aswC~~C~~--~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
|+.|..+|||.|.. ......++ ++.+++.+..|.++.
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~---L~~~gi~y~~vdI~~ 48 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRF---LEANKIEFEEVDITM 48 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHH---HHHTTCCEEEEETTT
T ss_pred EEEEEcCCCCCcccchhHHHHHHH---HHHcCCCEEEEECCC
Confidence 44577899999982 11122222 233568888888873
No 284
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=94.03 E-value=0.03 Score=45.03 Aligned_cols=39 Identities=10% Similarity=0.218 Sum_probs=30.9
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEe
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs 129 (227)
.|+.+|+.|+.+.||+|++..+.|++..+. -.+.++.+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~P 184 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVG 184 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEee
Confidence 578999999999999999999999976654 225666544
No 285
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=93.89 E-value=0.067 Score=40.22 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=35.6
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHH-hcCCcEEEEEeCC
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKY-KNQGLEILAFPCN 131 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~-~~~~~~vl~Vs~D 131 (227)
.++++|+.|..-.||.|++..+.+.++.+++ +++ ++++....-
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~-v~~v~r~~p 56 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDN-VTVRIRLQS 56 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTT-EEEEEEECC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCC-EEEEEEEcC
Confidence 4789999999999999999999998888876 433 888887754
No 286
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.86 E-value=0.98 Score=36.10 Aligned_cols=38 Identities=11% Similarity=0.138 Sum_probs=28.9
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
..|..|+..+||.|...-..|.++..++ ++..+.+.+|
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEE
Confidence 5666677999999999888888886653 4656677765
No 287
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=93.79 E-value=0.56 Score=38.63 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=33.1
Q ss_pred CEEEEEEecCCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeCC
Q 027134 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCN 131 (227)
Q Consensus 90 k~vlv~F~aswC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~D 131 (227)
+..++.|...||+.|....+.++++.+++++ +++.++.+..+
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~ 288 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD 288 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch
Confidence 4445558788999999999999999999985 34888887654
No 288
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=93.79 E-value=0.79 Score=32.01 Aligned_cols=37 Identities=11% Similarity=0.014 Sum_probs=28.0
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEe
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs 129 (227)
..+++||-||.+||.+| .+.+.++.+.+ + ++.+..++
T Consensus 38 ~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~ 74 (124)
T 2l4c_A 38 ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST 74 (124)
T ss_dssp TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC
T ss_pred cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC
Confidence 35799999999999999 56677777777 3 37765553
No 289
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=93.65 E-value=0.26 Score=31.83 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=23.1
Q ss_pred EEEEecC----CCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVAS----QCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~as----wC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
|+.|+.+ |||.|.+....|++ +|+.+-.++++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 3457789 99999877666654 45777777776
No 290
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.26 E-value=0.089 Score=37.61 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=24.1
Q ss_pred EEEEEEec----CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 91 LLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 91 ~vlv~F~a----swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
.|+|+.++ +|||.|+.....|.+ .++.+..|+++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECC
Confidence 45565555 899999977766654 35777777776
No 291
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=93.03 E-value=0.81 Score=38.08 Aligned_cols=42 Identities=7% Similarity=-0.001 Sum_probs=34.6
Q ss_pred CEEEEEEecCCCCcchHhHHHHHHHHHHHhcC-CcEEEEEeCC
Q 027134 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCN 131 (227)
Q Consensus 90 k~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~-~~~vl~Vs~D 131 (227)
+..++.|...+|+.|....+.++++.++|+++ .+.++.|..+
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~ 290 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPD 290 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGG
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCc
Confidence 45666688889988999999999999999985 4888888765
No 292
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=92.97 E-value=0.26 Score=34.90 Aligned_cols=53 Identities=9% Similarity=0.115 Sum_probs=37.2
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCcc
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (227)
+..|+.++|+.|++....|.+ .|+.+-.+.++. ++.+.+++++++ ...+.++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~----~~~~~~el~~~l-~~~~~~~~ 55 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFS----EPLSIDEIKQIL-RMTEDGTD 55 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTT----SCCCHHHHHHHH-HTCSSCGG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccC----CCccHHHHHHHH-HHcCCCHH
Confidence 345678999999987777765 467777777762 345778899888 45455443
No 293
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=92.85 E-value=0.28 Score=37.54 Aligned_cols=48 Identities=17% Similarity=-0.055 Sum_probs=36.5
Q ss_pred ecCCCCCCEEEEEEecCCCCcchHhHHHHHHHHH-HHh-cCCcEEEEEeC
Q 027134 83 DLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYD-KYK-NQGLEILAFPC 130 (227)
Q Consensus 83 ~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l~~-~~~-~~~~~vl~Vs~ 130 (227)
.+.+-.++++|+.|..-.||.|++..+.+....+ +|- ...+.++...+
T Consensus 9 ~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 9 LLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred eecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 3444568899999999999999999988766555 773 22388887775
No 294
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.84 E-value=0.32 Score=31.83 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=20.8
Q ss_pred EEEEecCCCCcc------hHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLT------NSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C------~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
|+.|..+|||.| ......| +.+|+.+.-+.++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L-------~~~~i~~~~~di~ 41 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRIL-------DGKRIQYQLVDIS 41 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHH-------HHTTCCCEEEETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHH-------HHCCCceEEEECC
Confidence 345778999999 3333333 2356777778877
No 295
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=92.70 E-value=0.25 Score=34.44 Aligned_cols=54 Identities=15% Similarity=0.200 Sum_probs=38.8
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccce
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIF 159 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (227)
..|..++|+.|++....|++ +|+.+-.+.+. .++.+.+++.+++ ...+.++.-+
T Consensus 6 ~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~~~~~l 59 (120)
T 3fz4_A 6 TFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIK----KNPPAASLIRNWL-ENSGLELKKF 59 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCEEEEETT----TSCCCHHHHHHHH-HHSCCCGGGG
T ss_pred EEEeCCCChHHHHHHHHHHH-------cCCceEEEEec----cCchhHHHHHHHH-HHcCCCHHHH
Confidence 34558899999988877764 45777777765 3466899999998 6667655433
No 296
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=92.62 E-value=0.52 Score=36.60 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=28.7
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHH
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKL 223 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~l 223 (227)
+|...|+.++++++|++..........+.+...|+++
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 8888999999999999998876555555566666554
No 297
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=92.46 E-value=0.34 Score=33.67 Aligned_cols=51 Identities=6% Similarity=0.087 Sum_probs=37.2
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCc
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEF 156 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
..|..++|+.|++....|++ +|+.+-.+.++ .++.+.+++++++ ...+.++
T Consensus 3 ~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~el~~~l-~~~~~~~ 53 (120)
T 3l78_A 3 TLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIM----TSPLSRDELLKIL-SYTENGT 53 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHH-HHCSSTH
T ss_pred EEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecc----cCCCcHHHHHHHH-hhcCCCH
Confidence 44668999999988777764 56777777776 3466899999998 4545554
No 298
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=91.68 E-value=0.11 Score=36.60 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=16.8
Q ss_pred EEEEecCCCCcchHhHHHHHH
Q 027134 93 LIVNVASQCGLTNSNYTELSQ 113 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~ 113 (227)
|+.|..+|||.|...-..|.+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLEN 36 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHH
Confidence 455788999999987777766
No 299
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=91.62 E-value=0.33 Score=33.19 Aligned_cols=35 Identities=11% Similarity=0.305 Sum_probs=24.1
Q ss_pred CCEEEEEEec-----CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 89 GKLLLIVNVA-----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 89 gk~vlv~F~a-----swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
...|+| |.- +|||.|.+....|.+ .|+.+..++++
T Consensus 15 ~~~Vvl-f~kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~ 54 (111)
T 3zyw_A 15 AAPCML-FMKGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIF 54 (111)
T ss_dssp SSSEEE-EESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred cCCEEE-EEecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECc
Confidence 345555 555 999999987777664 35666677776
No 300
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=91.32 E-value=0.27 Score=34.25 Aligned_cols=53 Identities=8% Similarity=0.015 Sum_probs=37.9
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccc
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPI 158 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (227)
..|..++|+.|++....|++ +|+.+-.+.+. .++.+.+++.+++ ...+.++.-
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~~~~~ 59 (120)
T 3gkx_A 7 LFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIV----DDNPTVEELKAWI-PLSGLPVKK 59 (120)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT----TTCCCHHHHHHHH-HHHTSCGGG
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCceEEEecc----cCcCCHHHHHHHH-HHcCCCHHH
Confidence 34568999999988777764 46766667665 3466899999998 555665443
No 301
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=90.16 E-value=1.2 Score=30.81 Aligned_cols=35 Identities=14% Similarity=0.375 Sum_probs=22.5
Q ss_pred CEEEEEEec----CCCCcchHhHHHHHHHHHHHhcCCcE---EEEEeCC
Q 027134 90 KLLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGLE---ILAFPCN 131 (227)
Q Consensus 90 k~vlv~F~a----swC~~C~~~~~~l~~l~~~~~~~~~~---vl~Vs~D 131 (227)
..|+|+--. +|||.|......|++. |+. +..++++
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~ 57 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVL 57 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECT
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEec
Confidence 345554434 3999999887777663 344 6666666
No 302
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=89.52 E-value=0.28 Score=33.75 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=33.4
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
..|..++|+.|++....|++ +|+.+-.+.++. ++.+.+++++++ ++.|
T Consensus 3 ~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~----~~~~~~~l~~~~-~~~g 50 (114)
T 1rw1_A 3 VLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKA----VGIDREHLRRWC-AEHG 50 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHH----HCCCHHHHHHHH-HHHC
T ss_pred EEEECCCChHHHHHHHHHHH-------CCCceEEEeecC----CCCCHHHHHHHH-HhCC
Confidence 44668999999987777765 457776776652 244678888888 4445
No 303
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=89.09 E-value=1 Score=31.17 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=22.2
Q ss_pred CEEEEEEec----CCCCcchHhHHHHHHHHHHHhcCCc-EEEEEeCC
Q 027134 90 KLLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGL-EILAFPCN 131 (227)
Q Consensus 90 k~vlv~F~a----swC~~C~~~~~~l~~l~~~~~~~~~-~vl~Vs~D 131 (227)
..|+|+--. +|||.|......|++ .++ .+-.+.++
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~ 59 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVL 59 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESS
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcC
Confidence 345553333 399999977666664 346 36677776
No 304
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=88.85 E-value=0.77 Score=31.07 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=23.3
Q ss_pred CCEEEEEEec----CCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 89 GKLLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 89 gk~vlv~F~a----swC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
...|+|+-.. +|||.|++....|.+ .|+.+-.++++
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~ 56 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNIL 56 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 3445553334 399999987777665 35666677776
No 305
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=87.73 E-value=0.72 Score=32.07 Aligned_cols=49 Identities=12% Similarity=0.251 Sum_probs=36.2
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCC
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKA 154 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
..|..++|+.|++....|++ +|+.+-.+.+. .++.+.+++++++ ...+.
T Consensus 8 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~ 56 (121)
T 3rdw_A 8 TIYHNPRCSKSRETLALVEQ-------QGITPQVVLYL----ETPPSVDKLKELL-QQLGF 56 (121)
T ss_dssp EEECCTTCHHHHHHHHHHHT-------TTCCCEEECTT----TSCCCHHHHHHHH-HHTTC
T ss_pred EEEECCCCHHHHHHHHHHHH-------cCCCcEEEeec----cCCCcHHHHHHHH-HhcCC
Confidence 44568899999988776653 56777777765 3566899999998 56665
No 306
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=87.25 E-value=0.45 Score=32.97 Aligned_cols=49 Identities=14% Similarity=0.228 Sum_probs=33.6
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCC
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+..|..++|+.|++....|++ +|+.+-.+.++. ++.+.+++++++ ++.+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~----~~~~~~~l~~~~-~~~g 55 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKK----EGLDAETLDRFL-KTVP 55 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHH----HCCCHHHHHHHH-HHSC
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeC----CCCCHHHHHHHH-HHcC
Confidence 344668999999988777775 346666666641 234678888888 5555
No 307
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=87.23 E-value=0.76 Score=32.90 Aligned_cols=49 Identities=8% Similarity=0.184 Sum_probs=35.5
Q ss_pred EEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCC
Q 027134 95 VNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (227)
Q Consensus 95 ~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
.|..++|+.|++....|++ +|+.+-.+.+. .++.+.+++.+++ ...+.+
T Consensus 6 iY~~p~C~~crkak~~L~~-------~gi~~~~idi~----~~~~~~~eL~~~~-~~~g~p 54 (141)
T 1s3c_A 6 IYHNPASGTSRNTLEMIRN-------SGTEPTIILYL----ENPPSRDELVKLI-ADMGIS 54 (141)
T ss_dssp EECCTTCHHHHHHHHHHHH-------TTCCCEEECTT----TSCCCHHHHHHHH-HHHTSC
T ss_pred EEECCCChHHHHHHHHHHH-------cCCCEEEEECC----CCCccHHHHHHHh-cccCCC
Confidence 4568899999987777665 56777777776 3456888999888 444554
No 308
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=87.12 E-value=1.6 Score=33.64 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=23.7
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
..++.|+.+|||.|++....|++. |+.+-.+.++
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~ 203 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILG 203 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred ceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECC
Confidence 345567889999999877766642 4566666665
No 309
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=87.02 E-value=7.9 Score=29.97 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=23.9
Q ss_pred ceeEEEECCCCcEEEecCCCCChhh--HHHHHHHHhh
Q 027134 191 NFSKFLVDKEGNVVERYAPTTSPLS--IEKDIKKLLE 225 (227)
Q Consensus 191 ~P~~~lid~~G~I~~~~~g~~~~~~--l~~~i~~lL~ 225 (227)
.|...++|.+|. .+.+.+..+.+. +.+.++.++.
T Consensus 195 ~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 195 IPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp SCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHHH
T ss_pred CCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHHC
Confidence 578888877655 455556666677 8888888764
No 310
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=87.01 E-value=3.7 Score=28.52 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=23.1
Q ss_pred EEEEecCCCCcch--HhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 93 LIVNVASQCGLTN--SNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 93 lv~F~aswC~~C~--~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
|+.|..+.||.|. +.-....++ ++.+|+.+--+.++
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~l---L~~kgV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGF---LEANKIGFEEKDIA 39 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHH---HHHTTCCEEEEECT
T ss_pred EEEEecCCCCCccchHHHHHHHHH---HHHCCCceEEEECC
Confidence 4556699999994 222233333 34467888888887
No 311
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=83.87 E-value=1.2 Score=30.57 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=29.2
Q ss_pred CEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 90 k~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
|.++|-|.-+.|+.|......|.++ .++ ..++.|++=.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----ede-Y~ilrVNIlS 39 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KSE-YDILHVDILS 39 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TTT-EEEEEEECCC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hcc-ccEEEEEeee
Confidence 6789999999999999777777444 443 6788887754
No 312
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=80.56 E-value=13 Score=26.35 Aligned_cols=78 Identities=10% Similarity=0.076 Sum_probs=45.5
Q ss_pred hHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCccceeeeccCCCCchhhHHHhhhcCCCCC
Q 027134 105 NSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLF 184 (227)
Q Consensus 105 ~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 184 (227)
....+.++++.++|+++ +.++.|..+. . .....+ +.+|++-
T Consensus 48 ~~~~~~~~~vAk~fkgk-i~Fv~vd~~~--------~-~~~~~l-~~fGl~~---------------------------- 88 (147)
T 3bj5_A 48 DGKLSNFKTAAESFKGK-ILFAFIDSDH--------T-DNQRIL-EFFGLKK---------------------------- 88 (147)
T ss_dssp HHHHHHHHHHHHTTTTT-CEEEEECTTC--------G-GGHHHH-HHTTCCG----------------------------
T ss_pred HHHHHHHHHHHHHcCCc-eEEEEEecch--------H-hHHHHH-HHcCCCc----------------------------
Confidence 34567888899999876 7777776531 1 111222 2333321
Q ss_pred CCccccceeEEEECC-CCcEEEecC-CCCChhhHHHHHHHHhh
Q 027134 185 GDSIKWNFSKFLVDK-EGNVVERYA-PTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 185 ~~~i~~~P~~~lid~-~G~I~~~~~-g~~~~~~l~~~i~~lL~ 225 (227)
.-.|+..+++. .....+... +..+.+.+.+.++.+++
T Consensus 89 ----~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 89 ----EECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 127 (147)
T ss_dssp ----GGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHT
T ss_pred ----ccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHc
Confidence 01577777764 222234433 66678889988888774
No 313
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=80.30 E-value=0.81 Score=31.71 Aligned_cols=50 Identities=10% Similarity=0.234 Sum_probs=34.7
Q ss_pred EEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCC
Q 027134 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (227)
Q Consensus 94 v~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
..|..++|+.|++....|++ +|+.+-.+.+. .++.+.+++++++ +..+.+
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~t~~eL~~~l-~~~g~~ 56 (119)
T 3f0i_A 7 VIYHNPKCSKSRETLALLEN-------QGIAPQVIKYL----ETSPSVEELKRLY-QQLGLN 56 (119)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECHH----HHCCCHHHHHHHH-HHHTCS
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCceEEEEec----cCcCcHHHHHHHH-HHcCCc
Confidence 34558899999988877764 45655555543 2356889999998 555655
No 314
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=77.33 E-value=2.4 Score=32.24 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=27.4
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
+|.++|+.+| +|+. ..|..+.+.+++.|++++++
T Consensus 165 GV~GtPtfvv---ng~~---~~G~~~~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 165 NVSGTPSFMI---DGIL---LAGTHDWASLRPQILARLNE 198 (205)
T ss_dssp CCCSSSEEEE---TTEE---CTTCCSHHHHHHHHHHHHTC
T ss_pred CCccCCEEEE---CCEE---EeCCCCHHHHHHHHHHHhhc
Confidence 7889999655 5664 46888899999999998875
No 315
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=71.91 E-value=20 Score=27.13 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=26.3
Q ss_pred CCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEE
Q 027134 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAF 128 (227)
Q Consensus 88 ~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~V 128 (227)
..+++||-|+++|| ....+.+.++.+.++ ++.+...
T Consensus 26 ~~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t 61 (227)
T 4f9z_D 26 ATEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGIS 61 (227)
T ss_dssp TSSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEEE
T ss_pred cCCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEEE
Confidence 35789999999985 566778888888774 3666554
No 316
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=69.79 E-value=31 Score=26.52 Aligned_cols=33 Identities=6% Similarity=0.078 Sum_probs=21.4
Q ss_pred eeEEEECCCCcEEEecC-CCCChhhHHHHHHHHhh
Q 027134 192 FSKFLVDKEGNVVERYA-PTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 192 P~~~lid~~G~I~~~~~-g~~~~~~l~~~i~~lL~ 225 (227)
|..+++|.+++ .+... +..+.+.+.+.++.+++
T Consensus 195 p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 195 VNAAILDESGK-KFAMEPEEFDSDALREFVMAFKK 228 (250)
T ss_dssp CEEEEECTTSC-EEECCCCSCCHHHHHHHHHHHHT
T ss_pred cEEEEEcCCCc-eecCCcccCCHHHHHHHHHHHHC
Confidence 45667775553 34433 45678889998888764
No 317
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=67.60 E-value=33 Score=28.21 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=24.3
Q ss_pred CCEEEEEEecCCCCcc-hHhHHHHHHHHHHHhcCCcEEEEEeCC
Q 027134 89 GKLLLIVNVASQCGLT-NSNYTELSQLYDKYKNQGLEILAFPCN 131 (227)
Q Consensus 89 gk~vlv~F~aswC~~C-~~~~~~l~~l~~~~~~~~~~vl~Vs~D 131 (227)
+++++|.|+..+|..+ ......+.+...++++ .+.++.|..+
T Consensus 236 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~ 278 (382)
T 2r2j_A 236 GLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCD 278 (382)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETT
T ss_pred CCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchH
Confidence 5677777777776533 2233445554545544 3777777654
No 318
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=65.44 E-value=0.83 Score=23.04 Aligned_cols=21 Identities=10% Similarity=0.094 Sum_probs=17.1
Q ss_pred CCCcchHhHHHHHHHHHHHhc
Q 027134 100 QCGLTNSNYTELSQLYDKYKN 120 (227)
Q Consensus 100 wC~~C~~~~~~l~~l~~~~~~ 120 (227)
-||.|+..+|.++.+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 499999999998887766654
No 319
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=62.80 E-value=8.1 Score=29.88 Aligned_cols=35 Identities=0% Similarity=-0.146 Sum_probs=26.1
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
++.++|+.+ | +|+. ...|..+.+.+.+.|++++++
T Consensus 180 Gv~GvPtfv-v--~g~~--~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 180 GATGVPFFV-L--DRAY--GVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp TCCSSSEEE-E--TTTE--EEESSCCHHHHHHHHHHHHHT
T ss_pred CCCeeCeEE-E--CCcE--eecCCCCHHHHHHHHHHHHhh
Confidence 688899955 5 4552 335777899999999998864
No 320
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=62.02 E-value=21 Score=24.45 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=19.5
Q ss_pred CEEEEEEec----CCCCcchHhHHHHHHHHHHHhcCCc-EEEEEeCC
Q 027134 90 KLLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGL-EILAFPCN 131 (227)
Q Consensus 90 k~vlv~F~a----swC~~C~~~~~~l~~l~~~~~~~~~-~vl~Vs~D 131 (227)
.+|+|+-=. +.||.|.+....|.+ .++ .+..+.++
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL~~-------~gv~~~~~~~v~ 59 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVL 59 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCSCEEEETT
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHHHH-------hCCcCeEeeccc
Confidence 355553323 468888766655543 334 35566665
No 321
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=60.38 E-value=3.3 Score=34.47 Aligned_cols=16 Identities=13% Similarity=0.343 Sum_probs=11.7
Q ss_pred EEEecCCCCcchHhHH
Q 027134 94 IVNVASQCGLTNSNYT 109 (227)
Q Consensus 94 v~F~aswC~~C~~~~~ 109 (227)
+.|..+|||.|.+...
T Consensus 264 vVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 264 FVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEECTTCHHHHHHHH
T ss_pred EEEEcCCCcchHHHHH
Confidence 3467799999986554
No 322
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=57.81 E-value=15 Score=25.31 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=36.1
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCC
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+|.+|||++-.-. . . ..+.++.+.+...|+.+++|.-. +.+.+++.+ ...+++
T Consensus 45 F~~aPVVlDl~~l~-~--~---~dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a-~~~GLp 98 (120)
T 3ghf_A 45 LKHAPVVINVSGLE-S--P---VNWPELHKIVTSTGLRIIGVSGC--------KDASLKVEI-DRMGLP 98 (120)
T ss_dssp HTTCEEEEEEEECC-S--S---CCHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHH-HHHTCC
T ss_pred hCCCcEEEEccccC-C--h---HHHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHH-HHCCCC
Confidence 58999999996432 1 1 34677777778889999999843 335566666 343543
No 323
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=53.45 E-value=14 Score=25.72 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=25.6
Q ss_pred ceeEEEECCCCcEEEec-CCCCChhhHHHHHHHHhh
Q 027134 191 NFSKFLVDKEGNVVERY-APTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 191 ~P~~~lid~~G~I~~~~-~g~~~~~~l~~~i~~lL~ 225 (227)
.|...++|.+|+++.+. +..-+-+++.+.|.+-|+
T Consensus 62 ~P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~ekL~ 97 (126)
T 2a4h_A 62 DPVVKLLDASGKVQETLSITKWNTDTVEEFFETHLA 97 (126)
T ss_dssp CCEEEECCSSSCCSEEEECSSSSCSHHHHHHHHHSC
T ss_pred CCEEEEecCCCCEeeEeccccCCHHHHHHHHHHHhh
Confidence 58999999999977663 344456678888877654
No 324
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=53.22 E-value=58 Score=28.29 Aligned_cols=23 Identities=17% Similarity=0.066 Sum_probs=18.9
Q ss_pred ccccceeEEEECCCCcEEEecCC
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAP 209 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g 209 (227)
+|...|+.++++++|++....+.
T Consensus 202 gV~~~Pslvl~~~nGk~~~~~v~ 224 (519)
T 3t58_A 202 GVTDFPSCYLLLRNGSVSRVPVL 224 (519)
T ss_dssp TCCCSSEEEEEETTSCEEECCCS
T ss_pred CCCCCCeEEEEeCCCceeecccc
Confidence 78889999999999998765443
No 325
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=53.20 E-value=1.8 Score=22.87 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=14.2
Q ss_pred CCCcchHhHHHHHHHHHHHh
Q 027134 100 QCGLTNSNYTELSQLYDKYK 119 (227)
Q Consensus 100 wC~~C~~~~~~l~~l~~~~~ 119 (227)
-||.|++.+.....|.+-|.
T Consensus 7 iCP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHHHH
Confidence 39999888776666665554
No 326
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=52.18 E-value=51 Score=22.13 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=26.4
Q ss_pred cCCCC--cc----hHhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 98 ASQCG--LT----NSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 98 aswC~--~C----~~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
|-.|+ .| -.++-.+....+.++++|+.|--.++.+
T Consensus 13 amCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~ 53 (106)
T 3ktb_A 13 AMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRD 53 (106)
T ss_dssp SCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred hhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 66777 45 3566777777888888899999998863
No 327
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=49.68 E-value=41 Score=23.04 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=28.8
Q ss_pred eeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 192 FSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
|...|.+.+|+||....+..+....++-|+.+.+.
T Consensus 66 ~yF~Lka~NgqvIg~Se~Y~s~~~~~~gI~sVk~n 100 (118)
T 2k49_A 66 PYFNLKAANHQIIGTSQMYSSTAARDNGIKSVMEN 100 (118)
T ss_dssp EEEEEECTTCCEEEEBCCCSSHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEcCCcCCHHHHHHHHHHHHHh
Confidence 56788899999999988877888888888877643
No 328
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=48.47 E-value=96 Score=24.26 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=35.9
Q ss_pred ccCCeEEecCCCCeeecCCCC-------CCEEEEEEecCCCCcchHhHH-HHHHHHH---------HHhcCCcEEEEEeC
Q 027134 68 SVHDFSVKDAKGQDVDLSIYK-------GKLLLIVNVASQCGLTNSNYT-ELSQLYD---------KYKNQGLEILAFPC 130 (227)
Q Consensus 68 ~~p~f~l~~~~G~~v~l~~~~-------gk~vlv~F~aswC~~C~~~~~-~l~~l~~---------~~~~~~~~vl~Vs~ 130 (227)
..|-|.+.|.+|..+-.+.-+ ++.|...|+ ++.... .|.++.+ ++. .+++|..|++
T Consensus 13 ~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~-~~~kV~~vsL 85 (252)
T 4ev1_A 13 SVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIV-KSLQVTAVPL 85 (252)
T ss_dssp TSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHH-TTCEEEEEEH
T ss_pred CCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhc-cCceEEEeeH
Confidence 478899999999987665433 455555443 343333 3444554 322 3599999987
Q ss_pred C
Q 027134 131 N 131 (227)
Q Consensus 131 D 131 (227)
+
T Consensus 86 ~ 86 (252)
T 4ev1_A 86 G 86 (252)
T ss_dssp H
T ss_pred H
Confidence 6
No 329
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=46.57 E-value=65 Score=21.76 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=21.0
Q ss_pred cCCCC--cch----HhHHHHHHHHHHHhcCCcEEEEEeCCC
Q 027134 98 ASQCG--LTN----SNYTELSQLYDKYKNQGLEILAFPCNQ 132 (227)
Q Consensus 98 aswC~--~C~----~~~~~l~~l~~~~~~~~~~vl~Vs~D~ 132 (227)
|-.|+ .|- .++-.+....+.++++|+.|--.|+.+
T Consensus 10 amCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~ 50 (110)
T 3kgk_A 10 AMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLAQ 50 (110)
T ss_dssp C-------------CHHHHHHHHHHHHHHHTCCEEEEETTT
T ss_pred hhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEcccc
Confidence 55666 453 355666677777788889999999863
No 330
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=46.09 E-value=20 Score=31.53 Aligned_cols=55 Identities=13% Similarity=0.181 Sum_probs=30.2
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHh-hCCCCccce
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACT-RFKAEFPIF 159 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 159 (227)
++.|..+|||.|...-..|++ .++.+-.+.+|. .+...++++.+.+ ....++|.+
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~-------~~i~~~~~dv~~-----~~~~~~~~~~l~~~~g~~tvP~v 75 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE-------AKIKHATIELDQ-----LSNGSAIQKCLASFSKIETVPQM 75 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEGGG-----STTHHHHHHHTHHHHSCCCSCEE
T ss_pred EEEEECCCChhHHHHHHHHHH-------CCCCcEEEEccc-----CcchHHHHHHHHHHhCCceeCEE
Confidence 455788999999976666654 234444555542 0123444444322 224567765
No 331
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=45.96 E-value=47 Score=20.00 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=27.8
Q ss_pred eeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 192 FSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
...-|.+.||+|+....|..+.....+.|+.+-+
T Consensus 13 frfrLka~NGevI~sSe~Y~sk~~a~~gI~sVk~ 46 (64)
T 3bid_A 13 YRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLKS 46 (64)
T ss_dssp EEEEEECTTSCEEEECCCBSCHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCEEEECCCcCCHHHHHHHHHHHHH
Confidence 3678899999999988888888888888877653
No 332
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=45.19 E-value=1.3e+02 Score=24.88 Aligned_cols=44 Identities=16% Similarity=0.329 Sum_probs=34.0
Q ss_pred chHhHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCCCCHHHHHHHHHhhCCCCc
Q 027134 104 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEF 156 (227)
Q Consensus 104 C~~~~~~l~~l~~~~~~~~~~vl~Vs~D~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
+.+..|.+.++.+.++.+|+.++-||-. ..+-++.++ ++.++.|
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia-~~lg~~y 262 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFA-TDTNNNY 262 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHH-HCTTSSC
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHH-HHhCccc
Confidence 3456899999999999999999999965 566666766 5655554
No 333
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=44.78 E-value=19 Score=26.66 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=23.5
Q ss_pred EEEEecCCCCcchHhHHHHHHHHHHHh
Q 027134 93 LIVNVASQCGLTNSNYTELSQLYDKYK 119 (227)
Q Consensus 93 lv~F~aswC~~C~~~~~~l~~l~~~~~ 119 (227)
|..|+..-||.|....+.|.++.++++
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 455668899999999999999999985
No 334
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=44.19 E-value=39 Score=25.90 Aligned_cols=42 Identities=10% Similarity=0.237 Sum_probs=30.0
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhc-CCcEEEEEeC
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPC 130 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~-~~~~vl~Vs~ 130 (227)
||..|-.|+..-||.|-.-.+.|.++.+++.+ .+++|.-..+
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~ 43 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSF 43 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEEC
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEe
Confidence 45554444477999999999999999888763 3566665554
No 335
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=44.04 E-value=12 Score=17.91 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=12.8
Q ss_pred eEEEECCCCcEEEec
Q 027134 193 SKFLVDKEGNVVERY 207 (227)
Q Consensus 193 ~~~lid~~G~I~~~~ 207 (227)
++.|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 468999999999875
No 336
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=43.71 E-value=1.1e+02 Score=23.37 Aligned_cols=36 Identities=3% Similarity=0.133 Sum_probs=24.9
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEE
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAF 128 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~V 128 (227)
.++++|-|+.++| ....+.+.++.+.+++. +.+..+
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~-~~F~~t 60 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED-YKFHHT 60 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC-cEEEEE
Confidence 4577788888774 45677778888887654 666554
No 337
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=42.75 E-value=1.1e+02 Score=23.26 Aligned_cols=37 Identities=3% Similarity=-0.008 Sum_probs=25.9
Q ss_pred CCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEe
Q 027134 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (227)
Q Consensus 89 gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs 129 (227)
.++++|-|+.+| |......+.++.+.++++ +.+..++
T Consensus 24 ~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~-~~F~~~~ 60 (252)
T 2h8l_A 24 KDASIVGFFDDS---FSEAHSEFLKAASNLRDN-YRFAHTN 60 (252)
T ss_dssp SSCEEEEEESCT---TSHHHHHHHHHHHHTTTT-SCEEEEC
T ss_pred CCeEEEEEECCC---CChHHHHHHHHHHhcccC-cEEEEEC
Confidence 456778788887 455677888888888664 6665553
No 338
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=42.60 E-value=12 Score=27.54 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=21.0
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHH
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 220 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i 220 (227)
+|.++|+. +| +|+.+....|..+.+++.+.|
T Consensus 151 GV~gtPtf-~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 151 GIHVSPTF-MI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp TCCSSSEE-EE--TTEECTTCCTTSCHHHHHHHH
T ss_pred CCCccCEE-EE--CCEEccCCCCCCCHHHHHHHh
Confidence 78899995 55 577754455666677776654
No 339
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=41.26 E-value=25 Score=24.51 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=21.4
Q ss_pred ceeEEEECCCCcEEEe-cCCCCChhhHHHHHHH
Q 027134 191 NFSKFLVDKEGNVVER-YAPTTSPLSIEKDIKK 222 (227)
Q Consensus 191 ~P~~~lid~~G~I~~~-~~g~~~~~~l~~~i~~ 222 (227)
.|..+++|.+|+++.+ .+...+.+++.+.|++
T Consensus 56 ~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 56 DPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 5899999999997665 3333345556666554
No 340
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=39.17 E-value=18 Score=26.76 Aligned_cols=32 Identities=9% Similarity=0.116 Sum_probs=22.7
Q ss_pred ccccceeEEEECCCCcEEEecCCCCChhhHHHHHHHHh
Q 027134 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 224 (227)
Q Consensus 187 ~i~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL 224 (227)
++.++|+.+ | +|+. +.|..+.+.+++.|++..
T Consensus 164 Gv~G~Ptfv-i--~g~~---~~G~~~~~~l~~~l~~~~ 195 (203)
T 2imf_A 164 KVFGVPTMF-L--GDEM---WWGNDRLFMLESAMGRLC 195 (203)
T ss_dssp TCCSSSEEE-E--TTEE---EESGGGHHHHHHHHHHHH
T ss_pred CCCcCCEEE-E--CCEE---EECCCCHHHHHHHHhccc
Confidence 788899954 4 4653 457667778888887765
No 341
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=38.07 E-value=65 Score=22.44 Aligned_cols=35 Identities=14% Similarity=0.075 Sum_probs=28.2
Q ss_pred eeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 192 FSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
+...|.+.+|+|+....+..+....++.|+.+.+.
T Consensus 82 ~~f~Lka~NgqvIa~Se~Y~ska~a~~gI~sVk~n 116 (130)
T 2k8e_A 82 FYFNLKAANHQIIGSSQMYATAQSRETGIASVKAN 116 (130)
T ss_dssp EEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHHH
Confidence 46789999999999887777787888888877643
No 342
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=37.29 E-value=47 Score=21.43 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=22.7
Q ss_pred CCCeeecCCCCCCEEEEEEecCCCCcchHhHHHHH
Q 027134 78 KGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELS 112 (227)
Q Consensus 78 ~G~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~ 112 (227)
+|-.+.+-++.+..|.|.|-.. |..|....-.|+
T Consensus 26 dGGdvelv~v~~g~V~V~L~Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLHGA-CGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEESS-CCSSCHHHHHHH
T ss_pred cCCeEEEEEEECCEEEEEEeec-CCCCcchHHHHH
Confidence 5667777777777888888644 555655555444
No 343
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=32.32 E-value=2.7e+02 Score=24.77 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=29.8
Q ss_pred ccCCCccCCeEEec-CCCCeeecCC-C--CCCEEEEEEecC
Q 027134 63 SQSKTSVHDFSVKD-AKGQDVDLSI-Y--KGKLLLIVNVAS 99 (227)
Q Consensus 63 ~~~g~~~p~f~l~~-~~G~~v~l~~-~--~gk~vlv~F~as 99 (227)
..+|..+|++.+.. .+|+.+++.+ + .|+++||.|-..
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~ 519 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGK 519 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEEC
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCC
Confidence 46899999999976 4898888888 4 378999988643
No 344
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=32.21 E-value=3 Score=20.26 Aligned_cols=11 Identities=18% Similarity=0.380 Sum_probs=8.5
Q ss_pred CCCcchHhHHH
Q 027134 100 QCGLTNSNYTE 110 (227)
Q Consensus 100 wC~~C~~~~~~ 110 (227)
-||.|...||.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999887763
No 345
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=31.68 E-value=36 Score=25.65 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=26.3
Q ss_pred EEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEEEe
Q 027134 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (227)
Q Consensus 91 ~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~Vs 129 (227)
..|..|+..-||.|-...+.|.++.+++ +++|.-..
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~p 41 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLRP 41 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 4556666889999999999999987665 35554443
No 346
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=30.46 E-value=72 Score=20.34 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=27.1
Q ss_pred eeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 192 FSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
+...|...||+|+....+..+....++-|+.+-+
T Consensus 35 ~rFrLkA~NGevIasSe~Y~sk~~a~~GIeSVk~ 68 (83)
T 2k7i_A 35 YRFRFKASNGETMFSSEGYKAKASAIHAIESIKR 68 (83)
T ss_dssp EEEEECCTTSCCCEEBCCSSSHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHH
Confidence 4678888999999988888887777777776653
No 347
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=29.85 E-value=1.5e+02 Score=25.20 Aligned_cols=43 Identities=19% Similarity=0.228 Sum_probs=23.7
Q ss_pred CcEEEEEeCCCCCC-----CCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 122 GLEILAFPCNQFGA-----QEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 122 ~~~vl~Vs~D~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
|++++.++.+..+. +.+...+.+++.+ ++.+.++-+. .|.+++
T Consensus 218 G~~v~~l~~~pDg~f~n~~~~~~~~~~l~~~v-~~~~adlgia--~DgDaD 265 (469)
T 3pdk_A 218 EADISTMGTSPNGMNINDGVGSTHPEVLAELV-KEKGADIGLA--FDGDGD 265 (469)
T ss_dssp TCEEEEESCCCCSSCTTSSCSTTSTHHHHHHH-HHHTCSEEEE--ECTTSS
T ss_pred CCEEEEECCCcCCCCCCCCCCCCCHHHHHHHH-HhcCCcEEEE--ECCCCC
Confidence 56777776543221 2334566777777 4556665555 455544
No 348
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=28.09 E-value=48 Score=22.51 Aligned_cols=54 Identities=9% Similarity=0.168 Sum_probs=26.2
Q ss_pred CCCCEEEEEEecCCCCcchHhHHHHHHHHHHHhcCCcEEEE--EeCCCCCCCCCCCHHHHHHHH
Q 027134 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILA--FPCNQFGAQEPGDNEQIQEFA 148 (227)
Q Consensus 87 ~~gk~vlv~F~aswC~~C~~~~~~l~~l~~~~~~~~~~vl~--Vs~D~~~~~~~~~~~~~~~~~ 148 (227)
++||++.+.-.+.|. .|. .+..+.+.+++.|..+++ +.++ ++++.+. +++++|.
T Consensus 77 l~~k~~~~f~t~g~~-~~~----a~~~l~~~l~~~G~~~v~~~~~~~--~~p~~~d-~~~~~~~ 132 (138)
T 5nul_A 77 ISGKKVALFGSYGWG-DGK----WMRDFEERMNGYGCVVVETPLIVQ--NEPDEAE-QDCIEFG 132 (138)
T ss_dssp CTTCEEEEEEEESSS-CSH----HHHHHHHHHHHTTCEECSCCEEEE--SSCGGGH-HHHHHHH
T ss_pred cCCCEEEEEEecCCC-CCh----HHHHHHHHHHHCCCEEECCceEEe--cCCCHHH-HHHHHHH
Confidence 567776665545554 342 234444445555555552 3333 2233334 5555554
No 349
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=28.03 E-value=72 Score=19.77 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=24.2
Q ss_pred CC-CeeecCCCCCCEEEEEEecCCCCcchHhHHHHHHH
Q 027134 78 KG-QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQL 114 (227)
Q Consensus 78 ~G-~~v~l~~~~gk~vlv~F~aswC~~C~~~~~~l~~l 114 (227)
+| -.+.+-++.+..|.|.+-.. |..|...-..+++.
T Consensus 23 dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~ 59 (74)
T 1th5_A 23 TGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKK 59 (74)
T ss_dssp TTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHH
T ss_pred cCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHH
Confidence 45 66777777777888888755 88895444455543
No 350
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=27.37 E-value=47 Score=20.59 Aligned_cols=35 Identities=6% Similarity=0.168 Sum_probs=22.9
Q ss_pred CCCCCEEEE-EEecCCCCcc------hHhHHHHHHHHHHHhc
Q 027134 86 IYKGKLLLI-VNVASQCGLT------NSNYTELSQLYDKYKN 120 (227)
Q Consensus 86 ~~~gk~vlv-~F~aswC~~C------~~~~~~l~~l~~~~~~ 120 (227)
+++|+.++| +.-+.+|+.| ..++..+.++...++.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 468887766 4468888877 3455566666666654
No 351
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=26.51 E-value=1.9e+02 Score=24.44 Aligned_cols=43 Identities=21% Similarity=0.269 Sum_probs=22.7
Q ss_pred CcEEEEEeCCCCC-----CCCCCCHHHHHHHHHhhCCCCccceeeeccCCC
Q 027134 122 GLEILAFPCNQFG-----AQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (227)
Q Consensus 122 ~~~vl~Vs~D~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (227)
|++++.++.+..+ .+.+...+.+++.+ ++.+.++-+. .|.+++
T Consensus 196 G~~v~~~~~~pDg~f~n~~~~~~~~~~l~~~v-~~~~adlgia--~DgDaD 243 (443)
T 3i3w_A 196 GINYVSIASNPDGLNINVGCGATCVSNIKKAV-KEQKADLGIS--LDGDAD 243 (443)
T ss_dssp TCEEEESSCCCCSSCTTTTCSTTCHHHHHHHH-HHHTCSEEEE--ECTTSC
T ss_pred CCEEEEECCccCCCCCCCCCCCCCHHHHHHHH-HhcCCcEEEE--ECCCCc
Confidence 5667666544221 12334566777776 4556665555 454444
No 352
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=25.92 E-value=3.4e+02 Score=23.88 Aligned_cols=43 Identities=16% Similarity=0.050 Sum_probs=32.1
Q ss_pred ccCCCccCCeEEec-CCCCeeecCC-C--CCCEEEEEEecCCCCcch
Q 027134 63 SQSKTSVHDFSVKD-AKGQDVDLSI-Y--KGKLLLIVNVASQCGLTN 105 (227)
Q Consensus 63 ~~~g~~~p~f~l~~-~~G~~v~l~~-~--~gk~vlv~F~aswC~~C~ 105 (227)
..+|..+|+..+.. .+|+.+++.+ + .|+.+|+.|-....+.+.
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~~~~~~ 513 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQNDLAQP 513 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTTTTTCT
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCCCchhh
Confidence 46899999999976 5899988887 4 378999998544333343
No 353
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=22.62 E-value=47 Score=23.39 Aligned_cols=16 Identities=31% Similarity=0.382 Sum_probs=13.6
Q ss_pred eeEEEECCCCcEEEec
Q 027134 192 FSKFLVDKEGNVVERY 207 (227)
Q Consensus 192 P~~~lid~~G~I~~~~ 207 (227)
|..||+|.+|+|+...
T Consensus 56 ~r~~l~d~eG~Il~~~ 71 (138)
T 3v67_A 56 PRVFFSDYNGNVLTTD 71 (138)
T ss_dssp CEEEEECTTSCEECCC
T ss_pred ccEEEEcCCCCEecCC
Confidence 5789999999998653
No 354
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=22.19 E-value=47 Score=22.07 Aligned_cols=15 Identities=27% Similarity=0.410 Sum_probs=13.4
Q ss_pred eEEEECCCCcEEEec
Q 027134 193 SKFLVDKEGNVVERY 207 (227)
Q Consensus 193 ~~~lid~~G~I~~~~ 207 (227)
+..|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 689999999999875
No 355
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=22.12 E-value=70 Score=26.92 Aligned_cols=33 Identities=3% Similarity=0.013 Sum_probs=20.2
Q ss_pred eeEEEECCCCcEEEecCCCCChhhHHHHHHHHhh
Q 027134 192 FSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 225 (227)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~ 225 (227)
|...|+ .+|+++.+..+..-.+++.+.|++.++
T Consensus 367 ~~~~lf-~~G~~~~~v~~~~iv~~l~~~i~~~~~ 399 (406)
T 4g9p_A 367 PKAPVY-ADGKLLTILKGEGIAEEFLRLVEDYVK 399 (406)
T ss_dssp SEEEEE-ETTEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred CeeeEE-ECCEEEEecCHHHHHHHHHHHHHHHHH
Confidence 343444 579999886654445556666666554
No 356
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=20.89 E-value=1.8e+02 Score=18.90 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=29.2
Q ss_pred ceeEEEECCCCcEEEecCCCCChhhHHHHHHHHhhh
Q 027134 191 NFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 226 (227)
Q Consensus 191 ~P~~~lid~~G~I~~~~~g~~~~~~l~~~i~~lL~~ 226 (227)
.|..+..-.+|+-........+.+++.+.++.+.+.
T Consensus 65 ~P~i~a~Y~~G~ek~i~l~n~s~~eI~~~l~~l~~~ 100 (102)
T 1s3a_A 65 QPKLWARYAFGQETNVPLNNFSADQVTRALENVLSG 100 (102)
T ss_dssp SCEEEEEESSCCEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 466666677898888888888899999999998764
Done!