Query 027136
Match_columns 227
No_of_seqs 143 out of 2660
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 08:36:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 7.5E-36 2.6E-40 228.2 19.5 182 11-206 53-234 (253)
2 2f8y_A Notch homolog 1, transl 100.0 3.6E-35 1.2E-39 220.1 22.0 181 12-206 22-202 (223)
3 2rfa_A Transient receptor pote 100.0 2.3E-35 8E-40 222.4 20.9 180 14-206 2-208 (232)
4 2dzn_A Probable 26S proteasome 100.0 3.9E-35 1.3E-39 220.5 21.2 184 11-204 32-217 (228)
5 1oy3_D Transcription factor in 100.0 3.5E-35 1.2E-39 227.3 20.1 183 11-206 5-236 (282)
6 2dzn_A Probable 26S proteasome 100.0 4.5E-35 1.5E-39 220.2 20.0 181 15-206 2-185 (228)
7 3b7b_A Euchromatic histone-lys 100.0 3.4E-35 1.2E-39 222.2 19.1 183 10-206 39-221 (237)
8 1yyh_A HN1;, notch 1, ankyrin 100.0 2E-35 6.8E-40 225.9 17.3 185 9-206 4-201 (253)
9 4gpm_A Engineered protein OR26 100.0 6.4E-35 2.2E-39 209.7 18.8 156 17-186 6-161 (169)
10 3aji_A 26S proteasome non-ATPa 100.0 8.4E-35 2.9E-39 219.2 20.2 180 10-204 35-214 (231)
11 2xai_A ASB-9, ankyrin repeat a 100.0 6.6E-35 2.3E-39 224.0 19.2 186 4-206 25-210 (261)
12 3hra_A Ankyrin repeat family p 100.0 2E-34 6.7E-39 212.7 20.4 180 13-205 3-188 (201)
13 3aji_A 26S proteasome non-ATPa 100.0 3.8E-34 1.3E-38 215.6 21.6 179 14-206 5-183 (231)
14 4b93_B Ankyrin repeat domain-c 100.0 3.9E-35 1.3E-39 226.2 16.4 183 9-206 46-229 (269)
15 3b7b_A Euchromatic histone-lys 100.0 4.2E-34 1.4E-38 216.2 21.4 184 9-206 5-188 (237)
16 1k1a_A B-cell lymphoma 3-encod 100.0 3.5E-34 1.2E-38 216.9 20.8 179 12-204 6-192 (241)
17 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-34 3.8E-39 219.7 18.0 187 5-204 36-225 (241)
18 1oy3_D Transcription factor in 100.0 5.6E-35 1.9E-39 226.1 15.7 185 9-206 39-269 (282)
19 2xai_A ASB-9, ankyrin repeat a 100.0 7.9E-34 2.7E-38 218.0 20.9 176 14-206 2-177 (261)
20 3d9h_A CDNA FLJ77766, highly s 100.0 3.8E-34 1.3E-38 222.5 18.8 179 11-206 55-233 (285)
21 1ikn_D Protein (I-kappa-B-alph 100.0 2.9E-35 9.8E-40 222.7 11.6 184 10-206 3-195 (236)
22 3d9h_A CDNA FLJ77766, highly s 100.0 2E-33 6.8E-38 218.5 21.2 184 4-204 81-264 (285)
23 1wdy_A 2-5A-dependent ribonucl 100.0 2.6E-33 8.8E-38 216.7 20.9 188 5-206 62-264 (285)
24 3ljn_A Hypothetical protein; a 100.0 4.3E-34 1.5E-38 229.3 17.0 115 89-206 134-255 (364)
25 2etb_A Transient receptor pote 100.0 7.7E-34 2.6E-38 217.3 17.3 179 14-206 1-232 (256)
26 1s70_B 130 kDa myosin-binding 100.0 1.9E-33 6.5E-38 219.6 18.2 178 12-204 37-274 (299)
27 1n11_A Ankyrin; clathrin, BAND 100.0 3.6E-33 1.2E-37 229.0 20.6 185 7-206 204-388 (437)
28 3eu9_A Huntingtin-interacting 100.0 6.1E-33 2.1E-37 209.7 20.3 189 4-206 31-221 (240)
29 3v30_A DNA-binding protein rfx 100.0 1.8E-33 6.1E-38 202.9 16.5 170 15-198 2-171 (172)
30 3kea_A K1L; tropism, ANK repea 100.0 1.1E-33 3.9E-38 219.8 16.3 180 9-206 25-206 (285)
31 3utm_A Tankyrase-1; tankyrase, 100.0 1E-32 3.4E-37 219.5 21.5 184 7-205 50-290 (351)
32 4b93_B Ankyrin repeat domain-c 100.0 2.2E-33 7.5E-38 216.4 15.6 184 10-206 6-196 (269)
33 2pnn_A Transient receptor pote 100.0 1.7E-33 5.9E-38 217.3 14.8 187 8-206 6-244 (273)
34 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-32 6.2E-37 224.8 21.4 185 7-206 6-190 (437)
35 1wdy_A 2-5A-dependent ribonucl 100.0 2.7E-32 9.3E-37 211.0 21.2 177 13-204 37-228 (285)
36 2fo1_E LIN-12 protein; beta-ba 100.0 7.5E-33 2.6E-37 222.9 18.4 191 3-206 154-357 (373)
37 3utm_A Tankyrase-1; tankyrase, 100.0 2.2E-32 7.5E-37 217.6 19.1 187 3-204 79-322 (351)
38 3ljn_A Hypothetical protein; a 100.0 2.5E-32 8.6E-37 219.0 18.6 182 9-206 14-222 (364)
39 2rfm_A Putative ankyrin repeat 100.0 2.7E-32 9.1E-37 200.1 16.7 160 10-183 30-189 (192)
40 3jxi_A Vanilloid receptor-rela 100.0 7.1E-33 2.4E-37 212.3 13.6 192 12-223 2-246 (260)
41 3v31_A Ankyrin repeat family A 100.0 7.1E-32 2.4E-36 193.5 17.9 158 14-185 2-159 (167)
42 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.5E-31 5E-36 192.4 18.5 159 11-183 10-168 (169)
43 2f8y_A Notch homolog 1, transl 100.0 1.6E-31 5.4E-36 200.2 19.0 169 4-185 47-215 (223)
44 4gpm_A Engineered protein OR26 100.0 1.2E-31 4E-36 192.7 17.5 142 52-206 6-147 (169)
45 2fo1_E LIN-12 protein; beta-ba 100.0 1E-32 3.4E-37 222.2 13.1 180 13-206 123-324 (373)
46 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-32 4.5E-37 208.0 12.7 185 8-204 38-228 (236)
47 1sw6_A Regulatory protein SWI6 100.0 2.3E-32 8E-37 216.4 14.6 182 2-205 117-326 (327)
48 3twr_A Tankyrase-2; ankyrin re 100.0 3.7E-32 1.3E-36 194.6 13.7 159 12-184 5-163 (165)
49 2rfa_A Transient receptor pote 100.0 1.1E-31 3.9E-36 202.2 16.7 170 5-186 27-222 (232)
50 4g8k_A 2-5A-dependent ribonucl 100.0 2.7E-31 9.4E-36 210.9 19.4 181 13-206 57-284 (337)
51 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.6E-31 5.5E-36 190.6 16.1 156 14-184 4-160 (162)
52 1awc_B Protein (GA binding pro 100.0 4.4E-31 1.5E-35 186.8 18.1 151 15-180 2-152 (153)
53 4hbd_A KN motif and ankyrin re 100.0 2.9E-32 9.8E-37 211.0 12.6 178 15-205 76-260 (276)
54 3f6q_A Integrin-linked protein 100.0 1.4E-31 4.8E-36 194.2 15.4 161 14-187 4-164 (179)
55 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.5E-31 1.6E-35 187.2 16.7 154 15-183 2-155 (156)
56 3hra_A Ankyrin repeat family p 100.0 5.3E-31 1.8E-35 194.3 17.5 164 7-183 31-200 (201)
57 4hbd_A KN motif and ankyrin re 100.0 4.2E-31 1.4E-35 204.4 16.2 164 9-185 105-274 (276)
58 2pnn_A Transient receptor pote 100.0 4.3E-31 1.5E-35 203.9 15.3 179 11-200 50-272 (273)
59 2etb_A Transient receptor pote 100.0 1.7E-31 5.9E-36 204.2 12.4 162 11-185 39-245 (256)
60 2rfm_A Putative ankyrin repeat 100.0 1.7E-30 5.7E-35 190.5 16.8 147 47-206 32-178 (192)
61 3eu9_A Huntingtin-interacting 100.0 3.3E-30 1.1E-34 194.6 18.5 179 13-206 7-188 (240)
62 3jxi_A Vanilloid receptor-rela 100.0 3.8E-31 1.3E-35 202.7 11.0 161 13-186 44-250 (260)
63 3v31_A Ankyrin repeat family A 100.0 8.3E-30 2.8E-34 182.7 16.7 145 49-206 2-146 (167)
64 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.9E-30 2.7E-34 181.8 15.8 145 49-206 4-148 (162)
65 4g8k_A 2-5A-dependent ribonucl 100.0 2.9E-29 1E-33 199.2 20.5 182 11-206 21-250 (337)
66 3kea_A K1L; tropism, ANK repea 100.0 3.2E-30 1.1E-34 200.4 12.5 163 14-193 61-226 (285)
67 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.5E-29 1.2E-33 179.9 16.9 147 47-206 11-157 (169)
68 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.2E-30 4E-35 197.8 9.1 179 13-207 3-193 (239)
69 2vge_A RELA-associated inhibit 100.0 5.2E-32 1.8E-36 204.0 1.5 180 9-206 15-199 (229)
70 1awc_B Protein (GA binding pro 100.0 4.2E-29 1.4E-33 176.6 15.5 142 51-206 3-144 (153)
71 3v30_A DNA-binding protein rfx 100.0 6.1E-29 2.1E-33 179.0 16.5 145 50-206 2-146 (172)
72 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.2E-29 2.8E-33 175.5 16.0 143 50-206 2-144 (156)
73 3twr_A Tankyrase-2; ankyrin re 100.0 5.2E-29 1.8E-33 178.2 13.7 146 47-204 5-150 (165)
74 3f6q_A Integrin-linked protein 100.0 1.5E-28 5.2E-33 178.2 14.9 145 48-204 3-147 (179)
75 1bi7_B P16INK4A, MTS1, multipl 100.0 6.1E-29 2.1E-33 176.4 10.6 146 47-206 9-155 (156)
76 1s70_B 130 kDa myosin-binding 100.0 6.3E-28 2.1E-32 188.2 17.2 173 21-206 4-243 (299)
77 3t8k_A Uncharacterized protein 100.0 2.5E-29 8.5E-34 183.4 8.2 160 13-183 4-176 (186)
78 1d9s_A Cyclin-dependent kinase 100.0 3.9E-28 1.3E-32 168.3 12.4 130 41-184 4-134 (136)
79 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.8E-26 6.2E-31 157.3 15.4 125 49-185 1-125 (126)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-27 3.6E-32 170.0 9.5 144 10-168 7-151 (156)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 6.4E-27 2.2E-31 162.2 13.1 125 47-183 11-135 (136)
82 2vge_A RELA-associated inhibit 99.9 6E-28 2.1E-32 181.8 8.5 160 32-204 2-165 (229)
83 1d9s_A Cyclin-dependent kinase 99.9 3.8E-27 1.3E-31 163.3 10.8 132 7-152 4-136 (136)
84 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.6E-27 2.3E-31 177.2 11.7 142 47-202 2-144 (239)
85 1sw6_A Regulatory protein SWI6 99.9 2.5E-27 8.5E-32 187.5 9.8 168 18-206 100-294 (327)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 8.3E-26 2.8E-30 156.5 14.3 127 11-150 10-136 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-25 5.5E-30 152.6 15.0 126 14-152 1-126 (126)
88 3t8k_A Uncharacterized protein 99.9 9.6E-27 3.3E-31 169.7 8.3 143 50-206 6-165 (186)
89 3c5r_A BARD-1, BRCA1-associate 99.9 3.9E-26 1.3E-30 158.4 7.8 125 47-183 7-131 (137)
90 3deo_A Signal recognition part 99.9 6E-25 2E-29 159.8 13.1 141 11-183 40-181 (183)
91 2b0o_E UPLC1; arfgap, structur 99.9 4.4E-25 1.5E-29 172.5 13.0 139 50-207 151-298 (301)
92 3ui2_A Signal recognition part 99.9 6.6E-25 2.3E-29 166.7 13.3 142 10-183 40-182 (244)
93 3aaa_C Myotrophin, protein V-1 99.9 3.2E-25 1.1E-29 150.9 10.0 113 47-171 4-116 (123)
94 3ehr_A Osteoclast-stimulating 99.9 2E-25 6.9E-30 167.0 8.8 136 47-195 70-206 (222)
95 3c5r_A BARD-1, BRCA1-associate 99.9 2E-24 6.7E-29 149.7 12.1 117 84-204 2-118 (137)
96 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-24 3.8E-29 170.3 11.8 139 16-173 152-298 (301)
97 3deo_A Signal recognition part 99.9 2.5E-24 8.4E-29 156.5 11.3 127 47-204 41-168 (183)
98 2aja_A Ankyrin repeat family p 99.9 8.9E-27 3.1E-31 186.9 -2.3 168 14-206 91-265 (376)
99 3aaa_C Myotrophin, protein V-1 99.9 8.7E-24 3E-28 143.7 11.7 112 90-204 4-115 (123)
100 3ui2_A Signal recognition part 99.9 4.5E-24 1.6E-28 162.1 10.6 128 47-205 42-170 (244)
101 3ehr_A Osteoclast-stimulating 99.9 2.1E-24 7.2E-29 161.5 8.5 135 11-159 69-204 (222)
102 1dcq_A PYK2-associated protein 99.9 4.7E-23 1.6E-27 159.3 13.3 123 51-185 131-262 (278)
103 3jue_A Arfgap with coiled-coil 99.9 3.2E-23 1.1E-27 165.7 12.7 146 48-205 197-347 (368)
104 2aja_A Ankyrin repeat family p 99.9 1E-24 3.5E-29 175.0 3.5 166 14-206 64-236 (376)
105 3lvq_E ARF-GAP with SH3 domain 99.9 1.8E-22 6.3E-27 168.0 14.9 128 50-190 132-268 (497)
106 1dcq_A PYK2-associated protein 99.9 5.5E-22 1.9E-26 153.3 15.1 128 14-153 129-264 (278)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-22 1E-26 129.4 11.2 89 93-183 2-90 (93)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.9E-22 1.7E-26 128.4 11.6 80 126-207 1-80 (93)
109 3jue_A Arfgap with coiled-coil 99.9 3.9E-22 1.3E-26 159.5 13.1 146 13-171 197-347 (368)
110 3lvq_E ARF-GAP with SH3 domain 99.9 7E-22 2.4E-26 164.5 14.9 134 17-169 134-275 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.9 4.2E-22 1.4E-26 133.8 7.8 106 47-164 6-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.9 7.7E-22 2.6E-26 132.4 7.7 109 88-199 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.4E-19 8.4E-24 119.3 9.7 94 85-180 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 9.6E-19 3.3E-23 116.4 9.7 90 46-146 20-109 (110)
115 3zrh_A Ubiquitin thioesterase 43.0 67 0.0023 25.8 6.2 53 20-80 27-91 (454)
116 1gp8_A Protein (scaffolding pr 39.9 24 0.00084 17.6 2.2 19 165-183 17-35 (40)
117 3zrh_A Ubiquitin thioesterase 34.3 1.1E+02 0.0039 24.5 6.2 61 101-182 30-90 (454)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.5e-36 Score=228.25 Aligned_cols=182 Identities=15% Similarity=0.083 Sum_probs=168.9
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQD 90 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~ 90 (227)
.+..|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ ..+++..+
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~~-~~~~~~~~ 121 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASA-DANIQ-DNMGRTPLHAAVSADAQ--------GVFQILIRNR-ATDLDARM 121 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHST-TSCTTCCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC-CCCccccC
Confidence 36789999999999999999999999876 45455 88899999999999999 9999999998 23788899
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHH
Q 027136 91 EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIA 170 (227)
Q Consensus 91 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~ 170 (227)
..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+.
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAR 199 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999 79999999999999999999999999999999999 999999999999999
Q ss_pred hCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 171 ANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 171 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.|+.+++++|++. +.+.+.+|..|.||+++|+.++
T Consensus 200 ~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 200 EGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp HTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCHHHHHHHHHc-CCCccccccCCCCHHHHHHHcC
Confidence 9999999999977 5666799999999999999854
No 2
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.6e-35 Score=220.06 Aligned_cols=181 Identities=15% Similarity=0.083 Sum_probs=167.9
Q ss_pred hhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCC
Q 027136 12 YYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDE 91 (227)
Q Consensus 12 ~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~ 91 (227)
+..|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ +.+++..+.
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~~-~~~~~~~~~ 90 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASA-DANIQ-DNMGRTPLHAAVSADAQ--------GVFQILIRNR-ATDLDARMH 90 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHBT-TSCTTCCCT
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCC-CCCCc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC-CCCcccCCC
Confidence 6789999999999999999999999876 45455 88999999999999999 9999999998 237888899
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHh
Q 027136 92 HGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAA 171 (227)
Q Consensus 92 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 171 (227)
.|.||||+|+..++.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++.|++++ .++..|.||||+|+..
T Consensus 91 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 91 DGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAARE 168 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHH
T ss_pred CCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCcCHHHHHHHc
Confidence 999999999999999999999999999 78999999999999999999999999999999999 9999999999999999
Q ss_pred CcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 172 NLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 172 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
++.+++++|++. +.+.+.+|..|.||+++|+..+
T Consensus 169 ~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 169 GSYETAKVLLDH-FANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHHHc-CCCCccccccCCCHHHHHHHhc
Confidence 999999999987 5566799999999999999844
No 3
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.3e-35 Score=222.44 Aligned_cols=180 Identities=17% Similarity=0.115 Sum_probs=161.7
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc-----cc
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL-----AR 88 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~-----~~ 88 (227)
.|.||||.|++.|+.+.++.|++..+..++.+ +..|.||||+|+..|+. +++++|++.+ +++ +.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~~--~~~~~~~~~~ 70 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQR-GAMGETALHIAALYDNL--------EAAMVLMEAA--PELVFEPMTS 70 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHHC--GGGGGCCCCS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--chhccccccc
Confidence 48899999999999999999999854566666 88999999999999999 9999999999 655 56
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCC-------------CCChHHHHHHHcCChHHHHHHHhhcCCCcc
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGG-------------LDTLPIHEAAYKGHKNTFQYLLEVTHGVDI 155 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 155 (227)
.+..|.||||+|+..|+.+++++|++++++ ++..+. .|.||||+|+..|+.+++++|++.|++++
T Consensus 71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~- 148 (232)
T 2rfa_A 71 ELYEGQTALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR- 148 (232)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-
Confidence 677899999999999999999999999998 566654 79999999999999999999999999999
Q ss_pred ccCCCCccHHHHHHHhCcHHHH----HHHHHhCCCCc-----cccccccccHHHHHhhCC
Q 027136 156 YSGNDGARVLLLLIAANLYDVA----LDLLKLHPTIG-----RDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 156 ~~~~~g~t~L~~a~~~~~~~~~----~~Ll~~~~~~~-----~~~~~~g~t~l~~a~~~~ 206 (227)
.++..|+||||+|+..++.+++ ++|++.+.... +.+|..|.||||+|+..+
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 9999999999999999999988 89997755432 588999999999999833
No 4
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.9e-35 Score=220.52 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=149.2
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCc-ccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPD-ALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~-~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
.+..|.||||+|+..|+.++++.|++.++. ......+..|.||||+|+..|+. +++++|++.+.+.+++..
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~--------~~~~~Ll~~g~~~~~~~~ 103 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL--------EVVKSLYDRPLKPDLNKI 103 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCH--------HHHHHHHSSSSCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCH--------HHHHHHHhCCCCcccccC
Confidence 566788888888888888888888888732 22231367788888888888888 888888888755667777
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhc-CCCccccCCCCccHHHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVT-HGVDIYSGNDGARVLLLL 168 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~L~~a 168 (227)
+..|.||||+|+..++.+++++|++++.+ ++.++..|.||||+|+..|+.+++++|++.| ++++ .++..|+||||+|
T Consensus 104 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~d~~g~t~L~~A 181 (228)
T 2dzn_A 104 TNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN-WQDKQGWTPLFHA 181 (228)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC-CCCTTSCCHHHHH
T ss_pred CcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc-CcCCCCCCHHHHH
Confidence 88888888888888888888888888888 6888888888888888888888888888888 7777 8888888888888
Q ss_pred HHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 169 IAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 169 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
+..++.+++++|+++.+.+.+.+|..|.||+++|.+
T Consensus 182 ~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 182 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 888888888888855466777888888888888765
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.5e-35 Score=227.27 Aligned_cols=183 Identities=16% Similarity=0.064 Sum_probs=157.6
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCc--ccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPD--ALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~--~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
.+..|.||||+|+..|+.++++.|++.+.. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++.
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--a~~~~ 73 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEA--------STVEKLYAAG--AGVLV 73 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCSSC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCC
Confidence 456799999999999999999999987653 24455 78899999999999999 9999999999 88888
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCc----------------------------------------------ccc
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNPNL----------------------------------------------TNI 122 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~----------------------------------------------~~~ 122 (227)
++..|.||||+|+..++.+++++|+++++.. ++.
T Consensus 74 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T 1oy3_D 74 AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153 (282)
T ss_dssp CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC
T ss_pred CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC
Confidence 9999999999999999999999999876541 356
Q ss_pred CCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCC-CCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHH
Q 027136 123 RGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGN-DGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNK 201 (227)
Q Consensus 123 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 201 (227)
++..|.||||+|+..|+.+++++|++.|++++ ..+. .|+||||+|+..|+.+++++|++. +.+.+.+|..|.||||+
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN-KPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGS 231 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHH
Confidence 78889999999999999999999999999988 6664 499999999999999999999977 66678899999999999
Q ss_pred HhhCC
Q 027136 202 LAQKP 206 (227)
Q Consensus 202 a~~~~ 206 (227)
|+.++
T Consensus 232 A~~~~ 236 (282)
T 1oy3_D 232 ALLRP 236 (282)
T ss_dssp HHTSS
T ss_pred HHHcC
Confidence 98743
No 6
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.5e-35 Score=220.16 Aligned_cols=181 Identities=18% Similarity=0.155 Sum_probs=166.6
Q ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc-CCCCC
Q 027136 15 RYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR-QDEHG 93 (227)
Q Consensus 15 ~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~ 93 (227)
|.||||.|++.|+.+.++.+++.++...... +..|.||||+|+..|+. +++++|++.+...+++. .+..|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~~~~~~~~~~~~~~g 72 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAH--------EITSFLLSKMENVNLDDYPDDSG 72 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTCTTCCGGGCCCTTS
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccC-CCCCCCHHHHHHHcCCH--------HHHHHHHhccccccccccCCCCC
Confidence 6799999999999999999999998655445 88999999999999999 99999999984455555 78899
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcC--CCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHh
Q 027136 94 YTALFLCAGKGNLRALKVLVKCN--PNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAA 171 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 171 (227)
.||||+|+..|+.+++++|++++ ++ ++..+..|.||||+|+..++.+++++|++.|++++ .++..|+||||+|+..
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFNQIPLHRAASV 150 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCCCCHHHHHHHc
Confidence 99999999999999999999998 77 68899999999999999999999999999999999 9999999999999999
Q ss_pred CcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 172 NLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 172 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|+.+++++|++.++.+.+.+|..|.||||+|+..+
T Consensus 151 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence 99999999998876888899999999999999866
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.4e-35 Score=222.16 Aligned_cols=183 Identities=19% Similarity=0.180 Sum_probs=110.6
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
..+..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ +.+++..
T Consensus 39 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~~~~Ll~~~-~~~~~~~ 107 (237)
T 3b7b_A 39 TCSEDQRTPLMEAAENNHLEAVKYLIKAGA-LVDPK-DAEGSTCLHLAAKKGHY--------EVVQYLLSNG-QMDVNCQ 107 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CCCCC-CTTSCCHHHHHHHTTCH--------HHHHHHHTTT-CCCTTCC
T ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhCCC-CCCCC-CCCCCcHHHHHHHcCCH--------HHHHHHHhCC-CCCcccC
Confidence 334445556666666666666655555543 22233 45555666666666666 6666666655 2445555
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLI 169 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~ 169 (227)
+..|.||||+|+..++.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+
T Consensus 108 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 108 DDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH-AVNIHGDSPLHIAA 185 (237)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHH
Confidence 55666666666666666666666666665 45666666666666666666666666666666666 66666666666666
Q ss_pred HhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 170 AANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 170 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
..++.+++++|++. +.+.+.+|..|.||+|+|+..+
T Consensus 186 ~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 186 RENRYDCVVLFLSR-DSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp HTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHSCTTC
T ss_pred HhCCHhHHHHHHHc-CCCCCccCCCCCCHHHHHHHHH
Confidence 66666666666655 4444566666666666666533
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2e-35 Score=225.92 Aligned_cols=185 Identities=17% Similarity=0.075 Sum_probs=140.6
Q ss_pred chhhhcccHHHHHHHHhC-------------CHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHH
Q 027136 9 EDEYYVRYWPLYRMIEKN-------------DWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLD 75 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g-------------~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~ 75 (227)
+..+..|.||||+|+..| +.++++.|++.+....... +..|.||||+|+..|+. ++++
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~--------~~v~ 74 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRS--------DAAK 74 (253)
T ss_dssp ------------------------------------------------CC-CTTSCCHHHHHHHTTCH--------HHHH
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccccc-CCCCCcHHHHHHHcCCH--------HHHH
Confidence 455678999999999987 8999999999987554334 88999999999999999 9999
Q ss_pred HHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCcc
Q 027136 76 KLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDI 155 (227)
Q Consensus 76 ~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 155 (227)
+|++.+ ++++..+..|.||||+|+..++.+++++|++.+...++..+..|.||||+|+..++.+++++|++.|++++
T Consensus 75 ~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~- 151 (253)
T 1yyh_A 75 RLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN- 151 (253)
T ss_dssp HHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT-
T ss_pred HHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC-
Confidence 999999 88999999999999999999999999999999874378899999999999999999999999999999999
Q ss_pred ccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 156 YSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 156 ~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
..+..|+||||+|+..|+.+++++|++. +.+.+.+|..|.||||+|+..+
T Consensus 152 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCC
Confidence 9999999999999999999999999977 6667899999999999999744
No 9
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.4e-35 Score=209.74 Aligned_cols=156 Identities=24% Similarity=0.261 Sum_probs=146.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcH
Q 027136 17 WPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTA 96 (227)
Q Consensus 17 ~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~ 96 (227)
++|+.|++.|+.++|+.|++.+. +++.+ +..|.||||+|+..++. +++++|++.+ ++++.+|..|.||
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga-dvn~~-d~~g~t~l~~a~~~~~~--------~~~~~ll~~g--ad~~~~d~~g~Tp 73 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA-DVNAS-DSDGRTPLHHAAENGHK--------EVVKLLISKG--ADVNAKDSDGRTP 73 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCTTSCCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC-CCCCc-CCCCCCHHHHHHHcCCH--------HHHHHHHhcc--cchhhhccCCCCH
Confidence 47999999999999999999987 56566 89999999999999999 9999999999 8999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHH
Q 027136 97 LFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDV 176 (227)
Q Consensus 97 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 176 (227)
||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.++
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLAREHGNEEV 151 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999 79999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHhCCC
Q 027136 177 ALDLLKLHPT 186 (227)
Q Consensus 177 ~~~Ll~~~~~ 186 (227)
+++|++.++.
T Consensus 152 v~~Ll~~GA~ 161 (169)
T 4gpm_A 152 VKLLEKQGGW 161 (169)
T ss_dssp HHHHHTC---
T ss_pred HHHHHHCCCC
Confidence 9999977544
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.4e-35 Score=219.19 Aligned_cols=180 Identities=17% Similarity=0.080 Sum_probs=152.5
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
..+..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ .+++.+
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~ 102 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLGV-PVNDK-DDAGWSPLHIAASAGXD--------EIVKALLVKG--AHVNAV 102 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSCCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCC
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhCC-CCCCc-CCCCCCHHHHHHHcCHH--------HHHHHHHHcC--CCCCCC
Confidence 345678889999999999998888888865 44455 77888899999998888 8889888888 778888
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLI 169 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~ 169 (227)
+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+
T Consensus 103 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 103 NQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN-IQDTEGNTPLHLAC 180 (231)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc-ccCCCCCCHHHHHH
Confidence 88888999999988899999999988888 68888888999999999899999999998888888 88888899999999
Q ss_pred HhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 170 AANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 170 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
..++.+++++|++. +.+.+.+|..|.||+++|+.
T Consensus 181 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 181 DEERVEEAKFLVTQ-GASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHSCH
T ss_pred HCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHh
Confidence 98889999988877 55567888889999988865
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=224.01 Aligned_cols=186 Identities=12% Similarity=0.053 Sum_probs=161.2
Q ss_pred CCCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc
Q 027136 4 SDDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP 83 (227)
Q Consensus 4 ~~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~ 83 (227)
.+.+.+..+..|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+
T Consensus 25 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g-- 92 (261)
T 2xai_A 25 QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA-QVNGV-TADWHTPLFNACVSGSW--------DCVNLLLQHG-- 92 (261)
T ss_dssp TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHCC--
Confidence 344455667789999999999999999999998875 45455 78899999999999999 9999999998
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCcc
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGAR 163 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 163 (227)
++++. +..|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..++.+++++|++.|++++ . +..|+|
T Consensus 93 ~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~-~~~g~t 168 (261)
T 2xai_A 93 ASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVN-Q-GKGQDS 168 (261)
T ss_dssp CCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-C-CBTTBC
T ss_pred CCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-C-CCCCCC
Confidence 66664 34588999999999999999999999998 68899999999999999999999999999999988 4 788999
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 164 VLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 164 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|||+|+..++.+++++|++. +++.+.+|..|+||+|+|+..+
T Consensus 169 ~Lh~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 169 PLHAVARTASEELACLLMDF-GADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCTTC
T ss_pred hHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCChhhhccccc
Confidence 99999999999999999977 6667899999999999998644
No 12
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2e-34 Score=212.75 Aligned_cols=180 Identities=16% Similarity=0.155 Sum_probs=165.5
Q ss_pred hcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCC
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEH 92 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 92 (227)
..+.+|||.|+..|+.+.++.++..++..++.. +..|.||||+|+..|+. +++++|++.+ ++++..+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~ 71 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDI--------EIAKALIDRG--ADINLQNSI 71 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCCCCCC
Confidence 357899999999999999999999987666666 88999999999999999 9999999999 889999999
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhc-CCCccccCCCCccHHHHHHHh
Q 027136 93 GYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVT-HGVDIYSGNDGARVLLLLIAA 171 (227)
Q Consensus 93 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~L~~a~~~ 171 (227)
|.||||+|+..++.+++++|++.+...++..+..|.||||+|+..|+.+++++|++.| ++++ .++..|+||||+|+..
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVGL 150 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHh
Confidence 9999999999999999999996554337889999999999999999999999999999 8888 9999999999999998
Q ss_pred Cc-----HHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 172 NL-----YDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 172 ~~-----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
+. .+++++|++. +.+.+.+|..|.||||+|+..
T Consensus 151 ~~~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 151 REGNQLYQDIVKLLMEN-GADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp SCCSHHHHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHc
Confidence 87 9999999977 666789999999999999984
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.8e-34 Score=215.62 Aligned_cols=179 Identities=15% Similarity=0.088 Sum_probs=167.8
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
.+.+|||.|++.|+.+.++.++..++...+.. +..|.||||+|+..|+. +++++|++.+ .+++..+..|
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g 73 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRT-DQDSRTALHWACSAGHT--------EIVEFLLQLG--VPVNDKDDAG 73 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCSCCCCTTS
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcC-CCCCCCHHHHHHHcCcH--------HHHHHHHHhC--CCCCCcCCCC
Confidence 46789999999999999999999987666555 88999999999999999 9999999999 8899999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCc
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANL 173 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~ 173 (227)
.||||+|+..++.+++++|++++.+ ++.++..|.||||+|+..++.+++++|++.|++++ ..+..|.||||+|+..|+
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-AKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCC
Confidence 9999999999999999999999999 68999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 174 YDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 174 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.+++++|++. +.+.+.+|..|.||||+|+..+
T Consensus 152 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 183 (231)
T 3aji_A 152 LKMVHILLFY-KASTNIQDTEGNTPLHLACDEE 183 (231)
T ss_dssp HHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHhc-CCCccccCCCCCCHHHHHHHCC
Confidence 9999999976 6667799999999999999854
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=226.17 Aligned_cols=183 Identities=16% Similarity=0.125 Sum_probs=146.0
Q ss_pred chhhhcccHHHHHHHHhCCHH-HHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccc
Q 027136 9 EDEYYVRYWPLYRMIEKNDWR-GVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLA 87 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~-~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~ 87 (227)
+..+..+.+||+.|+..+..+ .++.|+..+. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Ga-dvn~~-d~~G~TpLh~A~~~g~~--------~~v~~Ll~~~--a~~~ 113 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGL-GVNVT-SQDGSSPLHVAALHGRA--------DLIPLLLKHG--ANAG 113 (269)
T ss_dssp -----------------------------CCC-CTTCC-CTTSCCHHHHHHHTTCT--------THHHHHHHTT--CCTT
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCC-CCCCc-CCCCCCHHHHHHHcCcH--------HHHHHHHhcC--CCcC
Confidence 344567889999999888765 6777777775 56566 88999999999999999 9999999999 8899
Q ss_pred cCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHH
Q 027136 88 RQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLL 167 (227)
Q Consensus 88 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 167 (227)
..+..|.||+|+|+..++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|+||||+
T Consensus 114 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn-~~~~~g~t~Lh~ 191 (269)
T 4b93_B 114 ARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN-ASNNKGNTALHE 191 (269)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT-CBCTTSCBHHHH
T ss_pred ccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-ccccCCCcHHHH
Confidence 9999999999999999999999999999999 79999999999999999999999999999999999 999999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 168 LIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 168 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|+..|+.+++++|++. +++.+.+|..|+||||+|++++
T Consensus 192 A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 192 AVIEKHVFVVELLLLH-GASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHTTCHHHHHHHHHT-TCCSCCCCTTSCCSGGGSCTTC
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHhCC
Confidence 9999999999999977 6677899999999999998755
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.2e-34 Score=216.16 Aligned_cols=184 Identities=16% Similarity=0.068 Sum_probs=168.9
Q ss_pred chhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 9 EDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
+.++..|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ .+++.
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~ 72 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGA-NIDTC-SEDQRTPLMEAAENNHL--------EAVKYLIKAG--ALVDP 72 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHTTCH--------HHHHHHHTTT--CCCCC
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCC-CcCcc-CCCCCCHHHHHHHhCCH--------HHHHHHHhCC--CCCCC
Confidence 3456779999999999999999999999876 44455 78899999999999999 9999999999 88999
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHH
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLL 168 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a 168 (227)
.+..|.||||+|+..|+.+++++|++.++..++..+..|.||||+|+..++.+++++|++.|++++ ..+..|.||||+|
T Consensus 73 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A 151 (237)
T 3b7b_A 73 KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEENICLHWA 151 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHH
Confidence 999999999999999999999999999843378899999999999999999999999999999999 9999999999999
Q ss_pred HHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 169 IAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 169 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
+..|+.+++++|++. +.+.+.+|..|.||||+|+..+
T Consensus 152 ~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 152 AFSGCVDIAEILLAA-KCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp HHHCCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHCCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhC
Confidence 999999999999977 5666789999999999999855
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.5e-34 Score=216.92 Aligned_cols=179 Identities=18% Similarity=0.144 Sum_probs=113.5
Q ss_pred hhcccHHHHHHHHhCCHHHHHHHHHc---CCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 12 YYVRYWPLYRMIEKNDWRGVEDFVTN---HPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 12 ~~~~~~~L~~a~~~g~~~~v~~ll~~---~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
+..|.||||.|+..|+.++++.|++. .+..++.. +..|.||||+|+..|+. +++++|++.+ .+++.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~ 74 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLP--------SVVRLLVTAG--ASPMA 74 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCH--------HHHHHHHHcC--CCccc
Confidence 44566777777777777666666652 22234344 56666777777776666 6666666666 56666
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCC----CccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccC-CCCcc
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNP----NLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSG-NDGAR 163 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t 163 (227)
.+..|.||||+|+..++.+++++|++.++ + ++..+..|.||||+|+..++.+++++|++.|++++ ..+ ..|.|
T Consensus 75 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~g~t 152 (241)
T 1k1a_A 75 LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LEARNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIKSGRS 152 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-cccccCCCc
Confidence 66666666666666666666666666655 3 45566666666666666666666666666666666 444 55666
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 164 VLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 164 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
|||+|+..|+.+++++|++. +.+.+.+|..|.||||+|+.
T Consensus 153 ~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 192 (241)
T 1k1a_A 153 PLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALHSASG 192 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 66666666666666666655 44445666666666666665
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-34 Score=219.69 Aligned_cols=187 Identities=16% Similarity=0.065 Sum_probs=169.0
Q ss_pred CCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc-
Q 027136 5 DDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP- 83 (227)
Q Consensus 5 ~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~- 83 (227)
+...+..+..|.||||+|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+.+
T Consensus 36 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~l~~A~~~~~~--------~~~~~Ll~~~~~~ 105 (241)
T 1k1a_A 36 GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA-SPMAL-DRHGQTAAHLACEHRSP--------TCLRALLDSAAPG 105 (241)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHHSCTT
T ss_pred CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCC-Ccccc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcCCCc
Confidence 34445667789999999999999999999999886 44455 88899999999999999 999999999821
Q ss_pred -cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC-CCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCC
Q 027136 84 -QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG-GLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDG 161 (227)
Q Consensus 84 -~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 161 (227)
.+++..+..|.||||+|+..++.+++++|++.+.+ ++..+ ..|.||||+|+..|+.+++++|++.|++++ .++..|
T Consensus 106 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g 183 (241)
T 1k1a_A 106 TLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN-AQMYSG 183 (241)
T ss_dssp SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CBCTTS
T ss_pred cccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCC
Confidence 16778889999999999999999999999999999 57777 889999999999999999999999999999 999999
Q ss_pred ccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 162 ARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 162 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
+||||+|+..|+.+++++|++. +.+.+.+|..|.||+++|+.
T Consensus 184 ~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 184 SSALHSASGRGLLPLVRTLVRS-GADSSLKNCHNDTPLMVARS 225 (241)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCTTTTCSS
T ss_pred CCHHHHHHHcCCHHHHHHHHhc-CCCCCCcCCCCCCHHHHHHh
Confidence 9999999999999999999976 66678999999999999987
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.6e-35 Score=226.14 Aligned_cols=185 Identities=11% Similarity=-0.012 Sum_probs=153.8
Q ss_pred chhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc-----
Q 027136 9 EDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP----- 83 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~----- 83 (227)
+..+..|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+..
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~-~~~g~tpL~~A~~~~~~--------~~v~~Ll~~~~~~~~~~ 108 (282)
T 1oy3_D 39 DLQNDLGQTALHLAAILGEASTVEKLYAAGA-GVLVA-ERGGHTALHLACRVRAH--------TCACVLLQPRPSHPRDA 108 (282)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSSCC-CTTSCCHHHHHTTTTCH--------HHHHHHSSSCCSSCCCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHHHcCCc--------chhHhhhccCCCCchhh
Confidence 4556789999999999999999999999986 45455 88999999999999999 999999997621
Q ss_pred ----------------------------------------cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccC
Q 027136 84 ----------------------------------------QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIR 123 (227)
Q Consensus 84 ----------------------------------------~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 123 (227)
.+++..+..|.||||+|+..|+.+++++|++++++ ++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~ 187 (282)
T 1oy3_D 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKP 187 (282)
T ss_dssp -----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCC
T ss_pred HHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCC
Confidence 22567788999999999999999999999999999 6777
Q ss_pred CC-CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHH
Q 027136 124 GG-LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKL 202 (227)
Q Consensus 124 ~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a 202 (227)
+. .|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..++.+++++|++. +++.+.+|..|.||+++|
T Consensus 188 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPT-ARMYGGRTPLGSALLRPNPILARLLRAH-GAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHTSSCHHHHHHHHHT-TCCCCCCC----------
T ss_pred CCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-ccccCCCCHHHHHHHcCCcHHHHHHHHc-CCCcCcCCCccccccccc
Confidence 64 49999999999999999999999999999 9999999999999999999999999977 666789999999999998
Q ss_pred hhCC
Q 027136 203 AQKP 206 (227)
Q Consensus 203 ~~~~ 206 (227)
....
T Consensus 266 ~~~~ 269 (282)
T 1oy3_D 266 GSDS 269 (282)
T ss_dssp ----
T ss_pred CCcc
Confidence 7644
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=218.02 Aligned_cols=176 Identities=15% Similarity=0.136 Sum_probs=160.1
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
+|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ ++++..+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g 69 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW-AVNII-TADHVSPLHEACLGGHL--------SCVKILLKHG--AQVNGVTADW 69 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC-CSSCC-CTTCCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTTS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCc-CCCCCCHHHHHHHcCCH--------HHHHHHHHCC--CCCCCCCCCC
Confidence 58899999999999999999999876 45556 88999999999999999 9999999999 8999999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCc
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANL 173 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~ 173 (227)
.||||+|+..|+.+++++|++++++ ++. +..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQ 146 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-SSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHhCC
Confidence 9999999999999999999999998 453 5569999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 174 YDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 174 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.+++++|++.+... + .+..|.||||+|+..+
T Consensus 147 ~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 147 RACVKKLLESGADV-N-QGKGQDSPLHAVARTA 177 (261)
T ss_dssp HHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcC
Confidence 99999999885544 3 4889999999999754
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.8e-34 Score=222.51 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=101.8
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQD 90 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~ 90 (227)
.+..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++..+
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--a~~~~~~ 122 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGW-AVNII-TADHVSPLHEACLGGHL--------SCVKILLKHG--AQVNGVT 122 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTC-CSCEE-CTTCCCHHHHHHHTTCH--------HHHHHHHHTT--CCSSCCC
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCc-CCCCCCHHHHHHHCCcH--------HHHHHHHHCC--CCCCCCC
Confidence 44556666666666666666666666654 33344 55666666666666666 6666666666 5566666
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHH
Q 027136 91 EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIA 170 (227)
Q Consensus 91 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~ 170 (227)
..|.||||+|+..|+.+++++|++.+++ ++. +..|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+.
T Consensus 123 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~ 199 (285)
T 3d9h_A 123 ADWHTPLFNACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACE 199 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHH
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHH
Confidence 6666666666666666666666666555 232 2235555555555555555555555555555 555555555555555
Q ss_pred hCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 171 ANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 171 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.|+.+++++|++.+. +.+ .+..|.||||+|+..+
T Consensus 200 ~~~~~~v~~Ll~~ga-~~~-~~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 200 NQQRACVKKLLESGA-DVN-QGKGQDSPLHAVVRTA 233 (285)
T ss_dssp TTCHHHHHHHHHTTC-CTT-CCBTTBCHHHHHHHTT
T ss_pred cCcHHHHHHHHHCCC-CCC-CCCCCCCHHHHHHHcC
Confidence 555555555554422 222 2445555555555433
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.9e-35 Score=222.66 Aligned_cols=184 Identities=15% Similarity=0.047 Sum_probs=160.6
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCc---ccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPD---ALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL 86 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~---~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 86 (227)
..+..|.||||.|+..|+.++++.|++.+.. .++.. +..|.||||+|+..|+. +++++|++.+ +++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~ 71 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQP--------EIAEALLGAG--CDP 71 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCC-CTTCCCHHHHHHHTTCH--------HHHHCCCSCC--CCS
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhcc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCC
Confidence 4567799999999999999999999887653 35455 78899999999999999 9999999999 889
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC-----ccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCC-C
Q 027136 87 ARQDEHGYTALFLCAGKGNLRALKVLVKCNPN-----LTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGN-D 160 (227)
Q Consensus 87 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~ 160 (227)
+.++..|.||||+|+..|+.+++++|++.+.+ ..+..+..|.||||+|+..|+.+++++|++.|++++ .++. .
T Consensus 72 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~ 150 (236)
T 1ikn_D 72 ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCN 150 (236)
T ss_dssp CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCC
Confidence 99999999999999999999999999999753 246788899999999999999999999999999999 7776 9
Q ss_pred CccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 161 GARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 161 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|.||||+|+..|+.+++++|++. +.+.+.+|..|.|||++|+.++
T Consensus 151 g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 151 GRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHHHHccC
Confidence 99999999999999999999977 6667899999999999998744
No 22
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=218.46 Aligned_cols=184 Identities=12% Similarity=0.057 Sum_probs=167.1
Q ss_pred CCCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc
Q 027136 4 SDDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP 83 (227)
Q Consensus 4 ~~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~ 83 (227)
.+...+..+..|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+
T Consensus 81 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g-- 148 (285)
T 3d9h_A 81 QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA-QVNGV-TADWHTPLFNACVSGSW--------DCVNLLLQHG-- 148 (285)
T ss_dssp TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTC-CSSCC-CTTCCCHHHHHHHHTCH--------HHHHHHHHTT--
T ss_pred CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCHH--------HHHHHHHHCC--
Confidence 344556777889999999999999999999999876 45455 88999999999999999 9999999999
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCcc
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGAR 163 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 163 (227)
.+++..+ .|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.|++++ . +..|.|
T Consensus 149 ~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~-~~~g~t 224 (285)
T 3d9h_A 149 ASVQPES-DLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVN-Q-GKGQDS 224 (285)
T ss_dssp CCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-C-CBTTBC
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-C-CCCCCC
Confidence 6666544 599999999999999999999999999 79999999999999999999999999999999988 4 888999
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 164 VLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 164 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
|||+|+..++.+++++|++. +.+.+.+|..|+|||++|+.
T Consensus 225 ~L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 225 PLHAVVRTASEELACLLMDF-GADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCT
T ss_pred HHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHhcC
Confidence 99999999999999999977 67778999999999999985
No 23
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-33 Score=216.75 Aligned_cols=188 Identities=16% Similarity=0.123 Sum_probs=163.7
Q ss_pred CCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcc
Q 027136 5 DDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQ 84 (227)
Q Consensus 5 ~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~ 84 (227)
+...+..+..|.||||+|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ .
T Consensus 62 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~~~~Ll~~g--~ 129 (285)
T 1wdy_A 62 GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGA-DVNEC-DFYGFTAFMEAAVYGKV--------KALKFLYKRG--A 129 (285)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCB-CTTCCBHHHHHHHTTCH--------HHHHHHHHTT--C
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcc-CcccCCHHHHHHHhCCH--------HHHHHHHHhC--C
Confidence 33444555677888888888888888888888765 34444 77788888888888888 9999999988 6
Q ss_pred ccccC----------CCCCCcHHHHHHhcCCHHHHHHHHHc-CCCccccCCCCCChHHHHHHHcCC----hHHHHHHHhh
Q 027136 85 TLARQ----------DEHGYTALFLCAGKGNLRALKVLVKC-NPNLTNIRGGLDTLPIHEAAYKGH----KNTFQYLLEV 149 (227)
Q Consensus 85 ~~~~~----------~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~ 149 (227)
+++.. +..|.||||+|+..|+.+++++|++. +.+ ++..+..|.||||+|+..++ .+++++|++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~ 208 (285)
T 1wdy_A 130 NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208 (285)
T ss_dssp CTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred CcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence 66655 77899999999999999999999998 777 78999999999999999999 8999999999
Q ss_pred cCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 150 THGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 150 ~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|++++ .++..|+||||+|+..|+.+++++|++..+.+.+.+|..|.||||+|+..+
T Consensus 209 g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 209 GADVN-VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp TCCSS-CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 99999 999999999999999999999999999778888899999999999999843
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.3e-34 Score=229.29 Aligned_cols=115 Identities=21% Similarity=0.328 Sum_probs=108.6
Q ss_pred CCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCC-----CccccCCCC
Q 027136 89 QDEHGYTALFLCAGKG--NLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHG-----VDIYSGNDG 161 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g 161 (227)
.+..|.||||+|+..| +.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|++.|++ ++ ..+..|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~~~g 211 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD-YANKQG 211 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT-CCCTTC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc-ccCCCC
Confidence 7778999999999999 99999999999999 799999999999999999999999999999998 88 899999
Q ss_pred ccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 162 ARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 162 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
+||||+|+..|+.+++++|++. +.+.+.+|..|.||||+|+..+
T Consensus 212 ~t~L~~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 212 NSHLHWAILINWEDVAMRFVEM-GIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhC
Confidence 9999999999999999999976 6667899999999999999854
No 25
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=7.7e-34 Score=217.28 Aligned_cols=179 Identities=20% Similarity=0.192 Sum_probs=155.6
Q ss_pred cccHHHHHHHHhCCHHH----HHHHHHcCCccccc---ccCCCCccHHHHHHHh---cCccccchhHHHHHHHHHhcCCc
Q 027136 14 VRYWPLYRMIEKNDWRG----VEDFVTNHPDALTA---KTVAPGSSTIFHAIVE---LLVDVESDEATCLLDKLASKVDP 83 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~----v~~ll~~~~~~~~~---~~~~~g~t~L~~a~~~---~~~~~~~~~~~~~~~~Ll~~~~~ 83 (227)
.|.||||.|+..|+.+. ++.+++.+. .++. ..+..|.||||+|+.. |+. +++++|++.+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~-~i~~~~~~~d~~g~t~L~~A~~~~~~g~~--------~~v~~Ll~~g-- 69 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSK-YLTDSAYTEGSTGKTCLMKAVLNLQDGVN--------ACIMPLLQID-- 69 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTC-CTTSGGGSBTTTTBCHHHHHHHTCBTTBC--------TTHHHHHHHH--
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCC-CcccccccCCCCCCCHHHHHHHccccchH--------HHHHHHHhcC--
Confidence 37899999999999985 455555665 4444 1288999999999999 999 9999999998
Q ss_pred ccccc-----------CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC-------------CChHHHHHHHcCC
Q 027136 84 QTLAR-----------QDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL-------------DTLPIHEAAYKGH 139 (227)
Q Consensus 84 ~~~~~-----------~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-------------g~t~l~~a~~~~~ 139 (227)
++++. .|..|.||||+|+..|+.+++++|++++++ ++..+.. |.||||+|+..|+
T Consensus 70 ~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 70 KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC
T ss_pred CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCC
Confidence 55542 346799999999999999999999999999 6888776 9999999999999
Q ss_pred hHHHHHHHh---hcCCCccccCCCCccHHHHHHH--hCcHH-------HHHHHHHhCCCCc-------cccccccccHHH
Q 027136 140 KNTFQYLLE---VTHGVDIYSGNDGARVLLLLIA--ANLYD-------VALDLLKLHPTIG-------RDSIDSRRIVLN 200 (227)
Q Consensus 140 ~~~~~~Ll~---~~~~~~~~~~~~g~t~L~~a~~--~~~~~-------~~~~Ll~~~~~~~-------~~~~~~g~t~l~ 200 (227)
.+++++|++ .|++++ .++..|+||||+|+. .++.+ ++++|++. +.+. +.+|..|.||||
T Consensus 149 ~~~v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 149 WDVVTYLLENPHQPASLE-ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp HHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHHHhccccCCCcC-ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHH
Confidence 999999999 999999 999999999999999 77888 99999988 4444 789999999999
Q ss_pred HHhhCC
Q 027136 201 KLAQKP 206 (227)
Q Consensus 201 ~a~~~~ 206 (227)
+|+..+
T Consensus 227 ~A~~~g 232 (256)
T 2etb_A 227 LAAKEG 232 (256)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 999943
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-33 Score=219.56 Aligned_cols=178 Identities=13% Similarity=0.103 Sum_probs=158.3
Q ss_pred hhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCC
Q 027136 12 YYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDE 91 (227)
Q Consensus 12 ~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~ 91 (227)
...+.++|+.|+..|+.+.++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ ++++..+.
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--a~~~~~~~ 104 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGA-DINYA-NVDGLTALHQACIDDNV--------DMVKFLVENG--ANINQPDN 104 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCC-CTTCB-CTTCCBHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCT
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCC-CCccc-CCCCCCHHHHHHHcCCH--------HHHHHHHHCC--CCCCCCCC
Confidence 3457799999999999999999999886 45555 88899999999999999 9999999999 88999999
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC-----------------------------------------------
Q 027136 92 HGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG----------------------------------------------- 124 (227)
Q Consensus 92 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~----------------------------------------------- 124 (227)
.|.||||+|+..|+.+++++|++++++ ++..+
T Consensus 105 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
T 1s70_B 105 EGWIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQ 183 (299)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHH
Confidence 999999999999999999999999876 34433
Q ss_pred -------------CCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCcccc
Q 027136 125 -------------GLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDS 191 (227)
Q Consensus 125 -------------~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 191 (227)
..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++. +++.+.+
T Consensus 184 ~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~ 261 (299)
T 1s70_B 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN-IKDYDGWTPLHAAAHWGKEEACRILVEN-LCDMEAV 261 (299)
T ss_dssp HHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC
T ss_pred HHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCc
Confidence 457788999999999999999999999999 9999999999999999999999999977 6667899
Q ss_pred ccccccHHHHHhh
Q 027136 192 IDSRRIVLNKLAQ 204 (227)
Q Consensus 192 ~~~g~t~l~~a~~ 204 (227)
|..|.||+++|+.
T Consensus 262 d~~g~t~l~~A~~ 274 (299)
T 1s70_B 262 NKVGQTAFDVADE 274 (299)
T ss_dssp CTTSCCTTTSCCS
T ss_pred CCCCCCHHHHHHH
Confidence 9999999999864
No 27
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-33 Score=228.97 Aligned_cols=185 Identities=18% Similarity=0.157 Sum_probs=162.6
Q ss_pred cCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc
Q 027136 7 QGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL 86 (227)
Q Consensus 7 ~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 86 (227)
..+..+..|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ +++
T Consensus 204 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~~--~~~ 271 (437)
T 1n11_A 204 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG-SANAE-SVQGVTPLHLAAQEGHA--------EMVALLLSKQ--ANG 271 (437)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHTTCH--------HHHHHHHTTT--CCT
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHHHCCCH--------HHHHHHHhcC--CCC
Confidence 334445567888888888888888888887775 34444 77888999999999999 9999999998 888
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHH
Q 027136 87 ARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLL 166 (227)
Q Consensus 87 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 166 (227)
+..+..|.||||+|+..|+.+++++|++++.+ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|+||||
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-~~~~~g~t~L~ 349 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN-AKTKLGYSPLH 349 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT-CCCTTSCCHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC-CCCCCCCCHHH
Confidence 88899999999999999999999999999998 68899999999999999999999999999999999 99999999999
Q ss_pred HHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 167 LLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 167 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
+|+..|+.+++++|++. +++.+.+|..|.||+++|++.+
T Consensus 350 ~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 350 QAAQQGHTDIVTLLLKN-GASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp HHHHTTCHHHHHHHHHT-TCCSCCCCSSSCCHHHHHHHTT
T ss_pred HHHHCChHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999999976 6677899999999999998866
No 28
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.1e-33 Score=209.65 Aligned_cols=189 Identities=14% Similarity=0.058 Sum_probs=166.8
Q ss_pred CCCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc
Q 027136 4 SDDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP 83 (227)
Q Consensus 4 ~~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~ 83 (227)
.+...+..+..|.||||.|+..|+.++++.|++.+....... +..|.||||+|+..|+. +++++|++.+
T Consensus 31 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~t~L~~A~~~~~~--------~~v~~Ll~~g-- 99 (240)
T 3eu9_A 31 AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG-GDLNSTPLHWATRQGHL--------SMVVQLMKYG-- 99 (240)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB-TTTTBCHHHHHHHHTCH--------HHHHHHHHTT--
T ss_pred cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc-CCcCCChhHHHHHcCCH--------HHHHHHHHcC--
Confidence 344455666789999999999999999999999887544333 56689999999999999 9999999998
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCC-hHHHHHHHhhcCCCccccCC-CC
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGH-KNTFQYLLEVTHGVDIYSGN-DG 161 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~~-~g 161 (227)
++++..+..|.||||+|+..++.+++++|++++.+ ++..+..|.||||+|+..++ .+++++|++.+++++ ..+. .|
T Consensus 100 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~-~~~~~~g 177 (240)
T 3eu9_A 100 ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVN-LGDKYHK 177 (240)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTT-CCCTTTC
T ss_pred CCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcc-hhhccCC
Confidence 88888999999999999999999999999999998 68899999999999997766 889999999999998 6665 89
Q ss_pred ccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 162 ARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 162 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.||||+|+..|+.+++++|++. +.+.+.+|..|.||+++|++.+
T Consensus 178 ~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 178 NTALHWAVLAGNTTVISLLLEA-GANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTTSCBHHHHHHHTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999988 5666799999999999999843
No 29
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.8e-33 Score=202.85 Aligned_cols=170 Identities=12% Similarity=0.010 Sum_probs=151.6
Q ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCC
Q 027136 15 RYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGY 94 (227)
Q Consensus 15 ~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 94 (227)
+.+|||.|+..|+.+.++.+++.++..++.+ +..|.||||+|+..|+. +++++|++.+ ++++..+..|.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~g~ 70 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKP-DERGFTPLIWASAFGEI--------ETVRFLLEWG--ADPHILAKERE 70 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHHT--CCTTCCCTTCC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCchhhcccCC
Confidence 4589999999999999999999988666666 88999999999999999 9999999999 88999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcH
Q 027136 95 TALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLY 174 (227)
Q Consensus 95 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~ 174 (227)
||||+|+..++.+++++|++++.+ ++.++..|.||||+|+..++.+++++|++.|++++ .++..|.||||+|+..++.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 71 SALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT-TEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHhCcH
Confidence 999999999999999999999999 79999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHhCCCCccccccccccH
Q 027136 175 DVALDLLKLHPTIGRDSIDSRRIV 198 (227)
Q Consensus 175 ~~~~~Ll~~~~~~~~~~~~~g~t~ 198 (227)
+++++|++.+. ....++..|.||
T Consensus 149 ~~~~~L~~~~~-~~~~~~~~~~~p 171 (172)
T 3v30_A 149 KVQQVIENHIL-KLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHHH-HHSCC-------
T ss_pred HHHHHHHHHHH-HHhcccCCCCCC
Confidence 99999998844 445667777776
No 30
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.1e-33 Score=219.82 Aligned_cols=180 Identities=16% Similarity=0.053 Sum_probs=163.2
Q ss_pred chhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 9 EDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
+..+..|.||||+|+..|+.++++.|++.+.. ++.. +|.||||+|+..|+. +++++|++.+ ++++.
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~---~g~t~L~~A~~~g~~--------~~v~~Ll~~g--a~~~~ 90 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL---ENEFPLHQAATLEDT--------KIVKILLFSG--LDDSQ 90 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC---TTCCHHHHHTTSSSC--------HHHHHHHHTT--CCTTC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC---CCCCHHHHHHHcCCH--------HHHHHHHHCC--CCCCC
Confidence 45667899999999999999999999999863 3333 589999999999999 9999999999 88999
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCC-ChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHH
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLD-TLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLL 167 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 167 (227)
++..|.||||+|+..|+.+++++|++++++ ++.++..| .||||+|+..|+.+++++|++.|++.. .. ..|.||||+
T Consensus 91 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~-~~g~t~L~~ 167 (285)
T 3kea_A 91 FDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-DL-AILLSCIHI 167 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC-CC-STHHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc-cc-cCCccHHHH
Confidence 999999999999999999999999999999 79999999 799999999999999999999998764 22 389999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCccccccccccH-HHHHhhCC
Q 027136 168 LIAANLYDVALDLLKLHPTIGRDSIDSRRIV-LNKLAQKP 206 (227)
Q Consensus 168 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~-l~~a~~~~ 206 (227)
|+..|+.+++++|++. +.+.+.+|..|.|| ||+|+..+
T Consensus 168 A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 168 TIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHTTCHHHHHHHHHH-HHHTCTTCCCBCCTTHHHHHHHT
T ss_pred HHHcChHHHHHHHHHc-CCCCCcccCCCCChHHHHHHHcC
Confidence 9999999999999988 66678999999998 99999744
No 31
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1e-32 Score=219.53 Aligned_cols=184 Identities=16% Similarity=0.051 Sum_probs=137.9
Q ss_pred cCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc
Q 027136 7 QGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL 86 (227)
Q Consensus 7 ~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 86 (227)
..+..+..|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ +++
T Consensus 50 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~g~~--------~iv~~Ll~~g--~~~ 117 (351)
T 3utm_A 50 NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA-DVHAK-DKGGLVPLHNACSYGHY--------EVTELLLKHG--ACV 117 (351)
T ss_dssp TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHTTCH--------HHHHHHHHTT--CCT
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcc-CCCCCcHHHHHHHCCCH--------HHHHHHHHCC--CCC
Confidence 344556678899999999999999999988876 45455 78889999999999999 9999999988 788
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccC-------------------------------------------
Q 027136 87 ARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIR------------------------------------------- 123 (227)
Q Consensus 87 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~------------------------------------------- 123 (227)
+..+..|.||||+|+..|+.+++++|++++.+ ++..
T Consensus 118 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (351)
T 3utm_A 118 NAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKK 196 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHH
Confidence 88888889999999998888888888888765 3322
Q ss_pred -----------CCCCChHHHHHHHc---CChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCcc
Q 027136 124 -----------GGLDTLPIHEAAYK---GHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGR 189 (227)
Q Consensus 124 -----------~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~ 189 (227)
+..|.||||+|+.. +..+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. +.+.+
T Consensus 197 ~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n 274 (351)
T 3utm_A 197 TLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN-EKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMN 274 (351)
T ss_dssp HTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTT
T ss_pred HHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCC
Confidence 24455666666666 33566667777776666 6677777777777777777777777755 45556
Q ss_pred ccccccccHHHHHhhC
Q 027136 190 DSIDSRRIVLNKLAQK 205 (227)
Q Consensus 190 ~~~~~g~t~l~~a~~~ 205 (227)
.+|..|.||||+|+..
T Consensus 275 ~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 275 ALDSLGQTALHRAALA 290 (351)
T ss_dssp CCCTTSCCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHc
Confidence 6777777777777663
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=216.39 Aligned_cols=184 Identities=16% Similarity=0.158 Sum_probs=141.3
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCcc-------cccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCC
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDA-------LTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVD 82 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~-------~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~ 82 (227)
.+++.+.++|+.|+..|+.++|+.|++.+... .+.. +..|.|||+.|+..+..+ .++++|++.|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~-------~~v~~Ll~~G- 76 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQ-------KRLAKVPASG- 76 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------------CC-
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHH-------HHHHHHHHCC-
Confidence 34556789999999999999999999886532 2223 667899999999887761 5889999999
Q ss_pred ccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCc
Q 027136 83 PQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGA 162 (227)
Q Consensus 83 ~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 162 (227)
++++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||+++|+..++.+++++|++.|++++ .++..|+
T Consensus 77 -advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~ 153 (269)
T 4b93_B 77 -LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGN 153 (269)
T ss_dssp -CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCC
T ss_pred -CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCC
Confidence 89999999999999999999999999999999999 78999999999999999999999999999999999 9999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 163 RVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 163 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
||||+|+..|+.+++++|++. +.+.+.++..|.||||+|+..+
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQH-GASINASNNKGNTALHEAVIEK 196 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHT-TCCTTCBCTTSCBHHHHHHHTT
T ss_pred CHHHHHHHCCCHHHHHHHHHC-CCCCCccccCCCcHHHHHHHcC
Confidence 999999999999999999977 6667899999999999999855
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.7e-33 Score=217.34 Aligned_cols=187 Identities=15% Similarity=0.184 Sum_probs=156.7
Q ss_pred CchhhhcccHHHHHHHHhCCHHHHHHHHHcC---Ccccc---cccCCCCccHHHHHHHh---cCccccchhHHHHHHHHH
Q 027136 8 GEDEYYVRYWPLYRMIEKNDWRGVEDFVTNH---PDALT---AKTVAPGSSTIFHAIVE---LLVDVESDEATCLLDKLA 78 (227)
Q Consensus 8 ~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~---~~~~~---~~~~~~g~t~L~~a~~~---~~~~~~~~~~~~~~~~Ll 78 (227)
.+..+..|.||||.|++.|+.+.++.|++.+ ...+. ...+..|.||||+|+.. |+. +++++|+
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~--------~~v~~Ll 77 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQN--------DTIALLL 77 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBC--------HHHHHHH
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCCh--------HHHHHHH
Confidence 3456778999999999999999999888742 11221 12267899999999987 999 9999999
Q ss_pred hcCCccc-------cc----cCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCC--------------CCChHHHH
Q 027136 79 SKVDPQT-------LA----RQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGG--------------LDTLPIHE 133 (227)
Q Consensus 79 ~~~~~~~-------~~----~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~--------------~g~t~l~~ 133 (227)
+.+ ++ ++ ..+..|.||||+|+..|+.+++++|++++++ ++.++. .|.||||+
T Consensus 78 ~~g--a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~ 154 (273)
T 2pnn_A 78 DVA--RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSL 154 (273)
T ss_dssp HHH--HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHH
T ss_pred Hhh--ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHH
Confidence 987 43 22 2567899999999999999999999999999 688876 79999999
Q ss_pred HHHcCChHHHHHHHh---hcCCCccccCCCCccHHHHHHHhCc---------HHHHHHHHHhCCCCc------ccccccc
Q 027136 134 AAYKGHKNTFQYLLE---VTHGVDIYSGNDGARVLLLLIAANL---------YDVALDLLKLHPTIG------RDSIDSR 195 (227)
Q Consensus 134 a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~L~~a~~~~~---------~~~~~~Ll~~~~~~~------~~~~~~g 195 (227)
|+..|+.+++++|++ .|++++ .++..|+||||+|+..++ .+++++|++.+.... +.+|..|
T Consensus 155 A~~~g~~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g 233 (273)
T 2pnn_A 155 AACTNQLAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKG 233 (273)
T ss_dssp HHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTS
T ss_pred HHHcCCHHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCC
Confidence 999999999999999 999999 999999999999999888 799999998844332 3589999
Q ss_pred ccHHHHHhhCC
Q 027136 196 RIVLNKLAQKP 206 (227)
Q Consensus 196 ~t~l~~a~~~~ 206 (227)
.||||+|+..+
T Consensus 234 ~TpL~~A~~~g 244 (273)
T 2pnn_A 234 LTPLALAASSG 244 (273)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHhC
Confidence 99999999844
No 34
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-32 Score=224.77 Aligned_cols=185 Identities=17% Similarity=0.093 Sum_probs=154.7
Q ss_pred cCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc
Q 027136 7 QGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL 86 (227)
Q Consensus 7 ~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 86 (227)
+.+.....|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ +++
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~-~~~~~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~ 73 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA-SPNVS-NVKVETPLHMAARAGHT--------EVAKYLLQNK--AKV 73 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTC-CSCCS-SSCCCCHHHHHHHHTCH--------HHHHHHHHHT--CCS
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHhCC--CCC
Confidence 344556778999999999999999999998875 44455 77889999999999999 9999999998 888
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHH
Q 027136 87 ARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLL 166 (227)
Q Consensus 87 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 166 (227)
+.++..|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|++.+++.+ ..+..|.||||
T Consensus 74 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~ 151 (437)
T 1n11_A 74 NAKAKDDQTPLHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-CMTKKGFTPLH 151 (437)
T ss_dssp SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-CCCCCCCCHHH
Confidence 88888999999999999999999999999988 68888899999999999999999999999888887 78888999999
Q ss_pred HHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 167 LLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 167 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
+|+..|+.+++++|++. +...+..+..|.||||+|+..+
T Consensus 152 ~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 190 (437)
T 1n11_A 152 VAAKYGKVRVAELLLER-DAHPNAAGKNGLTPLHVAVHHN 190 (437)
T ss_dssp HHHHTTCHHHHHHHHHT-TCCTTCCCSSCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999999877 5555688888999999988754
No 35
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-32 Score=210.99 Aligned_cols=177 Identities=22% Similarity=0.188 Sum_probs=88.0
Q ss_pred hcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCC
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEH 92 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 92 (227)
..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ .+++..+..
T Consensus 37 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~ 104 (285)
T 1wdy_A 37 EGGWTPLHNAVQMSREDIVELLLRHGA-DPVLR-KKNGATPFLLAAIAGSV--------KLLKLFLSKG--ADVNECDFY 104 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCBCTT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCC-CCccc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCccCcc
Confidence 344455555555555555555554443 22222 44455555555555555 5555555554 444445555
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCccccC----------CCCCChHHHHHHHcCChHHHHHHHhh-cCCCccccCCCC
Q 027136 93 GYTALFLCAGKGNLRALKVLVKCNPNLTNIR----------GGLDTLPIHEAAYKGHKNTFQYLLEV-THGVDIYSGNDG 161 (227)
Q Consensus 93 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g 161 (227)
|.||||+|+..++.+++++|++.+.+ ++.. +..|.||||+|+..|+.+++++|++. |.+++ ..+..|
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g 182 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN-ACDNMG 182 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTT-CCCTTS
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCC-ccCCCC
Confidence 55555555555555555555555444 2333 44455555555555555555555544 44444 445555
Q ss_pred ccHHHHHHHhCc----HHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 162 ARVLLLLIAANL----YDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 162 ~t~L~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
.||||.|+..++ .+++++|++. +.+.+.+|..|.||||+|+.
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 228 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVE 228 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHccccchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHH
Confidence 555555555554 4455555543 33334555555555555554
No 36
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.5e-33 Score=222.93 Aligned_cols=191 Identities=14% Similarity=0.111 Sum_probs=169.9
Q ss_pred CCCCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCC
Q 027136 3 NSDDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVD 82 (227)
Q Consensus 3 ~~~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~ 82 (227)
+.+.+.+..+..|.||||+|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+.
T Consensus 154 ~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-~~~~~-~~~g~t~L~~A~~~g~~--------~~v~~Ll~~~~ 223 (373)
T 2fo1_E 154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGA-DPTIY-NKSERSALHQAAANRDF--------GMMVYMLNSTK 223 (373)
T ss_dssp HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSCCC-CTTCCCHHHHHHHTTCH--------HHHHHHTTSHH
T ss_pred hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCC-CCccc-CCCCCCHHHHHHHCCCH--------HHHHHHHhcCc
Confidence 3455566777889999999999999999999999986 44455 88999999999999999 99999999761
Q ss_pred -ccccccCCCCCCcHHHHHHhcC---CHHHHHHHHHcCCCcccc--------CCCCCChHHHHHHHcCChHHHHHHHhhc
Q 027136 83 -PQTLARQDEHGYTALFLCAGKG---NLRALKVLVKCNPNLTNI--------RGGLDTLPIHEAAYKGHKNTFQYLLEVT 150 (227)
Q Consensus 83 -~~~~~~~~~~~~t~L~~a~~~~---~~~~~~~Ll~~~~~~~~~--------~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 150 (227)
..+++..+..|.||||+|+..+ +.+++++|++.+.+ ++. .+..|.||||+|+..|+.+++++|++.+
T Consensus 224 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 302 (373)
T 2fo1_E 224 LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK 302 (373)
T ss_dssp HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS
T ss_pred cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc
Confidence 1467888999999999999988 89999999999988 454 6778999999999999999999999886
Q ss_pred -CCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 151 -HGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 151 -~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
++++ .++..|+||||+|+..|+.+++++|++. +++.+.+|..|.|||++|+.++
T Consensus 303 ~~~~n-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 303 GSNKD-KQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp CCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTT
T ss_pred CCCcc-CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccCCCCCCCCHHHHHHHcC
Confidence 8898 9999999999999999999999999987 6677899999999999999843
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.2e-32 Score=217.59 Aligned_cols=187 Identities=13% Similarity=0.006 Sum_probs=166.2
Q ss_pred CCCCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCC
Q 027136 3 NSDDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVD 82 (227)
Q Consensus 3 ~~~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~ 82 (227)
+.+...+..+..|.||||+|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+
T Consensus 79 ~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g- 147 (351)
T 3utm_A 79 QHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGA-CVNAM-DLWQFTPLHEAASKNRV--------EVCSLLLSHG- 147 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHTTCH--------HHHHHHHHTT-
T ss_pred HcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC-
Confidence 3445556677889999999999999999999999976 45455 88899999999999999 9999999998
Q ss_pred ccccccC------------------------------------------------------CCCCCcHHHHHHhc---CC
Q 027136 83 PQTLARQ------------------------------------------------------DEHGYTALFLCAGK---GN 105 (227)
Q Consensus 83 ~~~~~~~------------------------------------------------------~~~~~t~L~~a~~~---~~ 105 (227)
++++.. +..|.||||+|+.. +.
T Consensus 148 -~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~ 226 (351)
T 3utm_A 148 -ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKR 226 (351)
T ss_dssp -CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTH
T ss_pred -CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccH
Confidence 555543 34567999999988 56
Q ss_pred HHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCC
Q 027136 106 LRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHP 185 (227)
Q Consensus 106 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 185 (227)
.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. +
T Consensus 227 ~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g 303 (351)
T 3utm_A 227 KQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-ALDSLGQTALHRAALAGHLQTCRLLLSY-G 303 (351)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHT-T
T ss_pred HHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHc-C
Confidence 8999999999999 79999999999999999999999999999999999 9999999999999999999999999977 6
Q ss_pred CCccccccccccHHHHHhh
Q 027136 186 TIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 186 ~~~~~~~~~g~t~l~~a~~ 204 (227)
.+.+.+|..|.||+++|..
T Consensus 304 ad~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 304 SDPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp CCTTCCCTTSCCHHHHSCH
T ss_pred CCCCCcCCCCCChhhhhhH
Confidence 6678999999999999843
No 38
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.5e-32 Score=219.02 Aligned_cols=182 Identities=11% Similarity=-0.031 Sum_probs=161.9
Q ss_pred chhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 9 EDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
+..+..|.||||+|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ ++ .
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~-d~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--~~--~ 79 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGV-SPTIQ-NRFGCTALHLACKFGCV--------DTAKYLASVG--EV--H 79 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHHCCH--------HHHHHHHHHC--CC--C
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-Ccccc-CCCCCcHHHHHHHcCCH--------HHHHHHHHCC--CC--c
Confidence 3456779999999999999999999999876 45566 88999999999999999 9999999999 53 3
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHc----CCCcccc-----------------CCCCCChHHHHHHHcC--ChHHHHH
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKC----NPNLTNI-----------------RGGLDTLPIHEAAYKG--HKNTFQY 145 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~----~~~~~~~-----------------~~~~g~t~l~~a~~~~--~~~~~~~ 145 (227)
.+..|.||||+|+..|+.+++++|++. +.+ ++. .+..|.||||+|+..| +.+++++
T Consensus 80 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~ 158 (364)
T 3ljn_A 80 SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKI 158 (364)
T ss_dssp CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 345789999999999999999999999 666 455 7889999999999999 9999999
Q ss_pred HHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCC----ccccccccccHHHHHhhCC
Q 027136 146 LLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTI----GRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 146 Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~~ 206 (227)
|++.|++++ ..+..|.||||+|+..|+.+++++|++.+... .+.+|..|.||||+|+..+
T Consensus 159 Ll~~ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 159 LVQLGASPT-AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp HHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred HHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 999999999 99999999999999999999999999885441 6788999999999999855
No 39
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.7e-32 Score=200.14 Aligned_cols=160 Identities=19% Similarity=0.116 Sum_probs=129.7
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
..+..|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ ++++..
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~ 97 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFD-KLEDK-DIEGSTALIWAVKNNRL--------GIAEKLLSKG--SNVNTK 97 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHHT--CCTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhcc-ccccc-cccCccHHHHHHHcCCH--------HHHHHHHHCC--CCCCCC
Confidence 345667888888888888888888888765 34344 67788888888888888 8888888888 777788
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLI 169 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~ 169 (227)
+..|.||||+|+..++.+++++|++++++ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGLTAEASAR 175 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHH
Confidence 88888888888888888888888888887 67788888888888888888888888888888888 78888888888888
Q ss_pred HhCcHHHHHHHHHh
Q 027136 170 AANLYDVALDLLKL 183 (227)
Q Consensus 170 ~~~~~~~~~~Ll~~ 183 (227)
..|+.+++++|++.
T Consensus 176 ~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 176 IFGRQEVIKIFTEV 189 (192)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HhCcHHHHHHHHhc
Confidence 88888888888765
No 40
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=7.1e-33 Score=212.34 Aligned_cols=192 Identities=17% Similarity=0.164 Sum_probs=159.5
Q ss_pred hhcccHHHHHHHHhCCHHHHHHHHH----cCCcccccc---cCCCCccHHHHHH---HhcCccccchhHHHHHHHHHhcC
Q 027136 12 YYVRYWPLYRMIEKNDWRGVEDFVT----NHPDALTAK---TVAPGSSTIFHAI---VELLVDVESDEATCLLDKLASKV 81 (227)
Q Consensus 12 ~~~~~~~L~~a~~~g~~~~v~~ll~----~~~~~~~~~---~~~~g~t~L~~a~---~~~~~~~~~~~~~~~~~~Ll~~~ 81 (227)
+..+.++||.|++.|+.+.++.+++ .+. .++.. .+..|.||||+|+ ..|+. +++++|++.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~-~~~~~~~~~~~~g~t~L~~A~~~~~~g~~--------~~v~~Ll~~g 72 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKK-RLTDEEFREPSTGKTCLPKALLNLSAGRN--------DTIPILLDIA 72 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTC-CTTSGGGSCTTTCCCHHHHHHTSCBTTBC--------THHHHHHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCC-CcchhhhhccCCCCcHHHHHHHHhhcCCH--------HHHHHHHHhc
Confidence 3468899999999999997666665 554 33222 1367999999999 67999 9999999987
Q ss_pred Cccc-----------cccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC--------------CCCChHHHHHHH
Q 027136 82 DPQT-----------LARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG--------------GLDTLPIHEAAY 136 (227)
Q Consensus 82 ~~~~-----------~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~g~t~l~~a~~ 136 (227)
++ .+..|..|.||||+|+..|+.+++++|++++++ ++..+ ..|.||||+|+.
T Consensus 73 --~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 149 (260)
T 3jxi_A 73 --EKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAAC 149 (260)
T ss_dssp --HHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHH
T ss_pred --ccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHH
Confidence 33 344556899999999999999999999999999 68887 689999999999
Q ss_pred cCChHHHHHHHh---hcCCCccccCCCCccHHHHHHHhCc---------HHHHHHHHHhCCCCc------cccccccccH
Q 027136 137 KGHKNTFQYLLE---VTHGVDIYSGNDGARVLLLLIAANL---------YDVALDLLKLHPTIG------RDSIDSRRIV 198 (227)
Q Consensus 137 ~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~L~~a~~~~~---------~~~~~~Ll~~~~~~~------~~~~~~g~t~ 198 (227)
.|+.+++++|++ .|++++ .++..|+||||+|+..++ .+++++|++.+.... +.+|..|.||
T Consensus 150 ~g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tp 228 (260)
T 3jxi_A 150 TNQPHIVHYLTENGHKQADLR-RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP 228 (260)
T ss_dssp TTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCH
T ss_pred cCCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCH
Confidence 999999999999 899999 999999999999998877 689999998843321 5799999999
Q ss_pred HHHHhhCCCcCCCCCcchhHhhhhh
Q 027136 199 LNKLAQKPYAFASGSRLGRLQRLIY 223 (227)
Q Consensus 199 l~~a~~~~~~~~~~~~~~~~~~~~~ 223 (227)
||+|+.. ....+.+.|+-
T Consensus 229 L~~A~~~-------g~~~~v~~Ll~ 246 (260)
T 3jxi_A 229 LMMAAKT-------GKIGIFQHIIR 246 (260)
T ss_dssp HHHHHHT-------TCHHHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHH
Confidence 9999994 44555555543
No 41
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=7.1e-32 Score=193.53 Aligned_cols=158 Identities=14% Similarity=0.117 Sum_probs=148.9
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
.|.||||.|+..|+.+.++.+++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ .+++..+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~g 69 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN-VINHT-DEEGFTPLMWAAAHGQI--------AVVEFLLQNG--ADPQLLGKGR 69 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCTTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC-CcCCC-CCCCCCHHHHHHHCCCH--------HHHHHHHHcC--CCCCCcCCCC
Confidence 47899999999999999999999975 45556 88999999999999999 9999999999 8899999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCc
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANL 173 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~ 173 (227)
.||||+|+..++.+++++|++++++ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-IETDSGYNSMDLAVALGY 147 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCc
Confidence 9999999999999999999999999 79999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHhCC
Q 027136 174 YDVALDLLKLHP 185 (227)
Q Consensus 174 ~~~~~~Ll~~~~ 185 (227)
.+++++|++...
T Consensus 148 ~~~~~~L~~~~~ 159 (167)
T 3v31_A 148 RSVQQVIESHLL 159 (167)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998743
No 42
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.5e-31 Score=192.38 Aligned_cols=159 Identities=23% Similarity=0.169 Sum_probs=147.3
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQD 90 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~ 90 (227)
....+.++|+.|++.|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ .+++..+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~ 77 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGA-DVNAE-DASGWTPLHLAAFNGHL--------EIVEVLLKNG--ADVNAVD 77 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCccC
Confidence 34567899999999999999999999876 45455 88999999999999999 9999999999 8899999
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHH
Q 027136 91 EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIA 170 (227)
Q Consensus 91 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~ 170 (227)
..|.||||+|+..++.+++++|++++++ ++.++..|.||||+|+..++.+++++|++.|++++ .++..|.|||++|+.
T Consensus 78 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 78 HAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-AQDKFGKTAFDISID 155 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999 78999999999999999999999999999999999 999999999999999
Q ss_pred hCcHHHHHHHHHh
Q 027136 171 ANLYDVALDLLKL 183 (227)
Q Consensus 171 ~~~~~~~~~Ll~~ 183 (227)
.++.+++++|++.
T Consensus 156 ~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 156 NGNEDLAEILQKL 168 (169)
T ss_dssp TTCHHHHHHHHTC
T ss_pred hCCHHHHHHHHHc
Confidence 9999999999865
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.6e-31 Score=200.21 Aligned_cols=169 Identities=18% Similarity=0.172 Sum_probs=156.8
Q ss_pred CCCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc
Q 027136 4 SDDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP 83 (227)
Q Consensus 4 ~~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~ 83 (227)
.+...+..+..|.||||.|+..|+.++++.|++.++..++.. +..|.||||+|+..++. +++++|++.+
T Consensus 47 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~~~~Ll~~g-- 115 (223)
T 2f8y_A 47 ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR-MHDGTTPLILAARLAVE--------GMLEDLINSH-- 115 (223)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCC-CTTCCCHHHHHHHHTCH--------HHHHHHHHTT--
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCcHHHHHHHhCcH--------HHHHHHHHcC--
Confidence 344555667889999999999999999999999987666566 88999999999999999 9999999999
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCcc
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGAR 163 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 163 (227)
.+++..+..|.||||+|+..++.+++++|++++++ ++.++..|.||||+|+..++.+++++|++.|++++ .++..|.|
T Consensus 116 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t 193 (223)
T 2f8y_A 116 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRD-ITDHMDRL 193 (223)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCC
T ss_pred CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-cccccCCC
Confidence 88999999999999999999999999999999999 79999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhCcHHHHHHHHHhCC
Q 027136 164 VLLLLIAANLYDVALDLLKLHP 185 (227)
Q Consensus 164 ~L~~a~~~~~~~~~~~Ll~~~~ 185 (227)
||++|+..++.+++++|++.+.
T Consensus 194 ~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 194 PRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHhcchHHHHHHHHcCC
Confidence 9999999999999999997744
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.2e-31 Score=192.73 Aligned_cols=142 Identities=20% Similarity=0.198 Sum_probs=135.7
Q ss_pred cHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHH
Q 027136 52 STIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPI 131 (227)
Q Consensus 52 t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 131 (227)
++|+.|++.|+. +++++|++.| ++++.+|..|.||||+|+..++.+++++|++.+++ ++.+|..|.|||
T Consensus 6 ~~L~~Aa~~G~~--------~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpL 74 (169)
T 4gpm_A 6 KRLIEAAENGNK--------DRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPL 74 (169)
T ss_dssp HHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred HHHHHHHHcCCH--------HHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHH
Confidence 479999999999 9999999999 99999999999999999999999999999999999 799999999999
Q ss_pred HHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 132 HEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 132 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. +.+.+.+|..|+|||++|+.++
T Consensus 75 h~A~~~g~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcC
Confidence 99999999999999999999999 9999999999999999999999999977 6667899999999999999854
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1e-32 Score=222.20 Aligned_cols=180 Identities=12% Similarity=0.055 Sum_probs=163.9
Q ss_pred hcccHHHHHHHHhCCHHHHHHHH--------HcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcc
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFV--------TNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQ 84 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll--------~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~ 84 (227)
..|.||||+|+..|+.++++.|+ +.+. .++.. +..|.||||+|+..|+. +++++|++.+ +
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga-~vn~~-d~~g~TpL~~A~~~g~~--------~iv~~Ll~~g--a 190 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA-DVNAM-DCDENTPLMLAVLARRR--------RLVAYLMKAG--A 190 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC-CTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--C
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCC-CCcCC-CCCCCCHHHHHHHcChH--------HHHHHHHHCC--C
Confidence 57999999999999998888776 4444 55566 88999999999999999 9999999999 8
Q ss_pred ccccCCCCCCcHHHHHHhcCCHHHHHHHHHcC---CCccccCCCCCChHHHHHHHcC---ChHHHHHHHhhcCCCccc--
Q 027136 85 TLARQDEHGYTALFLCAGKGNLRALKVLVKCN---PNLTNIRGGLDTLPIHEAAYKG---HKNTFQYLLEVTHGVDIY-- 156 (227)
Q Consensus 85 ~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~g~t~l~~a~~~~---~~~~~~~Ll~~~~~~~~~-- 156 (227)
+++..+..|.||||+|+..|+.+++++|++.+ .+ ++..+..|.||||+|+..+ +.+++++|++.|++++ .
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~-~~~ 268 (373)
T 2fo1_E 191 DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD-YDG 268 (373)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSS-CCS
T ss_pred CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcc-ccc
Confidence 99999999999999999999999999999987 56 6889999999999999998 8999999999999987 4
Q ss_pred ------cCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 157 ------SGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 157 ------~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.+..|.||||+|+..|+.+++++|++.++.+.+.+|..|.||||+|+..+
T Consensus 269 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 269 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcC
Confidence 56789999999999999999999999987888999999999999999854
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-32 Score=208.01 Aligned_cols=185 Identities=14% Similarity=0.072 Sum_probs=163.0
Q ss_pred CchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCc----
Q 027136 8 GEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDP---- 83 (227)
Q Consensus 8 ~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~---- 83 (227)
.+..+..|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+..
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~~~~~~~~ 107 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGC-DPELR-DFRGNTPLHLACEQGCL--------ASVGVLTQSCTTPHLH 107 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCC-CSCCC-CTTCCCHHHHHHHHTCH--------HHHHHHHHSTTTTSSS
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCc-CCCCCCHHHHHHHcCCH--------HHHHHHHhcccchhHH
Confidence 45667789999999999999999999998876 45455 88999999999999999 999999999821
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCC-CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCc
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGG-LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGA 162 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 162 (227)
..++..+..|.||||+|+..|+.+++++|++++++ ++.++. .|.||||+|+..|+.+++++|++.|++++ .++..|.
T Consensus 108 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~ 185 (236)
T 1ikn_D 108 SILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN-RVTYQGY 185 (236)
T ss_dssp CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC-CCCTTCC
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccCCCC
Confidence 22567788899999999999999999999999999 688887 99999999999999999999999999999 9999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHhCCC-CccccccccccHHHHHhh
Q 027136 163 RVLLLLIAANLYDVALDLLKLHPT-IGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 163 t~L~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~g~t~l~~a~~ 204 (227)
||||+|+..++.+++++|++.+.. ....++..|.||.+.+..
T Consensus 186 tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 186 SPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred CHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 999999999999999999988553 234778889999887654
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-32 Score=216.36 Aligned_cols=182 Identities=14% Similarity=0.020 Sum_probs=148.3
Q ss_pred CCCCCcCch-hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcC---ccccchhHHHHHHHH
Q 027136 2 INSDDQGED-EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELL---VDVESDEATCLLDKL 77 (227)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~---~~~~~~~~~~~~~~L 77 (227)
++.+.+.+. .+..|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+ . ++++.|
T Consensus 117 ~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga-d~n~~-d~~g~TpLh~A~~~g~~~~~--------~~~~~l 186 (327)
T 1sw6_A 117 PNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS-NRLYG-DNMGESCLVKAVKSVNNYDS--------GTFEAL 186 (327)
T ss_dssp TTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTBC-CTTCCCHHHHHHHSSHHHHT--------TCHHHH
T ss_pred HhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCc-CCCCCCHHHHHHHhcccccH--------HHHHHH
Confidence 445555566 67889999999999999999999999986 55566 8899999999999998 7 677777
Q ss_pred HhcCCccccccCCCCCCcHHHHHHh----cCCHHHHHHHHHc--------------------CCCccccCCCCCChHHHH
Q 027136 78 ASKVDPQTLARQDEHGYTALFLCAG----KGNLRALKVLVKC--------------------NPNLTNIRGGLDTLPIHE 133 (227)
Q Consensus 78 l~~~~~~~~~~~~~~~~t~L~~a~~----~~~~~~~~~Ll~~--------------------~~~~~~~~~~~g~t~l~~ 133 (227)
++.+ ..+++.++..|.||||+|+. .|+.+++++|++. +.+ ++.++..|.||||+
T Consensus 187 l~~~-~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~-~~~~~~~g~t~L~~ 264 (327)
T 1sw6_A 187 LDYL-YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK-PNDKNGERKDSILE 264 (327)
T ss_dssp HHHH-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHH
T ss_pred HHhh-hccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC-cccccccCCChhHH
Confidence 7775 25688899999999999998 8999999999987 666 68899999999999
Q ss_pred HHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 134 AAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
|+. +++|++. +++ .++..|+||||+|+..|+.+++++|++. +++.+.+|..|+||||+|+++
T Consensus 265 a~~------~~~Ll~~--~~n-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 265 NLD------LKWIIAN--MLN-AQDSNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HCS------HHHHHHH--TTT-CCCTTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC-
T ss_pred HHH------HHHHHHh--CCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhc
Confidence 985 8889988 466 8899999999999999999999999977 677789999999999999874
No 48
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=3.7e-32 Score=194.62 Aligned_cols=159 Identities=19% Similarity=0.138 Sum_probs=146.8
Q ss_pred hhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCC
Q 027136 12 YYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDE 91 (227)
Q Consensus 12 ~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~ 91 (227)
+..+.++|+.|++.|+.+.++.+++..+...... +..|.||||+|+..|+. +++++|++.+ .+++.++.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~ 73 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI-EGRQSTPLHFAAGYNRV--------SVVEYLLQHG--ADVHAKDK 73 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT-TTTCCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCT
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc-ccCCCCHHHHHHHcChH--------HHHHHHHhcC--CCCCccCC
Confidence 4568899999999999999999998776555455 78899999999999999 9999999999 88999999
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHh
Q 027136 92 HGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAA 171 (227)
Q Consensus 92 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 171 (227)
.|.||||+|+..++.+++++|++++.+ ++.+|..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+.
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~a~~- 150 (165)
T 3twr_A 74 GGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-KKNRDGNTPLDLVKD- 150 (165)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTGGGSCT-
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCChhHhHhc-
Confidence 999999999999999999999999999 79999999999999999999999999999999999 999999999999877
Q ss_pred CcHHHHHHHHHhC
Q 027136 172 NLYDVALDLLKLH 184 (227)
Q Consensus 172 ~~~~~~~~Ll~~~ 184 (227)
++.+++++|++.+
T Consensus 151 ~~~~i~~~L~~~g 163 (165)
T 3twr_A 151 GDTDIQDLLRGDA 163 (165)
T ss_dssp TCHHHHHHHHTC-
T ss_pred CChHHHHHHhhcc
Confidence 8899999999763
No 49
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=1.1e-31 Score=202.23 Aligned_cols=170 Identities=14% Similarity=0.145 Sum_probs=151.3
Q ss_pred CCcCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCccc----ccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhc
Q 027136 5 DDQGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDAL----TAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASK 80 (227)
Q Consensus 5 ~~~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~----~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~ 80 (227)
+...+..+..|.||||+|+..|+.++++.|++.++... ... +..|.||||+|+..|+. +++++|++.
T Consensus 27 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~ 97 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSE-LYEGQTALHIAVINQNV--------NLVRALLAR 97 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCST-TTTTCCHHHHHHHTTCH--------HHHHHHHHT
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccccccc-CCCCcCHHHHHHHcCCH--------HHHHHHHhC
Confidence 44556677889999999999999999999999987532 223 67899999999999999 999999999
Q ss_pred CCccccccCCC-------------CCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHH----
Q 027136 81 VDPQTLARQDE-------------HGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTF---- 143 (227)
Q Consensus 81 ~~~~~~~~~~~-------------~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~---- 143 (227)
+ ++++..+. .|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..++.+++
T Consensus 98 g--~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~ 174 (232)
T 2rfa_A 98 G--ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMY 174 (232)
T ss_dssp T--CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHH
T ss_pred C--CCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHH
Confidence 9 77776654 799999999999999999999999999 799999999999999999999888
Q ss_pred HHHHhhcCCCc-----cccCCCCccHHHHHHHhCcHHHHHHHHHhCCC
Q 027136 144 QYLLEVTHGVD-----IYSGNDGARVLLLLIAANLYDVALDLLKLHPT 186 (227)
Q Consensus 144 ~~Ll~~~~~~~-----~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~ 186 (227)
++|++.|++.. +.++..|+||||+|+..|+.+++++|+++++.
T Consensus 175 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 175 NLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999998873 27899999999999999999999999988544
No 50
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=2.7e-31 Score=210.88 Aligned_cols=181 Identities=19% Similarity=0.160 Sum_probs=155.2
Q ss_pred hcccHHHHHHHHhCCHHHHHHHHHcCCcc--------------------------------cccccCCCCccHHHHHHHh
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFVTNHPDA--------------------------------LTAKTVAPGSSTIFHAIVE 60 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll~~~~~~--------------------------------~~~~~~~~g~t~L~~a~~~ 60 (227)
..|.||||+|+..|+.++++.|++.+... ++.. +..|.||||+|+..
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~g~t~l~~A~~~ 135 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNEC-DFYGFTAFMEAAVY 135 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCB-CTTCCBHHHHHHHT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhh-ccCCCCHHHHHHHc
Confidence 45889999999999999999988876421 2223 67788999999999
Q ss_pred cCccccchhHHHHHHHHHhcCCcccccc----------CCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCccccCCCCCCh
Q 027136 61 LLVDVESDEATCLLDKLASKVDPQTLAR----------QDEHGYTALFLCAGKGNLRALKVLVKC-NPNLTNIRGGLDTL 129 (227)
Q Consensus 61 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~----------~~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t 129 (227)
|+. +++++|++.+ ++++. .+..|.||||+|+..|+.+++++|+++ +.+ ++.++..|.|
T Consensus 136 ~~~--------~~~~~ll~~g--a~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~~g~t 204 (337)
T 4g8k_A 136 GKV--------KALKFLYKRG--ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRN 204 (337)
T ss_dssp TCH--------HHHHHHHHTT--CCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCTTSCC
T ss_pred CcH--------HHHHHHHHcC--CCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCCCCCc
Confidence 999 9999999998 55543 345689999999999999999999975 777 7999999999
Q ss_pred HHHHHHHcCC----hHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 130 PIHEAAYKGH----KNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 130 ~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
|++.++..+. ..++++|++.|++++ .++..|+||||+|+..|+.++++.|++..+.+.+.+|..|+||||+|+..
T Consensus 205 ~l~~~~~~~~~~~~~~i~~lLl~~gad~n-~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 205 ALIHALLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHHHTTCCTT-CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHHHHcCcccHHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 9998877654 358899999999999 99999999999999999999999999887888899999999999999985
Q ss_pred C
Q 027136 206 P 206 (227)
Q Consensus 206 ~ 206 (227)
+
T Consensus 284 g 284 (337)
T 4g8k_A 284 K 284 (337)
T ss_dssp T
T ss_pred C
Confidence 5
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=1.6e-31 Score=190.63 Aligned_cols=156 Identities=17% Similarity=0.175 Sum_probs=145.0
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
...+|||.|+..|+.+.++.|++.+. .++.+ +..|.||||+|+. |+. +++++|++.+ .+++.++..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~-~~~~~-~~~g~t~L~~A~~-~~~--------~~v~~Ll~~g--~~~~~~~~~g 70 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNV-NVNAQ-NGFGRTALQVMKL-GNP--------EIARRLLLRG--ANPDLKDRTG 70 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCC-CTTCC-CTTSCCHHHHCCS-SCH--------HHHHHHHHTT--CCTTCCCTTS
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCC-Ccccc-CccCccHHHHHHc-CcH--------HHHHHHHHcC--CCCCCCCCCC
Confidence 45699999999999999999998876 45455 8889999999999 999 9999999999 8899999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCC-ccccCCCCccHHHHHHHhC
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGV-DIYSGNDGARVLLLLIAAN 172 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~~~g~t~L~~a~~~~ 172 (227)
.||||+|+..++.+++++|++++.+ ++.++..|.||||+|+..|+.+++++|++.|++. + ..+..|.||||+|+..|
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG-HRNHKGDTACDLARLYG 148 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC-CcCCCCCcHHHHHHHcC
Confidence 9999999999999999999999998 7999999999999999999999999999999984 6 89999999999999999
Q ss_pred cHHHHHHHHHhC
Q 027136 173 LYDVALDLLKLH 184 (227)
Q Consensus 173 ~~~~~~~Ll~~~ 184 (227)
+.+++++|++.+
T Consensus 149 ~~~~~~~Ll~~G 160 (162)
T 1ihb_A 149 RNEVVSLMQANG 160 (162)
T ss_dssp CHHHHHHHHHTC
T ss_pred CHHHHHHHHHhC
Confidence 999999999874
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=4.4e-31 Score=186.81 Aligned_cols=151 Identities=17% Similarity=0.095 Sum_probs=142.1
Q ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCC
Q 027136 15 RYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGY 94 (227)
Q Consensus 15 ~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 94 (227)
..++|+.|++.|+.+.++.|++.+... .. +..|.||||+|+..|+. +++++|++.+ .+++..+..|.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~--~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~g~ 68 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF--TT-DWLGTSPLHLAAQYGHF--------STTEVLLRAG--VSRDARTKVDR 68 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC--CC-CTTCCCHHHHHHHHTCH--------HHHHHHHTTT--CCTTCCCTTCC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC--Cc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCCCCCCCC
Confidence 468999999999999999999998633 23 78899999999999999 9999999999 88999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcH
Q 027136 95 TALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLY 174 (227)
Q Consensus 95 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~ 174 (227)
||||+|+..++.+++++|++++++ ++.++..|.||||+|+..++.+++++|++.|++++ .++..|.||||+|+..|+.
T Consensus 69 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 69 TPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCH
Confidence 999999999999999999999999 79999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHH
Q 027136 175 DVALDL 180 (227)
Q Consensus 175 ~~~~~L 180 (227)
+++++|
T Consensus 147 ~i~~~L 152 (153)
T 1awc_B 147 DLAEIL 152 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999976
No 53
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=2.9e-32 Score=211.00 Aligned_cols=178 Identities=12% Similarity=0.109 Sum_probs=160.3
Q ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCc-ccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcc-ccccCCCC
Q 027136 15 RYWPLYRMIEKNDWRGVEDFVTNHPD-ALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQ-TLARQDEH 92 (227)
Q Consensus 15 ~~~~L~~a~~~g~~~~v~~ll~~~~~-~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~-~~~~~~~~ 92 (227)
..+++|.|+..|+.+.++.++....+ .++.+ +..|.||||+|+..|+. +++++|++.+ + +++..+..
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~-d~~g~T~Lh~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~~ 144 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIA-DSNGNTALHYSVSHANF--------PVVQQLLDSG--VCKVDKQNRA 144 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTS--CCCTTCCCTT
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCC-CCCCCCHHHHHHHCCCH--------HHHHHHHHCC--CCcCCCCCCC
Confidence 45778889999999999988876543 24444 88999999999999999 9999999999 5 88899999
Q ss_pred CCcHHHHHH-----hcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHH
Q 027136 93 GYTALFLCA-----GKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLL 167 (227)
Q Consensus 93 ~~t~L~~a~-----~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 167 (227)
|.||||+|+ ..++.+++++|++.+.. .+..+..|.||||+|+..|+.+++++|++.|++++ .++..|+||||+
T Consensus 145 g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~d~~G~TpLh~ 222 (276)
T 4hbd_A 145 GYSPIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDGSTALMC 222 (276)
T ss_dssp SCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHH
Confidence 999999999 67889999999999987 68888899999999999999999999999999999 999999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 168 LIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 168 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
|+..|+.+++++|++..+.+.+.+|..|.||||+|+..
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 99999999999999856888889999999999999984
No 54
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=1.4e-31 Score=194.19 Aligned_cols=161 Identities=15% Similarity=0.110 Sum_probs=149.5
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
.+.++|+.|+..|+.+.++.+++.++..++.. +..|.||||+|+..|+. +++++|++.+ ++++..+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~g 72 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQG-DDHGFSPLHWACREGRS--------AVVEMLIMRG--ARINVMNRGD 72 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCccccccc-CCCCCCHHHHHHHcCcH--------HHHHHHHHcC--CCCCCcCCCC
Confidence 47799999999999999999999977667666 88999999999999999 9999999999 8899999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCc
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANL 173 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~ 173 (227)
.||||+|+..++.+++++|++++++ ++.+|..|.||||+|+..++.+++++|++.|++++ .++..|.|||++|+..++
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 73 DTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS-ICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-BCCTTSCCGGGGSCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-hhccCCCCcHHHHHHHHH
Confidence 9999999999999999999999999 79999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHhCCCC
Q 027136 174 YDVALDLLKLHPTI 187 (227)
Q Consensus 174 ~~~~~~Ll~~~~~~ 187 (227)
.+++++|++.+...
T Consensus 151 ~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 151 ELLRERAEKMGQNL 164 (179)
T ss_dssp HHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhhcCc
Confidence 99999999774443
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.98 E-value=4.5e-31 Score=187.20 Aligned_cols=154 Identities=21% Similarity=0.184 Sum_probs=143.8
Q ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCC
Q 027136 15 RYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGY 94 (227)
Q Consensus 15 ~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 94 (227)
+.++||.|+..|+.+.++.+++..+..++.. +..|.||||+ +..|+. +++++|++.+ ++++.++..|.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~-~~~~~~--------~~v~~Ll~~g--~~~~~~~~~g~ 69 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDAL-NRFGKTALQV-MMFGST--------AIALELLKQG--ASPNVQDTSGT 69 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCC-CTTSCCHHHH-SCTTCH--------HHHHHHHHTT--CCTTCCCTTSC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCcccc-CCCCCcHHHH-HHcCCH--------HHHHHHHHCC--CCCCCcCCCCC
Confidence 5699999999999999999999854455555 8889999999 999999 9999999999 88999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcH
Q 027136 95 TALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLY 174 (227)
Q Consensus 95 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~ 174 (227)
||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++. ++++ .++..|.||||+|+..|+.
T Consensus 70 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 70 SPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSCCHHHHHHHSCCH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCCCHHHHHHHcCcH
Confidence 999999999999999999999998 799999999999999999999999999999 8888 9999999999999999999
Q ss_pred HHHHHHHHh
Q 027136 175 DVALDLLKL 183 (227)
Q Consensus 175 ~~~~~Ll~~ 183 (227)
+++++|+++
T Consensus 147 ~~v~~Ll~~ 155 (156)
T 1bd8_A 147 DLVDILQGH 155 (156)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999864
No 56
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=5.3e-31 Score=194.29 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=150.1
Q ss_pred cCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc
Q 027136 7 QGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL 86 (227)
Q Consensus 7 ~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 86 (227)
..+..+..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ +.++
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~l~~A~~~~~~--------~~~~~Ll~~~-~~~~ 99 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA-DINLQ-NSISDSPYLYAGAQGRT--------EILAYMLKHA-TPDL 99 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHHS-CCCT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHhcc-Cccc
Confidence 445566789999999999999999999999976 45455 88899999999999999 9999999655 2788
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCccccCCCCCChHHHHHHHcCC-----hHHHHHHHhhcCCCccccCCC
Q 027136 87 ARQDEHGYTALFLCAGKGNLRALKVLVKCN-PNLTNIRGGLDTLPIHEAAYKGH-----KNTFQYLLEVTHGVDIYSGND 160 (227)
Q Consensus 87 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~Ll~~~~~~~~~~~~~ 160 (227)
+..+..|.||||+|+..++.+++++|++.+ .+ ++.++..|.||||+|+..+. .+++++|++.|++++ .++..
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~-~~~~~ 177 (201)
T 3hra_A 100 NKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED-IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS-IKDNS 177 (201)
T ss_dssp TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC-TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT-CCCTT
T ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC-ccCCC
Confidence 899999999999999999999999999999 66 79999999999999999998 899999999999999 99999
Q ss_pred CccHHHHHHHhCcHHHHHHHHHh
Q 027136 161 GARVLLLLIAANLYDVALDLLKL 183 (227)
Q Consensus 161 g~t~L~~a~~~~~~~~~~~Ll~~ 183 (227)
|+||||+|+..|+.+++++|++.
T Consensus 178 g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 178 GRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHhHHHHHHhc
Confidence 99999999999999999999965
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=4.2e-31 Score=204.43 Aligned_cols=164 Identities=18% Similarity=0.211 Sum_probs=151.9
Q ss_pred chhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHH-----HhcCccccchhHHHHHHHHHhcCCc
Q 027136 9 EDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAI-----VELLVDVESDEATCLLDKLASKVDP 83 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~-----~~~~~~~~~~~~~~~~~~Ll~~~~~ 83 (227)
+..+..|.||||+|+..|+.++++.|++.+...++.. +..|.||||+|+ ..++. +++++|++.+
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~g~tpL~~a~~~~~~~~~~~--------~~v~~Ll~~g-- 173 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ-NRAGYSPIMLTALATLKTQDDI--------ETVLQLFRLG-- 173 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC-CTTSCCHHHHGGGCCCCSHHHH--------HHHHHHHHHS--
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC-CCCCCCHHHHHHHHHhhhhhhH--------HHHHHHHHcC--
Confidence 3446679999999999999999999999987566566 889999999999 66777 9999999999
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHh-hcCCCccccCCCCc
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLE-VTHGVDIYSGNDGA 162 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~ 162 (227)
...+..+..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++ .|++++ .++..|+
T Consensus 174 ~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~-~~d~~g~ 251 (276)
T 4hbd_A 174 NINAKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS-LTDRDGS 251 (276)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT-CCCTTSC
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc-CcCCCCC
Confidence 77888889999999999999999999999999999 79999999999999999999999999999 899999 9999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHhCC
Q 027136 163 RVLLLLIAANLYDVALDLLKLHP 185 (227)
Q Consensus 163 t~L~~a~~~~~~~~~~~Ll~~~~ 185 (227)
||||+|+..|+.+++++|+++.+
T Consensus 252 TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 252 TALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHhccC
Confidence 99999999999999999998843
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.3e-31 Score=203.91 Aligned_cols=179 Identities=12% Similarity=0.089 Sum_probs=147.1
Q ss_pred hhhcccHHHHHHHHh---CCHHHHHHHHHcCCcc------ccc---ccCCCCccHHHHHHHhcCccccchhHHHHHHHHH
Q 027136 11 EYYVRYWPLYRMIEK---NDWRGVEDFVTNHPDA------LTA---KTVAPGSSTIFHAIVELLVDVESDEATCLLDKLA 78 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~---g~~~~v~~ll~~~~~~------~~~---~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll 78 (227)
.+..|.||||+|+.. |+.++++.|++.+... ++. ..+..|.||||+|+..|+. +++++|+
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~--------~~v~~Ll 121 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNM--------TLVTLLV 121 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCH--------HHHHHHH
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCH--------HHHHHHH
Confidence 356799999999987 9999999999986421 111 1156899999999999999 9999999
Q ss_pred hcCCccccccCCC--------------CCCcHHHHHHhcCCHHHHHHHHH---cCCCccccCCCCCChHHHHHHHcCC--
Q 027136 79 SKVDPQTLARQDE--------------HGYTALFLCAGKGNLRALKVLVK---CNPNLTNIRGGLDTLPIHEAAYKGH-- 139 (227)
Q Consensus 79 ~~~~~~~~~~~~~--------------~~~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~a~~~~~-- 139 (227)
+.+ ++++..+. .|.||||+|+..|+.+++++|++ .+.+ ++.+|..|.||||+|+..++
T Consensus 122 ~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~ 198 (273)
T 2pnn_A 122 ENG--ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNT 198 (273)
T ss_dssp HTT--CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSC
T ss_pred HCC--CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcc
Confidence 999 88888886 79999999999999999999999 8898 79999999999999999998
Q ss_pred -------hHHHHHHHhhcCCCc------cccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHH
Q 027136 140 -------KNTFQYLLEVTHGVD------IYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLN 200 (227)
Q Consensus 140 -------~~~~~~Ll~~~~~~~------~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~ 200 (227)
.+++++|++.|++++ ..++..|+||||+|+..|+.+++++|++.+..+.......+.+|.+
T Consensus 199 ~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 199 VDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred hhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 799999999999986 1489999999999999999999999999977677677666666643
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.7e-31 Score=204.22 Aligned_cols=162 Identities=14% Similarity=0.093 Sum_probs=146.5
Q ss_pred hhhcccHHHHHHHHh---CCHHHHHHHHHcCCcccc----------cccCCCCccHHHHHHHhcCccccchhHHHHHHHH
Q 027136 11 EYYVRYWPLYRMIEK---NDWRGVEDFVTNHPDALT----------AKTVAPGSSTIFHAIVELLVDVESDEATCLLDKL 77 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~---g~~~~v~~ll~~~~~~~~----------~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~L 77 (227)
.+..|.||||+|+.. |+.++++.|++.+..... .+ +..|.||||+|+..|+. +++++|
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~-d~~g~t~L~~A~~~g~~--------~~v~~L 109 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDE-FYQGHSALHIAIEKRSL--------QCVKLL 109 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCST-TTTTCCHHHHHHHTTCH--------HHHHHH
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccc-cccCCCHHHHHHHcCCH--------HHHHHH
Confidence 567899999999999 999999999988653210 11 46799999999999999 999999
Q ss_pred HhcCCccccccCCCC-------------CCcHHHHHHhcCCHHHHHHHHH---cCCCccccCCCCCChHHHHHHH--cCC
Q 027136 78 ASKVDPQTLARQDEH-------------GYTALFLCAGKGNLRALKVLVK---CNPNLTNIRGGLDTLPIHEAAY--KGH 139 (227)
Q Consensus 78 l~~~~~~~~~~~~~~-------------~~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~a~~--~~~ 139 (227)
++.+ ++++..+.. |.||||+|+..|+.+++++|++ .+++ ++.+|..|.||||+|+. .++
T Consensus 110 l~~g--a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~ 186 (256)
T 2etb_A 110 VENG--ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNS 186 (256)
T ss_dssp HHTT--CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSC
T ss_pred HHcC--CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCC
Confidence 9999 888888876 9999999999999999999999 8998 79999999999999999 778
Q ss_pred hH-------HHHHHHhhcCCC-------ccccCCCCccHHHHHHHhCcHHHHHHHHHhCC
Q 027136 140 KN-------TFQYLLEVTHGV-------DIYSGNDGARVLLLLIAANLYDVALDLLKLHP 185 (227)
Q Consensus 140 ~~-------~~~~Ll~~~~~~-------~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 185 (227)
.+ ++++|++.|+++ + .++..|+||||+|+..|+.+++++|++++.
T Consensus 187 ~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~-~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 187 PENSALVIHMYDGLLQMGARLCPTVQLEE-ISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCGGG-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCccccccccc-ccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 88 999999999998 7 899999999999999999999999998843
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.7e-30 Score=190.52 Aligned_cols=147 Identities=17% Similarity=0.105 Sum_probs=140.0
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
+..|.||||+|+..|+. +++++|++.+ .+++..+..|.||||+|+..++.+++++|++.+++ ++.++..
T Consensus 32 d~~g~t~L~~A~~~g~~--------~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 100 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGME--------NAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFS 100 (192)
T ss_dssp CTTCCCHHHHHHHHTCG--------GGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTT
T ss_pred CCCCCCHHHHHHHcCCH--------HHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCC
Confidence 88899999999999999 9999999998 88999999999999999999999999999999999 7999999
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|.||||+|+..++.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++. +.+.+.+|..|.||+++|+..+
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhC
Confidence 9999999999999999999999999999 9999999999999999999999999977 6667899999999999999843
No 61
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=3.3e-30 Score=194.60 Aligned_cols=179 Identities=16% Similarity=0.161 Sum_probs=159.1
Q ss_pred hcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC-CC
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ-DE 91 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~-~~ 91 (227)
..+.++|+.|+..|+.+.++.|++.+. .++.. +..|.||||+|+..|+. +++++|++.+ .+++.. +.
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~~--~~~~~~~~~ 74 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGY-DVRQP-DKENVTLLHWAAINNRI--------DLVKYYISKG--AIVDQLGGD 74 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCBTT
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCC-CcCCC-CCCCCCHHHHHHHhCCH--------HHHHHHHHcC--CcchhhcCC
Confidence 457899999999999999999999886 45455 78899999999999999 9999999999 666544 45
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHh
Q 027136 92 HGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAA 171 (227)
Q Consensus 92 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 171 (227)
.|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHHHh
Confidence 589999999999999999999999998 68899999999999999999999999999999999 9999999999999977
Q ss_pred Cc-HHHHHHHHHhCCCCcccccc-ccccHHHHHhhCC
Q 027136 172 NL-YDVALDLLKLHPTIGRDSID-SRRIVLNKLAQKP 206 (227)
Q Consensus 172 ~~-~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~ 206 (227)
+. .+++++|++. +...+..+. .|.||||+|+..+
T Consensus 153 ~~~~~~~~~L~~~-~~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 153 THSVDPTRLLLTF-NVSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp CCSSTTHHHHHHT-TCCTTCCCTTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHHhc-CCCcchhhccCCCcHHHHHHHcC
Confidence 76 7888888866 555567776 8999999999844
No 62
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=3.8e-31 Score=202.67 Aligned_cols=161 Identities=12% Similarity=0.084 Sum_probs=144.5
Q ss_pred hcccHHHHHHH---HhCCHHHHHHHHHcCCc----------ccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHh
Q 027136 13 YVRYWPLYRMI---EKNDWRGVEDFVTNHPD----------ALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLAS 79 (227)
Q Consensus 13 ~~~~~~L~~a~---~~g~~~~v~~ll~~~~~----------~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~ 79 (227)
..|.||||+|+ ..|+.++++.|++.+.. ..... +..|.||||+|+..|+. +++++|++
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~-d~~g~t~L~~A~~~g~~--------~~v~~Ll~ 114 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDV-YYRGQTALHIAIERRCK--------HYVELLVE 114 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCS-SEESBCHHHHHHHTTCH--------HHHHHHHH
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccccc-ccCCCCHHHHHHHcCCH--------HHHHHHHh
Confidence 56999999999 77999999999997632 12122 45899999999999999 99999999
Q ss_pred cCCccccccCC--------------CCCCcHHHHHHhcCCHHHHHHHHH---cCCCccccCCCCCChHHHHHHHcCC---
Q 027136 80 KVDPQTLARQD--------------EHGYTALFLCAGKGNLRALKVLVK---CNPNLTNIRGGLDTLPIHEAAYKGH--- 139 (227)
Q Consensus 80 ~~~~~~~~~~~--------------~~~~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~a~~~~~--- 139 (227)
.+ ++++..+ ..|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+..++
T Consensus 115 ~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 115 KG--ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTR 191 (260)
T ss_dssp TT--CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSH
T ss_pred CC--CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCch
Confidence 99 8888888 589999999999999999999999 8898 79999999999999999887
Q ss_pred ------hHHHHHHHhhcCCC-------ccccCCCCccHHHHHHHhCcHHHHHHHHHhCCC
Q 027136 140 ------KNTFQYLLEVTHGV-------DIYSGNDGARVLLLLIAANLYDVALDLLKLHPT 186 (227)
Q Consensus 140 ------~~~~~~Ll~~~~~~-------~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~ 186 (227)
.+++++|++.|+++ + ..+..|+||||+|+..|+.+++++|+++++.
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~~~~~~~~-~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEA-LLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCGGG-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcccccccchhh-cccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 69999999999998 5 7999999999999999999999999998544
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=8.3e-30 Score=182.72 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=137.4
Q ss_pred CCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCC
Q 027136 49 PGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDT 128 (227)
Q Consensus 49 ~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 128 (227)
.|.||||.|+..|+. +++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.
T Consensus 2 ~~~t~L~~A~~~g~~--------~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 70 (167)
T 3v31_A 2 ANSLSVHQLAAQGEM--------LYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRE 70 (167)
T ss_dssp TTCCCHHHHHHTTCH--------HHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred CCcchHHHHHHCCCH--------HHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCC
Confidence 478999999999999 9999999999 88999999999999999999999999999999998 788999999
Q ss_pred hHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 129 LPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 129 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
||||+|+..++.+++++|++.|++++ ..+..|.||||+|+..++.+++++|++. +.+.+.+|..|.||+++|+..+
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLES-GADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999 9999999999999999999999999986 6666899999999999999843
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=7.9e-30 Score=181.81 Aligned_cols=145 Identities=21% Similarity=0.154 Sum_probs=136.8
Q ss_pred CCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCC
Q 027136 49 PGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDT 128 (227)
Q Consensus 49 ~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 128 (227)
...||||.|+..|+. +++++|++.+ .+++..+..|.||||+|+. ++.+++++|++.+.+ ++.++..|.
T Consensus 4 ~~~~~L~~A~~~g~~--------~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~ 71 (162)
T 1ihb_A 4 PWGNELASAAARGDL--------EQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGF 71 (162)
T ss_dssp -CHHHHHHHHHHTCH--------HHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred hHhhHHHHHHHcCCH--------HHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCC
Confidence 457999999999999 9999999999 8899999999999999999 999999999999998 799999999
Q ss_pred hHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 129 LPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 129 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++.+....+.+|..|.||||+|+.++
T Consensus 72 t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 72 AVIHDAARAGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 99999999999999999999999999 999999999999999999999999999977767899999999999999843
No 65
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=2.9e-29 Score=199.19 Aligned_cols=182 Identities=19% Similarity=0.170 Sum_probs=144.1
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccc-----
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQT----- 85 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~----- 85 (227)
...+|.|+||.|++.|++++|+.||+.+. .++.+.+..|.||||+|+..|+. +++++|++.+ ++
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Ga-dvn~~~~~~g~TpLh~A~~~g~~--------~iv~~Ll~~g--a~~~~~~ 89 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSRE--------DIVELLLRHG--ADPVLRK 89 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCC
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCcCHHHHHHHcCCH--------HHHHHHHHcC--Cchhhhc
Confidence 34567899999999999999999999987 45555345699999999999999 9999999987 44
Q ss_pred ----------------------------cccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCcccc----------CCCCC
Q 027136 86 ----------------------------LARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNI----------RGGLD 127 (227)
Q Consensus 86 ----------------------------~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~~g 127 (227)
++..+..|.||||+|+..|+.+++++|++++++ ++. .+..|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~-~~~~~~~~~~~~~~~~~g 168 (337)
T 4g8k_A 90 KNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGG 168 (337)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCC-----CTTCS
T ss_pred cCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCC-cchhhccccccccccCCC
Confidence 445667778888888888888888888888877 443 24457
Q ss_pred ChHHHHHHHcCChHHHHHHHh-hcCCCccccCCCCccHHHHHHHhCc----HHHHHHHHHhCCCCccccccccccHHHHH
Q 027136 128 TLPIHEAAYKGHKNTFQYLLE-VTHGVDIYSGNDGARVLLLLIAANL----YDVALDLLKLHPTIGRDSIDSRRIVLNKL 202 (227)
Q Consensus 128 ~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~L~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a 202 (227)
.||||+|+..|+.+++++|++ .|++++ ..+..|.|+++.++..+. .+++++|++. +.+.+.+|..|.||||+|
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILA 246 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHH
Confidence 888888888888888888885 478888 888888888887665433 3466767755 566678888888888888
Q ss_pred hhCC
Q 027136 203 AQKP 206 (227)
Q Consensus 203 ~~~~ 206 (227)
+..+
T Consensus 247 ~~~~ 250 (337)
T 4g8k_A 247 VEKK 250 (337)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8855
No 66
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=3.2e-30 Score=200.38 Aligned_cols=163 Identities=13% Similarity=0.043 Sum_probs=149.3
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
+|.||||+|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++..+..|
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~-d~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--a~~~~~~~~g 128 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGL-DDSQF-DDKGNTALYYAVDSGNM--------QTVKLFVKKN--WRLMFYGKTG 128 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHHC--GGGGGCSSSG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCc-CCCCCcHHHHHHHcCCH--------HHHHHHHhcC--CCCCccCCCC
Confidence 58999999999999999999999986 45455 88999999999999999 9999999999 9999999999
Q ss_pred -CcHHHHHHhcCCHHHHHHHHHcCCCccccCCC-CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccH-HHHHHH
Q 027136 94 -YTALFLCAGKGNLRALKVLVKCNPNLTNIRGG-LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARV-LLLLIA 170 (227)
Q Consensus 94 -~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~-L~~a~~ 170 (227)
.||||+|+..|+.+++++|++++++. .+. .|.||||+|+..|+.+++++|++.|++++ .++..|+|| ||+|+.
T Consensus 129 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 129 WKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN-TNNSLLFIPDIKLAID 204 (285)
T ss_dssp GGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-TTCCCBCCTTHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHcChHHHHHHHHHcCCCCC-cccCCCCChHHHHHHH
Confidence 89999999999999999999999873 333 89999999999999999999999999999 999999998 999999
Q ss_pred hCcHHHHHHHHHhCCCCcccccc
Q 027136 171 ANLYDVALDLLKLHPTIGRDSID 193 (227)
Q Consensus 171 ~~~~~~~~~Ll~~~~~~~~~~~~ 193 (227)
.++.+++++|++. +++.+.+|.
T Consensus 205 ~~~~~~v~~Ll~~-gad~~~~~~ 226 (285)
T 3kea_A 205 NKDIEMLQALFKY-DINIYSANL 226 (285)
T ss_dssp HTCHHHHHHHTTS-CBCSTTTTG
T ss_pred cCCHHHHHHHHHc-CCCCCCCCh
Confidence 9999999999977 666667764
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=3.5e-29 Score=179.91 Aligned_cols=147 Identities=19% Similarity=0.149 Sum_probs=137.3
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
...+.++|+.|+..|+. +++++|++.+ .+++..+..|.||||+|+..|+.+++++|++++.+ ++..+..
T Consensus 11 ~~~~~~~l~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 79 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRD--------DEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHA 79 (169)
T ss_dssp --CHHHHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCcccchHHHHHHcCCH--------HHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCC
Confidence 45568999999999999 9999999999 88999999999999999999999999999999998 6899999
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|++. +.+.+.+|..|.||+++|+..+
T Consensus 80 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 80 GMTPLRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNG 157 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhC
Confidence 9999999999999999999999999999 9999999999999999999999999987 5666799999999999999843
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.2e-30 Score=197.85 Aligned_cols=179 Identities=13% Similarity=-0.007 Sum_probs=130.6
Q ss_pred hcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCC
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEH 92 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 92 (227)
..|.||||.|++.|+.+.++.+++.+.... . +..|.||||.|+..|+. +++++|++.+ ++++..|..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~-~~~~~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~~~~d~~ 69 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK--F-NPLPLALLLDSSLEGEF--------DLVQRIIYEV--DDPSLPNDE 69 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCH--------HHHHHHTSTT--SSCCCCCTT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc--c-CchhhHHHHHHHHcCCH--------HHHHHHHHcC--CCCCCcCCC
Confidence 468999999999999999999999886332 2 56789999999999999 9999999999 889999999
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCc-cHHHHH--H
Q 027136 93 GYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGA-RVLLLL--I 169 (227)
Q Consensus 93 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t~L~~a--~ 169 (227)
|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|. ||||+| +
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEM 147 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHHHHh
Confidence 99999999999999999999999999 79999999999999999999999999999999999 7777776 999999 7
Q ss_pred HhCcHHHHHHHHHhCCCCcccc---------ccccccHHHHHhhCCC
Q 027136 170 AANLYDVALDLLKLHPTIGRDS---------IDSRRIVLNKLAQKPY 207 (227)
Q Consensus 170 ~~~~~~~~~~Ll~~~~~~~~~~---------~~~g~t~l~~a~~~~~ 207 (227)
..|+.+++++|++.+. ..... +..+.++.+++.+.+.
T Consensus 148 ~~g~~~~~~~Ll~~~a-~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 148 EEGYTQCSQFLYGVQE-KMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp STTCCCHHHHHHHHHH-HTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhccHHHHHHHHHhhh-cccccccceEEEEeccCCCCCCcccccCCC
Confidence 8899999999998733 33333 5667888888777664
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=5.2e-32 Score=204.01 Aligned_cols=180 Identities=13% Similarity=0.029 Sum_probs=157.3
Q ss_pred chhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 9 EDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 9 ~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
+.....+.+|||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++.
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-d~~g~tpLh~A~~~g~~--------~~v~~Ll~~g--a~~n~ 82 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMN-DPSQP-NEEGITALHNAICGANY--------SIVDFLITAG--ANVNS 82 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTC
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCC-CCCCC-CCCCCCHHHHHHHcCCH--------HHHHHHHHCC--CCCCC
Confidence 3445678899999999999999999999886 45556 88999999999999999 9999999999 89999
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC-CCCChHHHHH--HHcCChHHHHHHHhhcCCCccccCCCCccHH
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG-GLDTLPIHEA--AYKGHKNTFQYLLEVTHGVDIYSGNDGARVL 165 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 165 (227)
+|..|.||||+|+..|+.+++++|++.+++ ++..+ ..|.||||+| +..++.+++++|++.|++++ ..+..|.||+
T Consensus 83 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~~l 160 (229)
T 2vge_A 83 PDSHGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG-LMNSGAVYAL 160 (229)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT-TSGGGEEEES
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc-cccCCchHHH
Confidence 999999999999999999999999999999 57765 6999999999 99999999999999999999 8899999999
Q ss_pred HHHHHhCcHHHHHHHHHhCCCC--ccccccccccHHHHHhhCC
Q 027136 166 LLLIAANLYDVALDLLKLHPTI--GRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 166 ~~a~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~t~l~~a~~~~ 206 (227)
+.+..... .+.|++. +.. ...+|..|.||||+|+.++
T Consensus 161 ~~~~~~~~---~~~ll~~-ga~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 161 WDYSAEFG---DELSFRE-GESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp SCBCCSST---TBCCBCT-TCEEEEEESSCTTCSSEEEEEETT
T ss_pred HHHhhccc---cccCccc-cccccccccCCCcccHHHHHHHcC
Confidence 86555442 2455655 444 5678899999999999866
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.2e-29 Score=176.60 Aligned_cols=142 Identities=19% Similarity=0.165 Sum_probs=132.7
Q ss_pred ccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChH
Q 027136 51 SSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLP 130 (227)
Q Consensus 51 ~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 130 (227)
.++|+.|+..|+. +++++|++.+ .+++ .+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||
T Consensus 3 ~~~L~~A~~~g~~--------~~v~~Ll~~g--~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 70 (153)
T 1awc_B 3 GKKLLEAARAGQD--------DEVRILMANG--APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTP 70 (153)
T ss_dssp HHHHHHHHHHTCH--------HHHHHHHHHT--CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCH
T ss_pred cHHHHHHHHcCCH--------HHHHHHHHcC--CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 5899999999999 9999999999 5554 578899999999999999999999999998 78999999999
Q ss_pred HHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 131 IHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 131 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
||+|+..|+.+++++|++.|++++ .++..|+||||+|+..++.+++++|++. +.+.+.+|..|.||+++|+..+
T Consensus 71 L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 71 LHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHcChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcC
Confidence 999999999999999999999999 9999999999999999999999999987 6667799999999999999854
No 71
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=6.1e-29 Score=179.01 Aligned_cols=145 Identities=17% Similarity=0.170 Sum_probs=134.3
Q ss_pred CccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCCh
Q 027136 50 GSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTL 129 (227)
Q Consensus 50 g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 129 (227)
+.+|||.|+..|+. +++++|++.+ +..++..+..|.||||+|+..|+.+++++|++++++ ++..+..|.|
T Consensus 2 ~~~~L~~A~~~g~~--------~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 71 (172)
T 3v30_A 2 DSLSIHQLAAQGEL--------DQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERES 71 (172)
T ss_dssp --CCHHHHHHTTCH--------HHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCC
T ss_pred chhhHHHHHHcCCH--------HHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCC
Confidence 46899999999999 9999999998 334788899999999999999999999999999999 7999999999
Q ss_pred HHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 130 PIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 130 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|||+|+..++.+++++|++.|++++ ..+..|+||||+|+..++.+++++|++. +.+.+.+|..|.||||+|+..+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 72 ALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhC
Confidence 9999999999999999999999999 9999999999999999999999999987 5667899999999999999843
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=8.2e-29 Score=175.52 Aligned_cols=143 Identities=20% Similarity=0.127 Sum_probs=134.1
Q ss_pred CccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCCh
Q 027136 50 GSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTL 129 (227)
Q Consensus 50 g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 129 (227)
+.||||.|+..|+. +++++|++. .+.+++..+..|.||||+ +..|+.+++++|++.+.+ ++.++..|.|
T Consensus 2 ~~~~L~~A~~~g~~--------~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 70 (156)
T 1bd8_A 2 AGDRLSGAAARGDV--------QEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTS 70 (156)
T ss_dssp HHHHHHHHHHHTCH--------HHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred cchHHHHHHHhCCH--------HHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 46899999999999 999999998 347888999999999999 999999999999999999 7999999999
Q ss_pred HHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 130 PIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 130 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. .+.+.+|..|.||||+|+..+
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999 9999999999999999999999999977 666799999999999999843
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=5.2e-29 Score=178.20 Aligned_cols=146 Identities=15% Similarity=0.122 Sum_probs=135.6
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
+..|.+|||.|+..|+. +++++|++.+ +.+++..+..|.||||+|+..++.+++++|++++.+ ++.++..
T Consensus 5 ~~~~~~~l~~A~~~g~~--------~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 74 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDV--------ETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKG 74 (165)
T ss_dssp -CHHHHHHHHHHHHTCH--------HHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cchhhHHHHHHHHhCCH--------HHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCC
Confidence 56788999999999999 9999999976 367778888899999999999999999999999999 7999999
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
|.||||+|+..++.+++++|++.|++++ ..+..|+||||+|+..++.+++++|++. +.+.+.+|..|.||+++|..
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 75 GLVPLHNACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc
Confidence 9999999999999999999999999999 9999999999999999999999999977 66678999999999999765
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.5e-28 Score=178.16 Aligned_cols=145 Identities=19% Similarity=0.215 Sum_probs=133.7
Q ss_pred CCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCC
Q 027136 48 APGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLD 127 (227)
Q Consensus 48 ~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 127 (227)
..+.++||.|+..|+. +++++|++.+ +.+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|
T Consensus 3 ~~~~~~l~~A~~~g~~--------~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 72 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNA--------VAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGD 72 (179)
T ss_dssp ----CCHHHHHHHTCH--------HHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTC
T ss_pred HHHHHHHHHHHHcCCH--------HHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCC
Confidence 3567899999999999 9999999986 367889999999999999999999999999999999 79999999
Q ss_pred ChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 128 TLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|++. +.+.+.+|..|.||+++|+.
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 73 DTPLHLAASHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999977 66678999999999999976
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=6.1e-29 Score=176.40 Aligned_cols=146 Identities=18% Similarity=0.118 Sum_probs=118.9
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
+..|.||||+|+..|+. +++++|++.+ .+++..+..|.||||+|+ .++.+++++|++++.+ ++.++..
T Consensus 9 ~~~~~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~ 76 (156)
T 1bi7_B 9 MEPSADWLATAAARGRV--------EEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPA 76 (156)
T ss_dssp -CCSTTHHHHHHHHTCH--------HHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTT
T ss_pred CccchHHHHHHHHcCCH--------HHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCC
Confidence 67789999999999999 9999999999 889999999999999985 8999999999999999 7999999
Q ss_pred CCh-HHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 127 DTL-PIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 127 g~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
|.| |||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. +.+.+.++..|.||.+.+...
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~~~~~~~i 154 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGSNHARIDAAEGPSDI 154 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSC-C--------------------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCccCcCcCcccccCCCC
Confidence 999 9999999999999999999999999 9999999999999999999999999966 667789999999998866544
Q ss_pred C
Q 027136 206 P 206 (227)
Q Consensus 206 ~ 206 (227)
|
T Consensus 155 p 155 (156)
T 1bi7_B 155 P 155 (156)
T ss_dssp -
T ss_pred C
Confidence 3
No 76
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=6.3e-28 Score=188.24 Aligned_cols=173 Identities=17% Similarity=0.103 Sum_probs=149.3
Q ss_pred HHHHhCCHHHHHHHHHcCCccc-------ccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 21 RMIEKNDWRGVEDFVTNHPDAL-------TAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 21 ~a~~~g~~~~v~~ll~~~~~~~-------~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
.+++.+..+.++.++....... ....+..|.||||.|+..|+. +++++|++.+ .+++..+..|
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g 73 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDT--------EEVLRLLERG--ADINYANVDG 73 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCH--------HHHHHHHHHC--CCTTCBCTTC
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCH--------HHHHHHHHcC--CCCcccCCCC
Confidence 4677788888888887653211 111234578999999999999 9999999999 8899999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCcccc----------------
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYS---------------- 157 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~---------------- 157 (227)
.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|++.|++++ ..
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~ 151 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAM 151 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcch
Confidence 9999999999999999999999999 79999999999999999999999999999998865 33
Q ss_pred --------------------------------------------CCCCccHHHHHHHhCcHHHHHHHHHhCCCCcccccc
Q 027136 158 --------------------------------------------GNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSID 193 (227)
Q Consensus 158 --------------------------------------------~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 193 (227)
+..|.||||+|+..|+.+++++|++. +.+.+.+|.
T Consensus 152 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~ 230 (299)
T 1s70_B 152 EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA-RYDVNIKDY 230 (299)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCT
T ss_pred HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc-CCCCCCcCC
Confidence 24578999999999999999999976 666789999
Q ss_pred ccccHHHHHhhCC
Q 027136 194 SRRIVLNKLAQKP 206 (227)
Q Consensus 194 ~g~t~l~~a~~~~ 206 (227)
.|.||||+|+..+
T Consensus 231 ~g~tpL~~A~~~~ 243 (299)
T 1s70_B 231 DGWTPLHAAAHWG 243 (299)
T ss_dssp TCCCHHHHHHHTT
T ss_pred CCCcHHHHHHhcC
Confidence 9999999999855
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=2.5e-29 Score=183.37 Aligned_cols=160 Identities=8% Similarity=-0.008 Sum_probs=140.6
Q ss_pred hcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCC
Q 027136 13 YVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEH 92 (227)
Q Consensus 13 ~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 92 (227)
.+++++|+.|++.|+.+.++.++..+... ..+..|.||||+|+..++. +.+.+++++|++.| ++++.++..
T Consensus 4 ~~~~~~l~~Aa~~g~~~~~~~l~~~~~~~---~~~~~g~T~Lh~A~~~~~~----~~~~~iv~~Ll~~G--advn~~d~~ 74 (186)
T 3t8k_A 4 MSEYRTVSAAAMLGTYEDFLELFEKGYED---KESVLKSNILYDVLRNNND----EARYKISMFLINKG--ADIKSRTKE 74 (186)
T ss_dssp HHHCSSHHHHHHHSCHHHHHHHHHHSSSC---HHHHHTTTHHHHHTTCSCH----HHHHHHHHHHHHTT--CCSSCCCTT
T ss_pred cccccHHHHHHHcCCHHHHHHHHhcCccc---ccccCCCCHHHHHHHcCCc----chHHHHHHHHHHCC--CCCCCCCCC
Confidence 45789999999999999999999877533 2126799999999999975 11226999999999 999999999
Q ss_pred CCcHHHHHHhcCC------HHHHHHHHHcCCCccccCCCCCC-hHHHHHHHcCC-----hHHHHHHHh-hcCCCccccCC
Q 027136 93 GYTALFLCAGKGN------LRALKVLVKCNPNLTNIRGGLDT-LPIHEAAYKGH-----KNTFQYLLE-VTHGVDIYSGN 159 (227)
Q Consensus 93 ~~t~L~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a~~~~~-----~~~~~~Ll~-~~~~~~~~~~~ 159 (227)
|.||||+|+..++ .+++++|+++|++ ++.+|..|. ||||+|+..+. .+++++|++ .|++++ .++.
T Consensus 75 g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-~~d~ 152 (186)
T 3t8k_A 75 GTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKDK 152 (186)
T ss_dssp CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-CCCT
T ss_pred CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-ccCC
Confidence 9999999999886 6889999999999 799999999 99999999543 569999999 999999 9999
Q ss_pred CCccHHHHHHHhCcHHHHHHHHHh
Q 027136 160 DGARVLLLLIAANLYDVALDLLKL 183 (227)
Q Consensus 160 ~g~t~L~~a~~~~~~~~~~~Ll~~ 183 (227)
.|+||||+|+..++.+++++|++.
T Consensus 153 ~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 153 WGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp TSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999865
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=3.9e-28 Score=168.32 Aligned_cols=130 Identities=16% Similarity=0.102 Sum_probs=122.8
Q ss_pred ccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCcc
Q 027136 41 ALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLT 120 (227)
Q Consensus 41 ~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~ 120 (227)
.++.. +..|.||||+|+..|+. +++++|++.+ .+++.++..|.||||+|+. ++.+++++|++++++ +
T Consensus 4 ~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~ 70 (136)
T 1d9s_A 4 GIHML-GGSSDAGLATAAARGQV--------ETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-P 70 (136)
T ss_dssp CCSCC-CCCCSCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-S
T ss_pred CccCC-CCCCccHHHHHHHcCCH--------HHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-C
Confidence 34445 78899999999999999 9999999999 8899999999999999999 999999999999999 7
Q ss_pred ccCCCC-CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhC
Q 027136 121 NIRGGL-DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLH 184 (227)
Q Consensus 121 ~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~ 184 (227)
+.++.. |.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..++.+++++|++.+
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999 9999999999999999999999999999 99999999999999999999999999874
No 79
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.8e-26 Score=157.28 Aligned_cols=125 Identities=24% Similarity=0.319 Sum_probs=119.7
Q ss_pred CCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCC
Q 027136 49 PGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDT 128 (227)
Q Consensus 49 ~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 128 (227)
+|.||||+|+..|+. +++++|++.+ .+++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.
T Consensus 1 ~g~t~L~~A~~~~~~--------~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~ 69 (126)
T 1n0r_A 1 NGRTPLHLAARNGHL--------EVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGR 69 (126)
T ss_dssp CCCCHHHHHHHHTCH--------HHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred CCccHHHHHHHcCcH--------HHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCC
Confidence 589999999999999 9999999999 88899999999999999999999999999999998 789999999
Q ss_pred hHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCC
Q 027136 129 LPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHP 185 (227)
Q Consensus 129 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 185 (227)
||||+|+..++.+++++|++.|++++ .++..|.|||++|+..++.+++++|++.+.
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99999999999999999999999999 999999999999999999999999998753
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=1.1e-27 Score=169.98 Aligned_cols=144 Identities=17% Similarity=0.090 Sum_probs=116.6
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
.....|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+ .|+. +++++|++.+ ++++.+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~-~~~~--------~~v~~Ll~~g--~~~~~~ 73 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGA-NPNAP-NSYGRRPIQVMM-MGSA--------RVAELLLLHG--AEPNCA 73 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTC-CTTCC-CSSSCCTTTSSC-TTCH--------HHHHHHHTTT--CCCCCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHH-cCCH--------HHHHHHHHcC--CCCCCc
Confidence 345668999999999999999999999876 45556 889999999985 8999 9999999999 899999
Q ss_pred CCCCCc-HHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHH
Q 027136 90 DEHGYT-ALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLL 168 (227)
Q Consensus 90 ~~~~~t-~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a 168 (227)
+..|.| |||+|+..|+.+++++|++++++ ++.++..|.||||+|+..|+.+++++|++.|++++ .++..|.||.+-+
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-GSNHARIDAAEGP 151 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-ccCcCcCcccccC
Confidence 999999 99999999999999999999999 79999999999999999999999999999999999 9999999997743
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=6.4e-27 Score=162.19 Aligned_cols=125 Identities=24% Similarity=0.263 Sum_probs=119.2
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
...+.||||+|+..|+. +++++|++.+ .+++..|..|.||||+|+..++.+++++|++++++ ++.+|..
T Consensus 11 ~~~~~t~l~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~ 79 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQD--------DEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAI 79 (136)
T ss_dssp -CHHHHHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cccccHHHHHHHHhCCH--------HHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 55678999999999999 9999999999 88999999999999999999999999999999999 7999999
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHh
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKL 183 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~ 183 (227)
|.||||+|+..++.+++++|++.|++++ .++..|.||||+|+..++.+++++|++.
T Consensus 80 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 80 GFTPLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 9999999999999999999999999999 9999999999999999999999999965
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=6e-28 Score=181.78 Aligned_cols=160 Identities=14% Similarity=0.079 Sum_probs=136.1
Q ss_pred HHHHHcCCccc-ccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHH
Q 027136 32 EDFVTNHPDAL-TAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALK 110 (227)
Q Consensus 32 ~~ll~~~~~~~-~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~ 110 (227)
+.+++++.... ....+.+|.||||+|+..|+. +++++|++.+ ++++..|..|.||||+|+..|+.++++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~v~ 71 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGEL--------EVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSIVD 71 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCH--------HHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCH--------HHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 45666654221 122256778999999999999 9999999999 889999999999999999999999999
Q ss_pred HHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccC-CCCccHHHHH--HHhCcHHHHHHHHHhCCCC
Q 027136 111 VLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSG-NDGARVLLLL--IAANLYDVALDLLKLHPTI 187 (227)
Q Consensus 111 ~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~a--~~~~~~~~~~~Ll~~~~~~ 187 (227)
+|++.+++ ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+ ..|+||||+| +..++.+++++|++. +.+
T Consensus 72 ~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~ 148 (229)
T 2vge_A 72 FLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF-ATTLSDGATAFEKCDPYREGYADCATYLADV-EQS 148 (229)
T ss_dssp HHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHH
T ss_pred HHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-cccCCCCCCHHHHHHHHhcChHHHHHHHHHc-CCC
Confidence 99999999 79999999999999999999999999999999999 665 6999999999 999999999999988 556
Q ss_pred ccccccccccHHHHHhh
Q 027136 188 GRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 188 ~~~~~~~g~t~l~~a~~ 204 (227)
.+.+|..|.||++.++.
T Consensus 149 ~~~~~~~~~~~l~~~~~ 165 (229)
T 2vge_A 149 MGLMNSGAVYALWDYSA 165 (229)
T ss_dssp TTTSGGGEEEESSCBCC
T ss_pred cccccCCchHHHHHHhh
Confidence 67889999999986544
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=3.8e-27 Score=163.31 Aligned_cols=132 Identities=16% Similarity=0.067 Sum_probs=122.0
Q ss_pred cCchhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccc
Q 027136 7 QGEDEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTL 86 (227)
Q Consensus 7 ~~~~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 86 (227)
..+..+..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+. ++. +++++|++.+ +++
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~-~~~--------~~v~~Ll~~g--~~~ 70 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGA-DPNAL-NRFGRRPIQVMMM-GSA--------QVAELLLLHG--AEP 70 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTCCTTTTTSTT-SCH--------HHHHHHHHHT--CCS
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC-CcCCc-CCCCCCHHHHHHc-CCH--------HHHHHHHHCC--CCC
Confidence 345566789999999999999999999999976 45556 8899999999999 999 9999999999 889
Q ss_pred ccCCCC-CCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q 027136 87 ARQDEH-GYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHG 152 (227)
Q Consensus 87 ~~~~~~-~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 152 (227)
+.++.. |.||||+|+..++.+++++|++++++ ++.+|..|.||||+|+..++.+++++|++.|++
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999 99999999999999999999999999 799999999999999999999999999999875
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=6.6e-27 Score=177.19 Aligned_cols=142 Identities=13% Similarity=0.066 Sum_probs=100.5
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
...|.||||.|+..++. ++++.|++.+ .+++.. ..+.||||.|+..|+.+++++|++.+++ ++.+|..
T Consensus 2 ~~~g~t~L~~a~~~~~~--------~~~~~ll~~g--~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~ 69 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLR--------KTGSERIAHG--MRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDE 69 (239)
T ss_dssp ----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTT
T ss_pred CccccccCchhhhhhhH--------HHHHHHhccC--CCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCC
Confidence 45689999999999999 9999999999 777654 5789999999999999999999999998 7999999
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccc-cHHHHH
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRR-IVLNKL 202 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a 202 (227)
|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. +.+.+.++..|. ||+|+|
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHH
Confidence 9999999999999999999999999999 9999999999999999999999999987 555567777666 999998
No 85
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=2.5e-27 Score=187.50 Aligned_cols=168 Identities=11% Similarity=0.051 Sum_probs=131.7
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHH
Q 027136 18 PLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTAL 97 (227)
Q Consensus 18 ~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L 97 (227)
.+|.|+..+..++++.+++.+. .++...+..|.||||+|+..|+. +++++|++.+ ++++.++..|.|||
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~-dvn~~~d~~g~TpLh~Aa~~g~~--------~~v~~Ll~~G--ad~n~~d~~g~TpL 168 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQL-NLNIPVDEHGNTPLHWLTSIANL--------ELVKHLVKHG--SNRLYGDNMGESCL 168 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCC-CSCSCCSTTCCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTBCCTTCCCHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCC-CcccccCCCCCcHHHHHHHcCCH--------HHHHHHHHcC--CCCCCcCCCCCCHH
Confidence 3577777777777777776665 55552388999999999999999 9999999999 99999999999999
Q ss_pred HHHHhcCC---HHHHHHHHHcCCCccccCCCCCChHHHHHHH----cCChHHHHHHHhh--------------------c
Q 027136 98 FLCAGKGN---LRALKVLVKCNPNLTNIRGGLDTLPIHEAAY----KGHKNTFQYLLEV--------------------T 150 (227)
Q Consensus 98 ~~a~~~~~---~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~----~~~~~~~~~Ll~~--------------------~ 150 (227)
|+|+..|+ .++++.|++.+...++.++..|.||||+|+. .|+.+++++|++. |
T Consensus 169 h~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g 248 (327)
T 1sw6_A 169 VKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 248 (327)
T ss_dssp HHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----
T ss_pred HHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhccc
Confidence 99999998 6778888887633378899999999999999 8999999999987 7
Q ss_pred CCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 151 HGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 151 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
++++ .++..|.||||.|+. +++|++. ..+.+|..|+||||+|+.++
T Consensus 249 ~~~~-~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g 294 (327)
T 1sw6_A 249 SKPN-DKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLG 294 (327)
T ss_dssp ------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHC
T ss_pred CCcc-cccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcC
Confidence 7888 899999999999985 8889877 46788999999999999844
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=8.3e-26 Score=156.53 Aligned_cols=127 Identities=17% Similarity=0.161 Sum_probs=116.7
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQD 90 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~ 90 (227)
....+.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..++. +++++|++.+ ++++..|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--~~~~~~d 77 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGA-DVNAK-DEYGLTPLYLATAHGHL--------EIVEVLLKNG--ADVNAVD 77 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCC-CCCCc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCcCC
Confidence 34668899999999999999999999976 45455 88899999999999999 9999999999 8899999
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhc
Q 027136 91 EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVT 150 (227)
Q Consensus 91 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 150 (227)
..|.||||+|+..++.+++++|++++++ ++.+|..|.||||+|+..++.+++++|++.|
T Consensus 78 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 78 AIGFTPLHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999 7899999999999999999999999999865
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.6e-25 Score=152.56 Aligned_cols=126 Identities=22% Similarity=0.262 Sum_probs=117.8
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHG 93 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 93 (227)
+|.||||.|+..|+.++++.|++.+. .++.. +..|.||||+|+..++. +++++|++.+ .+++.++..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~-~~~g~t~L~~A~~~~~~--------~~~~~Ll~~g--~~~~~~~~~g 68 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAK-DKNGRTPLHLAARNGHL--------EVVKLLLEAG--ADVNAKDKNG 68 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTTS
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC-CCCCc-CCCCCcHHHHHHHcCcH--------HHHHHHHHcC--CCCcccCCCC
Confidence 48899999999999999999999876 44455 78899999999999999 9999999999 8899999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q 027136 94 YTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHG 152 (227)
Q Consensus 94 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 152 (227)
.||||+|+..++.+++++|++++++ ++.++..|.|||++|+..++.+++++|++.|++
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 69 RTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999 789999999999999999999999999999874
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=9.6e-27 Score=169.66 Aligned_cols=143 Identities=10% Similarity=-0.088 Sum_probs=125.9
Q ss_pred CccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCC-CCCCcHHHHHHhcCCH----HHHHHHHHcCCCccccCC
Q 027136 50 GSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQD-EHGYTALFLCAGKGNL----RALKVLVKCNPNLTNIRG 124 (227)
Q Consensus 50 g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~~t~L~~a~~~~~~----~~~~~Ll~~~~~~~~~~~ 124 (227)
+.++|+.|++.|+. +.++.+++.+ ++..+ ..|.||||+|+..++. +++++|+++|++ ++.++
T Consensus 6 ~~~~l~~Aa~~g~~--------~~~~~l~~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d 72 (186)
T 3t8k_A 6 EYRTVSAAAMLGTY--------EDFLELFEKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRT 72 (186)
T ss_dssp HCSSHHHHHHHSCH--------HHHHHHHHHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCC
T ss_pred cccHHHHHHHcCCH--------HHHHHHHhcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCC
Confidence 35789999999999 9999888877 34444 6799999999999975 599999999999 79999
Q ss_pred CCCChHHHHHHHcCC------hHHHHHHHhhcCCCccccCCCCc-cHHHHHHHh-----CcHHHHHHHHHhCCCCccccc
Q 027136 125 GLDTLPIHEAAYKGH------KNTFQYLLEVTHGVDIYSGNDGA-RVLLLLIAA-----NLYDVALDLLKLHPTIGRDSI 192 (227)
Q Consensus 125 ~~g~t~l~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~g~-t~L~~a~~~-----~~~~~~~~Ll~~~~~~~~~~~ 192 (227)
..|+||||+|+..++ .+++++|++.|++++ .++..|+ ||||+|+.. +..+++++|++..+.+.+.+|
T Consensus 73 ~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 73 KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 999999999999987 578999999999999 9999999 999999984 346789999984578889999
Q ss_pred cccccHHHHHhhCC
Q 027136 193 DSRRIVLNKLAQKP 206 (227)
Q Consensus 193 ~~g~t~l~~a~~~~ 206 (227)
..|.||||+|++.+
T Consensus 152 ~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 152 KWGLTALEFVKRCQ 165 (186)
T ss_dssp TTSCCHHHHHHTTT
T ss_pred CCCCCHHHHHHHcC
Confidence 99999999999854
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.9e-26 Score=158.35 Aligned_cols=125 Identities=19% Similarity=0.208 Sum_probs=108.0
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
+..|.||||+|+..|+. +++++|++.+ .+++.++..|.||||+|+..++.+++++|++++.+ ++.++..
T Consensus 7 ~~~g~t~L~~A~~~~~~--------~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~ 75 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDI--------PSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQ 75 (137)
T ss_dssp CTTCCCHHHHHHHHTCH--------HHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGG
T ss_pred CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCC
Confidence 77889999999999999 9999999988 78888888899999999999999999999999888 6888888
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHh
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKL 183 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~ 183 (227)
|.||||+|+..++.+++++|++.|++++ .++..|.|||++|+..+..+++++|.+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 9999999999999999999999999888 8888999999999888877777766543
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=6e-25 Score=159.80 Aligned_cols=141 Identities=15% Similarity=0.060 Sum_probs=125.3
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQD 90 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~ 90 (227)
.+..|.||||.|+..|+.+.++.|++ +. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++.++
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~-d~~g~t~L~~A~~~~~~--------~~v~~Ll~~g--a~~~~~~ 106 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DR-DVDAV-DENGRTALLFVAGLGSD--------KCVRLLAEAG--ADLDHRD 106 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TS-CTTCC-CTTSCCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cC-CCCCc-CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCcCC
Confidence 35678999999999999999999998 44 55566 88999999999999999 9999999999 8898888
Q ss_pred -CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHH
Q 027136 91 -EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLI 169 (227)
Q Consensus 91 -~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~ 169 (227)
..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..++ ...+.++|++|+
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~ 167 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILK------------------TTPKGNPMQFGR 167 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHH
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHH
Confidence 8899999999999999999999999999 79999999999999986432 234689999999
Q ss_pred HhCcHHHHHHHHHh
Q 027136 170 AANLYDVALDLLKL 183 (227)
Q Consensus 170 ~~~~~~~~~~Ll~~ 183 (227)
..|..+++++|.++
T Consensus 168 ~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 168 RIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HcCHHHHHHHHHHh
Confidence 99999999998754
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=4.4e-25 Score=172.55 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=122.2
Q ss_pred CccHHHHHHHhcCccccchhHHHHHHHHHhcCCcccccc------CCCCCCcHHHHHHhc---CCHHHHHHHHHcCCCcc
Q 027136 50 GSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLAR------QDEHGYTALFLCAGK---GNLRALKVLVKCNPNLT 120 (227)
Q Consensus 50 g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~------~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~ 120 (227)
+.++|+.|+..|+. +.++.|++.+ .+++. .+..|.||||+|+.. ++.+++++|++++++ +
T Consensus 151 ~~~~L~~A~~~g~~--------~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-v 219 (301)
T 2b0o_E 151 EPQRLWTAICNRDL--------LSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-L 219 (301)
T ss_dssp CHHHHHHHHHTTCH--------HHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-T
T ss_pred hHHHHhhhhhccCH--------HHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-C
Confidence 34679999999999 9999999999 77776 588999999999987 899999999999999 7
Q ss_pred ccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHH
Q 027136 121 NIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLN 200 (227)
Q Consensus 121 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~ 200 (227)
+.+|..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..++.+++++|++.+.. .|.||||
T Consensus 220 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh 291 (301)
T 2b0o_E 220 DAKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLH 291 (301)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhH
Confidence 9999999999999999999999999999999999 9999999999999999999999999987332 5899999
Q ss_pred HHhhCCC
Q 027136 201 KLAQKPY 207 (227)
Q Consensus 201 ~a~~~~~ 207 (227)
+|+..+.
T Consensus 292 ~A~~~g~ 298 (301)
T 2b0o_E 292 VDYSWVI 298 (301)
T ss_dssp -------
T ss_pred HHHhcCC
Confidence 9998654
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=6.6e-25 Score=166.69 Aligned_cols=142 Identities=15% Similarity=0.079 Sum_probs=127.7
Q ss_pred hhhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 10 DEYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 10 ~~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
+.+..|.||||.|++.|+.++++.|++ +. .++.+ +..|.||||+|+..|+. +++++|++.+ ++++.+
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~-d~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--a~~~~~ 106 (244)
T 3ui2_A 40 DVVSEYETPWWTAARKADEQALSQLLE-DR-DVDAV-DENGRTALLFVAGLGSD--------KCVRLLAEAG--ADLDHR 106 (244)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHTTT-TC-CTTCB-CTTSCBHHHHHHHHTCH--------HHHHHHHHTT--CCTTCC
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHc-CC-CCCCc-CCCCCCHHHHHHHCCCH--------HHHHHHHHcC--CCCCcC
Confidence 445679999999999999999999998 44 56566 88999999999999999 9999999999 889888
Q ss_pred C-CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHH
Q 027136 90 D-EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLL 168 (227)
Q Consensus 90 ~-~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a 168 (227)
+ ..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+.. .....+.|||++|
T Consensus 107 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~------------------~~~~~~~~~l~~a 167 (244)
T 3ui2_A 107 DMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREI------------------LKTTPKGNPMQFG 167 (244)
T ss_dssp CSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH------------------HTTCCCSSHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHH------------------HhccCCCCHHHHH
Confidence 8 7899999999999999999999999999 799999999999999852 2235589999999
Q ss_pred HHhCcHHHHHHHHHh
Q 027136 169 IAANLYDVALDLLKL 183 (227)
Q Consensus 169 ~~~~~~~~~~~Ll~~ 183 (227)
+..|+.+++++|++.
T Consensus 168 ~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 168 RRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHh
Confidence 999999999999975
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3.2e-25 Score=150.93 Aligned_cols=113 Identities=19% Similarity=0.200 Sum_probs=88.3
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
+..|.||||+|+..|+. +++++|++.+ .+++..+..|.||||+|+..++.+++++|++.+++ ++.+|..
T Consensus 4 ~~~~~~~l~~A~~~~~~--------~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~ 72 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDL--------DEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKH 72 (123)
T ss_dssp ---CHHHHHHHHHTTCH--------HHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTT
T ss_pred ccccchHHHHHHHcCCH--------HHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 45667888888888888 8888888877 67777777888888888888888888888888877 6777888
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHh
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAA 171 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 171 (227)
|.||||+|+..++.+++++|++.|++++ .++..|.||||+|...
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDNQ 116 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhCCH
Confidence 8888888888888888888888888877 7788888888877443
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=2e-25 Score=167.05 Aligned_cols=136 Identities=17% Similarity=0.132 Sum_probs=115.1
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCccccCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKC-NPNLTNIRGG 125 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~ 125 (227)
+..|.||||+|+..|+. +++++|++.+ .+++.++..|.||||+|+..|+.+++++|++. +.+ ++.+|.
T Consensus 70 ~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~ 138 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNL--------SWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNK 138 (222)
T ss_dssp EEEESCHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCT
T ss_pred ccccccccccccccCcH--------HHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCC
Confidence 45678999999999999 9999999999 88999999999999999999999999999999 888 799999
Q ss_pred CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCcccccccc
Q 027136 126 LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSR 195 (227)
Q Consensus 126 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 195 (227)
.|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..+..++++.|+.. +.....++..+
T Consensus 139 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~~~~~ 206 (222)
T 3ehr_A 139 LGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLSNAED 206 (222)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhccchhh
Confidence 99999999999999999999999999999 9999999999999999999999999976 44444555443
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2e-24 Score=149.70 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=108.5
Q ss_pred cccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCcc
Q 027136 84 QTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGAR 163 (227)
Q Consensus 84 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 163 (227)
.++ .++..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++.|++++ .++..|+|
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t 78 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-TTGYQNDS 78 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCGGGCC
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-CcCCCCCC
Confidence 344 6788999999999999999999999999998 79999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 164 VLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 164 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
|||+|+..++.+++++|++. +.+.+.+|..|.||+++|+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhh
Confidence 99999999999999999977 66678999999999999875
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=170.25 Aligned_cols=139 Identities=21% Similarity=0.132 Sum_probs=120.4
Q ss_pred cHHHHHHHHhCCHHHHHHHHHcCCcccccc-----cCCCCccHHHHHHHh---cCccccchhHHHHHHHHHhcCCccccc
Q 027136 16 YWPLYRMIEKNDWRGVEDFVTNHPDALTAK-----TVAPGSSTIFHAIVE---LLVDVESDEATCLLDKLASKVDPQTLA 87 (227)
Q Consensus 16 ~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~L~~a~~~---~~~~~~~~~~~~~~~~Ll~~~~~~~~~ 87 (227)
.++|+.|+..|+.+.++.++..+.+ ++.. .+..|.||||+|+.. ++. +++++|++.+ ++++
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~--------~iv~~Ll~~g--advn 220 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASL--------PLVDFIIQNG--GHLD 220 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTH--------HHHHHHHHHS--SCTT
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcH--------HHHHHHHhcC--CCCC
Confidence 4679999999999999999988764 3331 277899999999998 788 9999999999 8999
Q ss_pred cCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHH
Q 027136 88 RQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLL 167 (227)
Q Consensus 88 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 167 (227)
.+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.|||++|+..++.+++++|++.|++ .|.||||+
T Consensus 221 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~ 292 (301)
T 2b0o_E 221 AKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHV 292 (301)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHH
Confidence 9999999999999999999999999999999 799999999999999999999999999998876 37899999
Q ss_pred HHHhCc
Q 027136 168 LIAANL 173 (227)
Q Consensus 168 a~~~~~ 173 (227)
|+..|+
T Consensus 293 A~~~g~ 298 (301)
T 2b0o_E 293 DYSWVI 298 (301)
T ss_dssp ------
T ss_pred HHhcCC
Confidence 998876
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=2.5e-24 Score=156.54 Aligned_cols=127 Identities=18% Similarity=0.168 Sum_probs=115.4
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC-C
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG-G 125 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~ 125 (227)
+..|.||||+|+..|+. +++++|++ + .+++.+|..|.||||+|+..|+.+++++|++++++ ++.++ .
T Consensus 41 ~~~g~t~L~~A~~~g~~--------~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~ 108 (183)
T 3deo_A 41 VSEYETPWWTAARKADE--------QALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMR 108 (183)
T ss_dssp HHHHHHHHHHHHHTTCH--------HHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSS
T ss_pred CCCCCCHHHHHHHcCCH--------HHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 45688999999999999 99999999 7 88999999999999999999999999999999999 67777 8
Q ss_pred CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 126 LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 126 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
.|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..++. ..+.+++++|++
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~ 168 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILKT------------------TPKGNPMQFGRR 168 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHH
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHhccC------------------cccccHHHHHHH
Confidence 89999999999999999999999999999 9999999999999875422 346788998887
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=8.9e-27 Score=186.90 Aligned_cols=168 Identities=15% Similarity=0.049 Sum_probs=126.5
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCccc-ccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccc---cccC
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDAL-TAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQT---LARQ 89 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~~-~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~---~~~~ 89 (227)
++.||||.|++.|+.++++.|++.+.... ....+..|.||||+|+..|+. +++++|++.+ ++ .+..
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~--------eiv~~Ll~~g--ad~~~~~i~ 160 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHL--------HVLNRLCELA--PTEIMAMIQ 160 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCH--------HHHHHHHHSC--TTTHHHHHS
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCH--------HHHHHHHhCC--CCccccccC
Confidence 35699999999999999999988865211 011245678899999999999 9999999998 43 2222
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCcccc--CCCCCChHHHHHH-HcCChHHHHHHHhhcCCCccccCCCCccHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNI--RGGLDTLPIHEAA-YKGHKNTFQYLLEVTHGVDIYSGNDGARVLL 166 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 166 (227)
+.. .||||+|+..|+.+++++|++++++ ++. .+..|.||||+|+ ..|+.+++++|++.|+. |.||||
T Consensus 161 ~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--------~~taL~ 230 (376)
T 2aja_A 161 AEN-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM--------LAYAEI 230 (376)
T ss_dssp HHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------HHHHHH
T ss_pred CCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------cchHHH
Confidence 223 8999999999999999999999887 455 7778899999999 99999999999986632 789999
Q ss_pred HHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 167 LLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 167 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
.|+..|+.+++++|++.+ ...... .++++.|+..+
T Consensus 231 ~Aa~~g~~evv~lL~~~g-a~~~~~----~~~l~~A~~~g 265 (376)
T 2aja_A 231 HEFEYGEKYVNPFIARHV-NRLKEM----HDAFKLSNPDG 265 (376)
T ss_dssp CTTTTTTTTHHHHHHHHH-HHHHHH----HTTTTTTSSSS
T ss_pred HHHHCCCHHHHHHHHhcC-cccccc----cHHHHHHHHCC
Confidence 999999999999998773 322222 23566665544
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=8.7e-24 Score=143.75 Aligned_cols=112 Identities=14% Similarity=0.063 Sum_probs=103.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLI 169 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~ 169 (227)
+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++.|++++ .++..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHH
Confidence 34678999999999999999999999998 79999999999999999999999999999999999 99999999999999
Q ss_pred HhCcHHHHHHHHHhCCCCccccccccccHHHHHhh
Q 027136 170 AANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQ 204 (227)
Q Consensus 170 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 204 (227)
..++.+++++|++. +.+.+.+|..|.||+|+|..
T Consensus 82 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 82 YEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCC
T ss_pred HcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhCC
Confidence 99999999999987 66678999999999999843
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=4.5e-24 Score=162.07 Aligned_cols=128 Identities=18% Similarity=0.170 Sum_probs=116.6
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC-C
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG-G 125 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~ 125 (227)
+..|.||||+|+..|+. +++++|++ + .+++.+|..|.||||+|+..|+.+++++|++++++ ++.++ .
T Consensus 42 ~~~g~t~L~~A~~~g~~--------~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~ 109 (244)
T 3ui2_A 42 VSEYETPWWTAARKADE--------QALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMR 109 (244)
T ss_dssp HHHHHHHHHHHHTTTCH--------HHHHHTTT-T--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSS
T ss_pred ccCCCCHHHHHHHcCCH--------HHHHHHHc-C--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCC
Confidence 45689999999999999 99999999 7 88999999999999999999999999999999999 67777 8
Q ss_pred CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 126 LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 126 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
.|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..+ ....+.||+++|+..
T Consensus 110 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 110 GGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREIL------------------KTTPKGNPMQFGRRI 170 (244)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHc
Confidence 89999999999999999999999999999 99999999999998622 125689999999873
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=2.1e-24 Score=161.51 Aligned_cols=135 Identities=16% Similarity=0.131 Sum_probs=112.7
Q ss_pred hhhcccHHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhc-CCccccccC
Q 027136 11 EYYVRYWPLYRMIEKNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASK-VDPQTLARQ 89 (227)
Q Consensus 11 ~~~~~~~~L~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~-~~~~~~~~~ 89 (227)
.+..|.||||.|+..|+.++++.|++.+. .++.+ +..|.||||+|+..|+. +++++|++. + ++++.+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~--------~~v~~Ll~~~g--~~~~~~ 136 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRV-GVNGL-DKAGSTALYWACHGGHK--------DIVEMLFTQPN--IELNQQ 136 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCH--------HHHHHHTTSTT--CCCCCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCC-Ccccc-CCCCCCHHHHHHHcCCH--------HHHHHHHcCCC--CCcccc
Confidence 34567899999999999999999999876 45556 88999999999999999 999999999 7 889999
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCC
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGN 159 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 159 (227)
|..|.||||+|+..|+.+++++|++++++ ++.+|..|.|||++|+..+..++++.|+..++... ..+.
T Consensus 137 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~-~~~~ 204 (222)
T 3ehr_A 137 NKLGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT-LSNA 204 (222)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhh-ccch
Confidence 99999999999999999999999999999 79999999999999999999999999999988765 4443
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=4.7e-23 Score=159.30 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=114.0
Q ss_pred ccHHHHHHHhcCccccchhHHHHHHHHHhcCCccc------cccCCCCCCcHHHHHHhc---CCHHHHHHHHHcCCCccc
Q 027136 51 SSTIFHAIVELLVDVESDEATCLLDKLASKVDPQT------LARQDEHGYTALFLCAGK---GNLRALKVLVKCNPNLTN 121 (227)
Q Consensus 51 ~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~------~~~~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~ 121 (227)
.++|+.|+..|+. +.+..+++.+ .+ ++..+..|.||||+|+.. ++.+++++|++++++ ++
T Consensus 131 l~~l~~a~~~~d~--------~~~~~ll~~g--~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in 199 (278)
T 1dcq_A 131 LHSLCEAVKTRDI--------FGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LD 199 (278)
T ss_dssp HHHHHHHHHTTCH--------HHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TT
T ss_pred hhhhhhHhhhccc--------HHHHHHHHhh--cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-cc
Confidence 3589999999999 9999999998 55 444578899999999999 899999999999999 79
Q ss_pred cCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCC
Q 027136 122 IRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHP 185 (227)
Q Consensus 122 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 185 (227)
.+|..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.+.
T Consensus 200 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 200 KQTGKGSTALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999999999999999999 999999999999999999999999998744
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=3.2e-23 Score=165.71 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=118.5
Q ss_pred CCCccHHHHHHHh-cCccccchhHHHHHHHHHhcCCccccccCC--CCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCC
Q 027136 48 APGSSTIFHAIVE-LLVDVESDEATCLLDKLASKVDPQTLARQD--EHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRG 124 (227)
Q Consensus 48 ~~g~t~L~~a~~~-~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~--~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 124 (227)
..+.|+||.|+.. ++. +++++|++.+ ++++..+ ..|.||||+|+..|+.+++++|++++++ ++..|
T Consensus 197 ~~~~t~L~~Aa~~~g~~--------~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d 265 (368)
T 3jue_A 197 LHPGALLFRASGHPPSL--------PTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQAD 265 (368)
T ss_dssp CCHHHHHHHHTSSSCCH--------HHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred CCCCcHHHHHHHccCCH--------HHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCC
Confidence 3456899999999 999 9999999999 8888887 8899999999999999999999999999 79999
Q ss_pred CCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCC--CccccccccccHHHHH
Q 027136 125 GLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPT--IGRDSIDSRRIVLNKL 202 (227)
Q Consensus 125 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~--~~~~~~~~g~t~l~~a 202 (227)
..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|+..... .....+..+.|+++++
T Consensus 266 ~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 266 SAGRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999976332 3334556788998887
Q ss_pred hhC
Q 027136 203 AQK 205 (227)
Q Consensus 203 ~~~ 205 (227)
...
T Consensus 345 ~~~ 347 (368)
T 3jue_A 345 RDF 347 (368)
T ss_dssp ---
T ss_pred HHH
Confidence 653
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=1e-24 Score=174.98 Aligned_cols=166 Identities=17% Similarity=0.087 Sum_probs=132.5
Q ss_pred cccHHHHHHHH-hCCHHHHHHHHHcCCcccccccCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCcc-ccccCCC
Q 027136 14 VRYWPLYRMIE-KNDWRGVEDFVTNHPDALTAKTVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQ-TLARQDE 91 (227)
Q Consensus 14 ~~~~~L~~a~~-~g~~~~v~~ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~-~~~~~~~ 91 (227)
.+.++++.|.. .++.+.++.+++.+. ++.||||+|+..|+. +++++|++.+.+. .....+.
T Consensus 64 ~~ll~~~~a~~~~~~~~~~~~l~~~g~---------~~~T~Lh~Aa~~G~~--------e~v~~Ll~~ga~~~~~~~~~~ 126 (376)
T 2aja_A 64 RQLLCLYYAHYNRNAKQLWSDAHKKGI---------KSEVICFVAAITGCS--------SALDTLCLLLTSDEIVKVIQA 126 (376)
T ss_dssp HHHHHHHHHHTTTTCTTHHHHHHHHTC---------CHHHHHHHHHHHCCH--------HHHHHHTTC--CCSSCC--CH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHcCC---------CcCCHHHHHHHcCCH--------HHHHHHHHcCCcHHHHHHhcc
Confidence 34567777765 577888888776653 236999999999999 9999999998321 1123445
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCc--cccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccc--cCCCCccHHHH
Q 027136 92 HGYTALFLCAGKGNLRALKVLVKCNPNL--TNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIY--SGNDGARVLLL 167 (227)
Q Consensus 92 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t~L~~ 167 (227)
.+.||||+|+..|+.+++++|++++++. .+..+.. .||||+|+..|+.+++++|++.|++++ . .+..|.||||+
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEA-TAMIQAENYYAFRW 204 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH-HHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc-hhccCCCCCCHHHH
Confidence 6789999999999999999999999641 1223333 999999999999999999999999987 6 78889999999
Q ss_pred HH-HhCcHHHHHHHHHhCCCCccccccccccHHHHHhhCC
Q 027136 168 LI-AANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQKP 206 (227)
Q Consensus 168 a~-~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 206 (227)
|+ ..|+.+++++|++. +. .|.||++.|+.++
T Consensus 205 Aa~~~G~~eiv~~Ll~~-ga-------~~~taL~~Aa~~g 236 (376)
T 2aja_A 205 AAVGRGHHNVINFLLDC-PV-------MLAYAEIHEFEYG 236 (376)
T ss_dssp HHSTTCCHHHHHHHTTS-HH-------HHHHHHHCTTTTT
T ss_pred HHHHCCCHHHHHHHHhC-CC-------ccchHHHHHHHCC
Confidence 99 99999999999974 32 3899999999865
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=1.8e-22 Score=168.03 Aligned_cols=128 Identities=12% Similarity=0.076 Sum_probs=116.4
Q ss_pred CccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC------CCCCCcHHHHHHh---cCCHHHHHHHHHcCCCcc
Q 027136 50 GSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ------DEHGYTALFLCAG---KGNLRALKVLVKCNPNLT 120 (227)
Q Consensus 50 g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~------~~~~~t~L~~a~~---~~~~~~~~~Ll~~~~~~~ 120 (227)
..+.||.|+..|+. ++++.|++.+ ++++.. +..|.||||+|+. .|+.+++++|++++++ +
T Consensus 132 ~~~~L~~A~~~g~~--------~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-v 200 (497)
T 3lvq_E 132 EPQRLWTAICNRDL--------LSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-L 200 (497)
T ss_dssp CHHHHHHHHHHTCH--------HHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-T
T ss_pred cHHHHHHHHhccCH--------HHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-C
Confidence 44679999999999 9999999999 888766 8889999999965 8999999999999999 7
Q ss_pred ccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccc
Q 027136 121 NIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRD 190 (227)
Q Consensus 121 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~ 190 (227)
+.+|..|+||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|++. +++...
T Consensus 201 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~ 268 (497)
T 3lvq_E 201 DAKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQA-QAGTFA 268 (497)
T ss_dssp TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC----
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCCCC
Confidence 9999999999999999999999999999999999 9999999999999999999999999977 444444
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=5.5e-22 Score=153.33 Aligned_cols=128 Identities=20% Similarity=0.283 Sum_probs=116.9
Q ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCcc-----cccccCCCCccHHHHHHHh---cCccccchhHHHHHHHHHhcCCccc
Q 027136 14 VRYWPLYRMIEKNDWRGVEDFVTNHPDA-----LTAKTVAPGSSTIFHAIVE---LLVDVESDEATCLLDKLASKVDPQT 85 (227)
Q Consensus 14 ~~~~~L~~a~~~g~~~~v~~ll~~~~~~-----~~~~~~~~g~t~L~~a~~~---~~~~~~~~~~~~~~~~Ll~~~~~~~ 85 (227)
...++|+.|+..|+.+.++.++..+.+. +... +..|.||||+|+.. |+. +++++|++.+ ++
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~-~~~g~t~Lh~A~~~~~~~~~--------~~v~~Ll~~g--a~ 197 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANG-HEPDETALHLAVRSVDRTSL--------HIVDFLVQNS--GN 197 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSC-SSTTCBHHHHHHHHCCTTTH--------HHHHHHHHHC--SC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhcccccc-ccCCCCcchHHHHhcccchH--------HHHHHHHHCC--CC
Confidence 3468999999999999999999988643 2222 67899999999999 888 9999999999 99
Q ss_pred cccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCC
Q 027136 86 LARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGV 153 (227)
Q Consensus 86 ~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 153 (227)
++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.|++.
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999 7999999999999999999999999999998864
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=3e-22 Score=129.38 Aligned_cols=89 Identities=29% Similarity=0.408 Sum_probs=46.7
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhC
Q 027136 93 GYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAAN 172 (227)
Q Consensus 93 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~ 172 (227)
|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|++.|++++ .++..|+||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcC
Confidence 44555555555555555555555554 35555555555555555555555555555555555 55555555555555555
Q ss_pred cHHHHHHHHHh
Q 027136 173 LYDVALDLLKL 183 (227)
Q Consensus 173 ~~~~~~~Ll~~ 183 (227)
+.+++++|++.
T Consensus 80 ~~~~~~~Ll~~ 90 (93)
T 1n0q_A 80 HLEVVKLLLEA 90 (93)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHc
Confidence 55555555544
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=4.9e-22 Score=128.41 Aligned_cols=80 Identities=24% Similarity=0.210 Sum_probs=67.3
Q ss_pred CCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHHHHhCCCCccccccccccHHHHHhhC
Q 027136 126 LDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDLLKLHPTIGRDSIDSRRIVLNKLAQK 205 (227)
Q Consensus 126 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 205 (227)
+|+||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..++.+++++|++. +.+.+.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHc
Confidence 47889999999999999999999998888 8888899999999999999999988876 555678888899999998876
Q ss_pred CC
Q 027136 206 PY 207 (227)
Q Consensus 206 ~~ 207 (227)
+.
T Consensus 79 ~~ 80 (93)
T 1n0q_A 79 GH 80 (93)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=3.9e-22 Score=159.50 Aligned_cols=146 Identities=10% Similarity=0.028 Sum_probs=116.3
Q ss_pred hcccHHHHHHHHh-CCHHHHHHHHHcCCcccccccC--CCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccC
Q 027136 13 YVRYWPLYRMIEK-NDWRGVEDFVTNHPDALTAKTV--APGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQ 89 (227)
Q Consensus 13 ~~~~~~L~~a~~~-g~~~~v~~ll~~~~~~~~~~~~--~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 89 (227)
..+.++||.|+.. |+.++++.|++.+. .++.. + ..|.||||+|+..|+. +++++|++.+ ++++..
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Ga-dvn~~-~~~~~g~TpLh~Aa~~g~~--------~iv~~LL~~G--advn~~ 264 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGA-DVNWV-NGGQDNATPLIQATAANSL--------LACEFLLQNG--ANVNQA 264 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTC-CTTCC-CTTTTCCCHHHHHHHTTCH--------HHHHHHHHTT--CCTTCC
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCC-CCCcc-ccccCCCCHHHHHHHCCCH--------HHHHHHHHcC--CCCCCC
Confidence 4456899999999 99999999999886 44444 5 7899999999999999 9999999999 999999
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCc--cccCCCCccHHHH
Q 027136 90 DEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVD--IYSGNDGARVLLL 167 (227)
Q Consensus 90 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~--~~~~~~g~t~L~~ 167 (227)
|..|.||||+|+..++.+++++|++++++ ++.+|..|.||||+|+..++.+++++|+..+.... ...+..+.|++++
T Consensus 265 d~~G~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i 343 (368)
T 3jue_A 265 DSAGRGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDI 343 (368)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHH
Confidence 99999999999999999999999999999 79999999999999999999999999998764421 1455667888776
Q ss_pred HHHh
Q 027136 168 LIAA 171 (227)
Q Consensus 168 a~~~ 171 (227)
+...
T Consensus 344 ~~~~ 347 (368)
T 3jue_A 344 FRDF 347 (368)
T ss_dssp ----
T ss_pred HHHH
Confidence 6553
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=7e-22 Score=164.50 Aligned_cols=134 Identities=21% Similarity=0.149 Sum_probs=114.0
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCcccccc-----cCCCCccHHHHHHH---hcCccccchhHHHHHHHHHhcCCcccccc
Q 027136 17 WPLYRMIEKNDWRGVEDFVTNHPDALTAK-----TVAPGSSTIFHAIV---ELLVDVESDEATCLLDKLASKVDPQTLAR 88 (227)
Q Consensus 17 ~~L~~a~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~L~~a~~---~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 88 (227)
+.||.|+..|+.+.++.|+..+.+ ++.. .+..|.||||+||. .|+. +++++|++.+ ++++.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~--------~~v~~Ll~~g--a~vn~ 202 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASL--------PLVDFIIQNG--GHLDA 202 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTH--------HHHHHHHHHS--CCTTC
T ss_pred HHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccH--------HHHHHHHHcC--CCCCc
Confidence 679999999999999999999864 2222 26689999999977 8889 9999999999 99999
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHH
Q 027136 89 QDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLL 168 (227)
Q Consensus 89 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a 168 (227)
+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|++++ . +|+|.+
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-~------~~~h~~ 274 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGTF-A------FPLHVD 274 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC-C------Ccceee
Confidence 999999999999999999999999999999 79999999999999999999999999999999987 3 566655
Q ss_pred H
Q 027136 169 I 169 (227)
Q Consensus 169 ~ 169 (227)
.
T Consensus 275 ~ 275 (497)
T 3lvq_E 275 Y 275 (497)
T ss_dssp -
T ss_pred c
Confidence 4
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=4.2e-22 Score=133.76 Aligned_cols=106 Identities=22% Similarity=0.235 Sum_probs=68.1
Q ss_pred CCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCC
Q 027136 47 VAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGL 126 (227)
Q Consensus 47 ~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (227)
+..|.||||+|+..|+. +++++|++.+ .+++..+..|.||||+|+..++.+++++|++++++ ++.+|..
T Consensus 6 d~~g~t~L~~A~~~~~~--------~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~ 74 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHA--------EEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKD 74 (115)
T ss_dssp SCSSCCHHHHHHHHTCH--------HHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTT
T ss_pred CCCCCCHHHHHHHcCCH--------HHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCC
Confidence 55666666666666666 6666666666 55666666666666666666666666666666666 4666666
Q ss_pred CChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccH
Q 027136 127 DTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARV 164 (227)
Q Consensus 127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 164 (227)
|.||||+|+..++.+++++|++.|++++ .++..|.||
T Consensus 75 g~tpl~~A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~ 111 (115)
T 2l6b_A 75 GNTPEHLAKKNGHHEIVKLLDAKGADVN-ARSWGSSHH 111 (115)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTSSSHH-HHSCCCC--
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCcccccc
Confidence 6666666666666666666666666666 566666555
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=7.7e-22 Score=132.43 Aligned_cols=109 Identities=20% Similarity=0.143 Sum_probs=100.1
Q ss_pred cCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHH
Q 027136 88 RQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLL 167 (227)
Q Consensus 88 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 167 (227)
.+|..|.||||+|+..++.+++++|++++++ ++.+|..|.||||+|+..++.+++++|++.|++++ .++..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHH
Confidence 5678899999999999999999999999998 79999999999999999999999999999999999 999999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCccccccccccHH
Q 027136 168 LIAANLYDVALDLLKLHPTIGRDSIDSRRIVL 199 (227)
Q Consensus 168 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 199 (227)
|+..++.+++++|++. +++.+.++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence 9999999999999976 667788899998875
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.4e-19 Score=119.29 Aligned_cols=94 Identities=20% Similarity=0.198 Sum_probs=84.6
Q ss_pred ccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccH
Q 027136 85 TLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARV 164 (227)
Q Consensus 85 ~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 164 (227)
.....+..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.|++++ .++..|+||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tp 93 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-AQDKFGKTA 93 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccccCCCcH
Confidence 3445677889999999999999999999999998 78999999999999999999999999999999999 999999999
Q ss_pred HHHHHHhCcHHHHHHH
Q 027136 165 LLLLIAANLYDVALDL 180 (227)
Q Consensus 165 L~~a~~~~~~~~~~~L 180 (227)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=9.6e-19 Score=116.38 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=84.9
Q ss_pred cCCCCccHHHHHHHhcCccccchhHHHHHHHHHhcCCccccccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCccccCCC
Q 027136 46 TVAPGSSTIFHAIVELLVDVESDEATCLLDKLASKVDPQTLARQDEHGYTALFLCAGKGNLRALKVLVKCNPNLTNIRGG 125 (227)
Q Consensus 46 ~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 125 (227)
.+.+|.||||+|+..|+. +++++|++.+ ++++.+|..|.||||+|+..++.+++++|++++++ ++.+|.
T Consensus 20 ~~~~g~t~L~~A~~~g~~--------~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~ 88 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQD--------DEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDK 88 (110)
T ss_dssp --CCHHHHHHHHHHHTCH--------HHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred cCCccchHHHHHHHcCCH--------HHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccc
Confidence 378899999999999999 9999999999 88999999999999999999999999999999999 799999
Q ss_pred CCChHHHHHHHcCChHHHHHH
Q 027136 126 LDTLPIHEAAYKGHKNTFQYL 146 (227)
Q Consensus 126 ~g~t~l~~a~~~~~~~~~~~L 146 (227)
.|.||||+|+..|+.+++++|
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999876
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=43.02 E-value=67 Score=25.76 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=39.2
Q ss_pred HHHHHhCCHHHHHHHHHcCCcccccc------------cCCCCccHHHHHHHhcCccccchhHHHHHHHHHhc
Q 027136 20 YRMIEKNDWRGVEDFVTNHPDALTAK------------TVAPGSSTIFHAIVELLVDVESDEATCLLDKLASK 80 (227)
Q Consensus 20 ~~a~~~g~~~~v~~ll~~~~~~~~~~------------~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~Ll~~ 80 (227)
+..+..|+...|+..+..+++..... .-..|.|.+|+|+++.+. +++..|+..
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~--------~~l~~ll~~ 91 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQ--------DMLAILLTE 91 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCH--------HHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhh--------hHHHHhhhc
Confidence 45567899999999998876422111 124589999999999999 888877763
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=39.88 E-value=24 Score=17.57 Aligned_cols=19 Identities=5% Similarity=-0.176 Sum_probs=14.2
Q ss_pred HHHHHHhCcHHHHHHHHHh
Q 027136 165 LLLLIAANLYDVALDLLKL 183 (227)
Q Consensus 165 L~~a~~~~~~~~~~~Ll~~ 183 (227)
..+|++.|+++.++.|-.+
T Consensus 17 iyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHH
Confidence 4578888888888877543
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=34.27 E-value=1.1e+02 Score=24.52 Aligned_cols=61 Identities=16% Similarity=0.093 Sum_probs=34.3
Q ss_pred HhcCCHHHHHHHHHcCCCccccCCCCCChHHHHHHHcCChHHHHHHHhhcCCCccccCCCCccHHHHHHHhCcHHHHHHH
Q 027136 101 AGKGNLRALKVLVKCNPNLTNIRGGLDTLPIHEAAYKGHKNTFQYLLEVTHGVDIYSGNDGARVLLLLIAANLYDVALDL 180 (227)
Q Consensus 101 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L 180 (227)
+.-|+...|+..+..+.+ ++. ..|+...+. +.. .+ .-.-|.|..|+|++..+.++...|
T Consensus 30 v~e~~~~~ve~y~~~gg~-~~r----~lt~~e~~l-----------ln~-~~----af~~g~tlvhlair~~r~~~l~~l 88 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGD-IAR----QLTADEVRL-----------LNR-PS----AFDVGYTLVHLAIRFQRQDMLAIL 88 (454)
T ss_dssp HHHTCHHHHHHHHTTTCC-TTC----CCCHHHHHH-----------HCC-TT----TCCTTCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCc-hhc----ccCHHHHHH-----------hCC-Cc----ccccCchhhhhhhhhhhhhHHHHh
Confidence 356778888888887776 222 123322221 111 11 133467777777777777777766
Q ss_pred HH
Q 027136 181 LK 182 (227)
Q Consensus 181 l~ 182 (227)
+.
T Consensus 89 l~ 90 (454)
T 3zrh_A 89 LT 90 (454)
T ss_dssp HH
T ss_pred hh
Confidence 64
Done!