Query 027137
Match_columns 227
No_of_seqs 168 out of 1158
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 08:38:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027137.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027137hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 1.4E-79 4.8E-84 553.9 23.2 222 4-227 2-247 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 1.9E-79 6.4E-84 554.1 20.8 226 1-227 1-251 (337)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 1.9E-78 6.5E-83 547.3 21.8 223 2-227 3-251 (338)
4 3doc_A Glyceraldehyde 3-phosph 100.0 1.9E-78 6.6E-83 547.1 20.5 222 3-227 2-249 (335)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 2E-78 7E-83 550.4 20.1 225 2-227 1-264 (359)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 9.8E-78 3.4E-82 544.5 22.4 222 3-227 7-253 (346)
7 4dib_A GAPDH, glyceraldehyde 3 100.0 4.3E-78 1.5E-82 545.9 18.8 222 3-227 4-250 (345)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 1.2E-75 3.9E-80 531.9 16.4 222 2-227 20-270 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 3.5E-73 1.2E-77 515.4 19.8 225 1-227 9-260 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 1.4E-72 4.6E-77 510.3 21.2 221 4-227 2-250 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 4.5E-73 1.5E-77 514.4 18.0 222 3-227 2-248 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 1.8E-66 6.1E-71 470.4 20.5 220 4-227 1-245 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 2.5E-66 8.5E-71 476.4 20.6 222 3-227 2-251 (380)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 7.2E-65 2.5E-69 461.3 22.1 222 3-227 2-251 (339)
15 1rm4_O Glyceraldehyde 3-phosph 100.0 5.3E-65 1.8E-69 461.7 20.6 222 4-227 2-249 (337)
16 3cps_A Glyceraldehyde 3-phosph 100.0 2.9E-64 9.8E-69 459.4 19.8 224 2-227 16-267 (354)
17 3e5r_O PP38, glyceraldehyde-3- 100.0 2.7E-63 9.4E-68 450.6 21.4 227 1-227 1-251 (337)
18 3cmc_O GAPDH, glyceraldehyde-3 100.0 1.7E-63 5.9E-68 451.5 19.6 221 4-227 2-247 (334)
19 1u8f_O GAPDH, glyceraldehyde-3 100.0 1.3E-62 4.3E-67 445.9 20.5 225 1-227 1-249 (335)
20 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.3E-62 4.4E-67 445.4 19.7 221 4-227 1-247 (332)
21 2x5j_O E4PDH, D-erythrose-4-ph 100.0 2.5E-62 8.7E-67 444.6 18.6 222 3-227 2-251 (339)
22 1gad_O D-glyceraldehyde-3-phos 100.0 1.3E-61 4.3E-66 438.7 19.6 220 4-227 2-246 (330)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 6.1E-49 2.1E-53 357.2 8.3 203 1-227 1-234 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 6.7E-36 2.3E-40 270.1 14.8 192 4-227 1-246 (331)
25 2r00_A Aspartate-semialdehyde 100.0 1.6E-35 5.6E-40 267.9 16.7 194 1-227 1-252 (336)
26 1cf2_P Protein (glyceraldehyde 100.0 3.8E-37 1.3E-41 278.8 5.3 203 4-227 2-227 (337)
27 2hjs_A USG-1 protein homolog; 100.0 1.5E-35 5.1E-40 268.6 11.2 195 2-227 5-254 (340)
28 1b7g_O Protein (glyceraldehyde 100.0 9.4E-36 3.2E-40 270.0 9.2 192 4-227 2-227 (340)
29 2czc_A Glyceraldehyde-3-phosph 100.0 4.4E-36 1.5E-40 271.0 6.4 201 2-227 1-225 (334)
30 2ep5_A 350AA long hypothetical 100.0 5.4E-33 1.8E-37 252.5 7.1 206 2-227 3-252 (350)
31 1t4b_A Aspartate-semialdehyde 100.0 6.5E-34 2.2E-38 260.5 0.7 157 4-187 2-168 (367)
32 1xyg_A Putative N-acetyl-gamma 100.0 7.7E-32 2.6E-36 245.9 8.5 198 1-227 14-263 (359)
33 1ys4_A Aspartate-semialdehyde 100.0 1.6E-31 5.4E-36 243.0 9.1 207 2-227 7-258 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 7.9E-31 2.7E-35 238.0 11.3 197 1-227 1-245 (345)
35 3pwk_A Aspartate-semialdehyde 99.9 9.5E-27 3.2E-31 213.0 16.2 152 3-187 2-161 (366)
36 3tz6_A Aspartate-semialdehyde 99.9 2.2E-26 7.6E-31 209.0 15.9 151 4-187 2-162 (344)
37 3pzr_A Aspartate-semialdehyde 99.9 2.6E-27 9.1E-32 216.9 6.2 154 4-187 1-167 (370)
38 4dpk_A Malonyl-COA/succinyl-CO 99.9 3.5E-27 1.2E-31 215.4 4.0 166 3-187 7-186 (359)
39 4dpl_A Malonyl-COA/succinyl-CO 99.9 3.5E-27 1.2E-31 215.4 3.8 166 3-187 7-186 (359)
40 3uw3_A Aspartate-semialdehyde 99.9 5.6E-27 1.9E-31 215.2 5.2 155 3-187 4-171 (377)
41 2nqt_A N-acetyl-gamma-glutamyl 99.9 7.8E-26 2.7E-30 205.9 8.0 199 1-226 7-257 (352)
42 3hsk_A Aspartate-semialdehyde 99.9 5.3E-25 1.8E-29 202.3 8.6 166 1-187 17-206 (381)
43 3dr3_A N-acetyl-gamma-glutamyl 99.9 4.2E-24 1.4E-28 193.5 5.5 198 4-225 5-248 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.8 2E-20 6.7E-25 170.3 4.7 154 3-187 13-192 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.7 6.9E-08 2.4E-12 86.1 9.5 154 1-184 2-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.4 4.8E-07 1.6E-11 80.4 7.0 90 1-126 1-90 (320)
47 3bio_A Oxidoreductase, GFO/IDH 98.3 9.8E-07 3.3E-11 77.9 6.6 91 1-126 7-97 (304)
48 3e18_A Oxidoreductase; dehydro 98.2 4.2E-06 1.4E-10 75.1 7.8 95 1-126 3-97 (359)
49 4fb5_A Probable oxidoreductase 98.1 2.5E-06 8.5E-11 75.9 5.7 97 1-126 23-126 (393)
50 3gdo_A Uncharacterized oxidore 98.1 5.7E-06 1.9E-10 74.1 7.9 94 1-126 3-97 (358)
51 3ec7_A Putative dehydrogenase; 98.1 6.5E-06 2.2E-10 73.8 7.1 98 1-126 21-119 (357)
52 3evn_A Oxidoreductase, GFO/IDH 98.0 7.3E-06 2.5E-10 72.3 7.0 96 2-126 4-99 (329)
53 3qy9_A DHPR, dihydrodipicolina 98.0 7.7E-06 2.6E-10 70.5 6.8 36 1-37 1-36 (243)
54 3fhl_A Putative oxidoreductase 98.0 8.8E-06 3E-10 72.9 7.4 93 2-126 4-97 (362)
55 4h3v_A Oxidoreductase domain p 98.0 2.9E-06 1E-10 75.3 4.1 97 1-126 4-107 (390)
56 3db2_A Putative NADPH-dependen 98.0 1.1E-05 3.8E-10 71.8 7.6 95 2-126 4-98 (354)
57 3ing_A Homoserine dehydrogenas 98.0 1.3E-05 4.6E-10 71.7 8.0 36 1-36 2-43 (325)
58 3m2t_A Probable dehydrogenase; 98.0 1E-05 3.4E-10 72.6 7.2 97 1-126 3-100 (359)
59 3kux_A Putative oxidoreductase 98.0 1.1E-05 3.7E-10 71.9 7.3 94 1-126 4-99 (352)
60 3e9m_A Oxidoreductase, GFO/IDH 98.0 8.2E-06 2.8E-10 72.2 6.4 97 1-126 3-99 (330)
61 4hkt_A Inositol 2-dehydrogenas 98.0 1.1E-05 3.8E-10 71.1 7.0 94 2-126 2-95 (331)
62 2ejw_A HDH, homoserine dehydro 98.0 2.7E-05 9.1E-10 70.0 9.2 88 1-125 1-97 (332)
63 4f3y_A DHPR, dihydrodipicolina 97.9 2.7E-06 9.2E-11 74.5 2.3 97 1-123 5-102 (272)
64 3ezy_A Dehydrogenase; structur 97.9 1.1E-05 3.9E-10 71.5 6.2 95 3-126 2-96 (344)
65 3e82_A Putative oxidoreductase 97.9 2.1E-05 7.2E-10 70.6 7.6 92 3-126 7-99 (364)
66 3euw_A MYO-inositol dehydrogen 97.9 3.3E-05 1.1E-09 68.3 8.7 96 1-126 2-97 (344)
67 2ixa_A Alpha-N-acetylgalactosa 97.9 3.8E-05 1.3E-09 70.7 9.3 103 1-126 18-123 (444)
68 3rc1_A Sugar 3-ketoreductase; 97.9 1.7E-05 6E-10 70.7 6.6 96 1-126 25-121 (350)
69 3mz0_A Inositol 2-dehydrogenas 97.9 2.1E-05 7.1E-10 69.7 6.9 96 3-126 2-98 (344)
70 4ew6_A D-galactose-1-dehydroge 97.9 1.2E-05 4.1E-10 71.4 5.4 89 1-126 23-113 (330)
71 3mtj_A Homoserine dehydrogenas 97.9 2.3E-05 7.7E-10 73.2 7.4 93 2-126 9-111 (444)
72 4gqa_A NAD binding oxidoreduct 97.9 7.4E-06 2.5E-10 74.4 4.0 95 3-126 26-128 (412)
73 4had_A Probable oxidoreductase 97.8 1.4E-05 4.9E-10 70.7 5.4 95 3-126 23-118 (350)
74 3i23_A Oxidoreductase, GFO/IDH 97.8 2.6E-05 9E-10 69.4 7.0 95 3-126 2-97 (349)
75 1dih_A Dihydrodipicolinate red 97.8 2.1E-05 7.3E-10 68.6 5.9 101 1-126 3-104 (273)
76 3uuw_A Putative oxidoreductase 97.8 2.4E-05 8.2E-10 68.2 6.2 95 1-127 4-99 (308)
77 1tlt_A Putative oxidoreductase 97.8 2.5E-05 8.4E-10 68.5 6.3 93 2-126 4-97 (319)
78 3cea_A MYO-inositol 2-dehydrog 97.8 3.9E-05 1.3E-09 67.7 7.5 96 2-126 7-103 (346)
79 1ydw_A AX110P-like protein; st 97.8 4.1E-05 1.4E-09 68.3 7.5 99 2-126 5-103 (362)
80 2ho3_A Oxidoreductase, GFO/IDH 97.8 5.9E-05 2E-09 66.2 8.3 93 4-126 2-94 (325)
81 3f4l_A Putative oxidoreductase 97.8 4.5E-05 1.5E-09 67.7 7.3 94 3-126 2-97 (345)
82 3upl_A Oxidoreductase; rossman 97.8 6.9E-05 2.4E-09 69.9 8.6 111 2-123 22-137 (446)
83 3ohs_X Trans-1,2-dihydrobenzen 97.7 4.1E-05 1.4E-09 67.5 6.6 95 3-126 2-98 (334)
84 3q2i_A Dehydrogenase; rossmann 97.7 2.7E-05 9.4E-10 69.2 5.4 94 3-126 13-107 (354)
85 3c8m_A Homoserine dehydrogenas 97.7 1.2E-05 4E-10 72.0 2.7 34 3-36 6-46 (331)
86 3c1a_A Putative oxidoreductase 97.7 4.6E-05 1.6E-09 66.7 6.4 92 3-126 10-101 (315)
87 1h6d_A Precursor form of gluco 97.7 9.8E-05 3.3E-09 68.0 8.7 101 1-126 81-182 (433)
88 3ijp_A DHPR, dihydrodipicolina 97.6 1.5E-05 5.2E-10 70.4 2.2 97 2-123 20-117 (288)
89 2dc1_A L-aspartate dehydrogena 97.6 5.8E-05 2E-09 63.6 5.5 135 4-184 1-137 (236)
90 1lc0_A Biliverdin reductase A; 97.6 7.3E-05 2.5E-09 65.2 5.9 88 3-126 7-97 (294)
91 3do5_A HOM, homoserine dehydro 97.6 8.4E-05 2.9E-09 66.6 6.0 34 3-36 2-43 (327)
92 1zh8_A Oxidoreductase; TM0312, 97.6 0.00015 5E-09 64.4 7.5 95 3-126 18-114 (340)
93 1xea_A Oxidoreductase, GFO/IDH 97.5 0.00036 1.2E-08 61.2 9.5 93 3-126 2-95 (323)
94 3u3x_A Oxidoreductase; structu 97.5 6.5E-05 2.2E-09 67.4 4.6 95 2-126 25-120 (361)
95 3dty_A Oxidoreductase, GFO/IDH 97.5 0.00017 5.8E-09 65.3 7.0 104 1-126 10-117 (398)
96 3moi_A Probable dehydrogenase; 97.4 0.00015 5.3E-09 65.4 6.1 95 2-126 1-96 (387)
97 3v5n_A Oxidoreductase; structu 97.4 0.00023 7.9E-09 65.0 6.9 99 1-126 35-142 (417)
98 1p9l_A Dihydrodipicolinate red 97.4 0.00069 2.4E-08 58.3 9.3 38 4-41 1-39 (245)
99 2p2s_A Putative oxidoreductase 97.4 0.00034 1.2E-08 61.6 7.1 96 1-126 2-98 (336)
100 3btv_A Galactose/lactose metab 97.3 0.0001 3.5E-09 67.8 3.7 98 3-126 20-127 (438)
101 2nvw_A Galactose/lactose metab 97.3 0.00014 4.8E-09 68.0 4.7 99 2-126 38-146 (479)
102 3o9z_A Lipopolysaccaride biosy 97.3 0.00044 1.5E-08 60.8 7.4 94 3-126 3-104 (312)
103 2glx_A 1,5-anhydro-D-fructose 97.3 0.00056 1.9E-08 59.8 7.7 93 4-126 1-94 (332)
104 3ip3_A Oxidoreductase, putativ 97.3 8.9E-05 3E-09 65.5 2.4 96 3-126 2-99 (337)
105 3ic5_A Putative saccharopine d 97.2 0.0006 2.1E-08 49.8 6.2 96 3-124 5-100 (118)
106 3oa2_A WBPB; oxidoreductase, s 97.2 0.00067 2.3E-08 59.8 7.5 94 3-126 3-105 (318)
107 3oqb_A Oxidoreductase; structu 97.0 0.00046 1.6E-08 61.8 4.0 97 1-126 4-115 (383)
108 1j5p_A Aspartate dehydrogenase 97.0 0.0013 4.3E-08 57.1 6.4 134 3-184 12-147 (253)
109 4gmf_A Yersiniabactin biosynth 96.8 0.0027 9.1E-08 57.6 7.5 91 3-126 7-102 (372)
110 1r0k_A 1-deoxy-D-xylulose 5-ph 96.7 0.0011 3.6E-08 60.9 4.4 109 3-123 4-122 (388)
111 2dt5_A AT-rich DNA-binding pro 96.7 0.002 6.8E-08 54.2 5.2 94 3-127 80-174 (211)
112 2vt3_A REX, redox-sensing tran 96.6 0.0043 1.5E-07 52.3 7.2 94 3-127 85-179 (215)
113 1y81_A Conserved hypothetical 96.3 0.02 7E-07 44.5 8.9 85 3-126 14-102 (138)
114 3ggo_A Prephenate dehydrogenas 96.3 0.021 7.3E-07 50.2 10.0 92 2-127 32-129 (314)
115 3keo_A Redox-sensing transcrip 96.0 0.01 3.5E-07 50.0 6.0 96 3-126 84-181 (212)
116 2nu8_A Succinyl-COA ligase [AD 95.9 0.016 5.4E-07 50.6 6.9 87 3-123 7-94 (288)
117 3a06_A 1-deoxy-D-xylulose 5-ph 95.7 0.027 9.2E-07 51.3 7.9 112 1-125 1-116 (376)
118 1ebf_A Homoserine dehydrogenas 95.6 0.0095 3.3E-07 53.7 4.6 35 2-36 3-40 (358)
119 3abi_A Putative uncharacterize 95.5 0.0069 2.4E-07 54.0 2.9 93 3-126 16-108 (365)
120 2d59_A Hypothetical protein PH 95.4 0.077 2.6E-06 41.3 8.4 84 3-125 22-109 (144)
121 4huj_A Uncharacterized protein 95.2 0.016 5.3E-07 48.0 4.3 35 1-36 21-55 (220)
122 2duw_A Putative COA-binding pr 95.2 0.07 2.4E-06 41.7 7.7 86 3-125 13-102 (145)
123 1iuk_A Hypothetical protein TT 95.1 0.064 2.2E-06 41.7 7.1 87 3-126 13-103 (140)
124 1qyd_A Pinoresinol-lariciresin 95.1 0.029 1E-06 47.6 5.6 32 3-35 4-36 (313)
125 3gpi_A NAD-dependent epimerase 95.0 0.027 9.3E-07 47.4 5.1 34 1-35 1-34 (286)
126 3dhn_A NAD-dependent epimerase 94.9 0.064 2.2E-06 43.4 7.1 32 3-35 4-36 (227)
127 3i6i_A Putative leucoanthocyan 94.9 0.02 7E-07 49.8 4.1 35 1-36 8-43 (346)
128 3ius_A Uncharacterized conserv 94.9 0.23 8E-06 41.4 10.6 34 2-36 4-37 (286)
129 2bma_A Glutamate dehydrogenase 94.7 0.12 4.3E-06 48.3 9.1 103 4-123 253-365 (470)
130 1oi7_A Succinyl-COA synthetase 94.2 0.074 2.5E-06 46.3 6.1 87 3-123 7-94 (288)
131 3qvo_A NMRA family protein; st 94.1 0.09 3.1E-06 43.2 6.1 35 1-35 21-56 (236)
132 3ff4_A Uncharacterized protein 94.0 0.2 6.9E-06 38.2 7.6 83 4-126 5-91 (122)
133 1qyc_A Phenylcoumaran benzylic 94.0 0.061 2.1E-06 45.5 5.1 32 3-35 4-36 (308)
134 3e48_A Putative nucleoside-dip 93.7 0.055 1.9E-06 45.5 4.2 31 5-35 2-33 (289)
135 1ur5_A Malate dehydrogenase; o 93.6 0.052 1.8E-06 47.5 4.1 33 3-36 2-34 (309)
136 3dqp_A Oxidoreductase YLBE; al 93.5 0.29 1E-05 39.3 8.2 30 5-35 2-32 (219)
137 3b1f_A Putative prephenate deh 93.0 0.078 2.7E-06 45.1 4.1 35 1-36 4-39 (290)
138 3e8x_A Putative NAD-dependent 93.0 0.57 1.9E-05 38.0 9.3 33 2-35 20-53 (236)
139 1t2d_A LDH-P, L-lactate dehydr 92.9 0.076 2.6E-06 46.9 4.0 35 1-36 1-36 (322)
140 1id1_A Putative potassium chan 92.8 0.13 4.4E-06 39.6 4.8 34 1-35 1-34 (153)
141 1bgv_A Glutamate dehydrogenase 92.6 0.29 9.9E-06 45.5 7.6 104 3-124 230-344 (449)
142 4ina_A Saccharopine dehydrogen 92.5 0.095 3.2E-06 47.5 4.1 97 4-119 2-102 (405)
143 2ew2_A 2-dehydropantoate 2-red 92.3 0.13 4.5E-06 43.6 4.7 33 1-34 1-33 (316)
144 2yfq_A Padgh, NAD-GDH, NAD-spe 92.3 0.19 6.3E-06 46.4 5.9 96 3-125 212-321 (421)
145 3llv_A Exopolyphosphatase-rela 92.1 0.16 5.6E-06 38.2 4.4 31 4-35 7-37 (141)
146 3r3j_A Glutamate dehydrogenase 92.0 0.53 1.8E-05 43.9 8.5 103 4-123 240-352 (456)
147 3d0o_A L-LDH 1, L-lactate dehy 91.9 0.16 5.4E-06 44.6 4.8 35 2-36 5-39 (317)
148 3evt_A Phosphoglycerate dehydr 91.9 0.18 6.2E-06 44.7 5.1 31 4-35 138-168 (324)
149 2yv1_A Succinyl-COA ligase [AD 91.9 0.27 9.4E-06 42.8 6.2 87 3-123 13-100 (294)
150 2r6j_A Eugenol synthase 1; phe 91.9 0.14 4.7E-06 43.7 4.2 31 4-35 12-43 (318)
151 3c1o_A Eugenol synthase; pheny 91.9 0.17 5.8E-06 43.1 4.8 31 4-35 5-36 (321)
152 3fwz_A Inner membrane protein 91.8 0.19 6.4E-06 38.2 4.5 37 3-43 7-43 (140)
153 2rcy_A Pyrroline carboxylate r 91.8 0.12 4.2E-06 43.0 3.7 26 1-26 2-27 (262)
154 1bg6_A N-(1-D-carboxylethyl)-L 91.7 0.17 5.8E-06 44.0 4.7 31 2-33 3-33 (359)
155 1vm6_A DHPR, dihydrodipicolina 91.7 0.33 1.1E-05 41.2 6.3 32 4-36 13-45 (228)
156 2yv2_A Succinyl-COA synthetase 91.6 0.38 1.3E-05 42.0 6.8 89 3-125 13-104 (297)
157 3hg7_A D-isomer specific 2-hyd 91.4 0.21 7.1E-06 44.4 5.0 31 4-35 141-171 (324)
158 3aog_A Glutamate dehydrogenase 91.4 0.74 2.5E-05 42.7 8.8 96 3-125 235-339 (440)
159 1lld_A L-lactate dehydrogenase 91.3 0.49 1.7E-05 40.7 7.2 31 3-33 7-38 (319)
160 4g2n_A D-isomer specific 2-hyd 91.1 0.21 7.2E-06 44.7 4.8 30 4-34 174-203 (345)
161 3d1l_A Putative NADP oxidoredu 91.1 0.2 6.7E-06 42.0 4.3 38 3-43 10-47 (266)
162 4e21_A 6-phosphogluconate dehy 91.0 0.21 7.4E-06 44.7 4.7 40 3-46 22-61 (358)
163 3tri_A Pyrroline-5-carboxylate 91.0 0.19 6.5E-06 43.1 4.2 34 1-36 1-37 (280)
164 3pp8_A Glyoxylate/hydroxypyruv 91.0 0.2 6.9E-06 44.2 4.4 31 4-35 140-170 (315)
165 2i76_A Hypothetical protein; N 91.0 0.056 1.9E-06 46.1 0.8 33 1-36 1-33 (276)
166 2pi1_A D-lactate dehydrogenase 91.0 0.22 7.4E-06 44.3 4.7 30 4-34 142-171 (334)
167 2ahr_A Putative pyrroline carb 91.0 0.29 9.9E-06 40.8 5.2 36 4-43 4-39 (259)
168 3ego_A Probable 2-dehydropanto 90.9 1.7 6E-05 37.4 10.4 31 3-35 2-32 (307)
169 1lss_A TRK system potassium up 90.9 0.31 1.1E-05 35.9 4.8 30 4-34 5-34 (140)
170 1ldn_A L-lactate dehydrogenase 90.9 0.39 1.3E-05 42.0 6.2 34 3-36 6-39 (316)
171 1vpd_A Tartronate semialdehyde 90.8 0.21 7.3E-06 42.4 4.3 32 3-36 5-36 (299)
172 3gt0_A Pyrroline-5-carboxylate 90.7 0.22 7.7E-06 41.4 4.3 41 1-45 1-44 (247)
173 1qp8_A Formate dehydrogenase; 90.6 0.24 8.3E-06 43.3 4.5 30 4-34 125-154 (303)
174 1xdw_A NAD+-dependent (R)-2-hy 90.5 0.25 8.6E-06 43.7 4.7 30 4-34 147-176 (331)
175 3cky_A 2-hydroxymethyl glutara 90.4 0.26 8.8E-06 41.9 4.5 32 3-36 4-35 (301)
176 3gg9_A D-3-phosphoglycerate de 90.4 0.26 8.9E-06 44.2 4.7 30 4-34 161-190 (352)
177 1dxy_A D-2-hydroxyisocaproate 90.4 0.26 9E-06 43.6 4.7 30 4-34 146-175 (333)
178 1gtm_A Glutamate dehydrogenase 90.3 0.3 1E-05 44.9 5.1 33 4-37 213-246 (419)
179 2yq5_A D-isomer specific 2-hyd 90.3 0.27 9.2E-06 44.0 4.7 30 4-34 149-178 (343)
180 2g76_A 3-PGDH, D-3-phosphoglyc 90.2 0.29 9.9E-06 43.5 4.8 30 4-34 166-195 (335)
181 3p7m_A Malate dehydrogenase; p 90.2 0.21 7.3E-06 44.1 3.8 35 1-36 3-37 (321)
182 1gdh_A D-glycerate dehydrogena 90.2 0.3 1E-05 43.0 4.8 31 4-35 147-177 (320)
183 1mx3_A CTBP1, C-terminal bindi 90.1 0.3 1E-05 43.7 4.8 30 4-34 169-198 (347)
184 4dgs_A Dehydrogenase; structur 90.1 0.3 1E-05 43.6 4.8 30 4-34 172-201 (340)
185 3jtm_A Formate dehydrogenase, 89.8 0.28 9.7E-06 43.9 4.4 30 4-34 165-194 (351)
186 4e5n_A Thermostable phosphite 89.8 0.24 8.2E-06 43.9 3.9 30 4-34 146-175 (330)
187 3gvx_A Glycerate dehydrogenase 89.8 0.25 8.5E-06 43.1 4.0 30 4-34 123-152 (290)
188 3g0o_A 3-hydroxyisobutyrate de 89.8 0.34 1.2E-05 41.7 4.7 39 3-45 7-45 (303)
189 4hy3_A Phosphoglycerate oxidor 89.7 0.29 9.8E-06 44.2 4.4 30 4-34 177-206 (365)
190 3kb6_A D-lactate dehydrogenase 89.7 0.32 1.1E-05 43.2 4.6 31 4-36 142-172 (334)
191 2cuk_A Glycerate dehydrogenase 89.6 0.33 1.1E-05 42.5 4.7 30 4-34 145-174 (311)
192 3c24_A Putative oxidoreductase 89.5 0.38 1.3E-05 40.9 4.8 32 3-36 11-43 (286)
193 1wwk_A Phosphoglycerate dehydr 89.4 0.36 1.2E-05 42.2 4.7 30 4-34 143-172 (307)
194 4ezb_A Uncharacterized conserv 89.4 0.42 1.5E-05 41.6 5.1 33 2-34 23-55 (317)
195 3dtt_A NADP oxidoreductase; st 89.4 0.42 1.4E-05 39.9 4.9 31 3-34 19-49 (245)
196 2vns_A Metalloreductase steap3 89.4 0.35 1.2E-05 39.6 4.3 31 3-34 28-58 (215)
197 1j4a_A D-LDH, D-lactate dehydr 89.3 0.36 1.2E-05 42.7 4.7 30 4-34 147-176 (333)
198 2ekl_A D-3-phosphoglycerate de 89.3 0.37 1.3E-05 42.3 4.7 30 4-34 143-172 (313)
199 4gbj_A 6-phosphogluconate dehy 89.2 0.32 1.1E-05 42.2 4.1 31 3-34 5-35 (297)
200 3nkl_A UDP-D-quinovosamine 4-d 89.2 0.55 1.9E-05 35.2 5.0 34 3-36 4-37 (141)
201 2izz_A Pyrroline-5-carboxylate 89.0 0.33 1.1E-05 42.3 4.2 31 3-33 22-55 (322)
202 2wtb_A MFP2, fatty acid multif 88.9 0.76 2.6E-05 44.9 7.1 30 4-34 313-342 (725)
203 3oet_A Erythronate-4-phosphate 88.9 0.39 1.3E-05 43.7 4.7 30 4-34 120-149 (381)
204 3qha_A Putative oxidoreductase 88.9 0.29 9.9E-06 42.1 3.7 31 3-34 15-45 (296)
205 2o4c_A Erythronate-4-phosphate 88.9 0.39 1.3E-05 43.6 4.7 30 4-34 117-146 (380)
206 2w2k_A D-mandelate dehydrogena 88.9 0.42 1.4E-05 42.5 4.8 30 4-34 164-194 (348)
207 3doj_A AT3G25530, dehydrogenas 88.8 0.48 1.6E-05 41.0 5.0 32 3-36 21-52 (310)
208 1sc6_A PGDH, D-3-phosphoglycer 88.8 0.4 1.4E-05 43.7 4.7 30 4-34 146-175 (404)
209 3l6d_A Putative oxidoreductase 88.8 0.38 1.3E-05 41.6 4.4 40 3-46 9-48 (306)
210 1evy_A Glycerol-3-phosphate de 88.5 0.35 1.2E-05 42.5 4.0 33 1-34 12-45 (366)
211 2iz1_A 6-phosphogluconate dehy 88.5 0.38 1.3E-05 44.5 4.4 34 1-36 3-36 (474)
212 2cvz_A Dehydrogenase, 3-hydrox 88.5 0.35 1.2E-05 40.6 3.9 30 4-36 2-31 (289)
213 2g1u_A Hypothetical protein TM 88.5 0.67 2.3E-05 35.6 5.2 32 3-35 19-50 (155)
214 2gcg_A Glyoxylate reductase/hy 88.5 0.41 1.4E-05 42.1 4.4 30 4-34 156-185 (330)
215 2hmt_A YUAA protein; RCK, KTN, 88.5 0.39 1.3E-05 35.5 3.7 30 4-34 7-36 (144)
216 3mw9_A GDH 1, glutamate dehydr 88.4 4.4 0.00015 38.1 11.5 32 4-36 245-276 (501)
217 3ba1_A HPPR, hydroxyphenylpyru 88.3 0.4 1.4E-05 42.5 4.3 29 4-33 165-193 (333)
218 3slg_A PBGP3 protein; structur 88.3 0.43 1.5E-05 41.4 4.4 36 1-36 22-58 (372)
219 3tl2_A Malate dehydrogenase; c 88.3 0.3 1E-05 43.1 3.4 32 3-36 8-40 (315)
220 4dll_A 2-hydroxy-3-oxopropiona 88.3 0.48 1.6E-05 41.2 4.7 37 3-43 31-67 (320)
221 4e12_A Diketoreductase; oxidor 88.2 0.57 1.9E-05 39.9 5.0 40 1-44 1-41 (283)
222 2dbq_A Glyoxylate reductase; D 88.2 0.48 1.6E-05 41.8 4.7 30 4-34 151-180 (334)
223 1y1p_A ARII, aldehyde reductas 88.1 5.2 0.00018 33.6 11.1 32 3-35 11-43 (342)
224 2g5c_A Prephenate dehydrogenas 88.1 0.55 1.9E-05 39.5 4.9 32 4-36 2-34 (281)
225 3c85_A Putative glutathione-re 88.1 0.42 1.4E-05 37.6 3.9 32 4-35 40-71 (183)
226 1yb4_A Tartronic semialdehyde 88.1 0.33 1.1E-05 41.0 3.5 30 4-34 4-33 (295)
227 2uyy_A N-PAC protein; long-cha 88.1 0.48 1.6E-05 40.7 4.5 30 3-33 30-59 (316)
228 2d0i_A Dehydrogenase; structur 88.0 0.45 1.5E-05 42.0 4.4 30 4-34 147-176 (333)
229 3ghy_A Ketopantoate reductase 88.0 0.46 1.6E-05 41.5 4.4 33 1-34 1-33 (335)
230 2v6b_A L-LDH, L-lactate dehydr 87.9 2 6.8E-05 37.1 8.4 32 4-36 1-33 (304)
231 2nac_A NAD-dependent formate d 87.8 0.46 1.6E-05 43.3 4.4 30 4-34 192-221 (393)
232 3l4b_C TRKA K+ channel protien 87.8 0.4 1.4E-05 38.9 3.7 31 4-35 1-31 (218)
233 4fcc_A Glutamate dehydrogenase 87.7 0.79 2.7E-05 42.6 5.9 102 4-123 236-347 (450)
234 3ldh_A Lactate dehydrogenase; 87.6 1.7 6E-05 38.5 8.0 33 4-36 22-54 (330)
235 3k92_A NAD-GDH, NAD-specific g 87.6 0.92 3.1E-05 41.8 6.3 34 3-37 221-254 (424)
236 2x0j_A Malate dehydrogenase; o 87.6 0.52 1.8E-05 41.2 4.4 33 4-36 1-33 (294)
237 2h78_A Hibadh, 3-hydroxyisobut 87.6 0.52 1.8E-05 40.2 4.4 38 4-45 4-41 (302)
238 2o3j_A UDP-glucose 6-dehydroge 87.5 0.44 1.5E-05 44.2 4.1 33 2-34 8-41 (481)
239 3qsg_A NAD-binding phosphogluc 87.5 0.44 1.5E-05 41.3 3.9 32 3-36 24-56 (312)
240 3pqe_A L-LDH, L-lactate dehydr 87.4 0.58 2E-05 41.4 4.7 34 3-36 5-38 (326)
241 3pef_A 6-phosphogluconate dehy 87.0 0.67 2.3E-05 39.3 4.7 31 4-36 2-32 (287)
242 3nep_X Malate dehydrogenase; h 86.9 1.6 5.4E-05 38.4 7.2 33 4-36 1-33 (314)
243 2j6i_A Formate dehydrogenase; 86.8 0.54 1.8E-05 42.2 4.2 30 4-34 165-195 (364)
244 4gwg_A 6-phosphogluconate dehy 86.7 0.54 1.8E-05 44.0 4.3 42 1-46 2-43 (484)
245 2q3e_A UDP-glucose 6-dehydroge 86.7 0.52 1.8E-05 43.4 4.1 34 1-34 2-37 (467)
246 3dfz_A SIRC, precorrin-2 dehyd 86.7 3.2 0.00011 34.7 8.7 30 4-34 32-61 (223)
247 3k5p_A D-3-phosphoglycerate de 86.6 0.63 2.2E-05 42.8 4.6 30 4-34 157-186 (416)
248 3d4o_A Dipicolinate synthase s 86.6 0.73 2.5E-05 39.6 4.8 30 4-34 156-185 (293)
249 3hwr_A 2-dehydropantoate 2-red 86.6 4.7 0.00016 34.8 10.1 30 3-33 19-48 (318)
250 1hdo_A Biliverdin IX beta redu 86.6 0.97 3.3E-05 35.3 5.2 34 1-35 1-35 (206)
251 3aoe_E Glutamate dehydrogenase 86.5 0.92 3.1E-05 41.8 5.6 33 3-36 218-250 (419)
252 3pdu_A 3-hydroxyisobutyrate de 86.4 0.45 1.5E-05 40.4 3.3 30 4-34 2-31 (287)
253 2zyd_A 6-phosphogluconate dehy 86.3 0.58 2E-05 43.4 4.3 33 1-34 13-45 (480)
254 1v9l_A Glutamate dehydrogenase 86.2 2.1 7.2E-05 39.4 7.9 33 3-36 210-242 (421)
255 3gg2_A Sugar dehydrogenase, UD 86.2 0.7 2.4E-05 42.5 4.7 40 3-46 2-41 (450)
256 2rir_A Dipicolinate synthase, 86.1 0.8 2.7E-05 39.4 4.8 30 4-34 158-187 (300)
257 2f1k_A Prephenate dehydrogenas 86.1 0.79 2.7E-05 38.4 4.7 36 4-43 1-36 (279)
258 3obb_A Probable 3-hydroxyisobu 86.0 0.74 2.5E-05 40.0 4.5 39 4-46 4-42 (300)
259 3two_A Mannitol dehydrogenase; 86.0 1.9 6.4E-05 37.5 7.2 127 4-168 178-308 (348)
260 1i36_A Conserved hypothetical 85.6 0.87 3E-05 37.8 4.7 30 5-36 2-31 (264)
261 2raf_A Putative dinucleotide-b 85.3 0.96 3.3E-05 36.8 4.7 30 3-33 19-48 (209)
262 3oj0_A Glutr, glutamyl-tRNA re 85.2 0.48 1.6E-05 35.9 2.6 31 4-36 22-52 (144)
263 1jay_A Coenzyme F420H2:NADP+ o 84.6 1.2 4.1E-05 35.6 4.9 30 4-34 1-31 (212)
264 1ygy_A PGDH, D-3-phosphoglycer 84.3 0.96 3.3E-05 42.5 4.8 32 4-37 143-174 (529)
265 3dfu_A Uncharacterized protein 84.1 0.37 1.3E-05 40.8 1.7 33 3-36 6-38 (232)
266 4aj2_A L-lactate dehydrogenase 84.1 2.8 9.6E-05 37.1 7.5 34 3-36 19-52 (331)
267 2gf2_A Hibadh, 3-hydroxyisobut 84.1 0.81 2.8E-05 38.7 3.8 30 5-36 2-31 (296)
268 2qyt_A 2-dehydropantoate 2-red 83.7 0.7 2.4E-05 39.3 3.3 32 3-34 8-44 (317)
269 3r6d_A NAD-dependent epimerase 83.3 1.3 4.5E-05 35.4 4.7 33 2-35 4-38 (221)
270 1ks9_A KPA reductase;, 2-dehyd 83.3 1.3 4.3E-05 37.0 4.7 30 4-34 1-30 (291)
271 1x0v_A GPD-C, GPDH-C, glycerol 83.2 0.7 2.4E-05 40.2 3.2 25 1-25 6-30 (354)
272 1guz_A Malate dehydrogenase; o 83.1 1 3.4E-05 39.1 4.1 30 4-33 1-31 (310)
273 1z82_A Glycerol-3-phosphate de 83.0 1.3 4.3E-05 38.5 4.7 32 2-34 13-44 (335)
274 2fp4_A Succinyl-COA ligase [GD 83.0 2.2 7.6E-05 37.2 6.3 86 4-123 14-101 (305)
275 3jv7_A ADH-A; dehydrogenase, n 82.8 2.9 9.9E-05 36.2 7.0 131 4-169 173-311 (345)
276 2yjz_A Metalloreductase steap4 83.5 0.25 8.4E-06 40.5 0.0 31 2-33 18-48 (201)
277 1yqg_A Pyrroline-5-carboxylate 82.8 1.4 5E-05 36.4 4.8 32 4-36 1-32 (263)
278 2pv7_A T-protein [includes: ch 82.7 1.2 4.1E-05 38.2 4.4 29 4-33 22-51 (298)
279 3i83_A 2-dehydropantoate 2-red 82.5 1.4 4.7E-05 38.1 4.7 32 3-35 2-33 (320)
280 2csu_A 457AA long hypothetical 82.4 6.1 0.00021 36.3 9.3 83 3-123 8-94 (457)
281 3l9w_A Glutathione-regulated p 82.2 1.5 5.1E-05 39.9 5.0 39 4-46 5-43 (413)
282 3c7a_A Octopine dehydrogenase; 82.2 1.2 4.1E-05 39.7 4.3 32 3-34 2-33 (404)
283 3fpc_A NADP-dependent alcohol 82.1 4.6 0.00016 35.0 8.0 92 4-118 168-260 (352)
284 2hun_A 336AA long hypothetical 81.6 1.4 4.7E-05 37.4 4.3 35 1-35 1-37 (336)
285 3ktd_A Prephenate dehydrogenas 81.5 1.3 4.6E-05 39.3 4.3 38 3-44 8-45 (341)
286 3m2p_A UDP-N-acetylglucosamine 81.4 1.7 6E-05 36.5 4.9 33 1-35 1-34 (311)
287 1xq6_A Unknown protein; struct 81.4 2.2 7.5E-05 34.2 5.3 35 1-35 2-38 (253)
288 2tmg_A Protein (glutamate dehy 81.3 2 6.9E-05 39.4 5.5 97 3-125 209-314 (415)
289 3phh_A Shikimate dehydrogenase 81.1 12 0.0004 32.1 10.1 32 4-36 119-150 (269)
290 3d64_A Adenosylhomocysteinase; 81.0 1.5 5.2E-05 41.1 4.7 31 4-36 278-308 (494)
291 1np3_A Ketol-acid reductoisome 81.0 1.4 4.8E-05 38.7 4.3 30 4-34 17-46 (338)
292 2dpo_A L-gulonate 3-dehydrogen 81.0 1.5 5.3E-05 38.4 4.5 40 3-46 6-45 (319)
293 1c1d_A L-phenylalanine dehydro 80.9 1.7 5.8E-05 39.0 4.8 31 4-36 176-206 (355)
294 2i99_A MU-crystallin homolog; 80.9 1.8 6.2E-05 37.5 4.9 33 4-36 136-168 (312)
295 1e6u_A GDP-fucose synthetase; 80.8 1.4 4.9E-05 37.0 4.2 33 1-34 1-34 (321)
296 1f0y_A HCDH, L-3-hydroxyacyl-C 80.8 1.9 6.6E-05 36.7 5.0 32 3-36 15-46 (302)
297 1leh_A Leucine dehydrogenase; 80.5 2.1 7.2E-05 38.4 5.3 36 4-43 174-209 (364)
298 3ew7_A LMO0794 protein; Q8Y8U8 80.3 2.1 7.3E-05 33.7 4.8 31 4-35 1-32 (221)
299 3g79_A NDP-N-acetyl-D-galactos 79.7 1.8 6.3E-05 40.2 4.8 32 3-34 18-50 (478)
300 3h2s_A Putative NADH-flavin re 79.4 2.4 8.1E-05 33.6 4.8 30 5-35 2-32 (224)
301 3hn2_A 2-dehydropantoate 2-red 79.2 1.5 5E-05 37.8 3.7 32 3-35 2-33 (312)
302 3g17_A Similar to 2-dehydropan 79.2 1.1 3.7E-05 38.3 2.9 31 3-34 2-32 (294)
303 2hjr_A Malate dehydrogenase; m 79.1 2.8 9.7E-05 36.7 5.6 34 2-36 13-46 (328)
304 2ewd_A Lactate dehydrogenase,; 78.9 2.1 7.1E-05 37.1 4.6 35 1-36 1-36 (317)
305 4g65_A TRK system potassium up 78.7 1.8 6.1E-05 39.9 4.4 40 3-46 3-42 (461)
306 1v8b_A Adenosylhomocysteinase; 78.6 1.5 5.3E-05 40.9 3.9 30 4-34 258-287 (479)
307 1yqd_A Sinapyl alcohol dehydro 78.5 1.7 5.9E-05 38.2 4.1 31 4-35 189-219 (366)
308 3pid_A UDP-glucose 6-dehydroge 78.4 2.2 7.5E-05 39.2 4.8 39 3-46 36-74 (432)
309 2pgd_A 6-phosphogluconate dehy 77.9 1.8 6.2E-05 39.9 4.2 30 4-34 3-32 (482)
310 1txg_A Glycerol-3-phosphate de 77.9 1.9 6.5E-05 36.9 4.0 29 5-34 2-30 (335)
311 4b4o_A Epimerase family protei 77.8 2.6 8.9E-05 35.3 4.8 31 4-35 1-32 (298)
312 3ruf_A WBGU; rossmann fold, UD 77.8 2.2 7.6E-05 36.4 4.5 33 2-35 24-57 (351)
313 2a35_A Hypothetical protein PA 77.7 2.2 7.4E-05 33.6 4.1 32 3-34 5-38 (215)
314 3h9u_A Adenosylhomocysteinase; 77.6 2.3 7.8E-05 39.4 4.7 31 4-36 212-242 (436)
315 4g65_A TRK system potassium up 77.5 1.4 4.8E-05 40.6 3.3 93 4-123 236-331 (461)
316 3n58_A Adenosylhomocysteinase; 77.5 2.3 7.7E-05 39.7 4.6 29 4-33 248-276 (464)
317 3k96_A Glycerol-3-phosphate de 77.0 2.4 8.3E-05 37.6 4.6 30 3-33 29-58 (356)
318 3sc6_A DTDP-4-dehydrorhamnose 76.9 1.7 5.8E-05 36.0 3.3 32 3-35 5-37 (287)
319 1pgj_A 6PGDH, 6-PGDH, 6-phosph 76.8 2 6.8E-05 39.7 4.1 30 4-34 2-31 (478)
320 2p4q_A 6-phosphogluconate dehy 76.7 2.1 7.2E-05 39.9 4.2 31 3-34 10-40 (497)
321 4dvj_A Putative zinc-dependent 76.5 1.7 5.7E-05 38.3 3.3 92 4-119 173-265 (363)
322 3vps_A TUNA, NAD-dependent epi 76.3 2.8 9.5E-05 35.0 4.6 32 3-35 7-39 (321)
323 2d4a_B Malate dehydrogenase; a 76.3 1.5 5E-05 38.3 2.8 31 5-36 1-31 (308)
324 1omo_A Alanine dehydrogenase; 76.1 3 0.0001 36.4 4.8 38 4-43 126-163 (322)
325 4b8w_A GDP-L-fucose synthase; 75.9 2.3 7.8E-05 35.2 3.9 26 1-26 4-30 (319)
326 3mwd_B ATP-citrate synthase; A 75.8 6.3 0.00022 35.0 6.9 96 3-125 10-113 (334)
327 3kkj_A Amine oxidase, flavin-c 75.8 2.9 9.9E-05 32.1 4.2 32 2-34 1-32 (336)
328 3eag_A UDP-N-acetylmuramate:L- 75.6 14 0.00049 31.8 9.1 86 4-118 5-91 (326)
329 1mv8_A GMD, GDP-mannose 6-dehy 75.6 2.5 8.5E-05 38.3 4.3 37 4-44 1-37 (436)
330 3ip1_A Alcohol dehydrogenase, 75.4 11 0.00037 33.4 8.5 30 4-34 215-245 (404)
331 4h7p_A Malate dehydrogenase; s 75.4 4.9 0.00017 35.8 6.1 26 1-26 22-48 (345)
332 2wm3_A NMRA-like family domain 75.3 2.9 0.0001 34.9 4.4 33 3-35 5-38 (299)
333 4ej6_A Putative zinc-binding d 75.2 10 0.00034 33.3 8.1 99 4-125 184-284 (370)
334 1y7t_A Malate dehydrogenase; N 74.9 3.1 0.0001 36.0 4.6 34 1-34 1-42 (327)
335 1q0q_A 1-deoxy-D-xylulose 5-ph 74.7 3.1 0.00011 38.0 4.7 112 4-125 10-132 (406)
336 3goh_A Alcohol dehydrogenase, 74.4 2.9 0.0001 35.6 4.3 30 4-34 144-173 (315)
337 1piw_A Hypothetical zinc-type 74.3 8 0.00027 33.6 7.2 31 4-35 181-211 (360)
338 3q2o_A Phosphoribosylaminoimid 74.2 3.9 0.00013 36.1 5.2 30 4-34 15-44 (389)
339 1zej_A HBD-9, 3-hydroxyacyl-CO 74.0 3.6 0.00012 35.7 4.7 74 4-106 13-86 (293)
340 2dq4_A L-threonine 3-dehydroge 73.8 4.9 0.00017 34.7 5.6 135 5-169 167-305 (343)
341 1ff9_A Saccharopine reductase; 73.6 3.5 0.00012 37.8 4.8 33 1-34 1-33 (450)
342 2axq_A Saccharopine dehydrogen 73.5 3.2 0.00011 38.4 4.5 32 3-34 23-54 (467)
343 1zcj_A Peroxisomal bifunctiona 73.3 3.9 0.00013 37.5 5.1 32 3-36 37-68 (463)
344 3h5n_A MCCB protein; ubiquitin 73.3 7.2 0.00025 34.5 6.7 41 3-44 118-159 (353)
345 2d5c_A AROE, shikimate 5-dehyd 73.1 3.2 0.00011 34.7 4.1 30 5-36 118-147 (263)
346 3gvp_A Adenosylhomocysteinase 72.9 3.5 0.00012 38.1 4.6 31 4-36 221-251 (435)
347 4egb_A DTDP-glucose 4,6-dehydr 72.9 3.1 0.00011 35.4 4.1 33 3-35 24-58 (346)
348 1dlj_A UDP-glucose dehydrogena 72.5 3.3 0.00011 37.2 4.3 29 4-34 1-29 (402)
349 1yj8_A Glycerol-3-phosphate de 72.5 2.2 7.4E-05 37.7 3.0 23 3-25 21-43 (375)
350 3st7_A Capsular polysaccharide 72.4 3.6 0.00012 35.6 4.4 43 4-47 1-44 (369)
351 3mog_A Probable 3-hydroxybutyr 72.3 3.3 0.00011 38.4 4.3 40 3-46 5-44 (483)
352 4a2c_A Galactitol-1-phosphate 72.1 12 0.00042 31.9 7.8 97 4-123 162-258 (346)
353 3k5i_A Phosphoribosyl-aminoimi 72.1 5.1 0.00017 35.8 5.5 32 3-35 24-55 (403)
354 1uuf_A YAHK, zinc-type alcohol 72.0 3.1 0.00011 36.7 3.9 133 4-168 196-329 (369)
355 2y1e_A 1-deoxy-D-xylulose 5-ph 71.9 4.2 0.00014 37.1 4.8 111 4-125 22-136 (398)
356 3uog_A Alcohol dehydrogenase; 71.9 6.8 0.00023 34.2 6.1 149 4-182 191-340 (363)
357 2b69_A UDP-glucuronate decarbo 71.8 4.6 0.00016 34.4 4.9 32 3-35 27-59 (343)
358 3orq_A N5-carboxyaminoimidazol 71.7 4.8 0.00017 35.5 5.2 31 3-34 12-42 (377)
359 3gvi_A Malate dehydrogenase; N 71.6 4.7 0.00016 35.4 5.0 35 1-36 5-39 (324)
360 1oc2_A DTDP-glucose 4,6-dehydr 71.6 3.8 0.00013 34.8 4.3 33 3-35 4-38 (348)
361 1y6j_A L-lactate dehydrogenase 71.2 4.5 0.00015 35.2 4.7 34 3-36 7-40 (318)
362 7mdh_A Protein (malate dehydro 71.2 4.9 0.00017 36.3 5.1 24 3-26 32-56 (375)
363 2ydy_A Methionine adenosyltran 70.5 5.1 0.00017 33.5 4.8 31 3-34 2-33 (315)
364 2d8a_A PH0655, probable L-thre 70.3 5.1 0.00017 34.7 4.9 29 5-34 170-199 (348)
365 1xa0_A Putative NADPH dependen 70.2 9.3 0.00032 32.6 6.5 30 5-35 152-182 (328)
366 1pjq_A CYSG, siroheme synthase 70.2 18 0.00061 33.0 8.8 94 4-127 13-107 (457)
367 2yy7_A L-threonine dehydrogena 70.1 3.2 0.00011 34.6 3.5 33 3-35 2-36 (312)
368 2x4g_A Nucleoside-diphosphate- 70.0 5.6 0.00019 33.6 5.0 31 4-35 14-45 (342)
369 2c20_A UDP-glucose 4-epimerase 70.0 5.4 0.00018 33.5 4.9 31 4-35 2-33 (330)
370 1pzg_A LDH, lactate dehydrogen 69.7 5 0.00017 35.2 4.7 33 3-36 9-41 (331)
371 3h8v_A Ubiquitin-like modifier 69.5 2.3 8E-05 37.0 2.5 32 3-35 36-67 (292)
372 1sb8_A WBPP; epimerase, 4-epim 69.3 4.7 0.00016 34.4 4.5 32 3-35 27-59 (352)
373 3uko_A Alcohol dehydrogenase c 69.3 8.4 0.00029 33.7 6.2 30 4-34 195-225 (378)
374 2vhw_A Alanine dehydrogenase; 69.2 5.2 0.00018 35.6 4.8 30 4-34 169-198 (377)
375 3au8_A 1-deoxy-D-xylulose 5-ph 68.5 4.2 0.00014 38.0 4.0 113 3-125 77-204 (488)
376 3ado_A Lambda-crystallin; L-gu 68.2 6.2 0.00021 34.7 5.0 36 4-43 7-42 (319)
377 2z1m_A GDP-D-mannose dehydrata 68.2 5.8 0.0002 33.3 4.7 34 1-35 1-35 (345)
378 2ph5_A Homospermidine synthase 68.1 3.5 0.00012 38.5 3.5 99 3-126 13-114 (480)
379 3ce6_A Adenosylhomocysteinase; 67.8 5.2 0.00018 37.4 4.6 30 4-34 275-304 (494)
380 1hyh_A L-hicdh, L-2-hydroxyiso 67.5 5.6 0.00019 34.1 4.5 32 4-36 2-34 (309)
381 1ez4_A Lactate dehydrogenase; 67.5 5.3 0.00018 34.8 4.4 34 3-36 5-38 (318)
382 1orr_A CDP-tyvelose-2-epimeras 67.5 6 0.00021 33.3 4.7 30 4-34 2-32 (347)
383 3m6i_A L-arabinitol 4-dehydrog 67.4 19 0.00065 31.1 8.1 100 4-124 181-282 (363)
384 2y0c_A BCEC, UDP-glucose dehyd 67.4 5.4 0.00019 36.8 4.7 40 3-46 8-47 (478)
385 2bll_A Protein YFBG; decarboxy 67.4 6.7 0.00023 33.0 4.9 31 5-35 2-33 (345)
386 2z2v_A Hypothetical protein PH 66.8 5.8 0.0002 35.3 4.6 93 3-126 16-108 (365)
387 1x7d_A Ornithine cyclodeaminas 66.8 5.7 0.00019 35.2 4.5 38 4-43 130-167 (350)
388 2hk9_A Shikimate dehydrogenase 66.8 5 0.00017 33.9 4.0 31 4-36 130-160 (275)
389 3fi9_A Malate dehydrogenase; s 66.5 6.2 0.00021 35.0 4.7 35 1-36 6-42 (343)
390 1ek6_A UDP-galactose 4-epimera 66.3 6.5 0.00022 33.3 4.7 33 2-35 1-34 (348)
391 3k6j_A Protein F01G10.3, confi 66.2 6.7 0.00023 36.3 5.0 31 3-34 54-84 (460)
392 2cf5_A Atccad5, CAD, cinnamyl 66.2 3.5 0.00012 36.0 3.0 31 4-35 182-212 (357)
393 2bka_A CC3, TAT-interacting pr 65.8 5.4 0.00018 32.0 3.9 33 3-35 18-52 (242)
394 3zwc_A Peroxisomal bifunctiona 65.8 8.9 0.0003 37.6 6.0 145 4-171 317-486 (742)
395 3qwb_A Probable quinone oxidor 65.7 7.6 0.00026 33.3 5.0 31 4-35 150-181 (334)
396 2b5w_A Glucose dehydrogenase; 65.5 13 0.00046 32.1 6.7 31 4-35 174-207 (357)
397 2aef_A Calcium-gated potassium 65.4 3.5 0.00012 33.5 2.7 29 3-33 9-37 (234)
398 1e3j_A NADP(H)-dependent ketos 65.4 22 0.00074 30.6 8.0 30 4-34 170-199 (352)
399 1p0f_A NADP-dependent alcohol 65.4 12 0.0004 32.7 6.3 30 4-34 193-223 (373)
400 3sxp_A ADP-L-glycero-D-mannohe 65.3 8.1 0.00028 33.1 5.2 33 3-35 10-44 (362)
401 3ouz_A Biotin carboxylase; str 65.2 5.3 0.00018 35.9 4.1 33 1-34 4-36 (446)
402 1b8p_A Protein (malate dehydro 65.1 6.3 0.00022 34.3 4.4 24 3-26 5-29 (329)
403 2gas_A Isoflavone reductase; N 64.8 4.8 0.00016 33.5 3.5 31 4-35 3-34 (307)
404 2q1s_A Putative nucleotide sug 64.3 7.6 0.00026 33.7 4.8 32 4-35 33-65 (377)
405 2q1w_A Putative nucleotide sug 63.7 8.4 0.00029 32.7 4.9 32 3-35 21-53 (333)
406 3lk7_A UDP-N-acetylmuramoylala 63.2 34 0.0012 30.8 9.1 31 4-36 10-40 (451)
407 2c5a_A GDP-mannose-3', 5'-epim 63.1 9.3 0.00032 33.2 5.2 32 3-35 29-61 (379)
408 3hdj_A Probable ornithine cycl 63.0 8.1 0.00028 33.6 4.7 34 4-37 122-155 (313)
409 2vn8_A Reticulon-4-interacting 62.9 9.8 0.00034 33.2 5.3 31 4-35 185-216 (375)
410 1rkx_A CDP-glucose-4,6-dehydra 62.9 7.4 0.00025 33.2 4.4 32 3-35 9-41 (357)
411 3jyn_A Quinone oxidoreductase; 62.9 6.2 0.00021 33.7 3.9 31 4-35 142-173 (325)
412 2jhf_A Alcohol dehydrogenase E 62.8 21 0.00071 31.0 7.4 30 4-34 193-223 (374)
413 1rjw_A ADH-HT, alcohol dehydro 62.5 9.3 0.00032 32.9 5.0 30 4-34 166-195 (339)
414 1x13_A NAD(P) transhydrogenase 62.5 7.7 0.00026 34.9 4.6 31 4-36 173-203 (401)
415 3gqv_A Enoyl reductase; medium 62.4 21 0.00071 31.2 7.3 31 4-35 166-197 (371)
416 1f8f_A Benzyl alcohol dehydrog 62.3 5.5 0.00019 34.8 3.5 30 4-34 192-222 (371)
417 3vku_A L-LDH, L-lactate dehydr 62.1 8.4 0.00029 33.9 4.7 34 3-36 9-42 (326)
418 1t2a_A GDP-mannose 4,6 dehydra 61.9 9.3 0.00032 32.9 4.9 31 4-35 25-56 (375)
419 1gpj_A Glutamyl-tRNA reductase 61.8 6.9 0.00023 35.1 4.1 30 4-34 168-198 (404)
420 2x6t_A ADP-L-glycero-D-manno-h 61.8 7.9 0.00027 33.1 4.4 32 4-35 47-79 (357)
421 1xgk_A Nitrogen metabolite rep 61.8 8.5 0.00029 33.4 4.7 32 3-35 5-37 (352)
422 3s2e_A Zinc-containing alcohol 61.7 7.3 0.00025 33.5 4.2 132 4-168 168-303 (340)
423 1e3i_A Alcohol dehydrogenase, 61.6 16 0.00055 31.8 6.4 30 4-34 197-227 (376)
424 3fr7_A Putative ketol-acid red 61.6 7.3 0.00025 36.8 4.3 32 4-35 55-91 (525)
425 1l7d_A Nicotinamide nucleotide 60.8 8.8 0.0003 34.1 4.6 31 4-36 173-203 (384)
426 2zqz_A L-LDH, L-lactate dehydr 60.3 9.5 0.00032 33.4 4.7 34 3-36 9-42 (326)
427 3krt_A Crotonyl COA reductase; 60.1 11 0.00037 34.0 5.2 39 4-46 230-269 (456)
428 3p2y_A Alanine dehydrogenase/p 59.9 7.2 0.00025 35.3 3.9 31 4-36 185-215 (381)
429 1oju_A MDH, malate dehydrogena 59.8 10 0.00035 32.8 4.7 33 4-36 1-33 (294)
430 2fzw_A Alcohol dehydrogenase c 59.7 17 0.00057 31.6 6.2 30 4-34 192-222 (373)
431 3fbg_A Putative arginate lyase 59.7 9 0.00031 33.1 4.4 90 4-118 152-242 (346)
432 4ea9_A Perosamine N-acetyltran 59.7 12 0.00041 30.1 4.9 33 3-36 12-44 (220)
433 2eez_A Alanine dehydrogenase; 59.7 10 0.00034 33.5 4.8 30 4-34 167-196 (369)
434 3ehe_A UDP-glucose 4-epimerase 59.6 7.7 0.00026 32.4 3.8 30 4-35 2-32 (313)
435 1a5z_A L-lactate dehydrogenase 59.5 8.9 0.0003 33.1 4.3 32 4-36 1-33 (319)
436 3enk_A UDP-glucose 4-epimerase 59.1 12 0.00041 31.5 5.0 32 3-35 5-37 (341)
437 3oh8_A Nucleoside-diphosphate 59.1 11 0.00037 34.6 5.0 32 3-35 147-179 (516)
438 1kew_A RMLB;, DTDP-D-glucose 4 58.9 9.1 0.00031 32.5 4.2 31 5-35 2-33 (361)
439 1cdo_A Alcohol dehydrogenase; 58.8 23 0.00077 30.8 6.9 30 4-34 194-224 (374)
440 1n7h_A GDP-D-mannose-4,6-dehyd 58.4 12 0.0004 32.3 4.9 31 4-35 29-60 (381)
441 2pzm_A Putative nucleotide sug 58.2 12 0.00041 31.7 4.9 32 3-35 20-52 (330)
442 2hrz_A AGR_C_4963P, nucleoside 58.0 8.4 0.00029 32.5 3.9 34 2-35 13-53 (342)
443 3ko8_A NAD-dependent epimerase 57.9 11 0.00039 31.2 4.6 31 4-35 1-32 (312)
444 1rpn_A GDP-mannose 4,6-dehydra 57.8 12 0.00041 31.4 4.8 32 3-35 14-46 (335)
445 4hb9_A Similarities with proba 57.8 12 0.0004 32.1 4.8 29 4-33 2-30 (412)
446 1smk_A Malate dehydrogenase, g 57.7 10 0.00035 33.0 4.4 31 3-33 8-40 (326)
447 3bfp_A Acetyltransferase; LEFT 57.7 9.5 0.00032 30.3 3.9 33 2-35 2-34 (194)
448 3nx4_A Putative oxidoreductase 57.0 17 0.00057 30.8 5.6 30 5-35 149-179 (324)
449 3ay3_A NAD-dependent epimerase 56.8 4.6 0.00016 33.1 1.9 33 1-35 1-34 (267)
450 3hhp_A Malate dehydrogenase; M 56.7 11 0.00039 32.8 4.5 22 4-25 1-23 (312)
451 4e4t_A Phosphoribosylaminoimid 56.5 13 0.00044 33.4 5.0 30 4-34 36-65 (419)
452 1vj0_A Alcohol dehydrogenase, 56.4 6.4 0.00022 34.6 2.9 139 4-168 197-341 (380)
453 4dio_A NAD(P) transhydrogenase 56.4 11 0.00039 34.2 4.6 31 4-36 191-221 (405)
454 2rh8_A Anthocyanidin reductase 56.0 13 0.00045 31.3 4.7 30 4-34 10-40 (338)
455 4a7p_A UDP-glucose dehydrogena 56.0 12 0.0004 34.4 4.7 31 3-34 8-38 (446)
456 3ax6_A Phosphoribosylaminoimid 55.7 14 0.00049 32.1 5.0 31 4-35 2-32 (380)
457 2r85_A PURP protein PF1517; AT 55.2 12 0.0004 31.6 4.3 30 3-34 2-31 (334)
458 3gms_A Putative NADPH:quinone 55.2 9.1 0.00031 32.9 3.6 31 4-35 146-177 (340)
459 4hv4_A UDP-N-acetylmuramate--L 55.2 45 0.0015 30.5 8.6 31 4-36 23-54 (494)
460 4gx0_A TRKA domain protein; me 54.5 12 0.0004 34.7 4.5 31 4-35 349-379 (565)
461 4id9_A Short-chain dehydrogena 54.3 12 0.00041 31.6 4.3 32 3-35 19-51 (347)
462 1z7e_A Protein aRNA; rossmann 54.1 13 0.00044 35.2 4.8 33 3-35 315-348 (660)
463 1db3_A GDP-mannose 4,6-dehydra 53.7 15 0.00053 31.2 4.9 31 4-35 2-33 (372)
464 2eih_A Alcohol dehydrogenase; 53.6 35 0.0012 29.1 7.2 137 4-169 168-307 (343)
465 4dim_A Phosphoribosylglycinami 52.9 14 0.00046 32.4 4.4 33 3-36 7-39 (403)
466 4a9w_A Monooxygenase; baeyer-v 52.8 14 0.00047 30.8 4.3 33 1-34 1-33 (357)
467 1o6z_A MDH, malate dehydrogena 52.7 17 0.00059 31.1 5.0 30 4-33 1-32 (303)
468 3vtf_A UDP-glucose 6-dehydroge 52.6 12 0.00041 34.5 4.2 39 4-46 22-60 (444)
469 2bi7_A UDP-galactopyranose mut 52.5 17 0.00057 32.0 5.0 33 1-34 1-33 (384)
470 1tt7_A YHFP; alcohol dehydroge 52.2 8.5 0.00029 32.8 2.9 31 5-36 153-184 (330)
471 2xxj_A L-LDH, L-lactate dehydr 51.7 18 0.00063 31.2 5.0 33 4-36 1-33 (310)
472 4ffl_A PYLC; amino acid, biosy 51.7 18 0.00063 31.1 5.0 30 4-34 2-31 (363)
473 1i24_A Sulfolipid biosynthesis 51.6 16 0.00055 31.5 4.6 32 3-35 11-43 (404)
474 2jl1_A Triphenylmethane reduct 51.2 9.7 0.00033 31.2 3.0 31 5-35 2-34 (287)
475 2pn1_A Carbamoylphosphate synt 51.2 13 0.00045 31.4 4.0 33 1-34 2-35 (331)
476 3rft_A Uronate dehydrogenase; 51.2 11 0.00039 30.9 3.5 33 1-34 1-34 (267)
477 1vl0_A DTDP-4-dehydrorhamnose 51.2 15 0.0005 30.2 4.2 31 3-34 12-43 (292)
478 1iow_A DD-ligase, DDLB, D-ALA\ 50.8 18 0.00061 30.0 4.7 32 3-35 2-42 (306)
479 4eye_A Probable oxidoreductase 50.7 19 0.00063 31.0 4.9 31 4-35 161-192 (342)
480 1wdk_A Fatty oxidation complex 50.7 11 0.00037 36.7 3.7 32 3-36 314-345 (715)
481 2p5y_A UDP-glucose 4-epimerase 50.5 19 0.00063 30.0 4.8 30 5-35 2-32 (311)
482 1eq2_A ADP-L-glycero-D-mannohe 50.5 17 0.00059 29.9 4.5 31 5-35 1-32 (310)
483 1n2s_A DTDP-4-, DTDP-glucose o 50.1 14 0.00048 30.4 3.9 29 5-35 2-31 (299)
484 1vkz_A Phosphoribosylamine--gl 50.0 18 0.00062 32.0 4.9 33 1-34 13-45 (412)
485 1mld_A Malate dehydrogenase; o 49.8 17 0.00058 31.4 4.5 33 4-36 1-34 (314)
486 3pi7_A NADH oxidoreductase; gr 49.7 30 0.001 29.7 6.1 30 5-35 167-197 (349)
487 2zcu_A Uncharacterized oxidore 49.7 14 0.00047 30.2 3.7 31 5-35 1-33 (286)
488 2dkn_A 3-alpha-hydroxysteroid 49.6 22 0.00074 28.3 4.9 30 5-35 3-33 (255)
489 4eez_A Alcohol dehydrogenase 1 49.6 23 0.00077 30.2 5.3 138 4-168 165-303 (348)
490 2jv8_A Uncharacterized protein 49.4 9.7 0.00033 25.4 2.2 30 59-90 11-40 (73)
491 2pk3_A GDP-6-deoxy-D-LYXO-4-he 49.4 20 0.00069 29.7 4.8 32 3-35 12-44 (321)
492 2bw0_A 10-FTHFDH, 10-formyltet 49.2 16 0.00053 32.2 4.2 34 1-35 20-53 (329)
493 3tqh_A Quinone oxidoreductase; 48.8 22 0.00075 30.1 5.0 31 4-35 154-185 (321)
494 3d1c_A Flavin-containing putat 48.7 19 0.00066 30.4 4.7 33 1-34 2-35 (369)
495 1jw9_B Molybdopterin biosynthe 48.6 27 0.00093 28.9 5.5 30 4-34 32-62 (249)
496 2z04_A Phosphoribosylaminoimid 48.5 18 0.00061 31.2 4.5 30 4-34 2-31 (365)
497 3d7l_A LIN1944 protein; APC893 48.4 22 0.00076 27.4 4.7 30 3-34 3-33 (202)
498 2gn4_A FLAA1 protein, UDP-GLCN 48.3 19 0.00065 30.9 4.6 33 3-35 21-55 (344)
499 1hye_A L-lactate/malate dehydr 48.0 21 0.00073 30.6 4.9 30 4-33 1-32 (313)
500 1yo6_A Putative carbonyl reduc 47.9 24 0.00081 28.0 4.9 35 1-35 1-37 (250)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.4e-79 Score=553.89 Aligned_cols=222 Identities=51% Similarity=0.897 Sum_probs=213.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||||||||||.++|++++++++++|||||++.|+++++|||||||+||+|+ ++++++ ++.|.|||++|++++++|
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHD-DKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEC-SSEEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEc-CCEEEECCEEEEEEeecc
Confidence 799999999999999999999889999999999899999999999999999999 999995 457999999999999999
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccccCCCCcEEEcCChhhHhHHHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPLA 163 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~~~~~~~IVSnaSCtTn~Lap~l 163 (227)
|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHhhhcCeeEEEEEEEeeccCCC------CCCCccccchhhhhh------------------hhccccceeeeccCchh
Q 027137 164 KVIHDKFGIVEGLMTTVHSITGIR------PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEPLR 219 (227)
Q Consensus 164 k~L~~~fgI~~~~~TTvha~t~~q------~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~~~ 219 (227)
|+|||+|||+++.||||||+|++| +++|||++|++++|| ||||++|+|++|+++++
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s 239 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVS 239 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCE
T ss_pred HHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCcE
Confidence 999999999999999999999999 358999999998765 99999999999999999
Q ss_pred hhhhcccC
Q 027137 220 LLERSCLL 227 (227)
Q Consensus 220 ~~~~~~~~ 227 (227)
++|++|.|
T Consensus 240 ~~dlt~~l 247 (332)
T 3pym_A 240 VVDLTVKL 247 (332)
T ss_dssp EEEEEEEE
T ss_pred eeEEEEEE
Confidence 99999975
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.9e-79 Score=554.05 Aligned_cols=226 Identities=73% Similarity=1.173 Sum_probs=215.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCc-ceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~-~v~~~~~~~l~i~gk~I~v~ 79 (227)
|.++||||||||||||.++|++++++++++|||||++.|+++++|||||||+||+|+ + ++++++++.|.|||++|+++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 656899999999999999999999889999999999899999999999999999999 9 99997663699999999999
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccccCCCCcEEEcCChhhHhH
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~~~~~~~IVSnaSCtTn~L 159 (227)
+++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeeccCCC-----C-CCCccccchhhhhh------------------hhccccceeeecc
Q 027137 160 APLAKVIHDKFGIVEGLMTTVHSITGIR-----P-KKLWMGHHQRIGEV------------------AGLLHSTSFLAVL 215 (227)
Q Consensus 160 ap~lk~L~~~fgI~~~~~TTvha~t~~q-----~-~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~ 215 (227)
+|++|+|||+|||+++.||||||+|++| + ++|||++|++++|| ||||++|+|++|+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSC
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCC
Confidence 9999999999999999999999999999 3 48999999998765 9999999999999
Q ss_pred CchhhhhhcccC
Q 027137 216 EPLRLLERSCLL 227 (227)
Q Consensus 216 ~~~~~~~~~~~~ 227 (227)
++++++|++|.|
T Consensus 240 ~~~s~~dlt~~l 251 (337)
T 3v1y_O 240 VDVSVVDLTVRI 251 (337)
T ss_dssp SSCEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999999999974
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.9e-78 Score=547.29 Aligned_cols=223 Identities=41% Similarity=0.645 Sum_probs=212.2
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|++||||||||||||.++|++++++++++||||| +.|+++++|||||||+||+|+ +++++++ +.|.|||++|+|+++
T Consensus 3 m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~-~~v~~~~-~~l~inGk~I~v~~e 79 (338)
T 3lvf_P 3 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVD-GGFRVNGKEVKSFSE 79 (338)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCS-SCEEEET-TEEEETTEEEEEECC
T ss_pred ccEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcC-CeEEEcC-CEEEECCEEEEEEEe
Confidence 3589999999999999999999988999999999 589999999999999999999 9999965 479999999999999
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeccCccccCCCCcEEEcCChhhHhHH
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~p~~V~gVN~~~~~~~~~IVSnaSCtTn~La 160 (227)
++|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|+++++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (338)
T 3lvf_P 80 PDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLA 159 (338)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHH
T ss_pred cccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhH
Confidence 99999999999999999999999999999999999999999999997 68999999999999988899999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CC-C-Cccccchhhhhh------------------hhccccceeeecc
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PK-K-LWMGHHQRIGEV------------------AGLLHSTSFLAVL 215 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~-~-d~r~~r~a~~~~------------------~~~~~~~~~~~~~ 215 (227)
|++|+|||+|||+++.||||||+|++| ++ | |||++|++++|| ||||++|+|++|+
T Consensus 160 p~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (338)
T 3lvf_P 160 PVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPV 239 (338)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCC
Confidence 999999999999999999999999999 44 4 999999998765 9999999999999
Q ss_pred CchhhhhhcccC
Q 027137 216 EPLRLLERSCLL 227 (227)
Q Consensus 216 ~~~~~~~~~~~~ 227 (227)
++++++|++|.|
T Consensus 240 ~~~s~~dlt~~l 251 (338)
T 3lvf_P 240 ATGSLTELTVVL 251 (338)
T ss_dssp SSCEEEEEEEEE
T ss_pred CceEEEEEEEEE
Confidence 999999999974
No 4
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.9e-78 Score=547.06 Aligned_cols=222 Identities=40% Similarity=0.677 Sum_probs=212.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||||||||||.++|+++++ +++++|||||+ .|+++++|||||||+||+|+ ++++++ ++.|.|||++|++++
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~ 78 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVA-GDTIDVGYGPIKVHA 78 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEEC-SSEEESSSSEEEEEC
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEe-cCEEEECCEEEEEEe
Confidence 58999999999999999999987 68999999999 69999999999999999999 999995 557999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCCCCcEEEcCChhhHhH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~~~~IVSnaSCtTn~L 159 (227)
++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++| +||||||||++.|+++++||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (335)
T 3doc_A 79 VRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158 (335)
T ss_dssp CSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhh
Confidence 9999999999999999999999999999999999999999999999987 699999999999998889999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeeccC
Q 027137 160 APLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLE 216 (227)
Q Consensus 160 ap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~ 216 (227)
+|++|+|||+|||+++.||||||+|++| +++|||++|++++|| ||||++|+|++|++
T Consensus 159 ap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 238 (335)
T 3doc_A 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTP 238 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCS
T ss_pred HHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCccccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEeccc
Confidence 9999999999999999999999999999 578999999987654 99999999999999
Q ss_pred chhhhhhcccC
Q 027137 217 PLRLLERSCLL 227 (227)
Q Consensus 217 ~~~~~~~~~~~ 227 (227)
+++++|++|.|
T Consensus 239 ~~s~~dlt~~l 249 (335)
T 3doc_A 239 NVSVVDLTFIA 249 (335)
T ss_dssp SCEEEEEEEEE
T ss_pred cccceEEEEEE
Confidence 99999999964
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2e-78 Score=550.44 Aligned_cols=225 Identities=43% Similarity=0.763 Sum_probs=213.3
Q ss_pred CccEEEEEccChHHHHHHHH----HHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEe-------CCCeEE
Q 027137 2 GKVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLL 70 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~----l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~-------~~~~l~ 70 (227)
|++||||||||||||.++|+ +++++++++||||||+.|+++++|||||||+||+|+ +++++. +++.|.
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~~l~ 79 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDDTLV 79 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCCEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCCEEE
Confidence 35899999999999999999 777788999999998899999999999999999999 999982 456799
Q ss_pred ECCEEEEEEe-ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeccCccccCC-CCc
Q 027137 71 FGEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELN 147 (227)
Q Consensus 71 i~gk~I~v~~-~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~p~~V~gVN~~~~~~-~~~ 147 (227)
|||++|+|++ +++|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ +++
T Consensus 80 inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~ 159 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHH 159 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCS
T ss_pred ECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCC
Confidence 9999999998 999999999999999999999999999999999999999999999997 7999999999999998 789
Q ss_pred EEEcCChhhHhHHHHHHHH-hhhcCeeEEEEEEEeeccCCC-----CC-CCccccchhhhhh------------------
Q 027137 148 IVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITGIR-----PK-KLWMGHHQRIGEV------------------ 202 (227)
Q Consensus 148 IVSnaSCtTn~Lap~lk~L-~~~fgI~~~~~TTvha~t~~q-----~~-~d~r~~r~a~~~~------------------ 202 (227)
||||||||||||+|++|+| ||+|||+++.||||||+|++| ++ +||||+|++++||
T Consensus 160 IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL 239 (359)
T 3ids_C 160 VVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPST 239 (359)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGG
T ss_pred EEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhh
Confidence 9999999999999999999 999999999999999999999 44 7999999998765
Q ss_pred hhccccceeeeccCchhhhhhcccC
Q 027137 203 AGLLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
||||++|+|++|+++++++|++|.|
T Consensus 240 ~gkltg~avRVPv~~vs~~dlt~~l 264 (359)
T 3ids_C 240 QGKLTGMSFRVPTPDVSVVDLTFTA 264 (359)
T ss_dssp TTSEEEEEEEESCSSCEEEEEEEEC
T ss_pred cCceEEEEEEcCCCCcEEEEEEEEE
Confidence 9999999999999999999999975
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=9.8e-78 Score=544.46 Aligned_cols=222 Identities=51% Similarity=0.940 Sum_probs=212.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
++||||||||||||.++|++++++ +++||||||+.|+++++|||||||+||+|+ ++++++ |+.|.+||++|+|++++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFR-NGQLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEc-CCEEEECCEEEEEEecC
Confidence 589999999999999999999886 999999999999999999999999999999 999996 45799999999999999
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccccCC-CCcEEEcCChhhHhHHH
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~~~~-~~~IVSnaSCtTn~Lap 161 (227)
+|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|++ +++||||||||||||+|
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred HHHHHhhhcCeeEEEEEEEeeccCCC------CCCCccccchhhhhh------------------hhccccceeeeccCc
Q 027137 162 LAKVIHDKFGIVEGLMTTVHSITGIR------PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEP 217 (227)
Q Consensus 162 ~lk~L~~~fgI~~~~~TTvha~t~~q------~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~ 217 (227)
++|+|||+|||+++.||||||+|++| ++||||++|++++|| ||||++|+|++|+++
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~ 243 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPD 243 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccccc
Confidence 99999999999999999999999999 358999999987665 999999999999999
Q ss_pred hhhhhhcccC
Q 027137 218 LRLLERSCLL 227 (227)
Q Consensus 218 ~~~~~~~~~~ 227 (227)
++++|++|.|
T Consensus 244 ~s~~dlt~~l 253 (346)
T 3h9e_O 244 VSVVDLTCRL 253 (346)
T ss_dssp CEEEEEEEEE
T ss_pred ceeEEEEEEE
Confidence 9999999974
No 7
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=4.3e-78 Score=545.89 Aligned_cols=222 Identities=39% Similarity=0.678 Sum_probs=204.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
++||||||||||||.++|++++++++++|||||+ .|+++++|||||||+||+|+ ++++++ ++.|.|||++|+|++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~-~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAF-EDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEC-SSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEc-CCEEEECCEEEEEeecC
Confidence 4899999999999999999999889999999999 69999999999999999999 999995 45799999999999999
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeccCccccCC-CCcEEEcCChhhHhHH
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~p~~V~gVN~~~~~~-~~~IVSnaSCtTn~La 160 (227)
+|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ .++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999999999999999999999999999999999999999997 5899999999999997 6899999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeeccCc
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEP 217 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~ 217 (227)
|++|+|||+|||+++.||||||+|++| +++|||++|++++|| ||||++|+|++|+++
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 240 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPN 240 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC-------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSS
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccccccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcc
Confidence 999999999999999999999999999 568999999987654 999999999999999
Q ss_pred hhhhhhcccC
Q 027137 218 LRLLERSCLL 227 (227)
Q Consensus 218 ~~~~~~~~~~ 227 (227)
++++|++|.|
T Consensus 241 ~s~~dlt~~l 250 (345)
T 4dib_A 241 VSLVDLVVDV 250 (345)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 9999999975
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=1.2e-75 Score=531.88 Aligned_cols=222 Identities=39% Similarity=0.704 Sum_probs=210.7
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|++||||||||||||.++|+++++ ++++|||||+ .|+++++|||||||+||+|+ ++++.+ |+.|.|||++|+++++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESR-DGAIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEE-TTEEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEc-CCEEEECCEEEEEEEc
Confidence 468999999999999999999998 7999999998 69999999999999999999 999985 4579999999999999
Q ss_pred cCCCCCCCccCCccEEEeecCcccC----HHhHHHHHh-CCCCEEEEeCCCCC-CCeEEeccCccccCCCCcEEEcCChh
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCT 155 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~----~~~a~~hl~-~GakkVIisaps~d-~p~~V~gVN~~~~~~~~~IVSnaSCt 155 (227)
+||+++||++.|+|||+||||.|++ +|+++.|++ +||||||||+|++| +||||||||++.|+++.+||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999999999999999999999 999999999 99999999999986 69999999999999878999999999
Q ss_pred hHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceee
Q 027137 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFL 212 (227)
Q Consensus 156 Tn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~ 212 (227)
||||+|++|+|||+|||+++.||||||+|++| ++|||||+|++++|| ||||++|+|+
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avR 255 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMR 255 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEE
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcccccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEE
Confidence 99999999999999999999999999999999 678999999997765 9999999999
Q ss_pred eccCchhhhhhcccC
Q 027137 213 AVLEPLRLLERSCLL 227 (227)
Q Consensus 213 ~~~~~~~~~~~~~~~ 227 (227)
+|+++++++|++|.|
T Consensus 256 VPv~~~s~~dlt~~l 270 (356)
T 3hja_A 256 VPVPTGSIVDLTVQL 270 (356)
T ss_dssp ESCSSCEEEEEEEEE
T ss_pred cCCCccEeEEEEEEE
Confidence 999999999999975
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=3.5e-73 Score=515.43 Aligned_cols=225 Identities=52% Similarity=0.898 Sum_probs=212.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
|.++||||||||||||+++|++++++++|+|+||||+.++++++|||||||+||+|+ ++++++ ++.|.++|+.|++++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~-~~~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHA-DGFLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEc-CCEEEECCEEEEEEE
Confidence 457899999999999999999999999999999998789999999999999999999 899996 456999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCCCCcEEEcCChhhHhH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~~~~IVSnaSCtTn~L 159 (227)
+++|++++|++.|+||||||||.|+++|+++.|+++||||||||+|+++ +||||||||++.|++.++||||||||||||
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 9999999999999999999999999999999999999999999999976 799999999999997678999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeeccCCC-----CC---CCccccchhhhhh------------------hhccccceeee
Q 027137 160 APLAKVIHDKFGIVEGLMTTVHSITGIR-----PK---KLWMGHHQRIGEV------------------AGLLHSTSFLA 213 (227)
Q Consensus 160 ap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~---~d~r~~r~a~~~~------------------~~~~~~~~~~~ 213 (227)
+|++|+|||+|||+++.||||||+|++| ++ +|||++|++++|| ||||++|+|++
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 246 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRV 246 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEe
Confidence 9999999999999999999999999999 44 8999999987655 89999999999
Q ss_pred ccCchhhhhhcccC
Q 027137 214 VLEPLRLLERSCLL 227 (227)
Q Consensus 214 ~~~~~~~~~~~~~~ 227 (227)
|+++++++|++|.|
T Consensus 247 Pv~~gs~~dltv~l 260 (345)
T 2b4r_O 247 PIGTVSVVDLVCRL 260 (345)
T ss_dssp SCSSCEEEEEEEEE
T ss_pred cccceEEEEEEEEE
Confidence 99999999999964
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.4e-72 Score=510.31 Aligned_cols=221 Identities=38% Similarity=0.609 Sum_probs=210.7
Q ss_pred cEEEEEccChHHHHHHHHHHcC---CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~---~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+||||||||||||.++|+++++ +++++|+|||+ .++++++|||||||+||+|+ ++++++ |+.|.++|+.|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~-~~~l~v~g~~i~v~~ 78 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVN-GSYMVVNGDKIRVDA 78 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEE-TTEEEETTEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEe-CCEEEECCEEEEEEE
Confidence 6999999999999999999988 78999999997 79999999999999999999 899996 557999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CCC-eEEeccCccccCCCCcEEEcCChhhHh
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNENEYKPELNIVSNASCTTNC 158 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~p-~~V~gVN~~~~~~~~~IVSnaSCtTn~ 158 (227)
++||+++||++.|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++.++|||||||||||
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 999999999999999999999999999999999999999999999997 789 999999999998767899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhh------------------hhhccccceeeecc
Q 027137 159 LAPLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGE------------------VAGLLHSTSFLAVL 215 (227)
Q Consensus 159 Lap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~------------------~~~~~~~~~~~~~~ 215 (227)
|+|++|+|||+|||+++.||||||+|++| +|+|||++|++++| +||||++|+|++|+
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv 238 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPT 238 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeec
Confidence 99999999999999999999999999999 57899999998766 49999999999999
Q ss_pred CchhhhhhcccC
Q 027137 216 EPLRLLERSCLL 227 (227)
Q Consensus 216 ~~~~~~~~~~~~ 227 (227)
++++++|++|.|
T Consensus 239 ~~~s~~dl~v~l 250 (335)
T 1obf_O 239 INVSIVDLSFVA 250 (335)
T ss_dssp SSCEEEEEEEEE
T ss_pred cceEEEEEEEEE
Confidence 999999999964
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=4.5e-73 Score=514.45 Aligned_cols=222 Identities=43% Similarity=0.762 Sum_probs=211.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
++||||||||||||.++|++++++++++|+|||. .++++++|||||||+||+|+ ++++++ ++.|.++|+.|++++++
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~-~~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAK-DDSIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEC-SSEEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEc-CCEEEECCEEEEEEEcC
Confidence 4799999999999999999999889999999995 79999999999999999999 899985 55799999999999999
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCC-eEEeccCccccCC-CCcEEEcCChhhHhHH
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p-~~V~gVN~~~~~~-~~~IVSnaSCtTn~La 160 (227)
+|++++|++.|+||||||||.|+++++++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999997 6789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeeccCc
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEP 217 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~ 217 (227)
|++|+|||+|||+++.||||||+|++| +|+||||+|++++|| ||||++|+|++|+++
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~ 238 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPD 238 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCCcchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecccc
Confidence 999999999999999999999999999 578999999987765 899999999999999
Q ss_pred hhhhhhcccC
Q 027137 218 LRLLERSCLL 227 (227)
Q Consensus 218 ~~~~~~~~~~ 227 (227)
++++|++|.|
T Consensus 239 ~s~~dltv~l 248 (342)
T 2ep7_A 239 GSLIDLTVVV 248 (342)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 9999999964
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.8e-66 Score=470.41 Aligned_cols=220 Identities=44% Similarity=0.691 Sum_probs=208.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||||||||||.++|+++++ ++++++|||+ .++++++|||+|||+||+|. ++++.+ ++.|.++|+.|+++++++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~-~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYD-DQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEC-SSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEc-CCEEEECCEEEEEEecCC
Confidence 4899999999999999999988 8999999996 79999999999999999999 999985 456999999999998899
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCC-CCcEEEcCChhhHhHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~-~~~IVSnaSCtTn~Lap 161 (227)
|++++|++.++|+||||||.|++++.++.|+++||||||||+|++| +|+||||||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 799999999999996 47899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeeccCch
Q 027137 162 LAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEPL 218 (227)
Q Consensus 162 ~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~~ 218 (227)
++||||++|||+++.||||||+|++| +|+||||+|++++|| ||||+.|++++|++++
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~g 236 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATG 236 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhccccccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCE
Confidence 99999999999999999999999999 678999999987765 8999999999999999
Q ss_pred hhhhhcccC
Q 027137 219 RLLERSCLL 227 (227)
Q Consensus 219 ~~~~~~~~~ 227 (227)
++++++|.|
T Consensus 237 s~~dl~v~l 245 (331)
T 2g82_O 237 SISDITALL 245 (331)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999999974
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=2.5e-66 Score=476.36 Aligned_cols=222 Identities=36% Similarity=0.655 Sum_probs=209.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||||||||||.++|+++++ +++++|+|||+ .++++++|||+|||+||+|. +++++++ +.|.++|+.|.+++
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~-~~l~v~g~~i~v~~ 78 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDE-NSITVNGKTMKIVC 78 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEET-TEEEETTEEEEEEC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeC-CeEEECCeEEEEEe
Confidence 48999999999999999999988 88999999997 69999999999999999999 9999854 46999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CC-eEEeccCccccCC-CCcEEEcCChhhH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTTN 157 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p-~~V~gVN~~~~~~-~~~IVSnaSCtTn 157 (227)
++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +| +||||||++.|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 9999999998889999999999999999999999999999999999987 68 9999999999997 4789999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhh------------------hhhccccceeeec
Q 027137 158 CLAPLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGE------------------VAGLLHSTSFLAV 214 (227)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~------------------~~~~~~~~~~~~~ 214 (227)
||+|++|+||++|||+++.|||||++|++| +|+||||+|++++| +||||+.|++++|
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVP 238 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccchhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEec
Confidence 999999999999999999999999999999 57899999998765 4999999999999
Q ss_pred cCchhhhhhcccC
Q 027137 215 LEPLRLLERSCLL 227 (227)
Q Consensus 215 ~~~~~~~~~~~~~ 227 (227)
++++++++++|.|
T Consensus 239 t~~gs~~dlt~~l 251 (380)
T 2d2i_A 239 TPNVSVVDLVVQV 251 (380)
T ss_dssp CSSCEEEEEEEEE
T ss_pred cCCEEEEEEEEEE
Confidence 9999999999975
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=7.2e-65 Score=461.33 Aligned_cols=222 Identities=36% Similarity=0.655 Sum_probs=209.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||||||||||.++|++.++ |++++|+|||+ .++++++|||+|||+||+|. +++++++ +.|.++|+.|.+++
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~-~~l~v~g~~i~v~~ 78 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDE-NSITVNGKTMKIVC 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEET-TEEEETTEEEEEEC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcC-CeeeecCceEEEEe
Confidence 48999999999999999999988 89999999997 69999999999999999999 8999854 46999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CC-eEEeccCccccCC-CCcEEEcCChhhH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTTN 157 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p-~~V~gVN~~~~~~-~~~IVSnaSCtTn 157 (227)
++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| .| +||||||++.|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 9999999999889999999999999999999999999999999999986 68 9999999999997 4789999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhh------------------hhhccccceeeec
Q 027137 158 CLAPLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGE------------------VAGLLHSTSFLAV 214 (227)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~------------------~~~~~~~~~~~~~ 214 (227)
||+|++|+||++|||+++.|||||++|++| +|+||||+|++++| ++|||+.|++++|
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP 238 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccchhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEec
Confidence 999999999999999999999999999999 57899999998765 5899999999999
Q ss_pred cCchhhhhhcccC
Q 027137 215 LEPLRLLERSCLL 227 (227)
Q Consensus 215 ~~~~~~~~~~~~~ 227 (227)
+++.++++++|.|
T Consensus 239 ~~~g~~~dl~v~l 251 (339)
T 3b1j_A 239 TPNVSVVDLVVQV 251 (339)
T ss_dssp CSSCEEEEEEEEE
T ss_pred cCCEEEEEEEEEE
Confidence 9999999999874
No 15
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=5.3e-65 Score=461.71 Aligned_cols=222 Identities=39% Similarity=0.664 Sum_probs=209.0
Q ss_pred cEEEEEccChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+||||||||||||.++|+++++ |++++++|||. .++++++|||+|||+||+|. +++++.+++.|.++|+.|.++++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTSEEEETTEEEEEECC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCCeEEECCeEEEEEec
Confidence 7999999999999999999988 89999999995 79999999999999999999 89983345569999999999999
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCCCCcEEEcCChhhHhHH
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~~~~IVSnaSCtTn~La 160 (227)
+||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++| +|+||||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~la 159 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLA 159 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHH
Confidence 999999999889999999999999999999999999999999999876 7999999999999866799999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhh------------------hhhccccceeeeccCc
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGE------------------VAGLLHSTSFLAVLEP 217 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~------------------~~~~~~~~~~~~~~~~ 217 (227)
|++|+||++|||+++.||||||+|++| +|+||||+|++++| +||||+.|++++|+++
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~~ 239 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 239 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccchhhcchhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCCC
Confidence 999999999999999999999999999 68999999998655 5999999999999999
Q ss_pred hhhhhhcccC
Q 027137 218 LRLLERSCLL 227 (227)
Q Consensus 218 ~~~~~~~~~~ 227 (227)
+++++++|.|
T Consensus 240 gs~~dl~~~l 249 (337)
T 1rm4_O 240 VSVVDLVVQV 249 (337)
T ss_dssp CEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9999999864
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=2.9e-64 Score=459.41 Aligned_cols=224 Identities=53% Similarity=0.921 Sum_probs=208.5
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+++||||||||||||.++|+++++|+++||+||||..++++++|||+|||+||+|. ++++++++ .|.+||+.|.++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEec
Confidence 45899999999999999999999999999999997689999999999999999999 89998544 69999999999999
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCCC-CcEEEcCChhhHhH
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPE-LNIVSNASCTTNCL 159 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~~-~~IVSnaSCtTn~L 159 (227)
+||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +|+||||||++.|++. .+||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 999999998889999999999999999999999999999999999976 7999999999999864 78999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeeccCCC-----CC---CCccccchhhhhh------------------hhccccceeee
Q 027137 160 APLAKVIHDKFGIVEGLMTTVHSITGIR-----PK---KLWMGHHQRIGEV------------------AGLLHSTSFLA 213 (227)
Q Consensus 160 ap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~---~d~r~~r~a~~~~------------------~~~~~~~~~~~ 213 (227)
+|++|||+++|||+++.||||||+|++| +| +|||++|++++|| ||||+.|++++
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rV 253 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRV 253 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEe
Confidence 9999999999999999999999999999 56 8999999986655 89999999999
Q ss_pred ccCchhhhhhcccC
Q 027137 214 VLEPLRLLERSCLL 227 (227)
Q Consensus 214 ~~~~~~~~~~~~~~ 227 (227)
|+++.++++++|.|
T Consensus 254 P~~~gs~~dl~~~l 267 (354)
T 3cps_A 254 PTPDVSVVDLTCKL 267 (354)
T ss_dssp SCSSCEEEEEEEEE
T ss_pred ccCCEEEEEEEEEE
Confidence 99999999999975
No 17
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=2.7e-63 Score=450.64 Aligned_cols=227 Identities=73% Similarity=1.168 Sum_probs=209.6
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
||++||||||||||||.++|++.++|++++++|||+..++++++|||||||+||+|..++++..+++.|.++|+.|.+++
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 67789999999999999999999999999999999767999999999999999998613565523446999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccccCCCCcEEEcCChhhHhHH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~~~~~~~IVSnaSCtTn~La 160 (227)
++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|.|++|||||++.|++..+||||||||||||+
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 99999999988899999999999999999999999999999999999989999999999999866789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CC-CCccccchhhhhh------------------hhccccceeeeccC
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PK-KLWMGHHQRIGEV------------------AGLLHSTSFLAVLE 216 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~-~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~ 216 (227)
|++|||+++|||+++.|||+||+|++| +| +|||++|++++|| |||++.|++++|++
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 240 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccC
Confidence 999999999999999999999999999 45 6999999998776 89999999999999
Q ss_pred chhhhhhcccC
Q 027137 217 PLRLLERSCLL 227 (227)
Q Consensus 217 ~~~~~~~~~~~ 227 (227)
+.++++++|.|
T Consensus 241 ~g~~~~l~~~l 251 (337)
T 3e5r_O 241 DVSVVDLTVRI 251 (337)
T ss_dssp SCEEEEEEEEE
T ss_pred CeEEEEEEEEE
Confidence 99999999875
No 18
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.7e-63 Score=451.46 Aligned_cols=221 Identities=46% Similarity=0.751 Sum_probs=208.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||||||||||.++|.++++|++++++|||. .++++++|||+|||+||+|. +++++++ +.|.++|+.|.++++++
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~-~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNG-NNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEET-TEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEcc-CcEEECCEEEEEEecCC
Confidence 799999999999999999999999999999996 69999999999999999999 8999864 46999999999998899
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCC-CCcEEEcCChhhHhHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~-~~~IVSnaSCtTn~Lap 161 (227)
|++++|++.++|+||||||.|++++.++.|+++|+||||||+|++| .|++|||||++.|++ ..+||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 799999999999986 37899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeeccCch
Q 027137 162 LAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEPL 218 (227)
Q Consensus 162 ~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~~ 218 (227)
++|||+++|||+++.||||||+|++| +|+|||++|++++|| ||||+.|++++|+++.
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~g 238 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhhhccccccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCE
Confidence 99999999999999999999999999 578999999987665 8999999999999999
Q ss_pred hhhhhcccC
Q 027137 219 RLLERSCLL 227 (227)
Q Consensus 219 ~~~~~~~~~ 227 (227)
++++++|.|
T Consensus 239 s~~~l~~~l 247 (334)
T 3cmc_O 239 SVVDLVAEL 247 (334)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999999864
No 19
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=1.3e-62 Score=445.87 Aligned_cols=225 Identities=56% Similarity=0.996 Sum_probs=210.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
||++||||||||||||.++|++.+++++++++|||+..++++++||++|||+||+|. +++++++ +.|.++|+.|++++
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~-~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAEN-GKLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEET-TEEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcC-CeEEECCeEEEEEe
Confidence 777899999999999999999998889999999996569999999999999999999 8998854 46999999999999
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccccCCCCcEEEcCChhhHhHH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~~~~~~~IVSnaSCtTn~La 160 (227)
++||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++|.|++|||||++.|++..+||||||||||||+
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 99999999998899999999999999999999999999999999998889999999999999866789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CC-CCccccchhhhh------------------hhhccccceeeeccC
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PK-KLWMGHHQRIGE------------------VAGLLHSTSFLAVLE 216 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~-~d~r~~r~a~~~------------------~~~~~~~~~~~~~~~ 216 (227)
|++|||+++|||+++.|||+|++|++| +| +|||++|++++| ++||++.|++++|++
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 238 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 238 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccC
Confidence 999999999999999999999999999 45 799999998766 489999999999999
Q ss_pred chhhhhhcccC
Q 027137 217 PLRLLERSCLL 227 (227)
Q Consensus 217 ~~~~~~~~~~~ 227 (227)
+.++++++|.|
T Consensus 239 ~g~~~~l~~~l 249 (335)
T 1u8f_O 239 NVSVVDLTCRL 249 (335)
T ss_dssp SCEEEEEEEEE
T ss_pred CEEEEEEEEEE
Confidence 99999999864
No 20
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.3e-62 Score=445.43 Aligned_cols=221 Identities=42% Similarity=0.734 Sum_probs=209.0
Q ss_pred cEEEEEccChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+||||||||||||.++|.++++ |+++|++|||. .++++++|||+|||+||+|. ++++++ ++.|.++|+.+.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~-~~~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYT-ENSLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEEC-SSEEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEc-CCEEEECCeEEEEEec
Confidence 4899999999999999999988 89999999996 69999999999999999999 899985 5579999999999988
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCC-eEEeccCccccCCCCcEEEcCChhhHhHH
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p-~~V~gVN~~~~~~~~~IVSnaSCtTn~La 160 (227)
++|++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|.| ++|||||++.|++..+||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 99999999988999999999999999999999999999999999998899 99999999999866789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeeccCc
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAVLEP 217 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~ 217 (227)
|++|||+++|||+++.||||||+|++| +|+|||++|++++|| |||++.|++++|+++
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~ 237 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPD 237 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEccccC
Confidence 999999999999999999999999999 578999999987765 889999999999999
Q ss_pred hhhhhhcccC
Q 027137 218 LRLLERSCLL 227 (227)
Q Consensus 218 ~~~~~~~~~~ 227 (227)
.++++++|.|
T Consensus 238 g~l~~l~~~l 247 (332)
T 1hdg_O 238 GSITDLTVLV 247 (332)
T ss_dssp CEEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 9999999864
No 21
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=2.5e-62 Score=444.61 Aligned_cols=222 Identities=32% Similarity=0.595 Sum_probs=203.8
Q ss_pred ccEEEEEccChHHHHHHHHHHc---CCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~---~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
++||||||||+|||.++|++.+ +|++++++|||. .++++++|||+|||+||+|. ++++++ ++.|.++|+.|+++
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~-~~~l~v~g~~i~v~ 78 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQE-RDQLFVGDDAIRVL 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEETTEEEEEE
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEc-CCeeEECCEEEEEE
Confidence 4899999999999999999998 889999999997 69999999999999999999 899985 45699999999999
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC-CCCC-eEEeccCccccCCCCcEEEcCChhhH
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNENEYKPELNIVSNASCTTN 157 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps-~d~p-~~V~gVN~~~~~~~~~IVSnaSCtTn 157 (227)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|+ .|.| ++|||||++.|++..+||||||||||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 889999999988899999999999999999999999999999999998 6788 99999999999875689999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeeccCCC-----CCCCccccchhhhhh------------------hhccccceeeec
Q 027137 158 CLAPLAKVIHDKFGIVEGLMTTVHSITGIR-----PKKLWMGHHQRIGEV------------------AGLLHSTSFLAV 214 (227)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-----~~~d~r~~r~a~~~~------------------~~~~~~~~~~~~ 214 (227)
||+|++|||+++|||+++.|||+||+|++| +|+|||++|++++|| ||||+.|++++|
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP 238 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVP 238 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC-----------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEECS
T ss_pred HHHHHHHHHHHccCcceeeEEEEEeccccccccccccccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEec
Confidence 999999999999999999999999999999 578999999987665 899999999999
Q ss_pred cCchhhhhhcccC
Q 027137 215 LEPLRLLERSCLL 227 (227)
Q Consensus 215 ~~~~~~~~~~~~~ 227 (227)
+++.++++.+|.|
T Consensus 239 ~~~g~~~~l~v~l 251 (339)
T 2x5j_O 239 TINVTAIDLSVTV 251 (339)
T ss_dssp SCSCEEEEEEEEE
T ss_pred ccCcEEEEEEEEE
Confidence 9999999999864
No 22
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.3e-61 Score=438.66 Aligned_cols=220 Identities=48% Similarity=0.839 Sum_probs=207.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||||||||||.++|+++++|+++|++|||. .++++++||++|||+||+|. +++++++ +.|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~~-~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVKD-GHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEET-TEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEcC-CEEEECCEEEEEEEcCC
Confidence 799999999999999999999999999999996 69999999999999999999 8998854 46999999999999999
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeccCccccCCCCcEEEcCChhhHhHHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLAPL 162 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d-~p~~V~gVN~~~~~~~~~IVSnaSCtTn~Lap~ 162 (227)
|+++||++.++|+||||||.|.+++.++.|+++|+|+|++|+|.++ .|++|||||++.|+ ..+||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999998889999999999999999999999999999999999864 79999999999998 678999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeeccCCC-----CC-CCccccchhhhhh------------------hhccccceeeeccCch
Q 027137 163 AKVIHDKFGIVEGLMTTVHSITGIR-----PK-KLWMGHHQRIGEV------------------AGLLHSTSFLAVLEPL 218 (227)
Q Consensus 163 lk~L~~~fgI~~~~~TTvha~t~~q-----~~-~d~r~~r~a~~~~------------------~~~~~~~~~~~~~~~~ 218 (227)
+||||++|||+++.|||+||+|++| +| +|||++|++++|| +||++.|++++|+++.
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g 237 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSC
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccE
Confidence 9999999999999999999999999 45 7999999986665 8999999999999999
Q ss_pred hhhhhcccC
Q 027137 219 RLLERSCLL 227 (227)
Q Consensus 219 ~~~~~~~~~ 227 (227)
++++++|.|
T Consensus 238 ~~~~l~~~l 246 (330)
T 1gad_O 238 SVVDLTVRL 246 (330)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999999864
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.1e-49 Score=357.24 Aligned_cols=203 Identities=18% Similarity=0.188 Sum_probs=174.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhccc--ccccCC--CCcce-EEeCCCeEEECCEE
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKP 75 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyD--S~~Gkf--~~~~v-~~~~~~~l~i~gk~ 75 (227)
|| +||||||||+|||.++|++.+++++++++|||. ++++++||++|| |+||+| . +++ +++++ .+.+++
T Consensus 1 Mm-ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~-- 73 (343)
T 2yyy_A 1 MP-AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG-- 73 (343)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC--
T ss_pred Cc-eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC--
Confidence 54 899999999999999999998889999999996 599999999999 999998 4 455 44333 366665
Q ss_pred EEEEeecCCCCCCCccCCccEEEeecCcccCHHhHH-HHHhCCCCEEEEeCCCC-C-CC-eEEeccCccccCCCCcEEEc
Q 027137 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNENEYKPELNIVSN 151 (227)
Q Consensus 76 I~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~-~hl~~GakkVIisaps~-d-~p-~~V~gVN~~~~~~~~~IVSn 151 (227)
+++++.| ++|+||||||.+.+++.++ .|+++| ++||+|+|++ | +| |||||||++.|++ .+||||
T Consensus 74 -------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn 141 (343)
T 2yyy_A 74 -------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRV 141 (343)
T ss_dssp -------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEE
T ss_pred -------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEec
Confidence 3445556 7999999999999999996 999999 5699999986 5 78 9999999999985 789999
Q ss_pred CChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCCCCCCccccchhh----------------------hhhhhccccc
Q 027137 152 ASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIRPKKLWMGHHQRI----------------------GEVAGLLHST 209 (227)
Q Consensus 152 aSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q~~~d~r~~r~a~----------------------~~~~~~~~~~ 209 (227)
||||||||+|++|+||++|||+++.|||||++|+.. |++|+++ .+++||+++|
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~~-----~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gkl~~~ 216 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAADPN-----DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGKILTS 216 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCTT-----CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTSEEEE
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCcC-----cchhhHHhcccCCCCCCCCcchHHHHHhhhccccceeeE
Confidence 999999999999999999999999999999999952 3344332 3688999999
Q ss_pred eeeeccCchhhhhhcccC
Q 027137 210 SFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~ 227 (227)
++++|+++.++++++|.|
T Consensus 217 avRVPv~~gh~~~l~v~l 234 (343)
T 2yyy_A 217 AVIVPTTLMHMHTLMVEV 234 (343)
T ss_dssp EEEESCSSCEEEEEEEEE
T ss_pred EEEecccceEEEEEEEEE
Confidence 999999999999998864
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=6.7e-36 Score=270.09 Aligned_cols=192 Identities=21% Similarity=0.252 Sum_probs=155.8
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
+||||+| ||++|+.++|.|.++. ++++.++ ++...+ . .|+.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~-~~~~~l~-----------~~~s~~----~--------~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN-FPLSELR-----------LYASPR----S--------AGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CCCSCCE-----------EEECGG----G--------SSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEE-----------Eeeccc----c--------CCCEEEEcCceEEEEeC-
Confidence 4899999 9999999999998552 3322221 111111 0 24468899999998765
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCCCCcEEEcCChhhH
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNASCTTN 157 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~~~~IVSnaSCtTn 157 (227)
+|+ +| ++|+||+|+|.|.+++.++.|+++|+ ++|+.|++ |.|++|||||++.|++..++||||||+||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 565 58 89999999999999999999999999 46777764 57999999999999864679999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeeccCC------------C------CCCCccccchhhhhhh----------------
Q 027137 158 CLAPLAKVIHDKFGIVEGLMTTVHSITGI------------R------PKKLWMGHHQRIGEVA---------------- 203 (227)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~TTvha~t~~------------q------~~~d~r~~r~a~~~~~---------------- 203 (227)
|++|+++||+++|||+++.|||+|++|++ | .+++||++|.++.||.
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999999 5 2479999988666554
Q ss_pred ------h--------ccccceeeeccCchhhhhhcccC
Q 027137 204 ------G--------LLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 204 ------~--------~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
+ +++.|.+++|+++.++++.+|.|
T Consensus 209 ~i~~e~~kil~~~~l~v~~~~~rVP~~~g~~~~~~~~l 246 (331)
T 2yv3_A 209 KVVWETHKIFGDDTIRISATAVRVPTLRAHAEAVSVEF 246 (331)
T ss_dssp HHHHHHHHHTTCTTCEEEEECCBCSCSSEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCceEEEEEEEeccCceEEEEEEEEE
Confidence 1 36788999999999998888753
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.6e-35 Score=267.95 Aligned_cols=194 Identities=23% Similarity=0.193 Sum_probs=152.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEE
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~ 77 (227)
|+++||||+| +|+||+.++|.|.++ |+++++++++.. + .|+.+.++|+.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-------------~-------------~G~~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-------------S-------------EGKTYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T-------------TTCEEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-------------C-------------CCCceeecCceeE
Confidence 3458999999 999999999999988 789999999751 1 0223557777777
Q ss_pred EEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCCC--CcEEE
Q 027137 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--LNIVS 150 (227)
Q Consensus 78 v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~~--~~IVS 150 (227)
+ .+.+++ +|. ++|+||+|+|.+.+++.++.|+++|++ +|+.+++ +.|++|||||++.|++. .+|||
T Consensus 55 ~-~~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~--vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIa 127 (336)
T 2r00_A 55 V-QNVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVV--VIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIA 127 (336)
T ss_dssp E-EEGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEE
T ss_pred E-ecCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCE--EEEcCCccccCCCCCeEeccCCHHHhccccCCcEEE
Confidence 7 344554 685 899999999999999999999999994 5666653 57999999999999852 67999
Q ss_pred cCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC------CCC------------Cccccchhh-------------
Q 027137 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR------PKK------------LWMGHHQRI------------- 199 (227)
Q Consensus 151 naSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q------~~~------------d~r~~r~a~------------- 199 (227)
||||+|||++|+++||+++|||+++.|||+|++|++| .++ ++|++|+++
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~ 207 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDN 207 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCS
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccC
Confidence 9999999999999999999999999999999999998 222 577766522
Q ss_pred ----------hhh-------hhccccceeeeccCchhhhhhcccC
Q 027137 200 ----------GEV-------AGLLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 200 ----------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
+++ +++++.|.+++|+++..+++.+|.|
T Consensus 208 gh~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l 252 (336)
T 2r00_A 208 GYTKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVET 252 (336)
T ss_dssp SCBHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEE
T ss_pred CccHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEe
Confidence 222 4688999999999999999888754
No 26
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.8e-37 Score=278.83 Aligned_cols=203 Identities=19% Similarity=0.198 Sum_probs=162.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhccc--ccccCCCCcce-EEeCCCeEEECCEEEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyD--S~~Gkf~~~~v-~~~~~~~l~i~gk~I~v~~ 80 (227)
+||||+|+|+||+.++|.+.+++++++++|+|. ++++.+++++|| ++||+|. +.+ .+++. .+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcCC------
Confidence 799999999999999999999889999999997 678888999988 8999987 554 33222 2545431
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CC--CeEEeccCccccCCCCcEEEcCChhhH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNENEYKPELNIVSNASCTTN 157 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~--p~~V~gVN~~~~~~~~~IVSnaSCtTn 157 (227)
++++.| ++|+||+|||.+.+++.++.|+++|++ ||+++|.+ |. |+||||+|++.+++ .+|||||||+||
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 222223 799999999999999999999999965 88888765 33 99999999999985 689999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeeccCCC-C----------C--CCccccchhhhhhh----hccccceeeeccCchhh
Q 027137 158 CLAPLAKVIHDKFGIVEGLMTTVHSITGIR-P----------K--KLWMGHHQRIGEVA----GLLHSTSFLAVLEPLRL 220 (227)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-~----------~--~d~r~~r~a~~~~~----~~~~~~~~~~~~~~~~~ 220 (227)
||+|+|+||+++|||+++.|||+|++|+.+ . . +.. .+ .+.++. =+++.|.+++|+++..+
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~p~~~~~~~~~NiiP~~i~~~--~~-~~~ei~kil~l~v~~t~~rVPv~~g~~ 220 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGADPAQVSKGPINAIIPNPPKLP--SH-HGPDVKTVLDINIDTMAVIVPTTLMHQ 220 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSCTTCTTCCCSSCCEESSSSSS--CT-HHHHHHTTSCCCEEEEEEEESCCSCEE
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeecCCccccchhcCEEeccCCCC--Cc-chHHHHhhheeEEEEEEEEcCccCeEE
Confidence 999999999999999999999999998754 0 1 001 11 112221 13899999999999999
Q ss_pred hhhcccC
Q 027137 221 LERSCLL 227 (227)
Q Consensus 221 ~~~~~~~ 227 (227)
.+.+|.|
T Consensus 221 ~~~~v~l 227 (337)
T 1cf2_P 221 HNVMVEV 227 (337)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9888754
No 27
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.5e-35 Score=268.62 Aligned_cols=195 Identities=14% Similarity=0.111 Sum_probs=158.2
Q ss_pred CccEEEEEc-cChHHHHHHHHHH--cCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 2 GKVKIGING-FGRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~--~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
|++||+|+| +|+||+.++|.|. ..+.++++++++.. + . |+.+.++|+.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-------------~-~------------g~~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-------------S-A------------GQRMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-------------T-T------------TCEEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-------------C-C------------CCccccCCcceEE
Confidence 458999999 9999999999998 45789999998741 1 1 2234466766666
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC--CCCeEEeccCccccCCCC--cEEEcCCh
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNENEYKPEL--NIVSNASC 154 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~--d~p~~V~gVN~~~~~~~~--~IVSnaSC 154 (227)
. +.+++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++.. +.|++|||||++.+++.. +|||||||
T Consensus 59 ~-~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C 133 (340)
T 2hjs_A 59 G-DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCA 133 (340)
T ss_dssp E-EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCH
T ss_pred e-cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCH
Confidence 4 345554 75 899999999999999999999999998655677653 368999999999998532 79999999
Q ss_pred hhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC------CC---CCcccc---------chhh-----------------
Q 027137 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR------PK---KLWMGH---------HQRI----------------- 199 (227)
Q Consensus 155 tTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q------~~---~d~r~~---------r~a~----------------- 199 (227)
+|||++|+++||+++|||+++.|||+|++|++| .+ +|||++ |+++
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 213 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSA 213 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBH
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccH
Confidence 999999999999999999999999999999999 12 677774 3221
Q ss_pred ------hh-------hhhccccceeeeccCchhhhhhcccC
Q 027137 200 ------GE-------VAGLLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 200 ------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
++ .+++++.|.+++|+++.++++.+|.|
T Consensus 214 Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l 254 (340)
T 2hjs_A 214 IERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQC 254 (340)
T ss_dssp HHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEE
Confidence 11 34689999999999999999988754
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=9.4e-36 Score=270.02 Aligned_cols=192 Identities=18% Similarity=0.247 Sum_probs=150.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||+|+|+|||.++|.+.+++++++++|+|. ++++.+++++++- ++ ++.+++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g----~~--------------------~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG----IR--------------------IYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT----CC--------------------EECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC----cc--------------------eecCcC
Confidence 799999999999999999999999999999996 5777778876532 00 111112
Q ss_pred CCCCCCc-----------c--CCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC--CCeEEeccCccccCCCCcE
Q 027137 84 PEEIPWA-----------E--TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPELNI 148 (227)
Q Consensus 84 p~~i~W~-----------~--~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d--~p~~V~gVN~~~~~~~~~I 148 (227)
|+++ |+ + .++|+||+|||.+.+++.++.|+++|+|++.+|++..+ +++||+|+|++.+.+ .++
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~i 133 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKY 133 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSE
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCC
Confidence 2222 22 1 26899999999999999999999999987777777544 479999999776543 459
Q ss_pred EEcCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCCCCCCccc-------------cch------hhhhhhhccccc
Q 027137 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIRPKKLWMG-------------HHQ------RIGEVAGLLHST 209 (227)
Q Consensus 149 VSnaSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q~~~d~r~-------------~r~------a~~~~~~~~~~~ 209 (227)
|||||||||||+|++|+|+++|||+++.|||+|+++. +++++|. +.+ ...++ ++++|
T Consensus 134 IsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~--~~~~~~~~~~niip~~~~i~t~~a~ev~~vlp~l--~l~~~ 209 (340)
T 1b7g_O 134 IRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD--QKEVKKGPINSLVPDPATVPSHHAKDVNSVIRNL--DIATM 209 (340)
T ss_dssp EEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC--TTCCSCCCSSCCEESSSSSSCTHHHHHHTTSTTC--EEEEE
T ss_pred cccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC--cccchHHHHcCCCCCCcCCCCCchhHHHHhCCCC--cEEEE
Confidence 9999999999999999999999999999999999975 2334321 110 11233 38899
Q ss_pred eeeeccCchhhhhhcccC
Q 027137 210 SFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~ 227 (227)
++++|+++.++.+.+|.|
T Consensus 210 a~rVPv~~gh~~~l~v~l 227 (340)
T 1b7g_O 210 AVIAPTTLMHMHFINITL 227 (340)
T ss_dssp EEEESCSSCEEEEEEEEE
T ss_pred EEEeccCCeEEEEEEEEE
Confidence 999999999999999864
No 29
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.4e-36 Score=271.04 Aligned_cols=201 Identities=20% Similarity=0.245 Sum_probs=163.9
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhccc--ccccCCCCcce-EEeCCCeEEECCEEEEE
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyD--S~~Gkf~~~~v-~~~~~~~l~i~gk~I~v 78 (227)
|++||||+|+|+||+.++|++.+.+++++++|+|. +++++.++++|| ++||+|. +.+ .++++ .+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC-----
Confidence 24899999999999999999999999999999997 688889999988 8999987 554 11111 122222
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-C-C-CeEEeccCccccCCCCcEEEcCChh
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNENEYKPELNIVSNASCT 155 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d-~-p~~V~gVN~~~~~~~~~IVSnaSCt 155 (227)
+++++.| ++|+|++|||.+.+.+.+..|+++| |+||+++|.+ | . |++|+|+|++.|+. .++|+||||+
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~ 142 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCN 142 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHH
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcH
Confidence 3444444 7999999999999999999999999 5699999875 4 4 59999999998874 6899999999
Q ss_pred hHhHHHHHHHHhhhcCeeEEEEEEEeeccCCCCCCCccccchhhhhhh--------------h----ccccceeeeccCc
Q 027137 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITGIRPKKLWMGHHQRIGEVA--------------G----LLHSTSFLAVLEP 217 (227)
Q Consensus 156 Tn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q~~~d~r~~r~a~~~~~--------------~----~~~~~~~~~~~~~ 217 (227)
||||+|++|+|++. |+++.|+|+|++|+.| |++|+++.||- - +++++++++|+++
T Consensus 143 t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~-----~~~r~~~~niiP~i~~~~g~~~~i~~~l~l~l~~~~~rVPv~~ 215 (334)
T 2czc_A 143 TTGLVRTLSAIREY--ADYVYAVMIRRAADPN-----DTKRGPINAIKPTVEVPSHHGPDVQTVIPINIETMAFVVPTTL 215 (334)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEEEEEESSCTT-----CCSCCCSSCCEECCSSSCTHHHHHTTTSCCCEEEEEEEESCSS
T ss_pred HHHHHHHHHHHHHH--hccccEEEEEEecCcc-----ccccChhhcEEeccCCCCchhhhhheEEEEEEEEEEEEcCCCc
Confidence 99999999999997 9999999999999975 45555543220 0 2889999999999
Q ss_pred hhhhhhcccC
Q 027137 218 LRLLERSCLL 227 (227)
Q Consensus 218 ~~~~~~~~~~ 227 (227)
+++++.+|.+
T Consensus 216 ~~~~~~~~~~ 225 (334)
T 2czc_A 216 MHVHSVMVEL 225 (334)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 9999988753
No 30
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.97 E-value=5.4e-33 Score=252.51 Aligned_cols=206 Identities=16% Similarity=0.159 Sum_probs=157.7
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+++||||+| +|++|+.++|.|.++|+++++++++...+. --+|+++|+.+. ++ .+.++++.+.+ .
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-----g~~~~~~~~~~~-------~~-~~~~~~~~~~~-~ 68 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-----GKKYKDAVKWIE-------QG-DIPEEVQDLPI-V 68 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-----TSBHHHHCCCCS-------SS-SCCHHHHTCBE-E
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-----CCCHHHhcCccc-------cc-ccccCCceeEE-e
Confidence 468999999 999999999999999999999998431011 123688887653 11 13333444444 3
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCC----------C
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP----------E 145 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~----------~ 145 (227)
+.+++. |. ++|+||+|+|.+.+++.++.|+++|+| ||++|++ |.|++|||+|++.|+. .
T Consensus 69 ~~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 142 (350)
T 2ep5_A 69 STNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWK 142 (350)
T ss_dssp CSSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCS
T ss_pred eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccC
Confidence 334544 53 899999999999999999999999985 7888875 5799999999998873 2
Q ss_pred CcEEEcCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC-CCCCccc----------c--chhhhh-------hhh-
Q 027137 146 LNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR-PKKLWMG----------H--HQRIGE-------VAG- 204 (227)
Q Consensus 146 ~~IVSnaSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-~~~d~r~----------~--r~a~~~-------~~~- 204 (227)
.++||||||+|||++|+++||+++|||+++.|||+|++|++| .+..+|. + +-...| ++|
T Consensus 143 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~~~~~~~~~~ni~py~~~~e~k~~~E~~~~l~~~~g~ 222 (350)
T 2ep5_A 143 GILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYNGISFMAIEGNIIPYIKGEEDKIAKELTKLNGKLENN 222 (350)
T ss_dssp SEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSSSSBHHHHTTCCBCCCTTHHHHHHHHHHHHTCEECSS
T ss_pred ceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCCCCCChHHhCCEEeccCCcchHHHHHHHHHHhhcccc
Confidence 369999999999999999999999999999999999999999 2112211 0 112222 233
Q ss_pred -------ccccceeeeccCchhhhhhcccC
Q 027137 205 -------LLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 205 -------~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
+++.|.+++|++...+.+.+|.|
T Consensus 223 ~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l 252 (350)
T 2ep5_A 223 QIIPANLDSTVTSIRVPTRVGHMGVINIVT 252 (350)
T ss_dssp SEECCCCEEEEEEEECSCSSCEEEEEEEEC
T ss_pred ccccccccEEEEeEEecccceEEEEEEEEE
Confidence 78999999999999998888764
No 31
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.97 E-value=6.5e-34 Score=260.48 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=128.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
+||||+| +|++|+.++|.+++..++++++| |+++++| +|+-- . .++|+.+.+....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i-----------~~~~~~s-~G~~v----~-------~~~g~~i~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP-----------VFFSTSQ-LGQAA----P-------SFGGTTGTLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE-----------EEEESSS-TTSBC----C-------GGGTCCCBCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE-----------EEEEeCC-CCCCc----c-------ccCCCceEEEecC
Confidence 6999999 99999999995544444554333 6677786 77521 1 1345556665544
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCCC---C-cEEEcCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE---L-NIVSNAS 153 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~~---~-~IVSnaS 153 (227)
+|++ |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |.|++|||||++.|++. . ++|+|||
T Consensus 59 ~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~ 134 (367)
T 1t4b_A 59 DLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGN 134 (367)
T ss_dssp CHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCC
Confidence 4544 75 899999999999999999999999998899999985 57999999999998752 1 6999999
Q ss_pred hhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 154 CtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
|+|+|++|+++||+++++|+++.|||+|++|++|
T Consensus 135 Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG 168 (367)
T 1t4b_A 135 CTVSLMLMSLGGLFANDLVDWVSVATYQAASGGG 168 (367)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEEecccccc
Confidence 9999999999999999999999999999999996
No 32
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.97 E-value=7.7e-32 Score=245.91 Aligned_cols=198 Identities=12% Similarity=0.122 Sum_probs=155.3
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+| +|+||+.++|.|.++++++++++++.. +.. .+||++|++|. +.+ . .+ +. +
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~g-----~~~~~~~~~~~-~~v-~--~d-l~-------~- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KAG-----QSMESVFPHLR-AQK-L--PT-LV-------S- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TTT-----SCHHHHCGGGT-TSC-C--CC-CB-------C-
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hcC-----CCHHHhCchhc-Ccc-c--cc-ce-------e-
Confidence 3458999999 999999999999999999999999862 222 56899999887 332 1 11 21 1
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCC---C------------------CeEEecc-
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD---A------------------PMFVVGV- 137 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d---~------------------p~~V~gV- 137 (227)
. + ++ .|. ++|+||+|+|.+.+++.++.| ++|+ +||+.+++. . |.+|||+
T Consensus 75 ~--~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvp 145 (359)
T 1xyg_A 75 V--K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLT 145 (359)
T ss_dssp G--G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCH
T ss_pred c--c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECC
Confidence 1 1 22 575 899999999999999999999 9998 477777642 2 4677777
Q ss_pred --CccccCCCCcEEEcCChhhHhHHHHHHHHhhhcCee--EEEEEEEeeccCCC-C-----CCCcccc---------chh
Q 027137 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIR-P-----KKLWMGH---------HQR 198 (227)
Q Consensus 138 --N~~~~~~~~~IVSnaSCtTn~Lap~lk~L~~~fgI~--~~~~TTvha~t~~q-~-----~~d~r~~---------r~a 198 (227)
|++.++. .++||||||+|||++|+|+||+++|+|+ ++.|||+|++|++| . |++++.. +-.
T Consensus 146 E~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~~~~ni~py~~~~h~h 224 (359)
T 1xyg_A 146 EILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSEIAEGISSYGVTRHRH 224 (359)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGBHHHHTTCCEECSCSCCTH
T ss_pred ccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhhhHHHhcCeeccccccccc
Confidence 9999875 6899999999999999999999999999 99999999999999 1 2222210 112
Q ss_pred hhhhh---h-------ccccceeeeccCchhhhhhcccC
Q 027137 199 IGEVA---G-------LLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 199 ~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
..||. | +++.|..++|+++..+.+.++.|
T Consensus 225 ~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l 263 (359)
T 1xyg_A 225 VPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEM 263 (359)
T ss_dssp HHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEB
T ss_pred HHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEe
Confidence 44565 6 78999999999999988887754
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=1.6e-31 Score=242.98 Aligned_cols=207 Identities=19% Similarity=0.220 Sum_probs=156.3
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC-CCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd-~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|++||||+| +|+||+.++|.|.++++++++++++ +....+ ++++.|+.+. . . .+..+++.+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~------~~~~~~~~~~-~------~-~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGK------KYKDACYWFQ-D------R-DIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTS------BHHHHSCCCC-S------S-CCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccc------cHHHhccccc-c------c-ccccCceeeEE-
Confidence 458999999 9999999999999888999999984 311111 2477777553 1 0 01112223333
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCC----------
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP---------- 144 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~---------- 144 (227)
.+.++++ |.+.++|+||+|+|.+.+++.++.|+++|++ |||+|++ +.|+++||+|++.|+.
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 2345554 7545899999999999999999999999984 8999874 4799999999998873
Q ss_pred CCcEEEcCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC-CCCCccc------------cchhhhhhhh-------
Q 027137 145 ELNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR-PKKLWMG------------HHQRIGEVAG------- 204 (227)
Q Consensus 145 ~~~IVSnaSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q-~~~d~r~------------~r~a~~~~~~------- 204 (227)
..++||||+|+|||++|.++||+++|||+++.|+|+|++|++| ....+|. .+-...|+.+
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~~~~~~~~~~ni~py~~~~~~k~~~Ei~~~l~~~~g 227 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNGVPSMAILDNLIPFIKNEEEKMQTESLKLLGTLKD 227 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTTTSCHHHHTTCCBSCCTTHHHHHHHHHHHHTSEEET
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcccccchHHhCCEEeccCchhhHHHHHHHHHHhcccc
Confidence 2359999999999999999999999999999999999999999 2112221 0112344433
Q ss_pred --------ccccceeeeccCchhhhhhcccC
Q 027137 205 --------LLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 205 --------~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
+++.|..++|+....+.+.++.|
T Consensus 228 ~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l 258 (354)
T 1ys4_A 228 GKVELANFKISASCNRVAVIDGHTESIFVKT 258 (354)
T ss_dssp TEEECCCCEEEEECCBCSCSSCEEEEEEEEC
T ss_pred ccccCCCceEEEEEEEecccceEEEEEEEEE
Confidence 67889999999999888877754
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.97 E-value=7.9e-31 Score=238.01 Aligned_cols=197 Identities=16% Similarity=0.094 Sum_probs=153.4
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 1 m~-~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
|| ++||||+| +|+||+.++|.|.++++++++++++.. +.. .+|++.|++|. +. . .+.+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~-~~g-----~~~~~~~~~~~-g~------~-------~~~~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR-FAG-----EPVHFVHPNLR-GR------T-------NLKF 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST-TTT-----SBGGGTCGGGT-TT------C-------CCBC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch-hhC-----chhHHhCchhc-Cc------c-------cccc
Confidence 54 68999999 999999999999999999999999852 221 46788888876 21 1 1122
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC---CC-----------------CeEEecc-
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---DA-----------------PMFVVGV- 137 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~---d~-----------------p~~V~gV- 137 (227)
.+++ +|. ++|+||+|+|.+.+++.++.|+++|++ ||+.+++ +. |.+|+|+
T Consensus 61 ---~~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvp 131 (345)
T 2ozp_A 61 ---VPPE--KLE--PADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVP 131 (345)
T ss_dssp ---BCGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCH
T ss_pred ---cchh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEecc
Confidence 1222 373 899999999999999999999999984 5666653 11 3566666
Q ss_pred --CccccCCCCcEEEcCChhhHhHHHHHHHHhhhcCee--EEEEEEEeeccCCC-C-----CCCcccc---------chh
Q 027137 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIR-P-----KKLWMGH---------HQR 198 (227)
Q Consensus 138 --N~~~~~~~~~IVSnaSCtTn~Lap~lk~L~~~fgI~--~~~~TTvha~t~~q-~-----~~d~r~~---------r~a 198 (227)
|++.++. .++||||||+|||++|.++||+++|+|+ ++.|||+|++|++| . |++++.. +--
T Consensus 132 E~n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~~~~n~~py~~~~h~~ 210 (345)
T 2ozp_A 132 ELYREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPERAGSIRVYKPTGHRH 210 (345)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGCHHHHTTCCEEEECSCCTH
T ss_pred ccCHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccccchhhccccccCCCCCccC
Confidence 9999875 6899999999999999999999999999 99999999999999 2 2222211 224
Q ss_pred hhhhh-----h-ccccceeeeccCchhhhhhcccC
Q 027137 199 IGEVA-----G-LLHSTSFLAVLEPLRLLERSCLL 227 (227)
Q Consensus 199 ~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
..+|. + +++.|..++|+....+.+.++.|
T Consensus 211 ~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l 245 (345)
T 2ozp_A 211 TAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFV 245 (345)
T ss_dssp HHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEB
T ss_pred hHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEe
Confidence 55776 6 89999999999999988877753
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.94 E-value=9.5e-27 Score=212.98 Aligned_cols=152 Identities=18% Similarity=0.330 Sum_probs=126.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 3 KVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
++||||+| +|.+|+.++|.|.++ |.++++.+... .| .|+.+.+.|+.+.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------~s-------------aG~~~~~~~~~~~~- 54 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------RS-------------AGKSLKFKDQDITI- 54 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------TT-------------TTCEEEETTEEEEE-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------cc-------------CCCcceecCCCceE-
Confidence 58999999 999999999988887 55676666432 11 24456667776666
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCCCCcEEEcCCh
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNASC 154 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~~~~IVSnaSC 154 (227)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|++ ||+.+++ |+|++|||||.+.++...++||||+|
T Consensus 55 ~~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~--vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC 128 (366)
T 3pwk_A 55 EETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVV--VVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNC 128 (366)
T ss_dssp EECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCH
T ss_pred eeCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCE--EEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCc
Confidence 3334444 43 899999999999999999999999994 6766652 47999999999999765789999999
Q ss_pred hhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 155 tTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
+|||++|+++||+++|||+++.|||+|++|+.+
T Consensus 129 ~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG 161 (366)
T 3pwk_A 129 STIQMMVALEPVRQKWGLDRIIVSTYQAVSGAG 161 (366)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEEEeccccC
Confidence 999999999999999999999999999999998
No 36
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.94 E-value=2.2e-26 Score=208.99 Aligned_cols=151 Identities=24% Similarity=0.392 Sum_probs=125.5
Q ss_pred cEEEEEc-cChHHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 4 VKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~--~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+||||+| +|.+|+.++|.|.++ |.++++.+... .| .|+.+.+.|+.+.+ +
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~~-------------aG~~~~~~~~~~~~-~ 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------RS-------------QGRKLAFRGQEIEV-E 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------TT-------------SSCEEEETTEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------cc-------------CCCceeecCCceEE-E
Confidence 6999999 999999999999887 56666666432 11 14456677777666 3
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC-----CCCCeEEeccCc-cccCCC-CcEEEcCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNE-NEYKPE-LNIVSNAS 153 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps-----~d~p~~V~gVN~-~~~~~~-~~IVSnaS 153 (227)
+-+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||+.++ +|+|++|||||+ +.++.. .++||||+
T Consensus 55 ~~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpg 128 (344)
T 3tz6_A 55 DAETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPN 128 (344)
T ss_dssp ETTTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCC
T ss_pred eCCHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCC
Confidence 33444 343 89999999999999999999999999 4787776 357999999999 888753 68999999
Q ss_pred hhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 154 CtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
|+|||++|+++||+++|||+++.|||+|++|+.+
T Consensus 129 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG 162 (344)
T 3tz6_A 129 CTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSG 162 (344)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGC
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEEeccCCCccC
Confidence 9999999999999999999999999999999998
No 37
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.93 E-value=2.6e-27 Score=216.91 Aligned_cols=154 Identities=18% Similarity=0.166 Sum_probs=120.8
Q ss_pred cEEEEEc-cChHHHHHHH-HHHcCC--CceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 4 VKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r-~l~~~~--~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
+||||+| +|.+|+.++| .|.++| .++++.+... | .|+-. . .+.|+.+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG~~~----~-------~~~~~~~~~~ 54 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------Q-IGVPA----P-------NFGKDAGMLH 54 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-TTSBC----C-------CSSSCCCBCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------c-cCcCH----H-------HhCCCceEEE
Confidence 4899999 9999999999 888887 4676666432 1 22210 0 0223333332
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCCC--C--cEEE
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIVS 150 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~~--~--~IVS 150 (227)
...+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++||
T Consensus 55 ~~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 130 (370)
T 3pzr_A 55 DAFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFV 130 (370)
T ss_dssp ETTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEE
Confidence 2112333 32 899999999999999999999999998899999974 47999999999988642 3 4699
Q ss_pred cCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 151 naSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
||||+|||++|+|+||+++|||+++.|||+|++|++.
T Consensus 131 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG 167 (370)
T 3pzr_A 131 GGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAG 167 (370)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTC
T ss_pred cCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccC
Confidence 9999999999999999999999999999999999997
No 38
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.93 E-value=3.5e-27 Score=215.35 Aligned_cols=166 Identities=16% Similarity=0.179 Sum_probs=121.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+| +|.+|+.++|.|.++|.++++.+......=+.+...+.+. .|..+. . +++.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~------------~~~~~~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-K------------EIADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-H------------HHHTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-c------------ccccceE-Ee
Confidence 58999999 8999999999999999999999865421001111110000 000000 0 0011122 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC---CCCCeEEeccCccccCC--C--------CcE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps---~d~p~~V~gVN~~~~~~--~--------~~I 148 (227)
-+++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++. +++|++|||||.+.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23443 32 89999999999999999999999999643344443 25799999999999853 1 259
Q ss_pred EEcCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 149 VSnaSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
||||+|+|+|+++.|+||+++|||+++.|||+|++|++|
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG 186 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAG 186 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGC
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCC
Confidence 999999999999999999999999999999999999999
No 39
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.93 E-value=3.5e-27 Score=215.35 Aligned_cols=166 Identities=16% Similarity=0.179 Sum_probs=121.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+| +|.+|+.++|.|.++|.++++.+......=+.+...+.+. .|..+. . +++.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~------------~~~~~~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-K------------EIADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-H------------HHHTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-c------------ccccceE-Ee
Confidence 58999999 8999999999999999999999865421001111110000 000000 0 0011122 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC---CCCCeEEeccCccccCC--C--------CcE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps---~d~p~~V~gVN~~~~~~--~--------~~I 148 (227)
-+++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++. +++|++|||||.+.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23443 32 89999999999999999999999999643344443 25799999999999853 1 259
Q ss_pred EEcCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 149 VSnaSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
||||+|+|+|+++.|+||+++|||+++.|||+|++|++|
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG 186 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAG 186 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGC
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCC
Confidence 999999999999999999999999999999999999999
No 40
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.93 E-value=5.6e-27 Score=215.22 Aligned_cols=155 Identities=17% Similarity=0.150 Sum_probs=120.6
Q ss_pred ccEEEEEc-cChHHHHHHH-HHHcCC--CceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 3 KVKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r-~l~~~~--~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
++||||+| +|.+|+.++| .|.++| .++++.+.... .|+-. . .+.|+.+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~---------------aG~~~----~-------~~~~~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN---------------AGGKA----P-------SFAKNETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC---------------TTSBC----C-------TTCCSCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh---------------cCCCH----H-------HcCCCceEE
Confidence 57999999 9999999999 888877 46666554321 12100 0 022322233
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccCCC--C--cEE
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIV 149 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~~~--~--~IV 149 (227)
....+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. . ++|
T Consensus 58 ~~~~~~~~--~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSIDD--LK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChhH--hc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 21112222 43 899999999999999999999999998889999973 46999999999988642 3 459
Q ss_pred EcCChhhHhHHHHHHHHhhhcCeeEEEEEEEeeccCCC
Q 027137 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIR 187 (227)
Q Consensus 150 SnaSCtTn~Lap~lk~L~~~fgI~~~~~TTvha~t~~q 187 (227)
|||||+|||++|+|+||+++|+|+++.|||+|++|++.
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG 171 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAG 171 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTC
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccc
Confidence 99999999999999999999999999999999999997
No 41
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.92 E-value=7.8e-26 Score=205.93 Aligned_cols=199 Identities=12% Similarity=0.023 Sum_probs=147.3
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC-----CceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCE
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~-----~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk 74 (227)
|+++||+|+| +|++|+.++|.|.+++ .++++++++.. +... ++++.|++|. +. .+ +.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~agk-----~~~~~~~~l~-~~-----~~-~~---- 69 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAGS-----TLGEHHPHLT-PL-----AH-RV---- 69 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTTS-----BGGGTCTTCG-GG-----TT-CB----
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCCC-----chhhhccccc-cc-----ce-ee----
Confidence 5458999999 9999999999999988 89999998642 2111 2567777765 21 01 11
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC--C-C--------------CeEEecc
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--D-A--------------PMFVVGV 137 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~--d-~--------------p~~V~gV 137 (227)
+ .+.+++. |. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. + + |..+|++
T Consensus 70 ---~-~~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 70 ---V-EPTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp ---C-EECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred ---e-ccCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 1 1122222 54 899999999999999999999 99985333344432 2 2 7777777
Q ss_pred --CccccCCCCcEEEcCChhhHhHHHHHHHHhhhcCee-EEEEEEEeeccCCC------CCCCccccchhhhhh------
Q 027137 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITGIR------PKKLWMGHHQRIGEV------ 202 (227)
Q Consensus 138 --N~~~~~~~~~IVSnaSCtTn~Lap~lk~L~~~fgI~-~~~~TTvha~t~~q------~~~d~r~~r~a~~~~------ 202 (227)
|.+.+. ..++||||+|+|+|+++.|+||+++++|+ ++.|+|+|++|++. ++.++|+.+..+-++
T Consensus 141 ~~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~h~h 219 (352)
T 2nqt_A 141 PGARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRH 219 (352)
T ss_dssp TTHHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTTTSTT
T ss_pred ccCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccccHHHHhhhcccccCCCccee
Confidence 999887 45899999999999999999999999999 99999999999994 233466666543333
Q ss_pred --------------hhccccceeeeccCchhhhhhccc
Q 027137 203 --------------AGLLHSTSFLAVLEPLRLLERSCL 226 (227)
Q Consensus 203 --------------~~~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
+++++.|..++|+..-.+.+.++.
T Consensus 220 ~pEi~~e~~ki~~~~~~v~ft~~rvP~~rG~~~ti~~~ 257 (352)
T 2nqt_A 220 TPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTAR 257 (352)
T ss_dssp HHHHHHHHHTTCSSCCEEEEEEEECSCSSCEEEEEEEE
T ss_pred cHHHHHHHHHHhCCCCCEEEEEEEEccccEEEEEEEEE
Confidence 346788888888887776665543
No 42
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.91 E-value=5.3e-25 Score=202.34 Aligned_cols=166 Identities=23% Similarity=0.322 Sum_probs=120.3
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC-C-CcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEE
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND-P-FITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd-~-~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~ 77 (227)
|+++||||+| +|.+|+.++|.|.++|.++++.+.. . ..+-. +... | +|. . +..|..+.+.+.
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~-~~~~------~-~~~-~------~~~~p~~~~~~~ 81 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKK-YKDA------A-SWK-Q------TETLPETEQDIV 81 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB-HHHH------C-CCC-C------SSCCCHHHHTCB
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCC-HHHh------c-ccc-c------ccccccccccce
Confidence 6779999999 9999999999999999999988742 2 11111 1000 1 111 0 000000011122
Q ss_pred EEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeccCccccC---------
Q 027137 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYK--------- 143 (227)
Q Consensus 78 v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-----d~p~~V~gVN~~~~~--------- 143 (227)
+ ++-++++ .|. ++|+||+|+|.+.+++.++.++++|++ ||+.+++ |+|++|+++|++.|+
T Consensus 82 v-~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~--VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~ 155 (381)
T 3hsk_A 82 V-QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLA--VVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQA 155 (381)
T ss_dssp C-EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHH
T ss_pred E-EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCE--EEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhh
Confidence 2 2223331 354 899999999999999999999999994 6776652 479999999999885
Q ss_pred ------CCCcEEEcCChhhHhHHHHHHHHhhhcC-eeEEEEEEEeeccCCC
Q 027137 144 ------PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITGIR 187 (227)
Q Consensus 144 ------~~~~IVSnaSCtTn~Lap~lk~L~~~fg-I~~~~~TTvha~t~~q 187 (227)
...++|+||+|+|+|+++.|+||+++|| |+++.|+|+|++|++|
T Consensus 156 ~~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG 206 (381)
T 3hsk_A 156 VSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAG 206 (381)
T ss_dssp HHTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC--
T ss_pred cccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCC
Confidence 2356999999999999999999999999 9999999999999999
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.89 E-value=4.2e-24 Score=193.51 Aligned_cols=198 Identities=16% Similarity=0.158 Sum_probs=137.8
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
+||+|+| +|.+|+.+++.|.++|+++++++.... +.+..- -++...|..|. +. ..+.+ ++-
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~-~~~saG--k~~~~~~p~~~--------~~------~~~~v-~~~ 66 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA-QSNDAG--KLISDLHPQLK--------GI------VELPL-QPM 66 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET-TCTTTT--SBHHHHCGGGT--------TT------CCCBE-EEE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC-chhhcC--CchHHhCcccc--------Cc------cceeE-ecc
Confidence 7999999 899999999999998999999886531 000000 00111121122 10 01222 111
Q ss_pred -CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC----C--CC---------------eEEecc---
Q 027137 83 -NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK----D--AP---------------MFVVGV--- 137 (227)
Q Consensus 83 -~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~----d--~p---------------~~V~gV--- 137 (227)
+++++. .++|+||+|+|.+.+++.++.|+++|+| ||+.+++ | +| .+|||+
T Consensus 67 ~~~~~~~---~~~Dvvf~a~p~~~s~~~~~~~~~~g~~--vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEv 141 (337)
T 3dr3_A 67 SDISEFS---PGVDVVFLATAHEVSHDLAPQFLEAGCV--VFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEW 141 (337)
T ss_dssp SSGGGTC---TTCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTT
T ss_pred CCHHHHh---cCCCEEEECCChHHHHHHHHHHHHCCCE--EEEcCCccccCCcccchhhccccccChhhhcceEEEcccc
Confidence 333331 2899999999999999999999999995 5555542 2 21 345555
Q ss_pred CccccCCCCcEEEcCChhhHhHHHHHHHHhh--hcCeeEE-EEEEEeeccCCC------CCCCccccch-------hhhh
Q 027137 138 NENEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITGIR------PKKLWMGHHQ-------RIGE 201 (227)
Q Consensus 138 N~~~~~~~~~IVSnaSCtTn~Lap~lk~L~~--~fgI~~~-~~TTvha~t~~q------~~~d~r~~r~-------a~~~ 201 (227)
|.+.+.. .++||||+|+|+|+++.|+||++ .|+++++ .|+|+|++|++| .+.++|.-+. -..+
T Consensus 142 n~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~~~~~n~~py~~~~h~h~Pe 220 (337)
T 3dr3_A 142 CGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPE 220 (337)
T ss_dssp CCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTSGGGCSEEECSTTTCTHHHH
T ss_pred CHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCccccccccccccceEccCcccceechh
Confidence 9998864 68999999999999999999999 6999999 999999999997 2333331111 3556
Q ss_pred hhh----ccccceeeeccCchhhhhhcc
Q 027137 202 VAG----LLHSTSFLAVLEPLRLLERSC 225 (227)
Q Consensus 202 ~~~----~~~~~~~~~~~~~~~~~~~~~ 225 (227)
|.+ +++.|..++|+....+.+.++
T Consensus 221 i~~~l~~~v~ft~~rvPv~rG~~~ti~~ 248 (337)
T 3dr3_A 221 IATHLGADVIFTPHLGNFPRGILETITC 248 (337)
T ss_dssp HHHHHTSCCEEEEEEESSSSCEEEEEEE
T ss_pred HHhhhcCCEEEEEEEecccccEEEEEEE
Confidence 666 788889999988777665544
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.80 E-value=2e-20 Score=170.30 Aligned_cols=154 Identities=14% Similarity=0.162 Sum_probs=119.6
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+| +|.+|+.++|.|.++|.++|+.+.... +.. -+|++.|+.|. +.+.+ ++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~aG-----~~~~~~~p~~~----------------~~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YAG-----KKLEEIFPSTL----------------ENSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TTT-----SBHHHHCGGGC----------------CCCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-ccc-----CChHHhChhhc----------------cCceE-Ee
Confidence 48999999 999999999999999999999998642 111 12333343221 11222 11
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC---C--C------------------CeEEeccC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---D--A------------------PMFVVGVN 138 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~---d--~------------------p~~V~gVN 138 (227)
.+++++ |. ++|+||+|+|...+++.++.+ +|+ +|||++++ + + |..+|++|
T Consensus 70 ~~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223332 23 799999999999999999877 787 58999873 2 2 67777889
Q ss_pred ccccCCCCcEEEcCChhhHhHHHHHHHHhhhcCee--EEEEEEEeeccCCC
Q 027137 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIR 187 (227)
Q Consensus 139 ~~~~~~~~~IVSnaSCtTn~Lap~lk~L~~~fgI~--~~~~TTvha~t~~q 187 (227)
.+.+.. .++|+||+|+|+++.+.|+||+++++|+ ++.++|+|++|+++
T Consensus 143 ~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG 192 (351)
T 1vkn_A 143 REEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAG 192 (351)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGC
T ss_pred HHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccC
Confidence 988874 5899999999999999999999999999 99999999999999
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.67 E-value=6.9e-08 Score=86.07 Aligned_cols=154 Identities=18% Similarity=0.175 Sum_probs=96.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHc-CCCceEEEEeCCCcChhh-hhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDY-MTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~-~~~~~ivaInd~~~~~~~-~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
|+++||||+|+|.+|+.+++.+.+ .++++++++.|.. ++. ...+ ...+|. ... ..+ +
T Consensus 2 ~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~--~~~~~~~~---a~~~g~----~~~--~~~----------~ 60 (312)
T 1nvm_B 2 NQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGID--AASDGLAR---AQRMGV----TTT--YAG----------V 60 (312)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSC--TTCHHHHH---HHHTTC----CEE--SSH----------H
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCC--hhhhHHHH---HHHcCC----Ccc--cCC----------H
Confidence 137999999999999999999976 7889999999973 322 1011 011110 000 000 0
Q ss_pred EeecCC-CCCCCccCCccEEEeecCcccCHHhHHHHHhC--CCCEEEEeCCCCCCCeEEeccCccccCC--CCcEEEcCC
Q 027137 79 FGVRNP-EEIPWAETGAEYVVESTGVFTDKDKAAAHLKG--GAKKVIISAPSKDAPMFVVGVNENEYKP--ELNIVSNAS 153 (227)
Q Consensus 79 ~~~~~p-~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~--GakkVIisaps~d~p~~V~gVN~~~~~~--~~~IVSnaS 153 (227)
.+. ++.+| .++|+||+|||.....+.+...+++ |. .|+.-.|..-.|..++.+|.+.... ...+++++.
T Consensus 61 ---e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g 134 (312)
T 1nvm_B 61 ---EGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGG 134 (312)
T ss_dssp ---HHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHH
T ss_pred ---HHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCcccccccccCccCHHHHHhccCCcEEEeCC
Confidence 000 11112 2799999999998889999999998 86 3444344322467777888776532 124666666
Q ss_pred hhhHhHHHHHHHHhhhcCeeEE-EEEEEeecc
Q 027137 154 CTTNCLAPLAKVIHDKFGIVEG-LMTTVHSIT 184 (227)
Q Consensus 154 CtTn~Lap~lk~L~~~fgI~~~-~~TTvha~t 184 (227)
|. ..|++..+.+.+..... .+.++.+.+
T Consensus 135 ~~---~ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 135 QA---TIPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp HH---HHHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred cc---cchHHHHhhhhccchhHhHhhhhhccc
Confidence 64 46777777777776543 456666554
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.38 E-value=4.8e-07 Score=80.42 Aligned_cols=90 Identities=20% Similarity=0.270 Sum_probs=66.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
|+++||||+|+|++|+.+++.+.+.++++++++.|+..+. .+ + . | +.++
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~----------------------~----~-g--v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DT----------------------K----T-P--VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SS----------------------S----S-C--EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hh----------------------c----C-C--Ccee-
Confidence 7789999999999999999999888889999999873111 00 0 0 1 1121
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++. .++|+|++||+.....+.+...+++|. .||++.|
T Consensus 50 -~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp 90 (320)
T 1f06_A 50 -ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYD 90 (320)
T ss_dssp -GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCC
T ss_pred -CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCC
Confidence 2333432 378999999999888888889999985 5777665
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.28 E-value=9.8e-07 Score=77.85 Aligned_cols=91 Identities=19% Similarity=0.242 Sum_probs=62.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
|+++||||+|+|+||+.+++.+.+.++++++++.|+ +++.... +| + +.. .
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g--------------~-----~~~--~ 56 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------EL--------------Q-----PFR--V 56 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CC--------------T-----TSC--E
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cC--------------C-----CcC--C
Confidence 446999999999999999999988888999999987 3332210 11 0 000 0
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
..+..+. .++|+|+.||+.....+.+...+++|. .|+...|
T Consensus 57 ~~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 57 VSDIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp ESSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 1222222 278999999999999999999999985 4655434
No 48
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.15 E-value=4.2e-06 Score=75.08 Aligned_cols=95 Identities=22% Similarity=0.312 Sum_probs=67.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
|+++||||+|+|.+|+.+++++.+.+++++++|.|+ +.+.....-+|+- . ++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~g~----------~---------------~~- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQKGL----------K---------------IY- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTTTC----------C---------------BC-
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhcCC----------c---------------ee-
Confidence 346899999999999999999988888999999997 4544321111110 0 00
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 111111 01237899999999999999999999999 56888766
No 49
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.12 E-value=2.5e-06 Score=75.88 Aligned_cols=97 Identities=21% Similarity=0.215 Sum_probs=64.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHc-------CCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQ-------RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~-------~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~g 73 (227)
|+++||||+|+|+||+.+++++.. .++++|+||+|+ +.+....+. ..+| ....+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a---~~~g----~~~~y---------- 83 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARA---GEFG----FEKAT---------- 83 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHH---HHHT----CSEEE----------
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHH---HHhC----CCeec----------
Confidence 678999999999999999887642 357899999998 444332221 1111 00001
Q ss_pred EEEEEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 74 k~I~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.|.+++ ..+.++|.|+=||+...-.+.+...+++|. .|++--|
T Consensus 84 --------~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 84 --------ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp --------SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred --------CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 111111 112378999999999999999999999995 5777666
No 50
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.11 E-value=5.7e-06 Score=74.09 Aligned_cols=94 Identities=21% Similarity=0.375 Sum_probs=66.6
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|+. +++.+.+.+++++++|.|+ +.+..+.. | . + +. ++
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~--~-------~-~-~~---------------~~ 54 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKRD--F-------P-D-AE---------------VV 54 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHHH--C-------T-T-SE---------------EE
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHhh--C-------C-C-Cc---------------eE
Confidence 34689999999999996 7888877788999999997 44442211 1 1 0 01 11
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+.||+.....+.+...+++| |.|++--|
T Consensus 55 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 --HELEEIT-NDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp --SSTHHHH-TCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 1222221 1237899999999999999999999999 56887666
No 51
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.05 E-value=6.5e-06 Score=73.76 Aligned_cols=98 Identities=24% Similarity=0.253 Sum_probs=67.4
Q ss_pred CCccEEEEEccChHHHHHHHHHH-cCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~-~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
||++||||+|+|.+|+.+++++. ..+++++++|.|+ +.+....+. ..+|. .. .++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g~----~~---------------~~~ 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI--VAGRAQAAL---DKYAI----EA---------------KDY 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS--STTHHHHHH---HHHTC----CC---------------EEE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHH---HHhCC----CC---------------eee
Confidence 67899999999999999999998 6788999999997 443322111 11110 00 011
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 77 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 --NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp --SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 112211 01126899999999999999999999999 56888777
No 52
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.04 E-value=7.3e-06 Score=72.35 Aligned_cols=96 Identities=21% Similarity=0.272 Sum_probs=65.2
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+++||||+|+|.||+.+++++.+.+++++++|.|+ +.+....+ ...+ + + + .++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~--~~~~~~~~---a~~~------------~--~-----~-~~~-- 56 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR--TLESAQAF---ANKY------------H--L-----P-KAY-- 56 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS--CSSTTCC------CC------------C--C-----S-CEE--
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHH---HHHc------------C--C-----C-ccc--
Confidence 46899999999999999999987788999999997 33222111 0000 0 0 0 011
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++.-|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 99 (329)
T 3evn_A 57 DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKP 99 (329)
T ss_dssp SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccC
Confidence 1222221 1237899999999999999999999999 46888777
No 53
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.03 E-value=7.7e-06 Score=70.49 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=31.5
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~ 37 (227)
|+|+||+|+|+|++|+.+++.+.+.++ +++++.|..
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~ 36 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENT 36 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecC
Confidence 656899999999999999999999988 999998873
No 54
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.03 E-value=8.8e-06 Score=72.86 Aligned_cols=93 Identities=22% Similarity=0.376 Sum_probs=66.0
Q ss_pred CccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+++||||+|+|.+|+. +++.+.+.+++++++|.|+ +++..+ .+|. + + +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~---------~~~~-~-~---------------~~~- 54 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER--SKELSK---------ERYP-Q-A---------------SIV- 54 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS--SCCGGG---------TTCT-T-S---------------EEE-
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHH---------HhCC-C-C---------------ceE-
Confidence 4689999999999996 8888888888999999997 333321 1111 0 0 111
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (362)
T 3fhl_A 55 -RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKP 97 (362)
T ss_dssp -SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 1222221 1236999999999999999999999999 46888766
No 55
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.02 E-value=2.9e-06 Score=75.32 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=67.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCC-------ceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDD-------VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~-------~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~g 73 (227)
|+++||||+|+|.||+.+++++...|+ .+|+||+|+ +++....+. ..+| .. .
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a---~~~g----~~-~----------- 62 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAA---GKLG----WS-T----------- 62 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHH---HHHT----CS-E-----------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHH---HHcC----CC-c-----------
Confidence 778999999999999999998865443 499999998 555443221 1111 00 0
Q ss_pred EEEEEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 74 k~I~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++| |.|++--|
T Consensus 63 ----~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 107 (390)
T 4h3v_A 63 ----TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKP 107 (390)
T ss_dssp ----EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred ----cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecC
Confidence 10 112221 11237999999999999999999999999 56888766
No 56
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.01 E-value=1.1e-05 Score=71.82 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=67.0
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|++||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+.+ .+|- .. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~----~~-~------------------ 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC----AG-D------------------ 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC----CC-C------------------
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC----CC-c------------------
Confidence 46899999999999999999988888999999997 4544322211 0110 00 0
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++.-|
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 111111 01136899999999998899999999999 45888776
No 57
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.00 E-value=1.3e-05 Score=71.75 Aligned_cols=36 Identities=31% Similarity=0.474 Sum_probs=31.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcC------CCceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~------~~~~ivaInd~ 36 (227)
|+++||||+|+|.||+.+++.+.+. +++++++|.|.
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 7789999999999999999999764 57999999997
No 58
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.00 E-value=1e-05 Score=72.56 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=67.0
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|+. +++++.+.+++++++|.|+ +++....+. . +|. .. . ++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~---~~~-~~-~---------------~~ 57 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVH---R---FIS-DI-P---------------VL 57 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGG---G---TSC-SC-C---------------EE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHH---H---hcC-CC-c---------------cc
Confidence 34689999999999995 8899988888999999997 555432221 1 111 00 0 00
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 58 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 --DNVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp --SSHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred --CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1222211 12368999999999988899999999994 5777666
No 59
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.99 E-value=1.1e-05 Score=71.92 Aligned_cols=94 Identities=24% Similarity=0.429 Sum_probs=66.8
Q ss_pred CC-ccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 1 m~-~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
|| ++||||+|+|.+|+. +++.+.+.+++++++|.|+ +++... . ++. +. . +
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~------~---~~~-~~-~---------------~ 55 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH------A---DWP-AI-P---------------V 55 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH------T---TCS-SC-C---------------E
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH------h---hCC-CC-c---------------e
Confidence 53 699999999999996 8888888888999999997 454432 0 111 00 0 1
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+ .+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 56 V--SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp E--SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred E--CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 0 1122221 1236899999999999999999999999 56877666
No 60
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.99 E-value=8.2e-06 Score=72.17 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=66.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
|+++||||+|+|.+|+.+++.+.+.+++++++|.|+ +.+....+. ..+|- . . ++
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~---~~~~~----~-~---------------~~- 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMA---KELAI----P-V---------------AY- 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHH---HHTTC----C-C---------------CB-
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHH---HHcCC----C-c---------------ee-
Confidence 346899999999999999999988888999999997 444332221 11110 0 0 00
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 99 (330)
T 3e9m_A 57 -GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKP 99 (330)
T ss_dssp -SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCC
Confidence 111111 011268999999999999999999999994 5887666
No 61
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.98 E-value=1.1e-05 Score=71.06 Aligned_cols=94 Identities=29% Similarity=0.338 Sum_probs=66.5
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|++||||+|+|.+|+.+++.+.+.++++++++.|+ +.+....+.+ .+ . .. +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~---~-~~--~------------------ 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAG---AY---G-CE--V------------------ 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HT---T-CE--E------------------
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHH---Hh---C-CC--c------------------
Confidence 35899999999999999999988888999999997 4544322211 01 1 00 1
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++.-|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 111111 01126899999999999999999999999 56787666
No 62
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.96 E-value=2.7e-05 Score=70.01 Aligned_cols=88 Identities=22% Similarity=0.266 Sum_probs=60.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC--------CceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEEC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~--------~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~ 72 (227)
|+++||||+|+|.||+.+++.+.+.+ ++++++|.|.. ++.. .+ +. .+
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~---------~~-~~-------~~------ 55 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKP---------RA-IP-------QE------ 55 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSC---------CS-SC-------GG------
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHh---------hc-cC-------cc------
Confidence 66799999999999999999998766 68999999862 2110 00 11 00
Q ss_pred CEEEEEEeecCCCCCCCccCCccEEEeecCcc-cCHHhHHHHHhCCCCEEEEeC
Q 027137 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 73 gk~I~v~~~~~p~~i~W~~~~vDiVve~tG~f-~~~~~a~~hl~~GakkVIisa 125 (227)
.+ ..|++++- ++|+|+||||.. ...+.+...+++|. -|+++
T Consensus 56 ----~~--~~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 56 ----LL--RAEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp ----GE--ESSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred ----cc--cCCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 01 13555554 799999999876 34567778899985 34543
No 63
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.94 E-value=2.7e-06 Score=74.52 Aligned_cols=97 Identities=26% Similarity=0.301 Sum_probs=62.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|.++||+|+| +|++|+.+++.+.+.++++++++-|...+. . .|+-. +++- | +. .| +.++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~-~----------~G~d~-gel~---g--~~-~g--v~v~ 64 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP-Q----------LGQDA-GAFL---G--KQ-TG--VALT 64 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT-T----------TTSBT-TTTT---T--CC-CS--CBCB
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc-c----------ccccH-HHHh---C--CC-CC--ceec
Confidence 6569999999 999999999999988999999998863111 1 11111 1100 1 00 01 1121
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.+++++. .++|+|||+|......+.+...+++|.+ +|+
T Consensus 65 --~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVi 102 (272)
T 4f3y_A 65 --DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVI 102 (272)
T ss_dssp --CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred --CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2232221 1589999999887777888888899975 666
No 64
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.93 E-value=1.1e-05 Score=71.46 Aligned_cols=95 Identities=28% Similarity=0.437 Sum_probs=66.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
++||||+|+|.+|+.+++.+.+.+++++++|.|+ +.+....+. ..+|. . . ++ .
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~---~~~~~----~-~---------------~~--~ 54 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMK---EKLGV----E-K---------------AY--K 54 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHH---HHHTC----S-E---------------EE--S
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHH---HHhCC----C-c---------------ee--C
Confidence 4899999999999999999988888999999997 454432221 11110 0 0 00 1
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+++++ ..+.++|+|+-||+.....+.+...+++| |.|++.-|
T Consensus 55 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 55 DPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 11111 01127899999999998889999999999 56888766
No 65
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.91 E-value=2.1e-05 Score=70.60 Aligned_cols=92 Identities=22% Similarity=0.329 Sum_probs=65.0
Q ss_pred ccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+|+|.+|+. +++.+.+.+++++++|.|+ +.+.... + +. +. . ++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~-------~~-~~-~---------------~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D-------LP-DV-T---------------VI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H-------CT-TS-E---------------EE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h-------CC-CC-c---------------EE--
Confidence 589999999999996 8888888888999999997 4444321 1 11 00 1 00
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAAV-QHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp SCHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 1122111 1237899999999999999999999999 45777666
No 66
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.90 E-value=3.3e-05 Score=68.33 Aligned_cols=96 Identities=24% Similarity=0.376 Sum_probs=67.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++++||||+|+|.+|+.+++++.+.++++++++.|+ +.+....+. ..+| +. ++
T Consensus 2 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g------~~---------------~~- 54 (344)
T 3euw_A 2 SLTLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLA---EANG------AE---------------AV- 54 (344)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHH---HTTT------CE---------------EE-
T ss_pred CCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHH---HHcC------Cc---------------ee-
Confidence 036899999999999999999988888999999997 444432221 1011 00 11
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 55 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 97 (344)
T 3euw_A 55 -ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKP 97 (344)
T ss_dssp -SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECC
Confidence 112221 112378999999999999999999999994 5787766
No 67
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.89 E-value=3.8e-05 Score=70.74 Aligned_cols=103 Identities=24% Similarity=0.304 Sum_probs=68.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhc-ccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|+.+++++...+++++++|.|+ +.+....+.+ +. .+|. + .. +++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g~-~--~~---------------~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNGK-K--PA---------------KVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTTC-C--CC---------------EEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcCC-C--CC---------------cee
Confidence 457999999999999999999988888999999997 5554432221 10 0110 0 00 111
Q ss_pred e--ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 G--VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~--~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
. +.+.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 77 ~~~~~~~~~ll-~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 77 GNGNDDYKNML-KDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp CSSTTTHHHHT-TCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred ccCCCCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 1 01222221 12379999999999998999999999994 5777655
No 68
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.88 E-value=1.7e-05 Score=70.75 Aligned_cols=96 Identities=13% Similarity=0.138 Sum_probs=66.7
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr-~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|+ .+++++.+.+++++++|.|+ +.+....+. ..+| + ..+
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g--------------~-------~~~ 78 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFT---ERFG--------------G-------EPV 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHH---HHHC--------------S-------EEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHH---HHcC--------------C-------CCc
Confidence 5579999999999998 78999988888999999997 444332211 1011 0 000
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 79 --~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 --EGYPALL-ERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp --ESHHHHH-TCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 1122211 12378999999999999999999999994 5777666
No 69
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.88 E-value=2.1e-05 Score=69.74 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=66.7
Q ss_pred ccEEEEEccChHHHHHHHHHH-cCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~-~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+|+|.+|+.+++.+. ..+++++++|.|+ +.+....+. ..+|. ... ++
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~---~~~g~----~~~---------------~~-- 55 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVV---EQYQL----NAT---------------VY-- 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHH---HHTTC----CCE---------------EE--
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCC----CCe---------------ee--
Confidence 589999999999999999998 6688999999997 444432221 11110 000 11
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++.-|
T Consensus 56 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 PNDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 1122110 1126899999999999999999999999 56887766
No 70
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.87 E-value=1.2e-05 Score=71.37 Aligned_cols=89 Identities=20% Similarity=0.237 Sum_probs=65.1
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr-~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.||+ .+++++.+.++++++||.|+. .+. +. + .++
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~--~~~-------------~g---~---------------~~~ 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH--GTV-------------EG---V---------------NSY 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS--CCC-------------TT---S---------------EEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC--hhh-------------cC---C---------------Ccc
Confidence 5579999999999999 799999988899999999973 210 00 0 010
Q ss_pred eecCCCCCCCcc-CCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~-~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+ .++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 70 --~~~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 --TTIEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp --SSHHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred --CCHHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 1122110 11 26899999999999999999999999 56777666
No 71
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.87 E-value=2.3e-05 Score=73.15 Aligned_cols=93 Identities=17% Similarity=0.284 Sum_probs=61.1
Q ss_pred CccEEEEEccChHHHHHHHHHHcC---------CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEEC
Q 027137 2 GKVKIGINGFGRIGRLVARVILQR---------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~---------~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~ 72 (227)
+++||||+|+|.||+.+++.+.++ +++++++|.|. +.+....++ + +..+ .
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~--~---------------~~~~-~- 67 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA--G---------------GLPL-T- 67 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH--T---------------TCCE-E-
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc--c---------------cCcc-c-
Confidence 469999999999999998877532 57999999997 333221111 0 0000 0
Q ss_pred CEEEEEEeecCCCCCCCccCCccEEEeecCc-ccCHHhHHHHHhCCCCEEEEeCC
Q 027137 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 73 gk~I~v~~~~~p~~i~W~~~~vDiVve~tG~-f~~~~~a~~hl~~GakkVIisap 126 (227)
.|++++ ..+.++|+|++|||. ....+.+...+++|. .|+..+|
T Consensus 68 ---------~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 68 ---------TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp ---------SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred ---------CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 122211 112378999999985 677788889999995 4655555
No 72
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.87 E-value=7.4e-06 Score=74.42 Aligned_cols=95 Identities=20% Similarity=0.209 Sum_probs=65.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--------CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCE
Q 027137 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~--------~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk 74 (227)
++||||+|+|.||+.+++++.+. ++++|+||+|+ +++....+. ..+| ....+
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a---~~~~----~~~~y----------- 85 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHA---AKLG----AEKAY----------- 85 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHH---HHHT----CSEEE-----------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHH---HHcC----CCeEE-----------
Confidence 69999999999999999988643 35899999998 555433221 1111 01011
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.|.+++ ..+.++|+|+-||+...-.+.+...+++| |-|++--|
T Consensus 86 -------~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 128 (412)
T 4gqa_A 86 -------GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKP 128 (412)
T ss_dssp -------SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred -------CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecC
Confidence 111111 11237899999999999999999999999 46888777
No 73
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.85 E-value=1.4e-05 Score=70.66 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=65.5
Q ss_pred ccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|+||||+|+|.||+. ++.++.+.++++|+||.|+ +++....+. ..+| .. . ++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a---~~~g----~~-~---------------~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMA---DRFS----VP-H---------------AF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHH---HHHT----CS-E---------------EE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHH---HHcC----CC-e---------------ee--
Confidence 589999999999986 4677778889999999998 555432221 1111 00 0 00
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++ ..+.++|.|+=||+...-.+.+...+++|. -|++--|
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 111111 112378999999999999999999999994 5777666
No 74
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.84 E-value=2.6e-05 Score=69.38 Aligned_cols=95 Identities=23% Similarity=0.366 Sum_probs=65.0
Q ss_pred ccEEEEEccChHHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr-~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+|+|.+|+ .+++.+.+.+++++++|.|+. ..+.++- +| |. . + ++++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~--~~----~~-~--------~---------~~~~-- 54 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAA--PF----KE-K--------G---------VNFT-- 54 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHH--HH----HT-T--------T---------CEEE--
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHH--hh----CC-C--------C---------CeEE--
Confidence 58999999999998 688888778889999999973 2222211 11 11 0 0 0111
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 1222221 1236899999999999999999999999 56777666
No 75
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.82 E-value=2.1e-05 Score=68.63 Aligned_cols=101 Identities=19% Similarity=0.223 Sum_probs=64.4
Q ss_pred CCccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||+|+|+ |++|+.+++.+.+.++++++++.|.. .+.. .-.| .|.+. + +.-.| +.+.
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~--~~~~---~g~d--~~~~~--------g--~~~~~--v~~~ 63 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE--GSSL---LGSD--AGELA--------G--AGKTG--VTVQ 63 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT--TCTT---CSCC--TTCSS--------S--SSCCS--CCEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--chhh---hhhh--HHHHc--------C--CCcCC--ceec
Confidence 34689999996 99999999998888889999998862 1110 0001 01111 0 00001 2222
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++- .++|+|+|+|......+.+...+++|.. +|+..+
T Consensus 64 --~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 --SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp --SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred --CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 3444432 2789999999777778888889999975 666443
No 76
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.82 E-value=2.4e-05 Score=68.21 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=66.1
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|+. +++.+.+.+++++++|.|+ +.+....+.+ .+|- .. +
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~----~~-~---------------- 57 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI----MP-F---------------- 57 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC----CB-C----------------
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC----CC-c----------------
Confidence 55799999999999996 8888888788999999997 5544322211 1110 00 0
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps 127 (227)
.+++++- + ++|+|+-||+.....+.+...+++|. .|++.-|.
T Consensus 58 --~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 58 --DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp --SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred --CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 1122211 1 68999999999999999999999995 47776563
No 77
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.81 E-value=2.5e-05 Score=68.48 Aligned_cols=93 Identities=18% Similarity=0.266 Sum_probs=63.4
Q ss_pred CccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+++||||+|+|.+|+. +++.+.+.++++++++.|+. .+....+. ..+| + + ++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~---~~~g--------------~-----~--~~- 56 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPIC---ESWR--------------I-----P--YA- 56 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHH---HHHT--------------C-----C--BC-
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHH---HHcC--------------C-----C--cc-
Confidence 3689999999999996 88988877789999999973 33221111 0011 0 0 00
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++.+ ..++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 57 -~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 -DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp -SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred -CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 112222 1378999999998888888888999985 4777655
No 78
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.81 E-value=3.9e-05 Score=67.66 Aligned_cols=96 Identities=19% Similarity=0.284 Sum_probs=64.8
Q ss_pred CccEEEEEccChHHHHHHHHHH-cCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~-~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+++||||+|+|.+|+.+++.+. +.++++++++.|+ +.+....+. ..+| .. .++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a---~~~g----~~----------------~~~- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAK---NELG----VE----------------TTY- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHH---HTTC----CS----------------EEE-
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHH---HHhC----CC----------------ccc-
Confidence 3689999999999999999988 6778999999997 444332211 1011 00 010
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++- .+.++|+|+.||+.....+.+...+++| |.|++.-|
T Consensus 61 -~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp 103 (346)
T 3cea_A 61 -TNYKDMI-DTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKP 103 (346)
T ss_dssp -SCHHHHH-TTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCC
Confidence 1111110 1126899999999998889999999998 45666545
No 79
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.79 E-value=4.1e-05 Score=68.31 Aligned_cols=99 Identities=13% Similarity=0.205 Sum_probs=65.9
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+++||||+|+|.+|+.+++.+.+.+++++++|.|+ +.+....+. ..+|-.. .. .++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a---~~~~~~~--~~---------------~~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFA---TANNYPE--ST---------------KIH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHH---HHTTCCT--TC---------------EEE--
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCCCC--CC---------------eee--
Confidence 46899999999999999999988888999999997 444332211 1111000 00 111
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 61 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 61 GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 112211 011268999999999988899999999994 5777555
No 80
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.78 E-value=5.9e-05 Score=66.18 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=65.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||+|+|.+|+.+++.+.+.+++++++|.|+ +.+....+ ...+| . ..++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~---~~~~~-----~---------------~~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATF---ASRYQ-----N---------------IQLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHH---GGGSS-----S---------------CEEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHH---HHHcC-----C---------------CeEe--CC
Confidence 799999999999999999988888999999997 44433221 11111 0 0111 22
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
++++- +.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 33322 2378999999999888898989999984 5777655
No 81
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.77 E-value=4.5e-05 Score=67.68 Aligned_cols=94 Identities=16% Similarity=0.219 Sum_probs=63.0
Q ss_pred ccEEEEEccChHHHH-HHH-HHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~-~~r-~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||+|+|.+|+. +++ .+...+++++++|.|+. ++.....-+ +. + . +++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~--~~~~~~~~~-------~~--------~--~-------~~~- 54 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH--AKPEEQAPI-------YS--------H--I-------HFT- 54 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS--CCGGGGSGG-------GT--------T--C-------EEE-
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC--HhHHHHHHh-------cC--------C--C-------ceE-
Confidence 589999999999985 777 44667789999999983 322211100 11 1 0 111
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp -SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 2232221 1236899999999999999999999999 56777665
No 82
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.76 E-value=6.9e-05 Score=69.91 Aligned_cols=111 Identities=13% Similarity=0.289 Sum_probs=65.1
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCC-eEE---ECCEEEE
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK-TLL---FGEKPVT 77 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~-~l~---i~gk~I~ 77 (227)
+++||||+|+|++|+.+++.+.+.+++++++|.|. +++......+ ..+|. . ..+...++. .+. -.+ .+.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~-~-~~~~~~~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGD-E-ENAREATTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSS-S-TTEEECSSHHHHHHHHHTT-CEE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCC-c-cccccccchhhhhhhhccC-Cce
Confidence 46999999999999999999888889999999997 4554433221 00120 0 011100000 000 001 112
Q ss_pred EEeecCCCCCCCccCCccEEEeecCcc-cCHHhHHHHHhCCCCEEEE
Q 027137 78 VFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 78 v~~~~~p~~i~W~~~~vDiVve~tG~f-~~~~~a~~hl~~GakkVIi 123 (227)
++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|. .|++
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK-HVv~ 137 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK-HLVM 137 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC-cEEe
Confidence 22 233322 1223799999999864 45688888999985 4543
No 83
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.74 E-value=4.1e-05 Score=67.53 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=65.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCC--CceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~--~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||+|+|.||+.+++++.+.+ ++++++|.|+ +.+....+. ..+|. ...+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a---~~~~~----~~~~----------------- 55 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFA---QKHDI----PKAY----------------- 55 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHH---HHHTC----SCEE-----------------
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHH---HHcCC----Cccc-----------------
Confidence 589999999999999999987665 4799999997 444432221 11110 0000
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 -GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp -SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 1111110 1126899999999999999999999999 56888776
No 84
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.74 E-value=2.7e-05 Score=69.24 Aligned_cols=94 Identities=20% Similarity=0.263 Sum_probs=66.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~-~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+|+|.+|+.+++.+.+. ++++++++.|+ +.+....+.+ .+| +.++
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~---------------------~~~~-- 64 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG---------------------ARGH-- 64 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC---------------------CEEE--
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC---------------------Ccee--
Confidence 58999999999999999999887 78999999997 4444322210 011 0111
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 122221 11237899999999998889999999999 56777666
No 85
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.72 E-value=1.2e-05 Score=72.04 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=30.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCC-------CceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~-------~~~ivaInd~ 36 (227)
++||||+|+|.||+.+++.+.+.+ ++++++|.|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 699999999999999999987654 5899999997
No 86
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.72 E-value=4.6e-05 Score=66.69 Aligned_cols=92 Identities=21% Similarity=0.281 Sum_probs=65.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
++||||+|+|.+|+.+++.+.+.++++++++.|+ +.+.... +. .+ +.++ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~----------~~--------~~--------~~~~--~ 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLAL----------VP--------PG--------CVIE--S 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTT----------CC--------TT--------CEEE--S
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHH----------HH--------hh--------Cccc--C
Confidence 5899999999999999999988878999999997 4433211 11 11 1111 2
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+++++- .+.++|+|+.||+.....+.+...+++| |.|++.-|
T Consensus 60 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP 101 (315)
T 3c1a_A 60 DWRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKP 101 (315)
T ss_dssp STHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCC
Confidence 233221 1137899999999998888888899999 45777655
No 87
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.71 E-value=9.8e-05 Score=67.98 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=67.1
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr-~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|+ .+++.+.+.+++++++|.|+ +.+....+. ..+|. . . . .+.++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a---~~~g~-~--~-----~--------~~~~~ 139 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVA---AEYGV-D--P-----R--------KIYDY 139 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHH---HHTTC-C--G-----G--------GEECS
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCC-C--c-----c--------ccccc
Confidence 4568999999999997 89998887778999999997 444332211 11110 0 0 0 01111
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 140 --~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 140 --SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp --SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 2233321 12378999999999988999999999994 5777555
No 88
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.64 E-value=1.5e-05 Score=70.41 Aligned_cols=97 Identities=24% Similarity=0.211 Sum_probs=62.9
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+++||+|+| +|++||.+++.+.+.++++++++-|...+ +. .|+-. +++ .| +.-.| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~-~~----------~G~d~-gel---~G--~~~~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS-SF----------VDKDA-SIL---IG--SDFLG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC-TT----------TTSBG-GGG---TT--CSCCS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-cc----------cccch-HHh---hc--cCcCC--ceee-
Confidence 368999999 99999999999999999999999987311 11 11101 110 01 00011 2221
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.|++++. .++|+|||+|......+.+...+++|.. +|+
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2344332 2689999999877777888888999975 555
No 89
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.63 E-value=5.8e-05 Score=63.63 Aligned_cols=135 Identities=21% Similarity=0.263 Sum_probs=79.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+||||+|+|++|+.+++.+.+ ++++++++.|.. .+ . .. . ..+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~--~~-~----------------------~~----------~--~~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVR--GE-H----------------------EK----------M--VRG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSS--CC-C----------------------TT----------E--ESS
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecC--cc-h----------------------hh----------h--cCC
Confidence 489999999999999999884 679999998862 10 0 00 0 022
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeccCccccC-CCCcEEEcCChhhHhHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYK-PELNIVSNASCTTNCLAP 161 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~p~~V~gVN~~~~~-~~~~IVSnaSCtTn~Lap 161 (227)
++++-- .++|+|++|++.....+.+...+++|. .||+..|.. +.+-+...+- +... ....++-.+.+... ..
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~ 116 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LD 116 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HH
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hH
Confidence 332211 278999999999888888888999986 344433321 1110000110 0001 01233322222222 23
Q ss_pred HHHHHhhhcCeeEEEEEEEeecc
Q 027137 162 LAKVIHDKFGIVEGLMTTVHSIT 184 (227)
Q Consensus 162 ~lk~L~~~fgI~~~~~TTvha~t 184 (227)
.++.... |++++.+++.|+..
T Consensus 117 ~~~~~~~--~~~~~~~~~~~~~~ 137 (236)
T 2dc1_A 117 AIFSASE--LIEEIVLTTRKNWR 137 (236)
T ss_dssp HHHHTGG--GEEEEEEEEEEEGG
T ss_pred HHHHhhc--cccEEEEEEEcChH
Confidence 4444443 89999999998863
No 90
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.60 E-value=7.3e-05 Score=65.23 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=62.3
Q ss_pred ccEEEEEccChHHHHHHHHHHc---CCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~---~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
++||||+|+|.||+.+++.+.. .++++++++.|.. . +...+ + + ..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~--------~a~~~------------g--~-------~~- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E--------LGSLD------------E--V-------RQ- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C--------CCEET------------T--E-------EB-
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H--------HHHHc------------C--C-------CC-
Confidence 6899999999999999998875 4679999999862 1 00000 1 1 00
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 55 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 --ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp --CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 122221 112379999999999999999999999994 5777666
No 91
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.57 E-value=8.4e-05 Score=66.55 Aligned_cols=34 Identities=35% Similarity=0.709 Sum_probs=31.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--------CCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~--------~~~~ivaInd~ 36 (227)
|+||||+|+|.||+.+++.+.+. +++++++|.|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 37999999999999999999876 78999999997
No 92
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.56 E-value=0.00015 Score=64.37 Aligned_cols=95 Identities=23% Similarity=0.234 Sum_probs=66.6
Q ss_pred ccEEEEEccC-hHHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~G-rIGr~~~r~l~~~-~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||+|+| .+|+.+++++.+. +++++++|.|+ +++....+. ..+|. . .++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~~~-----~---------------~~~- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFA---KMVGN-----P---------------AVF- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHH---HHHSS-----C---------------EEE-
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHH---HHhCC-----C---------------ccc-
Confidence 6899999999 8999999999887 78999999997 555433221 11110 0 011
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++ ..+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 114 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKP 114 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11236899999999998899999999999 46878766
No 93
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.54 E-value=0.00036 Score=61.18 Aligned_cols=93 Identities=20% Similarity=0.254 Sum_probs=62.7
Q ss_pred ccEEEEEccChHHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr-~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+|+|.+|+ .+++.+.+.++++++ |.|+ +.+....+. ..+|. .. .+ .
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a---~~~g~----~~---------------~~--~ 54 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLA---TRYRV----SA---------------TC--T 54 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHH---HHTTC----CC---------------CC--S
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHH---HHcCC----Cc---------------cc--c
Confidence 48999999999998 489988877789999 9997 444432221 11110 00 00 0
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
...+.+ +.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 55 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 55 DYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp STTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred CHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 111222 2378999999999888888888899885 4777655
No 94
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.52 E-value=6.5e-05 Score=67.38 Aligned_cols=95 Identities=15% Similarity=0.246 Sum_probs=62.5
Q ss_pred CccEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+++||||+|+|.+|.. ++..+. .+++++++|.|+ +++....+. ..+|. .. ++
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a---~~~~~-----~~---------------~~- 77 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFS---AVYAD-----AR---------------RI- 77 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHH---HHSSS-----CC---------------EE-
T ss_pred cCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHH---HHcCC-----Cc---------------cc-
Confidence 3689999999999964 555554 468999999997 554432221 11110 00 00
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 78 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 120 (361)
T 3u3x_A 78 -ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKP 120 (361)
T ss_dssp -SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESC
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 11236899999999999999999999999 46888777
No 95
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.49 E-value=0.00017 Score=65.33 Aligned_cols=104 Identities=21% Similarity=0.149 Sum_probs=65.8
Q ss_pred CCccEEEEEccCh---HHHHHHHHHHcCCCceEEE-EeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEE
Q 027137 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (227)
Q Consensus 1 m~~~kVgI~G~Gr---IGr~~~r~l~~~~~~~iva-Ind~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I 76 (227)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+. ..+|- + ....+ ++ + .
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a---~~~g~-~-~~~~~-~~--~--~---- 73 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFG---EQLGV-D-SERCY-AD--Y--L---- 73 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHH---HHTTC-C-GGGBC-SS--H--H----
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHH---HHhCC-C-cceee-CC--H--H----
Confidence 4468999999999 9999999988777899998 8887 454432221 11110 0 00000 00 0 0
Q ss_pred EEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 77 ~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.++.. +..- +.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 74 ~ll~~--~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 74 SMFEQ--EARR---ADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp HHHHH--HTTC---TTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred HHHhc--cccc---CCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 00000 0000 0268999999999999999999999994 5777555
No 96
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.44 E-value=0.00015 Score=65.35 Aligned_cols=95 Identities=22% Similarity=0.288 Sum_probs=66.5
Q ss_pred CccEEEEEccC-hHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 2 GKVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 2 ~~~kVgI~G~G-rIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
|++||||+|+| .+|+.+++++.+.+++++++|.|+ +.+....+. ..+| .. ++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g----~~-----------------~~- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFG---KEYG----IP-----------------VF- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHH---HHHT----CC-----------------EE-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcC----CC-----------------eE-
Confidence 35899999999 999999999988888999999997 444332111 1111 00 00
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 -ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp -SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 112221 11236899999999998889999999999 56777666
No 97
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.41 E-value=0.00023 Score=65.01 Aligned_cols=99 Identities=24% Similarity=0.227 Sum_probs=65.3
Q ss_pred CCccEEEEEccCh---HHHHHHHHHHcCCCceEEE-EeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEE
Q 027137 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (227)
Q Consensus 1 m~~~kVgI~G~Gr---IGr~~~r~l~~~~~~~iva-Ind~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I 76 (227)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+. ..+|- + ....+
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a---~~~g~-~-~~~~~------------- 94 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASG---RELGL-D-PSRVY------------- 94 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHH---HHHTC-C-GGGBC-------------
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHH---HHcCC-C-ccccc-------------
Confidence 4468999999999 9999999988888899997 9887 454432221 11110 0 00000
Q ss_pred EEEeecCCCCCCCcc-----CCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 77 TVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 77 ~v~~~~~p~~i~W~~-----~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++- .+ .++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 95 -----~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 142 (417)
T 3v5n_A 95 -----SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKP 142 (417)
T ss_dssp -----SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESS
T ss_pred -----CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECC
Confidence 0111110 01 26899999999999999999999999 45777766
No 98
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.39 E-value=0.00069 Score=58.26 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=31.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChh
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTD 41 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~ 41 (227)
+||+|+| +|++|+.+++.+.+.++++++++.|...+++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~ 39 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS 39 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH
Confidence 4899999 5999999999998888899999988643333
No 99
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.36 E-value=0.00034 Score=61.60 Aligned_cols=96 Identities=14% Similarity=0.205 Sum_probs=61.0
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr-~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|+++||||+|+|.+|. .+++.+. .+++++++|.|+ +.+....+. ..+|. +. ++
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~--~~~~~~~~a---~~~~~-----~~---------------~~ 55 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFES--DSDNRAKFT---SLFPS-----VP---------------FA 55 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECS--CTTSCHHHH---HHSTT-----CC---------------BC
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCC--CHHHHHHHH---HhcCC-----Cc---------------cc
Confidence 6679999999999996 5677765 357999999997 333221111 11100 00 00
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 --ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 011268999999999999999999999984 5777666
No 100
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.35 E-value=0.0001 Score=67.84 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=67.4
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEE
Q 027137 3 KVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (227)
Q Consensus 3 ~~kVgI~G~----GrIGr~~~r~l~~~-~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~ 77 (227)
++||||+|+ |.+|+.+++++.+. +++++++|.|+ +.+....+. ..+|- + . ++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g~-~--~---------------~~ 76 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATI---QRLKL-S--N---------------AT 76 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHH---HHTTC-T--T---------------CE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--c---------------ce
Confidence 589999999 99999999999888 88999999997 444332211 11110 0 0 01
Q ss_pred EEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCC-----CEEEEeCC
Q 027137 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (227)
Q Consensus 78 v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~Ga-----kkVIisap 126 (227)
++ .+.+++- .+.++|+|+.||+.....+.+...+++|. |.|++--|
T Consensus 77 ~~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 77 AF--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp EE--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred ee--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 11 1222221 12378999999999988899999999994 66888666
No 101
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.35 E-value=0.00014 Score=67.96 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=67.7
Q ss_pred CccEEEEEcc----ChHHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEE
Q 027137 2 GKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (227)
Q Consensus 2 ~~~kVgI~G~----GrIGr~~~r~l~~~-~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I 76 (227)
+++||||+|+ |.+|+.+++++.+. +++++++|.|+ +.+....+. ..+|- + .+
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a---~~~g~-~--~~--------------- 94 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTI---EQLQL-K--HA--------------- 94 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHH---HHTTC-T--TC---------------
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--cc---------------
Confidence 4689999999 99999999999887 78999999997 444332211 11110 0 00
Q ss_pred EEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCC-----CEEEEeCC
Q 027137 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (227)
Q Consensus 77 ~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~Ga-----kkVIisap 126 (227)
+++ .+++++- .+.++|+|+-||+.....+.+...+++|. |.|++--|
T Consensus 95 ~~~--~d~~ell-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 95 TGF--DSLESFA-QYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp EEE--SCHHHHH-HCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred eee--CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 011 1122210 11378999999999988899999999994 67888766
No 102
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.33 E-value=0.00044 Score=60.78 Aligned_cols=94 Identities=21% Similarity=0.314 Sum_probs=64.2
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|+||||+|+ |.+|+.+++++.+. +.+++||.|+..+. +. .+.. |. ... ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~---~~---~~~~---~~--~~~---------------~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNV---GL---VDSF---FP--EAE---------------FF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC---GG---GGGT---CT--TCE---------------EE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHH---HH---HHhh---CC--CCc---------------ee--
Confidence 489999999 79999999999876 58999999984222 11 1211 11 111 11
Q ss_pred cCCCCCC-----C--ccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIP-----W--AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~-----W--~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++. | .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECC
Confidence 1111110 0 1237999999999999999999999999 46777666
No 103
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.29 E-value=0.00056 Score=59.78 Aligned_cols=93 Identities=19% Similarity=0.228 Sum_probs=61.7
Q ss_pred cEEEEEccChHHHHH-HHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~-~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
+||||+|+|.+|+.+ ++.+.+ +++++++|.|+ +.+....+. ..+|. . . ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~---~~~g~----~------~----------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYA---TENGI----G------K----------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHH---HHTTC----S------C----------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHH---HHcCC----C------c----------cc--C
Confidence 489999999999997 788877 78999999997 444432221 11110 0 0 00 1
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCC
Confidence 11111 011268999999999888888888999984 5666555
No 104
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.28 E-value=8.9e-05 Score=65.54 Aligned_cols=96 Identities=11% Similarity=0.083 Sum_probs=63.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCc--ChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~--~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
++||||+|+|.+|+.+++++ .++++++||.|+.. ..+..+-.. ..+|. .. +++
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~---~~~~~----~~---------------~~~- 56 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI---SEMNI----KP---------------KKY- 56 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH---HTTTC----CC---------------EEC-
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH---HHcCC----CC---------------ccc-
Confidence 58999999999999888887 67899999999732 122222111 00110 00 111
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 57 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 57 -NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp -SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 122222 112368999999999988899999999994 5777666
No 105
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.23 E-value=0.0006 Score=49.76 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=58.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
++||.|.|.|.+|+.+++.+.+.+..+++.+.. +.+.+..+.+. .+.. +..+ ..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~----------~~~~-----~~~d--------~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRM----------GVAT-----KQVD--------AK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTT----------TCEE-----EECC--------TT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhC----------CCcE-----EEec--------CC
Confidence 469999999999999999998875477666543 33333222100 0010 0000 01
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEe
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIis 124 (227)
+++.+.-.-.++|+||.|+|...........++.|++.+.++
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 111111001278999999998887777778888898755443
No 106
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.22 E-value=0.00067 Score=59.78 Aligned_cols=94 Identities=23% Similarity=0.181 Sum_probs=64.6
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
|+||||+|+ |.+|+.+++++.+. +.+++++.|+..+.. +.+.. |. ... ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~------~~~~~---~~--~~~---------------~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVG------IIDSI---SP--QSE---------------FF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG------GGGGT---CT--TCE---------------EE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHH------HHHhh---CC--CCc---------------EE--
Confidence 489999999 79999999999876 699999999842221 11221 11 011 11
Q ss_pred cCCCCCC--------CccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIP--------WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~--------W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.+.+++. ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 1111110 01347999999999999999999999999 46877666
No 107
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.98 E-value=0.00046 Score=61.80 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=62.2
Q ss_pred CCccEEEEEc-cChHHHH-HH----HHHHcCCCceEE---------EEeCCCcChhhhhhhhcccccccCCCCcceEEeC
Q 027137 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD 65 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~-~~----r~l~~~~~~~iv---------aInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~ 65 (227)
|+++||||+| +|.+|+. ++ +++.+.+.++++ +|.|. +++....+. ..+|. .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a---~~~~~----~----- 69 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALA---KRFNI----A----- 69 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHH---HHTTC----C-----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHH---HHhCC----C-----
Confidence 4579999999 9999997 77 777766655543 68886 444432221 11110 0
Q ss_pred CCeEEECCEEEEEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 66 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 66 ~~~l~i~gk~I~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
.++ .+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++--|
T Consensus 70 -----------~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP 115 (383)
T 3oqb_A 70 -----------RWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKP 115 (383)
T ss_dssp -----------CEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSC
T ss_pred -----------ccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCC
Confidence 000 111111 01126899999999999999999999999 45776555
No 108
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.96 E-value=0.0013 Score=57.05 Aligned_cols=134 Identities=17% Similarity=0.153 Sum_probs=78.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
.+||++.|+|.||+.+++. . ++|++++-+. . . ++ + |- .+ ..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~~-----k--------------~--------ge-l---gv--~a--~~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYDR-----I--------------S--------KD-I---PG--VV--RL 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEECS-----S--------------C--------CC-C---SS--SE--EC
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEec-----c--------------c--------cc-c---Cc--ee--eC
Confidence 3799999999999999998 3 7999988651 0 0 11 2 21 11 25
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC--CCCeEEeccCccccCCCCcEEEcCChhhHhHH
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~--d~p~~V~gVN~~~~~~~~~IVSnaSCtTn~La 160 (227)
|.+++.. +.|+|+||++...-.+...+.|++|+. ||++.+.. | |-+.-.+....-....++. -||=.--. .
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S~gaLad-~~l~~~L~~aA~~gg~~l~-vpSGAi~G-l 125 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVN-YIIISTSAFAD-EVFRERFFSELKNSPARVF-FPSGAIGG-L 125 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECCGGGGGS-HHHHHHHHHHHHTCSCEEE-CCCTTCCC-H
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcChhhhcC-HHHHHHHHHHHHHCCCeEE-ecCCcccc-h
Confidence 6777762 789999999988777778999999985 44433321 2 1110000000001112221 12211111 1
Q ss_pred HHHHHHhhhcCeeEEEEEEEeecc
Q 027137 161 PLAKVIHDKFGIVEGLMTTVHSIT 184 (227)
Q Consensus 161 p~lk~L~~~fgI~~~~~TTvha~t 184 (227)
-.++... -+|+++.++|.-+..
T Consensus 126 D~l~aa~--g~l~~V~~~t~K~P~ 147 (253)
T 1j5p_A 126 DVLSSIK--DFVKNVRIETIKPPK 147 (253)
T ss_dssp HHHHHHG--GGEEEEEEEEEECGG
T ss_pred hHHHHhc--CCccEEEEEEeCChH
Confidence 2233333 689999999998774
No 109
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.79 E-value=0.0027 Score=57.59 Aligned_cols=91 Identities=20% Similarity=0.280 Sum_probs=60.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCC-CceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~-~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||||+|+| +|+.+++++.+.+ +++++||.|+ +.+....+ ...+| ++++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~---a~~~g---------------------v~~~-- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSREL---AHAFG---------------------IPLY-- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHH---HHHTT---------------------CCEE--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHH---HHHhC---------------------CCEE--
Confidence 6899999999 6999999887765 6999999997 44432211 11111 0111
Q ss_pred cCCCCCCCccCCccEEEeecCcccC----HHhHHHHHhCCCCEEEEeCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~----~~~a~~hl~~GakkVIisap 126 (227)
.+.+++. .++|+|+=||..... .+.+...+++|. -|++--|
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 2344443 268899889987766 677888999995 5887777
No 110
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.75 E-value=0.0011 Score=60.89 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=60.7
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCC-ceEEEE-eCCCcChhhhhhhhc-ccccccCCCCcceEEeCCCe---E--EECC
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAV-NDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKT---L--LFGE 73 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~-~~ivaI-nd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~~---l--~i~g 73 (227)
++||+|.|+ |.||+.+++.+.+.++ ++++++ .+. +++.+....+ |.. ..+...+.+. + .+.+
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~--ni~~l~~~~~~f~~-------~~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR--NVKDLADAAKRTNA-------KRAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS--CHHHHHHHHHHTTC-------SEEEESCGGGHHHHHHHTTT
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC--CHHHHHHHHHHcCC-------cEEEEcChHHHHHHHHHhcc
Confidence 379999997 9999999999988775 999998 554 4554433221 111 0111101000 0 0011
Q ss_pred EEEEEE-eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 74 KPVTVF-GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 74 k~I~v~-~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
..+.++ ...+..++- ... +|+|+++++.+...+-+-..+++| |.|+.
T Consensus 75 ~~~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~Vvl 122 (388)
T 1r0k_A 75 SSVEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVAL 122 (388)
T ss_dssp CSSEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEE
T ss_pred CCcEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEE
Confidence 112222 111111111 123 899999994456777777888888 45554
No 111
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.66 E-value=0.002 Score=54.19 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=62.9
Q ss_pred ccEEEEEccChHHHHHHHHH-HcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l-~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
..||+|+|.|.+|+.+++.+ .+. +++++++-|. +++.. | -.++|.++. .-
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k~----------------------g--~~i~gv~V~--~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEKV----------------------G--RPVRGGVIE--HV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTTT----------------------T--CEETTEEEE--EG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHHH----------------------h--hhhcCCeee--cH
Confidence 46899999999999999863 344 7999999986 22211 1 123443332 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps 127 (227)
.+.+++ ..+ ++|.|+-|++.....+-+...+++|.+-++.-.|.
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 233332 134 79999999998877777788888998755444663
No 112
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.65 E-value=0.0043 Score=52.26 Aligned_cols=94 Identities=12% Similarity=0.187 Sum_probs=58.9
Q ss_pred ccEEEEEccChHHHHHHHH-HHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~-l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
..||+|+|.|.+|+.+++. .+..++++++++-|. +++.. | -.++|.++. ..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k~----------------------g--~~i~gv~V~--~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESKI----------------------G--TEVGGVPVY--NL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTTT----------------------T--CEETTEEEE--EG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHHH----------------------H--hHhcCCeee--ch
Confidence 3689999999999999995 344557999999986 33211 1 123443333 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps 127 (227)
.+.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-.|.
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 2333322 12 3 999999998777777888889999866666664
No 113
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.34 E-value=0.02 Score=44.52 Aligned_cols=85 Identities=22% Similarity=0.353 Sum_probs=57.9
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 3 ~~kVgI~G~----GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
+.+|+|+|. |++|+.+++.+.+. ++++..+|-. ++ + +.|.+ +
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vnp~------------~~---------~----------i~G~~--~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPN------------YD---------E----------IEGLK--C 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTT------------CS---------E----------ETTEE--C
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeCCC------------CC---------e----------ECCee--e
Confidence 468999999 99999999999876 4786666521 01 1 12322 2
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+ .++++++ ..+|+|+-+++.....+-....+++|++.+++..+
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 1 3455554 26899999998765556666667789988777654
No 114
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.32 E-value=0.021 Score=50.17 Aligned_cols=92 Identities=16% Similarity=0.193 Sum_probs=53.9
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCc--eEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDV--ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~--~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
|.+||+|+|+|.||..+++.+.+.+ . +|++. |. +.+.+..+.++ |. + . ..
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~-dr--~~~~~~~a~~~----G~-------------~--~----~~- 83 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGY-DI--NPESISKAVDL----GI-------------I--D----EG- 83 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEE-CS--CHHHHHHHHHT----TS-------------C--S----EE-
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEE-EC--CHHHHHHHHHC----CC-------------c--c----hh-
Confidence 3479999999999999999998775 4 65554 54 44444333211 10 0 0 01
Q ss_pred eecCCCC-CCCccCCccEEEeecCcccCHHhH---HHHHhCCCCEEEEeCCC
Q 027137 80 GVRNPEE-IPWAETGAEYVVESTGVFTDKDKA---AAHLKGGAKKVIISAPS 127 (227)
Q Consensus 80 ~~~~p~~-i~W~~~~vDiVve~tG~f~~~~~a---~~hl~~GakkVIisaps 127 (227)
..++++ . -.+.|+||.|++.....+.. ..+++.|+ +|++..|
T Consensus 84 -~~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~d~~S 129 (314)
T 3ggo_A 84 -TTSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVTDQGS 129 (314)
T ss_dssp -ESCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEEECCS
T ss_pred -cCCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEEECCC
Confidence 123333 1 13689999999876554433 23444555 7776554
No 115
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.01 E-value=0.01 Score=50.02 Aligned_cols=96 Identities=18% Similarity=0.308 Sum_probs=62.4
Q ss_pred ccEEEEEccChHHHHHHHHH-HcCCCceEEEEeCCCcChh-hhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTD-YMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l-~~~~~~~ivaInd~~~~~~-~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
+.||+|+|.|..|+.+++.+ ++..+++++|+-|. |++ . .|+ . .++|-+ |..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~k----------iG~-~------------~i~Gvp--V~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSNDL----------VGK-T------------TEDGIP--VYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTSTT----------TTC-B------------CTTCCB--EEE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchhc----------cCc-e------------eECCeE--EeC
Confidence 46899999999999988874 24457999999886 332 1 121 0 122322 222
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
-.+.+++ -.+.++|+++-|++.....+-+....++|.|.+.--+|
T Consensus 137 ~~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 137 ISTINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 1222211 12358999999999887777788888899987554555
No 116
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.88 E-value=0.016 Score=50.57 Aligned_cols=87 Identities=24% Similarity=0.217 Sum_probs=58.4
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
++||+|+|+ |++|+.+++.+.+. ++++++..+|.. . | +. +.|. +++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~-~-------------g------------~~--~~G~--~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGK-G-------------G------------TT--HLGL--PVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC-T-------------T------------CE--ETTE--EEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCc-c-------------c------------ce--eCCe--ecc--
Confidence 579999996 99999999998876 588876666620 0 0 00 1221 222
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.+.++++- +.++|+|+.+++.....+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 126899999999988888888899999986443
No 117
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.73 E-value=0.027 Score=51.28 Aligned_cols=112 Identities=16% Similarity=0.210 Sum_probs=63.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhc-ccccccCCCCcceEEeCCCeE--EECCEEE
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTL--LFGEKPV 76 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~~l--~i~gk~I 76 (227)
|.+.||+|.| +|.||+..++.+.+.++++++++.-- .+++.++...+ |.. .-+...+.... .+.. .
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~-~n~~~l~~q~~~f~p-------~~v~v~~~~~~~~~l~~-~- 70 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH-SNLELAFKIVKEFNV-------KNVAITGDVEFEDSSIN-V- 70 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES-SCHHHHHHHHHHHTC-------CEEEECSSCCCCCSSSE-E-
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc-CCHHHHHHHHHHcCC-------CEEEEccHHHHHHHHHH-H-
Confidence 5346899999 89999999999887677999999432 26666554432 322 11111111100 0000 0
Q ss_pred EEEeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 77 ~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
+..+....++- ...++|+|+.++-.+...+-.-..+++| |++.+.+
T Consensus 71 -~~G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLAN 116 (376)
T 3a06_A 71 -WKGSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLAN 116 (376)
T ss_dssp -EESTTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEECC
T ss_pred -ccCHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 11111001110 1126899999998887887777788888 5566644
No 118
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.64 E-value=0.0095 Score=53.73 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.1
Q ss_pred CccEEEEEccChHHHHHHHHHHcCC---CceEEEEeCC
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~---~~~ivaInd~ 36 (227)
+++||||+|+|.||+.+++.+.+.+ ++++++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999999999999998765 5899999985
No 119
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.45 E-value=0.0069 Score=54.04 Aligned_cols=93 Identities=19% Similarity=0.216 Sum_probs=56.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
+|||.|+|.|.+|+.+++.|.+..++.+ .|. +.+.+..+-+ +. .. +.++ ..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~---~~~--~~~~~~~~~~-------~~-~~--------~~~d--------~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYI---GDV--NNENLEKVKE-------FA-TP--------LKVD--------AS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEE---EES--CHHHHHHHTT-------TS-EE--------EECC--------TT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEE---EEc--CHHHHHHHhc-------cC-Cc--------EEEe--------cC
Confidence 5899999999999999998876544443 333 2233322210 01 01 1111 11
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
|++.+.=.-.+.|+|+.|+|.+...+-+...+++|+ -+++.+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222111001378999999999988888889999998 466654
No 120
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.35 E-value=0.077 Score=41.33 Aligned_cols=84 Identities=21% Similarity=0.237 Sum_probs=57.7
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 3 ~~kVgI~G~----GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
+.+|+|+|. |++|+.+++.+.+.+ +++..+|-. +++ +.|.+ +
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~------------~~~-------------------i~G~~--~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK------------YEE-------------------VLGRK--C 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT------------CSE-------------------ETTEE--C
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC------------CCe-------------------ECCee--c
Confidence 468999998 799999999988764 787666421 011 12322 2
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
+ .++++++ ..+|+|+-++......+-.....++|+|.++++.
T Consensus 68 y--~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 68 Y--PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp B--SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 1 3355555 2689999999887666777777789999877753
No 121
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.24 E-value=0.016 Score=48.05 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=29.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|+++||+|+|+|.+|..+++.+.+. +.+++.+.|.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA-QIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT-TCCEEEECTT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 3457999999999999999999876 4787776776
No 122
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.21 E-value=0.07 Score=41.68 Aligned_cols=86 Identities=16% Similarity=0.171 Sum_probs=57.7
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 3 ~~kVgI~G~----GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
+.+|||+|. |++|..+++.+.+.+ +++..+|-. . .++. +.|.+ +
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~-----~----------------------~g~~--i~G~~--~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPK-----V----------------------AGKT--LLGQQ--G 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSS-----S----------------------TTSE--ETTEE--C
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCc-----c----------------------cccc--cCCee--c
Confidence 357999998 899999999988764 776665421 0 0011 12322 2
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
+ .++++++ ..+|+|+-|++.....+-....+++|+|.+++..
T Consensus 61 ~--~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 Y--ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp C--SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 4566666 3789999999876555666666678999888764
No 123
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=95.07 E-value=0.064 Score=41.68 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=58.5
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 3 ~~kVgI~G~----GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
+.+|+|+|. |++|+.+++.+.+.+ +++..+| | +.. ++. +.|.+ +
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vn-p----~~~-----~~~-------------------i~G~~--~ 60 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVN-P----RFQ-----GEE-------------------LFGEE--A 60 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEEC-G----GGT-----TSE-------------------ETTEE--C
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeC-C----Ccc-----cCc-------------------CCCEE--e
Confidence 358999997 899999999988764 7866665 2 100 111 23322 2
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+ .++++++ ..+|+|+-++......+-.....+.|+|.++++.+
T Consensus 61 ~--~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 61 V--ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp B--SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred c--CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 1 3355555 26899999998866666667777889998888654
No 124
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.07 E-value=0.029 Score=47.63 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=27.3
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|.|.| +|.||+.+++.|.+.+ .+++++..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFR 36 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEEC
Confidence 46899999 8999999999998874 78877754
No 125
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.97 E-value=0.027 Score=47.43 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=28.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|+++||-|.|.|.||+.+++.|.+.+ .+++++..
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 65679999999999999999998874 78888764
No 126
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.95 E-value=0.064 Score=43.35 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=27.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 46999999 8999999999999875 78877754
No 127
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.86 E-value=0.02 Score=49.76 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=27.3
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|.++||.|.| +|.||+.+++.|.+.+ .+++++...
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 3346899999 7999999999998875 788877653
No 128
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.85 E-value=0.23 Score=41.41 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=28.3
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|++||.|.|.|.||+.+++.|.+. +.+++++...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ-GWRIIGTSRN 37 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG-TCEEEEEESC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 347999999999999999999887 4788888653
No 129
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.66 E-value=0.12 Score=48.26 Aligned_cols=103 Identities=16% Similarity=0.262 Sum_probs=68.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC--------cChhhhhhhhcccccc-cCCCCcceEEeCCCeEEECCE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~--------~~~~~~ayllkyDS~~-Gkf~~~~v~~~~~~~l~i~gk 74 (227)
.+|+|-|||.+|...++.|.+. +.++|+|.|.. .+.+.+..|+++-..+ |+.. .+ .+. ..|
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~----~~-~~~---~~~- 322 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK----EY-LNH---SST- 322 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG----GG-GGT---CSS-
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH----HH-Hhh---cCC-
Confidence 6899999999999999988877 59999999852 3556666666543322 2221 00 000 001
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEE
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIi 123 (227)
.+.. +++++ | ..++|+.+-|+ +..++.+.+...++.+|| +|+
T Consensus 323 -a~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 323 -AKYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp -CEEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred -cEEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 0111 22343 8 47899999988 777888999988888887 455
No 130
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.20 E-value=0.074 Score=46.34 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=57.4
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
..||+|+|. |+.|+.+++.+.+. ++++++.-+|.. . ++ .+.|.+ ++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~-----------~---------------g~--~i~G~~--vy-- 53 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGK-----------G---------------GM--EVLGVP--VY-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC-----------T---------------TC--EETTEE--EE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCC-----------C---------------Cc--eECCEE--ee--
Confidence 479999995 99999999988776 588765444520 0 00 022322 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.+.++++- +.++|+++.++......+.....+++|+|.+|+
T Consensus 54 ~sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 DTVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp SSHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 126899999998888888888888999986554
No 131
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.05 E-value=0.09 Score=43.18 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=27.9
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||+.+|-|.| .|.||+.+++.|.+.+..+++++..
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 4457899999 8999999999998875477777653
No 132
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.04 E-value=0.2 Score=38.25 Aligned_cols=83 Identities=18% Similarity=0.107 Sum_probs=60.6
Q ss_pred cEEEEEcc----ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 4 ~kVgI~G~----GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
-+|||+|. ++.|..+++.|.+.+ +++..||-. ++. +.|.+.
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~-------------------i~G~~~--- 49 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGE-------------------VLGKTI--- 49 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSE-------------------ETTEEC---
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCc-------------------CCCeec---
Confidence 47999994 789999999998774 798888732 222 223221
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
-.+.+++| . +|+|+-+++.....+..+...+.|+|.|+++..
T Consensus 50 -y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 -INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp -BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred -cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 14566776 3 899999999887778788888899998777644
No 133
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.03 E-value=0.061 Score=45.50 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+.+|.|.| +|.||+.+++.|.+.+ .+++++..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 46899999 8999999999999875 77777653
No 134
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=93.70 E-value=0.055 Score=45.52 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=26.8
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||-|.| +|.||+.+++.|.+.++.+++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 799999 8999999999988775688888765
No 135
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.64 E-value=0.052 Score=47.53 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=26.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|.|.+|..++..+...+.++ +.+-|.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 379999999999999988887766457 666675
No 136
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.52 E-value=0.29 Score=39.34 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=26.4
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||.|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGAR 32 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 899999 9999999999998774 88888764
No 137
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.03 E-value=0.078 Score=45.14 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=26.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC-CceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~-~~~ivaInd~ 36 (227)
|+++||+|+|+|.+|..+++.+.+.+ +.+++. .|+
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 39 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVG-YNR 39 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-ECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-EcC
Confidence 54579999999999999999887653 466554 454
No 138
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.02 E-value=0.57 Score=38.03 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=27.4
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+.+||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R 53 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVR 53 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEEC
Confidence 347899999 7999999999999874 78887764
No 139
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.93 E-value=0.076 Score=46.88 Aligned_cols=35 Identities=37% Similarity=0.490 Sum_probs=27.1
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~-~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|+ ++||+|+|.|.+|..++..+...+-++ +.+.|.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 54 469999999999999888887765447 666675
No 140
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.84 E-value=0.13 Score=39.61 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=28.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|...+|.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQR-GQNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 6667899999999999999999876 478887754
No 141
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=92.63 E-value=0.29 Score=45.51 Aligned_cols=104 Identities=18% Similarity=0.311 Sum_probs=67.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC--------c-Chhhhhhhhcccccc-cCCCCcceEEeCCCeEEEC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------I-TTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFG 72 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~--------~-~~~~~ayllkyDS~~-Gkf~~~~v~~~~~~~l~i~ 72 (227)
..+|+|-|||-+|...++.|.+. +.++|+|.|.. . +++.+..|++|-..+ |+.. .+ .++ + +
T Consensus 230 g~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~----~y-~~~-~--~ 300 (449)
T 1bgv_A 230 GKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ----DY-ADK-F--G 300 (449)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH----HH-HHH-H--T
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh----hc-ccc-c--C
Confidence 36899999999999999988776 59999988842 1 444555565553322 2222 01 000 1 1
Q ss_pred CEEEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEEe
Q 027137 73 EKPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIIS 124 (227)
Q Consensus 73 gk~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIis 124 (227)
.+.+ . ++++ | ..++|+.+-|+ +..++.+.+....+.||| +|.-
T Consensus 301 a~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~E 344 (449)
T 1bgv_A 301 VQFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIE 344 (449)
T ss_dssp CEEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEEC
T ss_pred CEEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEEe
Confidence 2222 1 3333 7 47899999988 778899999887778997 5553
No 142
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=92.46 E-value=0.095 Score=47.55 Aligned_cols=97 Identities=18% Similarity=0.196 Sum_probs=55.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhhhc-ccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
.||+|+|.|.||+.+++.+.+.+++ ..+.+.+. +.+....+.+ +.. +.. ..+.. +.++ +
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~~l~~---~~~-~~~~~-----~~~D-----~--- 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQSIKA---KGY-GEIDI-----TTVD-----A--- 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHHHHHH---TTC-CCCEE-----EECC-----T---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHHHhhh---hcC-CceEE-----EEec-----C---
Confidence 4999999999999999999988765 44555554 3333322211 110 000 00110 0010 0
Q ss_pred cCCCCCC--CccCCccEEEeecCcccCHHhHHHHHhCCCC
Q 027137 82 RNPEEIP--WAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (227)
Q Consensus 82 ~~p~~i~--W~~~~vDiVve~tG~f~~~~~a~~hl~~Gak 119 (227)
.+++++. ..+.++|+||.|+|.+....-+...+++|+.
T Consensus 63 ~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 63 DSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP 102 (405)
T ss_dssp TCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC
Confidence 1111111 1112489999999998877777888888985
No 143
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.33 E-value=0.13 Score=43.59 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=25.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
||++||+|+|.|.+|..++..+.+.+ .+++.++
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLID 33 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEE
Confidence 44579999999999999999988764 6766654
No 144
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=92.31 E-value=0.19 Score=46.41 Aligned_cols=96 Identities=19% Similarity=0.344 Sum_probs=51.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCc-------------ChhhhhhhhcccccccCCCCcceEEeCCCeE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI-------------TTDYMTYMFKYDSVHGQWKHHELKVKDDKTL 69 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~-------------~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l 69 (227)
..+|+|.|||-+|+..++.|.+. +.++|+|.|... |++.+. ++-..+|+.. .+ .
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~~~~~~G~i~d~~Gld~~~l~---~~~~~~g~i~----~~-~---- 278 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQ-GGKVCAIAEWDRNEGNYALYNENGIDFKELL---AYKEANKTLI----GF-P---- 278 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHT-TCCEEECCBCCSSSCSBCCBCSSCCCHHHHH---HHHHHHCC--------------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEecCCCccceEEECCCCCCHHHHH---HHHHhcCCcc----cC-C----
Confidence 36899999999999999999877 599999999741 223222 2111122211 01 0
Q ss_pred EECCEEEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEEeC
Q 027137 70 LFGEKPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 70 ~i~gk~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIisa 125 (227)
+.+.+ +++++ |. .++|+.+.|+ +..++.+.+..+ +|| +|+.+
T Consensus 279 --~a~~i------~~~~~-~~-~~~DIliP~A~~n~i~~~~A~~l---~ak-~VvEg 321 (421)
T 2yfq_A 279 --GAERI------TDEEF-WT-KEYDIIVPAALENVITGERAKTI---NAK-LVCEA 321 (421)
T ss_dssp --------------------------CEEECSCSSCSCHHHHTTC---CCS-EEECC
T ss_pred --CceEe------Cccch-hc-CCccEEEEcCCcCcCCcccHHHc---CCe-EEEeC
Confidence 01111 12333 64 6799999998 666777777654 675 55544
No 145
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.06 E-value=0.16 Score=38.21 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|.|.|+|++|+.+++.|.+. +.+++.+..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-GKKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEC
Confidence 5899999999999999999877 478877753
No 146
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=91.99 E-value=0.53 Score=43.85 Aligned_cols=103 Identities=14% Similarity=0.297 Sum_probs=64.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC--------cChhhhhhhhccccccc-CCCCcceEEeCCCeEEECCE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~--------~~~~~~ayllkyDS~~G-kf~~~~v~~~~~~~l~i~gk 74 (227)
.+|+|-|||.+|...++.|.+. +.++|+|.|.. .|++.+..+.++...++ +.. .-+ .+. .+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~---~~~---~~a~ 311 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEK-GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYL---KYS---KTAK 311 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGG---GTC---SSCE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhh---hcC---CCce
Confidence 5899999999999999988776 48888888853 35555554443332221 111 000 000 0111
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEE
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIi 123 (227)
.+ ++++ .|. .++|+.+=|+ +..++.+.++.-.+.+|| +|+
T Consensus 312 ~v------~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 312 YF------ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp EE------CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred Ee------CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 2333 274 6899999986 778888988877777886 455
No 147
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.94 E-value=0.16 Score=44.63 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=25.6
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+++||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45799999999999998887775543343445554
No 148
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.92 E-value=0.18 Score=44.71 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=26.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|||+|+|+||+.+++.+... ++++++.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEECC
Confidence 5899999999999999999866 488887753
No 149
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=91.90 E-value=0.27 Score=42.81 Aligned_cols=87 Identities=22% Similarity=0.273 Sum_probs=56.5
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+.|++|+|. |+.|+.+++.+.+. ++++++--+|. . .++. +.|.+ ++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~-------------~-------------~g~~--i~G~~--vy-- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPG-------------K-------------GGQN--VHGVP--VF-- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTT-------------C-------------TTCE--ETTEE--EE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCC-------------C-------------CCce--ECCEe--ee--
Confidence 467899995 99999999999876 57766443452 0 0000 12322 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.+.++++- +.++|+++.++......+.+...+++|++.+|+
T Consensus 60 ~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 22333321 126899999999888888888888999985554
No 150
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=91.88 E-value=0.14 Score=43.69 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=26.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|.|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 43 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTR 43 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEEC
Confidence 4899999 8999999999999875 77777754
No 151
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=91.88 E-value=0.17 Score=43.10 Aligned_cols=31 Identities=29% Similarity=0.301 Sum_probs=26.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++|.|.| .|.||+.+++.|.+.+ .+++++.-
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 8999999999998874 77777654
No 152
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.81 E-value=0.19 Score=38.25 Aligned_cols=37 Identities=24% Similarity=0.495 Sum_probs=29.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
+.+|.|+|+|++|+.+++.|.+. +.+++.|.. +++.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~---~~~~~ 43 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIET---SRTRV 43 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEES---CHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC---CHHHH
Confidence 36899999999999999999876 478888864 44544
No 153
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.77 E-value=0.12 Score=43.03 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=22.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~ 26 (227)
|+++||+|+|+|.+|..+++.+.+.+
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 65679999999999999999887654
No 154
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.75 E-value=0.17 Score=43.97 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=25.0
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
+++||+|+|.|.+|..++..+.+.+ .+++.+
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~ 33 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKG-QSVLAW 33 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC-CEEEEE
Confidence 3579999999999999999887764 676555
No 155
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=91.70 E-value=0.33 Score=41.24 Aligned_cols=32 Identities=38% Similarity=0.557 Sum_probs=26.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+|..|+| .||+||.+.+.+ +.+++++++.-|.
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~ 45 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDV 45 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEET
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcC
Confidence 6899999 699999998765 5557999887654
No 156
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=91.56 E-value=0.38 Score=41.96 Aligned_cols=89 Identities=17% Similarity=0.198 Sum_probs=57.5
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
+.|+.|+| .|+.|+.+++.+.+. ++++++--+|... ++. +.|. +++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~--------------------------g~~--i~G~--~vy-- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKG--------------------------GSE--VHGV--PVY-- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT--------------------------TCE--ETTE--EEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCC--------------------------Cce--ECCE--eee--
Confidence 46899999 599999999998875 5776544345200 000 1232 222
Q ss_pred cCCCCCCCccCC-ccEEEeecCcccCHHhHHHHHhCCCCEEEE-eC
Q 027137 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (227)
Q Consensus 82 ~~p~~i~W~~~~-vDiVve~tG~f~~~~~a~~hl~~GakkVIi-sa 125 (227)
.+.++++- +.+ +|+++.++......+.....+++|+|.+|+ +.
T Consensus 60 ~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 60 DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 22333321 113 899999999988888888899999986555 43
No 157
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.43 E-value=0.21 Score=44.38 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=26.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|||+|+|+||+.+++.+... ++++.+.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF-GMKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhC-CCEEEEEcC
Confidence 5899999999999999999776 488887753
No 158
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=91.42 E-value=0.74 Score=42.67 Aligned_cols=96 Identities=19% Similarity=0.345 Sum_probs=58.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCc--------ChhhhhhhhcccccccCCCCcceEEeCCCeEEECCE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--------TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~--------~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk 74 (227)
..+|+|.|||-+|+..++.|.+. +..+|+|.|... |++.+ +++-..+|+.. .+ .+ .+
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~G~i~dp~Gld~~~l---~~~~~~~g~i~----~y-~~------a~ 299 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHTGTVYNEAGIDPYDL---LRHVQEFGGVR----GY-PK------AE 299 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSSCEEECTTCCCHHHH---HHHHHHTSSST----TC-TT------SE
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCCcEEECCCCCCHHHH---HHHHHhcCCcc----cC-CC------ce
Confidence 46899999999999999998887 599999998731 33333 22222233322 00 01 11
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEEeC
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIisa 125 (227)
.+ +++++ |. .++|+++.|+ +..++.+.+... +|| +|+-+
T Consensus 300 ~i------~~~ei-~~-~~~DIlvPcA~~n~i~~~na~~l---~ak-~VvEg 339 (440)
T 3aog_A 300 PL------PAADF-WG-LPVEFLVPAALEKQITEQNAWRI---RAR-IVAEG 339 (440)
T ss_dssp EC------CHHHH-TT-CCCSEEEECSSSSCBCTTTGGGC---CCS-EEECC
T ss_pred Ec------Cchhh-hc-CCCcEEEecCCcCccchhhHHHc---CCc-EEEec
Confidence 11 12222 63 6799999997 555666766543 665 45543
No 159
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.29 E-value=0.49 Score=40.70 Aligned_cols=31 Identities=29% Similarity=0.370 Sum_probs=24.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaI 33 (227)
++||+|+|.|.+|..++..+...+.+ +++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~ 38 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLE 38 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 36999999999999998888766423 65544
No 160
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.13 E-value=0.21 Score=44.70 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 203 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYHN 203 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 48877654
No 161
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.12 E-value=0.2 Score=42.02 Aligned_cols=38 Identities=18% Similarity=0.323 Sum_probs=29.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
++||+|+|+|.+|+.+++.+.+. +.++|.+.|. +.+..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~--~~~~~ 47 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-GFRIVQVYSR--TEESA 47 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECS--SHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeC--CHHHH
Confidence 36999999999999999988766 4776777776 44443
No 162
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.05 E-value=0.21 Score=44.68 Aligned_cols=40 Identities=25% Similarity=0.427 Sum_probs=29.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
++||||+|+|.+|..+++.+.+.+ .+++.. |. +.+.+..+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~-dr--~~~~~~~l 61 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVY-DL--NVNAVQAL 61 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEE-eC--CHHHHHHH
Confidence 579999999999999999998875 776655 44 44444333
No 163
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.04 E-value=0.19 Score=43.12 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=26.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCc---eEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~---~ivaInd~ 36 (227)
|+++||+|+|+|.+|..+++.+.+.+ + +++ +.|+
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~-v~dr 37 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANG-YDPNRIC-VTNR 37 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTT-CCGGGEE-EECS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC-CCCCeEE-EEeC
Confidence 66689999999999999999998764 4 544 4455
No 164
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.00 E-value=0.2 Score=44.19 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=26.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|||+|+|+||+.+++.+... ++++++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW-GFPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEcC
Confidence 5899999999999999998766 488887754
No 165
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=90.99 E-value=0.056 Score=46.10 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=21.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|| +||+|+|+|.+|+.+++.+.+. ++++.+.|.
T Consensus 1 M~-m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 1 MS-LVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp ----CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CC-ceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 53 7999999999999998887654 666556665
No 166
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.96 E-value=0.22 Score=44.29 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEEEC
Confidence 5899999999999999999866 48877664
No 167
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.95 E-value=0.29 Score=40.79 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=27.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
+||+|+|+|.+|+.+++.+.+.+ .+ |.+.|. +.+..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~--~~~~~ 39 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HE-LIISGS--SLERS 39 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CE-EEEECS--SHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECC--CHHHH
Confidence 69999999999999999987664 44 456665 44443
No 168
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.90 E-value=1.7 Score=37.39 Aligned_cols=31 Identities=32% Similarity=0.405 Sum_probs=25.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||+|+|.|.+|..+...|. . +.++..+..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-YHDVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-CCceEEEEC
Confidence 479999999999999988887 4 467766653
No 169
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.87 E-value=0.31 Score=35.92 Aligned_cols=30 Identities=27% Similarity=0.560 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++|.|+|+|++|+.+++.|.+.+ .+++.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG-HDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 68999999999999999998764 7777664
No 170
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.85 E-value=0.39 Score=42.00 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=24.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4799999999999998888865542332334454
No 171
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.83 E-value=0.21 Score=42.41 Aligned_cols=32 Identities=31% Similarity=0.633 Sum_probs=25.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|+|.+|+.+++.+.+.+ .++. +.|.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 36 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG-YSLV-VSDR 36 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred cceEEEECchHHHHHHHHHHHhCC-CEEE-EEeC
Confidence 369999999999999999988764 6754 4454
No 172
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.67 E-value=0.22 Score=41.45 Aligned_cols=41 Identities=22% Similarity=0.429 Sum_probs=28.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCc---eEEEEeCCCcChhhhhh
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTY 45 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~---~ivaInd~~~~~~~~ay 45 (227)
|| +||+|+|+|.+|..+++.+.+.+.+ ++. +.|. +.+.+..
T Consensus 1 M~-~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~-~~~r--~~~~~~~ 44 (247)
T 3gt0_A 1 MD-KQIGFIGCGNMGMAMIGGMINKNIVSSNQII-CSDL--NTANLKN 44 (247)
T ss_dssp CC-CCEEEECCSHHHHHHHHHHHHTTSSCGGGEE-EECS--CHHHHHH
T ss_pred CC-CeEEEECccHHHHHHHHHHHhCCCCCCCeEE-EEeC--CHHHHHH
Confidence 53 7999999999999999999876421 554 4454 4444433
No 173
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.58 E-value=0.24 Score=43.31 Aligned_cols=30 Identities=20% Similarity=0.455 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-GAQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998766 47876654
No 174
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.55 E-value=0.25 Score=43.68 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGED 176 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998766 48876654
No 175
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.40 E-value=0.26 Score=41.94 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=26.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|+|.+|+.+++.+.+.+ .+++ +.|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG-VTVY-AFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 579999999999999999988764 6765 4454
No 176
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=90.38 E-value=0.26 Score=44.15 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=25.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 190 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF-GMNVLVWG 190 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEC
Confidence 5899999999999999998776 48877764
No 177
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=90.38 E-value=0.26 Score=43.60 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998766 47876554
No 178
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.33 E-value=0.3 Score=44.93 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=29.4
Q ss_pred cEEEEEccChHHHHHHHHHHc-CCCceEEEEeCCC
Q 027137 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~-~~~~~ivaInd~~ 37 (227)
.+|+|.|||+||+.+++.+.. . ++++++++|+.
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~~ 246 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDSK 246 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 589999999999999998887 5 59999999874
No 179
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=90.31 E-value=0.27 Score=43.98 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=25.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEEC
Confidence 5899999999999999998866 48877665
No 180
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=90.22 E-value=0.29 Score=43.54 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~-G~~V~~~d 195 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF-GMKTIGYD 195 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998765 48877664
No 181
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.16 E-value=0.21 Score=44.11 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=26.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|+++||+|+|.|.+|..++..+...+-.+++ +-|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~-l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVV-LFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEE-EEeC
Confidence 5568999999999999998888766422544 4454
No 182
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=90.15 E-value=0.3 Score=42.99 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=25.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|||+|+|+||+.+++.+... ++++++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF-DMDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998865 488776653
No 183
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=90.09 E-value=0.3 Score=43.67 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF-GFNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 48877654
No 184
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.06 E-value=0.3 Score=43.60 Aligned_cols=30 Identities=30% Similarity=0.426 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~~d 201 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF-GMSVRYWN 201 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEc
Confidence 5899999999999999998765 47766543
No 185
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.84 E-value=0.28 Score=43.94 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 194 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYHD 194 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEEC
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEeC
Confidence 5899999999999999998765 48866654
No 186
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=89.83 E-value=0.24 Score=43.89 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 175 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW-GATLQYHE 175 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS-CCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999988655 48877654
No 187
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=89.82 E-value=0.25 Score=43.14 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 152 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAYT 152 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEEe
Confidence 5899999999999999998765 48887764
No 188
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.77 E-value=0.34 Score=41.67 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=29.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ay 45 (227)
++||+|+|+|.+|..+++.+.+.+ .+++.. |. +.+.+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr--~~~~~~~ 45 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGA-DL--NPQACAN 45 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEE-EC--CHHHHHH
Confidence 479999999999999999998774 776655 44 4444433
No 189
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.73 E-value=0.29 Score=44.21 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~d 206 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVFD 206 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEEC
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEEC
Confidence 5899999999999999988655 48877654
No 190
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=89.70 E-value=0.32 Score=43.22 Aligned_cols=31 Identities=32% Similarity=0.468 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|||+|+|+||+.+++.+... ++++.+. |+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~-d~ 172 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCY-DV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred cEEEEECcchHHHHHHHhhccc-Cceeeec-CC
Confidence 5799999999999999988766 4887765 44
No 191
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.65 E-value=0.33 Score=42.53 Aligned_cols=30 Identities=33% Similarity=0.572 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 174 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF-GMRVVYHA 174 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 47876654
No 192
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.48 E-value=0.38 Score=40.88 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=26.0
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|+ |.+|+.+++.+.+.+ .+++.+ |.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~-~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA-HHLAAI-EI 43 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS-SEEEEE-CC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEE-EC
Confidence 369999999 999999999998764 777644 44
No 193
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.41 E-value=0.36 Score=42.22 Aligned_cols=30 Identities=37% Similarity=0.609 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 172 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL-GMNILLYD 172 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 47876654
No 194
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.40 E-value=0.42 Score=41.65 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=25.9
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|++||+|+|+|.+|..+++.+.+.+..+++..+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEe
Confidence 347999999999999999998876326666543
No 195
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.40 E-value=0.42 Score=39.89 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=25.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+||||+|+|.+|..+++.+.+.+ .+++..+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~ 49 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIGT 49 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 579999999999999999998774 6766553
No 196
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.39 E-value=0.35 Score=39.64 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=24.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++||+|+|+|.+|+.+++.+.+.+ .+++.++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~ 58 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVGS 58 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 368999999999999999988764 6766543
No 197
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=89.34 E-value=0.36 Score=42.71 Aligned_cols=30 Identities=17% Similarity=0.450 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-GAKVITYD 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 48877654
No 198
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=89.30 E-value=0.37 Score=42.26 Aligned_cols=30 Identities=37% Similarity=0.588 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 172 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM-GMKVLAYD 172 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 47876654
No 199
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.16 E-value=0.32 Score=42.23 Aligned_cols=31 Identities=35% Similarity=0.587 Sum_probs=25.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.-|||++|+|.+|..++++|.+.+ +++++-|
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G-~~V~v~d 35 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAG-YELVVWN 35 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEEEC-
T ss_pred CCcEEEEecHHHHHHHHHHHHHCC-CeEEEEe
Confidence 469999999999999999999874 8876543
No 200
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=89.16 E-value=0.55 Score=35.25 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=30.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+.++.|+|.|..|+.+++.+.+.++++++++-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 4689999999999999999987778999999885
No 201
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.02 E-value=0.33 Score=42.28 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=24.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCC---ceEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDD---VELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~---~~ivaI 33 (227)
++||+|+|+|.+|..+++.+.+.+. .+++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~ 55 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMAS 55 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEE
Confidence 5799999999999999999887641 465544
No 202
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.95 E-value=0.76 Score=44.92 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.||+|+|.|.+|..++..+.+. +++++..+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-NYPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-CCEEEEEE
Confidence 5899999999999999988876 47766553
No 203
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=88.93 E-value=0.39 Score=43.67 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999999876 48877663
No 204
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.92 E-value=0.29 Score=42.09 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=25.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++||+|+|+|.+|+.+++.+.+.+ .+++..+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEEEe
Confidence 469999999999999999988764 7766553
No 205
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=88.91 E-value=0.39 Score=43.58 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL-GWKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHC-CCEEEEEc
Confidence 5899999999999999998866 48876643
No 206
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.87 E-value=0.42 Score=42.50 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHH-cCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~-~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+. .. ++++++.+
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~~d 194 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL-GMKLVYYD 194 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHhc-CCEEEEEC
Confidence 58999999999999999987 65 47876554
No 207
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.80 E-value=0.48 Score=40.97 Aligned_cols=32 Identities=16% Similarity=0.438 Sum_probs=26.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|+|.+|..+++.+.+.+ .+++.. |.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~-dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG-FKVTVW-NR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 469999999999999999998774 676655 44
No 208
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.79 E-value=0.4 Score=43.75 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEc
Confidence 5899999999999999998866 48876553
No 209
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.77 E-value=0.38 Score=41.56 Aligned_cols=40 Identities=15% Similarity=0.412 Sum_probs=29.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
++||+|+|+|.+|..+++.+.+.+ ++++.. |. +.+....+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~-dr--~~~~~~~~ 48 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIW-NR--SPGKAAAL 48 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--SHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC--CHHHHHHH
Confidence 468999999999999999998774 776655 44 44444333
No 210
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.55 E-value=0.35 Score=42.55 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=25.4
Q ss_pred CCcc-EEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKV-KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~-kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
||+| ||+|+|.|.+|..++..+.+. +.++..++
T Consensus 12 ~m~M~kI~iIG~G~mG~~la~~L~~~-G~~V~~~~ 45 (366)
T 1evy_A 12 LLYLNKAVVFGSGAFGTALAMVLSKK-CREVCVWH 45 (366)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTT-EEEEEEEC
T ss_pred hhccCeEEEECCCHHHHHHHHHHHhC-CCEEEEEE
Confidence 3444 999999999999999988765 36665554
No 211
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.51 E-value=0.38 Score=44.47 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=26.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|.++||||+|+|.+|+.+++.+.+.+ +++... |.
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~-dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTVAIY-NR 36 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEEEEE-cC
Confidence 44579999999999999999998764 676544 44
No 212
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.50 E-value=0.35 Score=40.65 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=24.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+||+|+|+|.+|+.+++.+.+ +.+++.+ |.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~~~-~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTLVW-NR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEEEE-CS
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEEEE-eC
Confidence 489999999999999999887 4776544 44
No 213
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.49 E-value=0.67 Score=35.58 Aligned_cols=32 Identities=31% Similarity=0.445 Sum_probs=26.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
..+|.|+|+|++|+.+++.|.+.+ .+++.+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 368999999999999999998764 68777753
No 214
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.48 E-value=0.41 Score=42.13 Aligned_cols=30 Identities=33% Similarity=0.530 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d 185 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF-GVQRFLYT 185 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998765 47776665
No 215
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.45 E-value=0.39 Score=35.47 Aligned_cols=30 Identities=23% Similarity=0.490 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|.|.|.|.+|+.+++.+.+.+ .+++.+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 47999999999999999998764 6766664
No 216
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=88.43 E-value=4.4 Score=38.10 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=28.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|-|||.+|...++.|.+. +..+|+|.|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~-GakVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRF-GAKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 5899999999999999988876 5899999874
No 217
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.34 E-value=0.4 Score=42.54 Aligned_cols=29 Identities=34% Similarity=0.462 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
.+|||+|+|+||+.+++.+... ++++.+.
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~ 193 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF-DCPISYF 193 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999998765 4676554
No 218
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=88.33 E-value=0.43 Score=41.44 Aligned_cols=36 Identities=31% Similarity=0.390 Sum_probs=29.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|+++||-|.| .|.||+.+++.|.+.++.+|+++.-.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 4457999999 89999999999988756888888643
No 219
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.29 E-value=0.3 Score=43.05 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=24.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~ 36 (227)
..||+|+|.|.+|..++..+...+ + +++ +-|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~-l~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVV-LVDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEE-EECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEE-EEec
Confidence 469999999999999998887764 5 544 4454
No 220
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.28 E-value=0.48 Score=41.19 Aligned_cols=37 Identities=24% Similarity=0.239 Sum_probs=28.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
++||+|+|+|.+|+.+++.+.+.+ .+++.. |. +++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr--~~~~~ 67 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQVW-NR--TPARA 67 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEEEE-cC--CHHHH
Confidence 369999999999999999998774 776655 54 44443
No 221
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.22 E-value=0.57 Score=39.95 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=29.7
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhh
Q 027137 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT 44 (227)
Q Consensus 1 m~-~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~a 44 (227)
|| +.||+|+|.|.+|..+++.+...+ ++++.. |. +.+.+.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G-~~V~l~-d~--~~~~~~ 41 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHG-FAVTAY-DI--NTDALD 41 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--SHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC-CeEEEE-eC--CHHHHH
Confidence 55 468999999999999999988774 776554 55 444443
No 222
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.16 E-value=0.48 Score=41.79 Aligned_cols=30 Identities=30% Similarity=0.517 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d 180 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF-NMRILYYS 180 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEEC
Confidence 5899999999999999998876 47876654
No 223
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.13 E-value=5.2 Score=33.61 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.++|-|-| .|.||+.+++.|.+.+ .+++++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46899999 7999999999998874 78877754
No 224
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.12 E-value=0.55 Score=39.53 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCC-CceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~-~~~ivaInd~ 36 (227)
+||+|+|+|.+|..+++.+.+.+ ..++++ .|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeC
Confidence 48999999999999999988764 126555 454
No 225
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.10 E-value=0.42 Score=37.61 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=25.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|.|+|+|++|+.+++.|.+..+.+++++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEEC
Confidence 58999999999999999987651377777753
No 226
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.09 E-value=0.33 Score=41.00 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||+|+|+|.+|+.+++.+.+. +.+++.++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 6999999999999999998876 47776554
No 227
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=88.07 E-value=0.48 Score=40.73 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=24.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
++||+|+|+|.+|+.+++.+.+.+ .++..+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~ 59 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTVTVW 59 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEEEEE
Confidence 379999999999999999988764 676544
No 228
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.02 E-value=0.45 Score=42.04 Aligned_cols=30 Identities=37% Similarity=0.585 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~d 176 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF-GVKLYYWS 176 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998765 47876554
No 229
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.01 E-value=0.46 Score=41.49 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=26.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|+++||+|+|.|.+|..++..|.+.+ .++..+.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 65689999999999999999888764 5665554
No 230
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.93 E-value=2 Score=37.14 Aligned_cols=32 Identities=34% Similarity=0.558 Sum_probs=24.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~ 36 (227)
+||+|+|.|.+|..++..+...+.+ +++ +-|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~-L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELV-LVDR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 3899999999999999888766533 544 4454
No 231
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=87.84 E-value=0.46 Score=43.30 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 221 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF-DVHLHYTD 221 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEc
Confidence 5899999999999999998765 48877664
No 232
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.76 E-value=0.4 Score=38.95 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=26.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|||.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3899999999999999999876 478887753
No 233
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=87.67 E-value=0.79 Score=42.60 Aligned_cols=102 Identities=15% Similarity=0.329 Sum_probs=63.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC--------cChhhhhhhhccc-ccccCCCCcceEEeCCCeEEECCE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYD-SVHGQWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~--------~~~~~~ayllkyD-S~~Gkf~~~~v~~~~~~~l~i~gk 74 (227)
.+|+|-|||.+|...++.|.+. +.++|++.|.. .|.+.+..+.+.. +..|+.. + +.+ ..+.+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~--~--~~~----~~g~~ 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEF-GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA--D--YAK----EFGLV 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH--H--HHH----HHTCE
T ss_pred CEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc--c--ccc----cCCcE
Confidence 6899999999999999999887 48999988753 3455555554321 2111110 0 000 00111
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEE
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIi 123 (227)
. + ++++ .|. .++|+.+=|+ +..++.+.++.-.+.|+| +|.
T Consensus 307 ~--~----~~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k-~Ia 347 (450)
T 4fcc_A 307 Y--L----EGQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVK-AVA 347 (450)
T ss_dssp E--E----ETCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred E--e----cCcc-ccc-CCccEEeeccccccccHHHHHHHHhcCce-EEe
Confidence 1 1 1233 264 6899999886 777888999887777886 444
No 234
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.64 E-value=1.7 Score=38.53 Aligned_cols=33 Identities=30% Similarity=0.313 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 699999999999999988876653433445565
No 235
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=87.64 E-value=0.92 Score=41.85 Aligned_cols=34 Identities=24% Similarity=0.555 Sum_probs=29.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~ 37 (227)
..+|+|.|||.+|+..++.+.+. +.++|+|.|..
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~-GakVVavsD~~ 254 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDA-GAKVIGISDAN 254 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCEEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 36899999999999999988776 58999999974
No 236
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.62 E-value=0.52 Score=41.25 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=24.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|||+|+|.|.||..++..+..++-+.=+.+-|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 499999999999998888776654433344454
No 237
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.61 E-value=0.52 Score=40.21 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=28.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ay 45 (227)
+||+|+|+|.+|..+++.+.+.+ .+++.. |. +.+.+..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-d~--~~~~~~~ 41 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL--VQSAVDG 41 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--SHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCC-CeEEEE-cC--CHHHHHH
Confidence 69999999999999999998774 676655 54 4444433
No 238
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.49 E-value=0.44 Score=44.19 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=27.0
Q ss_pred CccEEEEEccChHHHHHHHHHHcCC-CceEEEEe
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRD-DVELVAVN 34 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~-~~~ivaIn 34 (227)
|++||+|+|+|.+|..++..+.+.. +.++++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3579999999999999999887663 57877764
No 239
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.48 E-value=0.44 Score=41.34 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=25.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~ 36 (227)
++||+|+|+|.+|..+++.+.+.+ . +++ +.|.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~-~~dr 56 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMA-AYDA 56 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEE-EEcC
Confidence 479999999999999999998764 6 554 4454
No 240
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.40 E-value=0.58 Score=41.41 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=25.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 4799999999999999998877654433334454
No 241
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.97 E-value=0.67 Score=39.31 Aligned_cols=31 Identities=19% Similarity=0.410 Sum_probs=25.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+||+|+|+|.+|+.+++.+.+.+ .+++.. |.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVTIW-NR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEEEE-cC
Confidence 59999999999999999998774 776644 54
No 242
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.85 E-value=1.6 Score=38.38 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 33 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDI 33 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999999988876653433344454
No 243
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.80 E-value=0.54 Score=42.16 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCce-EEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~-ivaIn 34 (227)
.+|||+|+|+||+.+++.+... +++ +.+.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~-G~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF-NPKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCcEEEEEC
Confidence 5899999999999999998765 476 76654
No 244
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.72 E-value=0.54 Score=43.97 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=30.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
|.++||||+|+|.+|..+++.+.+.+ ++|+.. |. +.+.+..+
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~-dr--~~~~~~~l 43 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVCAF-NR--TVSKVDDF 43 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--STHHHHHH
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEEEE-eC--CHHHHHHH
Confidence 34579999999999999999998774 777655 44 34444333
No 245
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.69 E-value=0.52 Score=43.39 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=27.1
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCC-CceEEEEe
Q 027137 1 MG-KVKIGINGFGRIGRLVARVILQRD-DVELVAVN 34 (227)
Q Consensus 1 m~-~~kVgI~G~GrIGr~~~r~l~~~~-~~~ivaIn 34 (227)
|+ ++||+|+|+|.+|..++..+.+.+ +.++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d 37 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVD 37 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 479999999999999999887663 57876663
No 246
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.67 E-value=3.2 Score=34.74 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|-|+|.|.+|..-++.|.+.+ .+++.|+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999988764 5655554
No 247
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.61 E-value=0.63 Score=42.76 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998766 48876654
No 248
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.58 E-value=0.73 Score=39.56 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|+|+||+.+++.+...+ +++.+.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 185 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGA 185 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999988764 6766654
No 249
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.57 E-value=4.7 Score=34.75 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=24.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
++||+|+|.|.+|..+...|.+.+ .++..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999887764 676666
No 250
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.56 E-value=0.97 Score=35.26 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=28.4
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|+.++|.|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 5557999999 7999999999998874 78877754
No 251
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=86.46 E-value=0.92 Score=41.75 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=29.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
..+|+|-|||-+|+..++.+.+. +.++|+|.|.
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~-GakVVavsD~ 250 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERL-GMRVVAVATS 250 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEET
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 36899999999999999998876 5999999987
No 252
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.38 E-value=0.45 Score=40.40 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=24.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||+|+|+|.+|..+++.+.+.+ .+++..+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEEc
Confidence 48999999999999999988764 6766553
No 253
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.30 E-value=0.58 Score=43.44 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=26.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|.+.||||+|+|.+|..+++.+.+. +++|+..+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~ 45 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-GYTVSIFN 45 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEe
Confidence 5578999999999999999999876 47766554
No 254
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=86.24 E-value=2.1 Score=39.36 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=29.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
..+|+|.|||-+|+..++.|.+. +.++|+|.|.
T Consensus 210 gk~vaVqG~GnVG~~aa~~L~e~-GakVVavsD~ 242 (421)
T 1v9l_A 210 GKTVAIQGMGNVGRWTAYWLEKM-GAKVIAVSDI 242 (421)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 36899999999999999988876 5999999987
No 255
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.22 E-value=0.7 Score=42.54 Aligned_cols=40 Identities=15% Similarity=0.357 Sum_probs=30.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
++||+|+|+|.+|..++..+.+.+ .+++.+ |. +.+.+..+
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G-~~V~~~-D~--~~~~v~~l 41 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELG-ANVRCI-DT--DRNKIEQL 41 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhcC-CEEEEE-EC--CHHHHHHH
Confidence 479999999999999999988774 787765 43 44544443
No 256
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.07 E-value=0.8 Score=39.38 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|+|+||+.+++.+...+ +++.+.+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 187 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGA 187 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEE
Confidence 58999999999999999988764 6766654
No 257
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.06 E-value=0.79 Score=38.44 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=27.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
+||+|+|+|.+|..+++.+.+.+ .+++.+ |. +.+.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~--~~~~~ 36 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SR--QQSTC 36 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-EC--CHHHH
Confidence 38999999999999999988764 676655 54 44444
No 258
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.00 E-value=0.74 Score=40.05 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=29.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
.|||++|+|.+|..++++|.+.+ ++++.- |. +++...-+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G-~~v~v~-dr--~~~~~~~l 42 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL--VQSAVDGL 42 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--SHHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCC-CeEEEE-cC--CHHHHHHH
Confidence 48999999999999999999874 776655 44 34444333
No 259
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.96 E-value=1.9 Score=37.51 Aligned_cols=127 Identities=11% Similarity=0.202 Sum_probs=70.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|+|.|.+|...++.+...+ .+++++... .+.+.++.+ .|. + ..+ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~---~~~~~~~~~----lGa-----------~-~v~----------~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN---EHKKQDALS----MGV-----------K-HFY----------TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSS---STTHHHHHH----TTC-----------S-EEE----------SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC---HHHHHHHHh----cCC-----------C-eec----------CC
Confidence 47899999999999888877664 688777532 233333321 110 1 111 12
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC-C-CCCCeEEeccCc-ccc-CCCCcEEEcCChhhHhH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-S-KDAPMFVVGVNE-NEY-KPELNIVSNASCTTNCL 159 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap-s-~d~p~~V~gVN~-~~~-~~~~~IVSnaSCtTn~L 159 (227)
++.+. .++|+||||+|.....+.+-..++.|-+ +++-+. + ...+. +|. +.+ ..+..+...-..+...+
T Consensus 228 ~~~~~---~~~D~vid~~g~~~~~~~~~~~l~~~G~-iv~~G~~~~~~~~~----~~~~~~~~~~~~~i~g~~~~~~~~~ 299 (348)
T 3two_A 228 PKQCK---EELDFIISTIPTHYDLKDYLKLLTYNGD-LALVGLPPVEVAPV----LSVFDFIHLGNRKVYGSLIGGIKET 299 (348)
T ss_dssp GGGCC---SCEEEEEECCCSCCCHHHHHTTEEEEEE-EEECCCCCGGGCCE----EEHHHHHHTCSCEEEECCSCCHHHH
T ss_pred HHHHh---cCCCEEEECCCcHHHHHHHHHHHhcCCE-EEEECCCCCCCccc----CCHHHHHhhCCeEEEEEecCCHHHH
Confidence 22222 2899999999987666666666665543 443332 2 12221 121 111 23445555544455566
Q ss_pred HHHHHHHhh
Q 027137 160 APLAKVIHD 168 (227)
Q Consensus 160 ap~lk~L~~ 168 (227)
..+++.+.+
T Consensus 300 ~~~~~l~~~ 308 (348)
T 3two_A 300 QEMVDFSIK 308 (348)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777777765
No 260
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.56 E-value=0.87 Score=37.83 Aligned_cols=30 Identities=30% Similarity=0.576 Sum_probs=24.9
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
||+|+|+|.+|..+++.+.+.+ .+++. .|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG-VEVVT-SLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEE-CCT
T ss_pred eEEEEechHHHHHHHHHHHHCC-CeEEE-eCC
Confidence 8999999999999999998764 67666 454
No 261
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=85.27 E-value=0.96 Score=36.82 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=23.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
++||+|+|+|.+|..+++.+.+.+ .+++.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 369999999999999999988764 565444
No 262
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=85.21 E-value=0.48 Score=35.93 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.||+|+|+|.+|+.+++.+.+. +++ +.+.|.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcC
Confidence 5899999999999999888764 588 666665
No 263
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.59 E-value=1.2 Score=35.61 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=25.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||+|+| .|.+|+.+++.+.+.+ .+++.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3899999 9999999999998764 7777664
No 264
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=84.33 E-value=0.96 Score=42.47 Aligned_cols=32 Identities=44% Similarity=0.741 Sum_probs=26.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~ 37 (227)
.+|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~ 174 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF-GAYVVAY-DPY 174 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEE-CCC
Confidence 6899999999999999999866 4787766 553
No 265
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=84.13 E-value=0.37 Score=40.85 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=28.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+||+|+|.|.+|..+.+.|.+. +.++++++.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT-TCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC-CCEEEEecCH
Confidence 57999999999999999999877 4788877653
No 266
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.09 E-value=2.8 Score=37.09 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=25.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+||+|+|.|.+|..++..+...+...-+.+-|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 4799999999999998888877654433445565
No 267
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=84.08 E-value=0.81 Score=38.66 Aligned_cols=30 Identities=23% Similarity=0.542 Sum_probs=24.4
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
||+|+|+|.+|+.+++.+.+.+ .++... |.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~~~-~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLIIY-DV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEEEE-CS
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 8999999999999999988764 676544 44
No 268
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.70 E-value=0.7 Score=39.27 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=25.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCC----C-ceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRD----D-VELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~----~-~~ivaIn 34 (227)
++||+|+|.|.+|..++..|.+.+ + .+++.++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 479999999999999998887651 3 5666654
No 269
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=83.28 E-value=1.3 Score=35.38 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=26.4
Q ss_pred CccEEEEEc-cChHHHHHHHHHH-cCCCceEEEEeC
Q 027137 2 GKVKIGING-FGRIGRLVARVIL-QRDDVELVAVND 35 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~-~~~~~~ivaInd 35 (227)
|+.+|.|.| .|.||+.+++.|. +. +.+++++..
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEec
Confidence 333499999 8999999999998 55 578887754
No 270
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.28 E-value=1.3 Score=36.99 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||+|+|.|.+|..++..+.+.+ .+++.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 38999999999999999988764 6766664
No 271
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.24 E-value=0.7 Score=40.17 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=20.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQR 25 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~ 25 (227)
|+++||+|+|.|.+|..++..+.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 4457999999999999999988754
No 272
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.07 E-value=1 Score=39.14 Aligned_cols=30 Identities=30% Similarity=0.450 Sum_probs=23.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCC-CceEEEE
Q 027137 4 VKIGINGFGRIGRLVARVILQRD-DVELVAV 33 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~-~~~ivaI 33 (227)
+||+|+|.|.+|..++..+...+ ..+++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 38999999999999988887653 4565554
No 273
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.05 E-value=1.3 Score=38.50 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=25.7
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|.+||+|+|.|.+|..+.+.|.+.+ .++..++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~ 44 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENG-EEVILWA 44 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEe
Confidence 4689999999999999999988764 6765554
No 274
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=82.97 E-value=2.2 Score=37.24 Aligned_cols=86 Identities=22% Similarity=0.173 Sum_probs=54.9
Q ss_pred cEEEEE-cc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEee
Q 027137 4 VKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (227)
Q Consensus 4 ~kVgI~-G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~ 81 (227)
..++|+ |+ |+.|+.+++.+.+. +++++...+|.. . ++ .+.|.+ ++
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~-G~~~v~~VnP~~------------------~--------g~--~i~G~~--vy-- 60 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY-GTNLVGGTTPGK------------------G--------GK--THLGLP--VF-- 60 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC------------------T--------TC--EETTEE--EE--
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC-CCcEEEEeCCCc------------------C--------cc--eECCee--ee--
Confidence 468888 96 99999999988776 477664445520 0 00 023322 22
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.+.++++- +.++|+++-+++.....+.....+++|+|.+|+
T Consensus 61 ~sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 61 NTVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred chHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12233321 126899999998887778788888899987444
No 275
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=82.84 E-value=2.9 Score=36.16 Aligned_cols=131 Identities=14% Similarity=0.099 Sum_probs=71.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|+|.|.+|...++.+......+++++.. +.+.+.++.++ |. + -.++. ++
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~l----Ga----~--------~~i~~--------~~ 225 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREV----GA----D--------AAVKS--------GA 225 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHT----TC----S--------EEEEC--------ST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHc----CC----C--------EEEcC--------CC
Confidence 36899999999999888776654578877743 33444333222 21 0 11110 00
Q ss_pred CCCCCC--------ccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccccCCCCcEEEcCChh
Q 027137 84 PEEIPW--------AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCT 155 (227)
Q Consensus 84 p~~i~W--------~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~~~~~~~IVSnaSCt 155 (227)
+| +..++|+||||+|...+.+.+-..++.|- ++++-+.....+.- ++...+..+..+...-.-+
T Consensus 226 ----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G-~iv~~G~~~~~~~~---~~~~~~~~~~~i~g~~~~~ 297 (345)
T 3jv7_A 226 ----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDG-HISVVGIHAGAHAK---VGFFMIPFGASVVTPYWGT 297 (345)
T ss_dssp ----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEE-EEEECSCCTTCCEE---ESTTTSCTTCEEECCCSCC
T ss_pred ----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCC-EEEEECCCCCCCCC---cCHHHHhCCCEEEEEecCC
Confidence 11 12389999999998655566666776654 34443332221221 1223333334454444444
Q ss_pred hHhHHHHHHHHhhh
Q 027137 156 TNCLAPLAKVIHDK 169 (227)
Q Consensus 156 Tn~Lap~lk~L~~~ 169 (227)
...+..+++.+.+.
T Consensus 298 ~~~~~~~~~l~~~g 311 (345)
T 3jv7_A 298 RSELMEVVALARAG 311 (345)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 45667777777653
No 276
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=83.45 E-value=0.25 Score=40.46 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=23.9
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
+.+||+|+|+|.+|+.+++.+.+.+ .++..+
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G-~~V~~~ 48 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG-YSVVFG 48 (201)
Confidence 3478999999999999999887653 554433
No 277
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=82.78 E-value=1.4 Score=36.37 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=24.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+||+|+|+|.+|..+++.+.+.+..++ .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR 32 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEECC
Confidence 389999999999999998876531454 44454
No 278
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=82.69 E-value=1.2 Score=38.19 Aligned_cols=29 Identities=31% Similarity=0.515 Sum_probs=24.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEE
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
.||+|+| +|.+|..+++.+.+.+ .++..+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~ 51 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASG-YPISIL 51 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE
Confidence 5899999 9999999999988764 565555
No 279
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.49 E-value=1.4 Score=38.14 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=25.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||+|+|.|.+|..+...|.+.+ .++..+..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 479999999999999998887764 67766654
No 280
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=82.35 E-value=6.1 Score=36.27 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=55.2
Q ss_pred ccEEEEEccC----hHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEE
Q 027137 3 KVKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (227)
Q Consensus 3 ~~kVgI~G~G----rIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v 78 (227)
+.+|+|+|.+ ++|+.+++.+.+.+...+..|| |. ++. +.|.+ +
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVn-P~-----------~~~-------------------i~G~~--~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN-IK-----------EEE-------------------VQGVK--A 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC-SS-----------CSE-------------------ETTEE--C
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEEC-CC-----------CCe-------------------ECCEe--c
Confidence 4679999965 8899999999876446766666 31 111 12322 2
Q ss_pred EeecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 79 ~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
+ .+.++++ ..+|+++-+++.....+......+.|+|.+++
T Consensus 55 y--~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 3345554 26888888888777777777777888887654
No 281
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.25 E-value=1.5 Score=39.90 Aligned_cols=39 Identities=28% Similarity=0.671 Sum_probs=30.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
.+|-|+|+|++|+.+++.|.+. +.++++|.. +++.+..+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~---d~~~v~~~ 43 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDH---DPDHIETL 43 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEEC---CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 5799999999999999999876 488888853 45554433
No 282
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.22 E-value=1.2 Score=39.66 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=25.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++||+|+|.|.+|..++..+.+..+.+++.+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 36999999999999998888654356766554
No 283
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=82.08 E-value=4.6 Score=35.03 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=49.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
-+|.|+|.|.+|...++.+...+ . +++++.. +.+.+.++.++ |. + ..++-+.-.+.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~---~~~~~~~~~~l----Ga----~--------~vi~~~~~~~~~-- 225 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGS---RKHCCDIALEY----GA----T--------DIINYKNGDIVE-- 225 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CSSEEEECC---CHHHHHHHHHH----TC----C--------EEECGGGSCHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CcEEEEECC---CHHHHHHHHHh----CC----c--------eEEcCCCcCHHH--
Confidence 36899999999999888776654 5 6777643 33333333221 11 0 111100000000
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~Ga 118 (227)
...++. ...++|+||||+|.-...+.+-..++.|-
T Consensus 226 ~v~~~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G 260 (352)
T 3fpc_A 226 QILKAT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGS 260 (352)
T ss_dssp HHHHHT-TTCCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred HHHHHc-CCCCCCEEEECCCChHHHHHHHHHHhcCC
Confidence 000000 12379999999998555566666776664
No 284
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=81.62 E-value=1.4 Score=37.42 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=27.7
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~-~~~ivaInd 35 (227)
|+.+||-|.| .|.||+.+++.|.+.+ +.+++++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 6567999999 8999999999998764 478887753
No 285
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=81.49 E-value=1.3 Score=39.27 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=28.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT 44 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~a 44 (227)
..||+|+|+|.||..+++.+.+.+ .+|++. |. +.+.+.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~-dr--~~~~~~ 45 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVFGY-NR--SRSGAK 45 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEEEE-eC--CHHHHH
Confidence 368999999999999999998774 776655 44 444443
No 286
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=81.42 E-value=1.7 Score=36.55 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.4
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|| +||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 54 7999999 8999999999999874 78877764
No 287
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=81.41 E-value=2.2 Score=34.24 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=28.9
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~-~~~ivaInd 35 (227)
|++++|-|.| .|.||+.+++.|.+.+ +.+++++..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 3457899999 8999999999999875 588887754
No 288
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=81.31 E-value=2 Score=39.40 Aligned_cols=97 Identities=22% Similarity=0.349 Sum_probs=59.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCc--------ChhhhhhhhcccccccCCCCcceEEeCCCeEEECCE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--------TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~--------~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk 74 (227)
..+|+|.|||-+|+..++.|.++.+.++|+|.|... |++.+ .+|-..+|+.. .+ .+ .+
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~----~y-~~------a~ 274 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEEL---IRYKKEHGTVV----TY-PK------GE 274 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHH---HHHHHHSSCST----TC-SS------SE
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHH---HHHHHhhCCcc----cC-CC------ce
Confidence 468999999999999999888733699999998731 33333 22222233322 00 01 11
Q ss_pred EEEEEeecCCCCCCCccCCccEEEeec-CcccCHHhHHHHHhCCCCEEEEeC
Q 027137 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 75 ~I~v~~~~~p~~i~W~~~~vDiVve~t-G~f~~~~~a~~hl~~GakkVIisa 125 (227)
.+ +++++ |. .++|+++.|+ +..++.+.+... +|| +|+-+
T Consensus 275 ~~------~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~l---~ak-~V~Eg 314 (415)
T 2tmg_A 275 RI------TNEEL-LE-LDVDILVPAALEGAIHAGNAERI---KAK-AVVEG 314 (415)
T ss_dssp EE------CHHHH-TT-CSCSEEEECSSTTSBCHHHHTTC---CCS-EEECC
T ss_pred Ec------Cchhh-hc-CCCcEEEecCCcCccCcccHHHc---CCe-EEEeC
Confidence 11 12222 53 6899999997 666777766643 675 55543
No 289
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.13 E-value=12 Score=32.11 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=26.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.++.|+|.|.+||.+++.|.+.+ .+|+.+|-.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 47999999999999999998876 777666643
No 290
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=81.03 E-value=1.5 Score=41.10 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|+|+|+||+.+++.+... ++++++. |+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~-G~~V~v~-d~ 308 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL-GATVWVT-EI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEE-eC
Confidence 5899999999999999998866 4776655 44
No 291
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.98 E-value=1.4 Score=38.69 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||+|+|+|.+|+.+++.+.+.+ ++++..+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~ 46 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTVGL 46 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEEEE
Confidence 68999999999999999998764 6765443
No 292
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=80.95 E-value=1.5 Score=38.40 Aligned_cols=40 Identities=20% Similarity=0.131 Sum_probs=29.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
+.||+|+|.|.+|..++..+... +++++.. |+ +++.+..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G~~V~l~-d~--~~~~~~~~ 45 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-GFRVKLY-DI--EPRQITGA 45 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCCEEEE-CS--CHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-CCEEEEE-eC--CHHHHHHH
Confidence 46899999999999999988876 4776554 55 55555444
No 293
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=80.91 E-value=1.7 Score=39.04 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=27.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|.|||.||+.+++.+.+. +.+|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeC
Confidence 5899999999999999998877 48888 8887
No 294
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=80.86 E-value=1.8 Score=37.53 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=26.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|+|+|.+|+.+++++.+..+++-+.+.|.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 589999999999999999876534655667776
No 295
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=80.83 E-value=1.4 Score=37.05 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=26.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|+.+||-|.| .|.||+.+++.|.+.+ .+++++.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 6667999999 8999999999998764 6766653
No 296
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.80 E-value=1.9 Score=36.75 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=25.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+.||+|+|.|.+|..++..+.+. +.+++.+ |.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~~~-d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVLV-DQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEE-EC
Confidence 35899999999999999988876 4776654 44
No 297
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=80.54 E-value=2.1 Score=38.45 Aligned_cols=36 Identities=17% Similarity=0.446 Sum_probs=29.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
.+|+|.|+|.+|+.+++.+.+.+ .+|+ +.|+ +++.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~--~~~~l 209 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV--NKAAV 209 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS--CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC--CHHHH
Confidence 58999999999999999998874 7887 7786 45433
No 298
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.31 E-value=2.1 Score=33.68 Aligned_cols=31 Identities=35% Similarity=0.486 Sum_probs=26.8
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|||.|.| .|.||+.+++.|.+++ .+++++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 3899999 8999999999999875 88888764
No 299
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=79.68 E-value=1.8 Score=40.24 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=26.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
++||+|+|.|.+|..++..+.+.++. +++.++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 47999999999999999988877457 877764
No 300
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.37 E-value=2.4 Score=33.64 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=26.2
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||.|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEe
Confidence 799999 7999999999998874 78888764
No 301
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.20 E-value=1.5 Score=37.79 Aligned_cols=32 Identities=16% Similarity=0.297 Sum_probs=24.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||+|+|.|.+|..+...|.+.+ .++..+..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG-EDVHFLLR 33 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS-CCEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 479999999999999998887764 56666654
No 302
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=79.17 E-value=1.1 Score=38.28 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=23.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++||+|+|.|.+|..+...|.+.+ .++..+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~~ 32 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSL-PHTTLIG 32 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 479999999999999888887553 4544443
No 303
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=79.06 E-value=2.8 Score=36.69 Aligned_cols=34 Identities=35% Similarity=0.380 Sum_probs=26.7
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|++||+|+|.|.+|..++..+...+.++ |.+-|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 3469999999999999888887765337 666676
No 304
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=78.92 E-value=2.1 Score=37.07 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=26.4
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~-~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|+ ++||+|+|.|.+|..++..+...+..+ |.+.|.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~ 36 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDI 36 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 53 479999999999999998887664237 455555
No 305
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.75 E-value=1.8 Score=39.88 Aligned_cols=40 Identities=23% Similarity=0.388 Sum_probs=30.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
.|||-|.|+|++|+.+++.|.+. +.+++.|.. +.+.+..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~---d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDK---DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEES---CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 47999999999999999988765 478777753 55555444
No 306
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=78.64 E-value=1.5 Score=40.90 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|+|+||+.+++.+... ++++++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~-G~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL-GARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-cCEEEEEe
Confidence 5899999999999999998765 47766654
No 307
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=78.48 E-value=1.7 Score=38.16 Aligned_cols=31 Identities=19% Similarity=0.433 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.|.|.||...++.+...+ .+++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 37899999999999998887664 68777653
No 308
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=78.43 E-value=2.2 Score=39.25 Aligned_cols=39 Identities=28% Similarity=0.361 Sum_probs=29.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
++||+|+|+|.+|..++..+.+ +.++++++ . +.+.+..+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D-~--~~~~v~~l 74 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALD-I--VQAKVDML 74 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEEC-S--CHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEe-c--CHHHhhHH
Confidence 4699999999999999887765 58877664 3 45554433
No 309
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.93 E-value=1.8 Score=39.95 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||||+|+|.+|..+++.+.+.+ +++...+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~v~d 32 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVCAFN 32 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEEEEe
Confidence 68999999999999999998764 6765443
No 310
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=77.90 E-value=1.9 Score=36.87 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=24.1
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
||+|+|.|.+|..+++.+.+.+ .++..++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 8999999999999999887654 6766664
No 311
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=77.85 E-value=2.6 Score=35.28 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=26.5
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|||-|-| +|.||+.+++.|.+++ .+|+++.-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999998874 78888753
No 312
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=77.82 E-value=2.2 Score=36.41 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=28.1
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 357999999 8999999999998875 78888764
No 313
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=77.66 E-value=2.2 Score=33.57 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=26.5
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
.+||-|.| .|.||+.+++.|.+.+.+ +++++.
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 46899999 999999999999988643 776664
No 314
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=77.65 E-value=2.3 Score=39.35 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|+|+|+||+.+++.+...+ +++++ .|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv-~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVV-TEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE-ECC
Confidence 58999999999999999998764 77554 455
No 315
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.54 E-value=1.4 Score=40.60 Aligned_cols=93 Identities=19% Similarity=0.199 Sum_probs=54.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECC--EEEEEEee
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE--KPVTVFGV 81 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~g--k~I~v~~~ 81 (227)
-+|-|.|-|+||..+++.|.+. .++.-|.. +.+...++- .+++ +.++++| ....++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~---d~~r~~~la------~~l~---------~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIER---NLQRAEKLS------EELE---------NTIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEES---CHHHHHHHH------HHCT---------TSEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEec---CHHHHHHHH------HHCC---------CceEEeccccchhhHhh
Confidence 4799999999999999988543 66666643 333333321 1112 1244433 23333333
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHh-HHHHHhCCCCEEEE
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDK-AAAHLKGGAKKVII 123 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~-a~~hl~~GakkVIi 123 (227)
. .+. ..|+++-+|+..-..=. +....+.|+||+|.
T Consensus 296 e---~i~----~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 E---NID----QVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp T---TGG----GCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred c---Cch----hhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 2 232 67999999987644322 22333579998765
No 316
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=77.48 E-value=2.3 Score=39.68 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
.+|+|+|+|+||+.+++.+...+ .+|++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 57999999999999999987764 776554
No 317
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.03 E-value=2.4 Score=37.61 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=24.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
++||+|+|.|.+|..++..+.+.+ .++...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~ 58 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLW 58 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEE
Confidence 579999999999999999888764 565444
No 318
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=76.85 E-value=1.7 Score=36.02 Aligned_cols=32 Identities=16% Similarity=0.401 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||-|.| .|.||+.+++.|.+. +.+++++..
T Consensus 5 ~m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r 37 (287)
T 3sc6_A 5 KERVIITGANGQLGKQLQEELNPE-EYDIYPFDK 37 (287)
T ss_dssp CEEEEEESTTSHHHHHHHHHSCTT-TEEEEEECT
T ss_pred eeEEEEECCCCHHHHHHHHHHHhC-CCEEEEecc
Confidence 46999999 899999999998877 478888753
No 319
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=76.81 E-value=2 Score=39.71 Aligned_cols=30 Identities=23% Similarity=0.509 Sum_probs=24.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|||||+|+|.+|..+++.+.+.+ .++...+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v~d 31 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAVFN 31 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998764 6765443
No 320
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=76.68 E-value=2.1 Score=39.91 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=26.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
..||||+|+|.+|..+++.+.+.+ ++|+..+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~d 40 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG-FTVCAYN 40 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEe
Confidence 579999999999999999998774 7776554
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=76.50 E-value=1.7 Score=38.30 Aligned_cols=92 Identities=14% Similarity=0.233 Sum_probs=52.5
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
-+|.|+| .|.+|...++.+....+.+++++.. +.+.+.++.+ .|. + ..++-+. .+ . .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~----lGa----d--------~vi~~~~-~~-~-~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKS----LGA----H--------HVIDHSK-PL-A-A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHH----TTC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHH----cCC----C--------EEEeCCC-CH-H-H
Confidence 3689999 9999998888776534578887754 3344444322 121 1 1121100 00 0 0
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~Gak 119 (227)
...++ ...++|+||||+|.....+.+...++.|-+
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGR 265 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCE
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCE
Confidence 01112 234899999999976555666677776653
No 322
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.29 E-value=2.8 Score=34.99 Aligned_cols=32 Identities=34% Similarity=0.511 Sum_probs=27.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 57999999 7999999999998874 78877754
No 323
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=76.26 E-value=1.5 Score=38.29 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=21.9
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
||+|+|.|.+|..++..+...+ +.-+.+-|.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~-l~el~L~Di 31 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG-YDDLLLIAR 31 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHhCC-CCEEEEEcC
Confidence 7999999999998887776543 322334454
No 324
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=76.07 E-value=3 Score=36.42 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=30.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
.+++|+|.|.+|+.+++++.+...++.+.|.|. +++..
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r--~~~~a 163 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV--REKAA 163 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS--SHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC--CHHHH
Confidence 589999999999999999876435777788876 44443
No 325
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=75.88 E-value=2.3 Score=35.17 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=22.9
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRD 26 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~ 26 (227)
|+++||-|.| .|.||+.+++.|.+.+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 5568999999 8999999999998765
No 326
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=75.83 E-value=6.3 Score=34.99 Aligned_cols=96 Identities=17% Similarity=0.276 Sum_probs=54.6
Q ss_pred ccEEEEEc-cChHHHHHHHH--HHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEE--EE
Q 027137 3 KVKIGING-FGRIGRLVARV--ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP--VT 77 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~--l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~--I~ 77 (227)
..||-|.| .|+.++.+++. +.++++.++|+.-+|..+- || +.+.++.+. +.
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g------------~~------------~~v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGD------------HK------------QKFYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCS------------EE------------EEEEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCC------------cc------------ceEeccCccCCce
Confidence 47899999 68888777766 3466789999998884110 00 011122221 33
Q ss_pred EEeecCCCCCCCccC-CccEEEeecCcccCHHhHHHHHh-CCCCEEEE-eC
Q 027137 78 VFGVRNPEEIPWAET-GAEYVVESTGVFTDKDKAAAHLK-GGAKKVII-SA 125 (227)
Q Consensus 78 v~~~~~p~~i~W~~~-~vDiVve~tG~f~~~~~a~~hl~-~GakkVIi-sa 125 (227)
++. +.++++= +. ++|+++.+++.....+.....+. +|+|.+|+ |.
T Consensus 66 vy~--sv~ea~~-~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 66 VFK--NMADAMR-KHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp EES--SHHHHHH-HCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eeC--CHHHHhh-cCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 432 2222210 11 57888888766544444445555 78877766 44
No 327
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=75.82 E-value=2.9 Score=32.15 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=25.4
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|+..|+|+|.|..|-..+..|.+. +++++-+-
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~-G~~V~v~E 32 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA-GHQVHLFD 32 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 468899999999999988888776 47766554
No 328
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=75.60 E-value=14 Score=31.84 Aligned_cols=86 Identities=17% Similarity=0.056 Sum_probs=48.7
Q ss_pred cEEEEEccChHHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
.||.++|.|.+|.. +++.|.+++ .++. +.|....++....|- . .| + .+....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G-~~V~-~~D~~~~~~~~~~L~---~-------------~g--i-------~v~~g~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG-FEVS-GCDAKMYPPMSTQLE---A-------------LG--I-------DVYEGF 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT-CEEE-EEESSCCTTHHHHHH---H-------------TT--C-------EEEESC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC-CEEE-EEcCCCCcHHHHHHH---h-------------CC--C-------EEECCC
Confidence 58999999999996 777777774 6654 445422222221221 0 11 1 122223
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~Ga 118 (227)
+++++.+ .++|+||-+.|.-.+........+.|.
T Consensus 58 ~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 58 DAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp CGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred CHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 4555431 257999999888666554445555555
No 329
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=75.55 E-value=2.5 Score=38.31 Aligned_cols=37 Identities=27% Similarity=0.517 Sum_probs=27.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT 44 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~a 44 (227)
|||+|+|+|.+|..++..+.+.+ .+++.+ |. +.+.+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~-d~--~~~~~~ 37 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGV-DV--SSTKID 37 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--CHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE-EC--CHHHHH
Confidence 38999999999999999888764 776665 43 444443
No 330
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.44 E-value=11 Score=33.45 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 36899999999999888877664 6 777764
No 331
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=75.35 E-value=4.9 Score=35.76 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=20.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRD 26 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~ 26 (227)
|..+||+|.| .|.||..++-.+...+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~ 48 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGA 48 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhcc
Confidence 4568999999 5999998877665443
No 332
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=75.30 E-value=2.9 Score=34.90 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=27.5
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|.| .|.||+.+++.|.+.++.+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 46899999 8999999999998765478887764
No 333
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=75.17 E-value=10 Score=33.27 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=51.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE-ee
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF-GV 81 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~-~~ 81 (227)
-+|.|+|.|.+|...++.+...+ . +++++. . +.+.+.++.++ |- + ..++-+.-.+. ..
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~-~--~~~~~~~a~~l----Ga----~--------~vi~~~~~~~~~~i 243 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILST-R--QATKRRLAEEV----GA----T--------ATVDPSAGDVVEAI 243 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC-S--CHHHHHHHHHH----TC----S--------EEECTTSSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC-C--CHHHHHHHHHc----CC----C--------EEECCCCcCHHHHH
Confidence 47899999999999888877664 6 666653 2 33333332221 21 0 11110000000 00
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
++. ..+...++|+||||+|...+.+.+...++.|-+ +++-+
T Consensus 244 ~~~--~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~-vv~~G 284 (370)
T 4ej6_A 244 AGP--VGLVPGGVDVVIECAGVAETVKQSTRLAKAGGT-VVILG 284 (370)
T ss_dssp HST--TSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEE-EEECS
T ss_pred Hhh--hhccCCCCCEEEECCCCHHHHHHHHHHhccCCE-EEEEe
Confidence 010 012223899999999965555666666666543 44433
No 334
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=74.88 E-value=3.1 Score=36.04 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=26.3
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCCCc------eEEEEe
Q 027137 1 MG-KVKIGING-FGRIGRLVARVILQRDDV------ELVAVN 34 (227)
Q Consensus 1 m~-~~kVgI~G-~GrIGr~~~r~l~~~~~~------~ivaIn 34 (227)
|+ ++||.|.| .|.||+.+++.|.+.+.+ +++.+.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 53 57999999 699999999998876533 666653
No 335
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=74.74 E-value=3.1 Score=38.04 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=63.2
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCC-ceEEEEeCCCcChhhhhhhhc-ccccccCCCCcceEEeCCCe---EE--E--CC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKT---LL--F--GE 73 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~-~~ivaInd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~~---l~--i--~g 73 (227)
.+|.|.| +|-||..-++.+.+.|+ |+++++..- .+.+.++...+ |.. .-+...+.+. |. + .|
T Consensus 10 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag-~nv~~L~~q~~~f~p-------~~v~v~d~~~~~~L~~~l~~~~ 81 (406)
T 1q0q_A 10 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCLEFSP-------RYAVMDDEASAKLLKTMLQQQG 81 (406)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHHHHCC-------SEEEESSHHHHHHHHHHHHHTT
T ss_pred eeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC-CCHHHHHHHHHHhCC-------CEEEEcCHHHHHHHHHHhhcCC
Confidence 5899999 99999999999987764 999999863 46666654432 221 1111111000 00 0 12
Q ss_pred EEEEEEeec-CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 74 KPVTVFGVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 74 k~I~v~~~~-~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
..+.++... ...++- ...++|+|+-+.-.+....-.-..+++| |++-+.+
T Consensus 82 ~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLAN 132 (406)
T 1q0q_A 82 SRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLAN 132 (406)
T ss_dssp CCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTT-CEEEECC
T ss_pred CCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCC-CeEEEec
Confidence 122333211 111110 0126899999886666666566678888 5566644
No 336
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=74.44 E-value=2.9 Score=35.63 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
-+|.|+|.|.+|...++.+...+ .+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 47999999999999888776654 6888886
No 337
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=74.26 E-value=8 Score=33.62 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=24.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|+|.|.+|...++.+... +.+++++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~ 211 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM-GAETYVISR 211 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcC
Confidence 4799999999999988877655 467777763
No 338
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=74.23 E-value=3.9 Score=36.08 Aligned_cols=30 Identities=27% Similarity=0.477 Sum_probs=26.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|.|.+|+.+++++.+. ++++++++
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d 44 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLD 44 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEe
Confidence 4899999999999999999877 58988885
No 339
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=74.00 E-value=3.6 Score=35.72 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=46.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
.||||+|.|.+|..+++.+. . +++++..+ . +++.+..+.+. +. +. .+ + .++. ..+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d-~--~~~~~~~~~~~------l~-------~~-~~--~--~i~~--~~~ 67 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQD-V--SEKALEAAREQ------IP-------EE-LL--S--KIEF--TTT 67 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEEC-S--CHHHHHHHHHH------SC-------GG-GG--G--GEEE--ESS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEE-C--CHHHHHHHHHH------HH-------HH-Hh--C--CeEE--eCC
Confidence 68999999999999999998 5 58876654 4 45555444332 01 00 00 0 1122 134
Q ss_pred CCCCCCccCCccEEEeecCcccC
Q 027137 84 PEEIPWAETGAEYVVESTGVFTD 106 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~ 106 (227)
++.+ .++|+||||......
T Consensus 68 ~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 68 LEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp CTTG----GGCSEEEECCCSCHH
T ss_pred HHHH----cCCCEEEEcCcCCHH
Confidence 5443 389999999987654
No 340
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.85 E-value=4.9 Score=34.72 Aligned_cols=135 Identities=15% Similarity=0.158 Sum_probs=66.9
Q ss_pred EEEEEccChHHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
+|.|.|.|.+|...++.+... +. +++++.. +.+.+..+.++ . + ..++-+.-.+ . +.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~---~~~~~~~~~~l-a--------------~--~v~~~~~~~~-~-~~ 223 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRAS-GAGPILVSDP---NPYRLAFARPY-A--------------D--RLVNPLEEDL-L-EV 223 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCSEEEECS---CHHHHGGGTTT-C--------------S--EEECTTTSCH-H-HH
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCCEEEEECC---CHHHHHHHHHh-H--------------H--hccCcCccCH-H-HH
Confidence 689999999999988887766 46 7777653 23333333222 1 0 0111000000 0 00
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCc-c-ccCCCCcEEEcCCh-hhHhHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNE-N-EYKPELNIVSNASC-TTNCLA 160 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~-~-~~~~~~~IVSnaSC-tTn~La 160 (227)
..++ ...++|+||||+|...+.+.+-..++.|- +++.-+.... +. .+|. . .+..+..++..-.. +...+.
T Consensus 224 ~~~~--~~~g~D~vid~~g~~~~~~~~~~~l~~~G-~iv~~g~~~~-~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 296 (343)
T 2dq4_A 224 VRRV--TGSGVEVLLEFSGNEAAIHQGLMALIPGG-EARILGIPSD-PI---RFDLAGELVMRGITAFGIAGRRLWQTWM 296 (343)
T ss_dssp HHHH--HSSCEEEEEECSCCHHHHHHHHHHEEEEE-EEEECCCCSS-CE---EECHHHHTGGGTCEEEECCSCCTTHHHH
T ss_pred HHHh--cCCCCCEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCC-Cc---eeCcHHHHHhCceEEEEeecCCCHHHHH
Confidence 0000 01379999999997444455556665543 3444332221 21 2232 1 22223445543222 455666
Q ss_pred HHHHHHhhh
Q 027137 161 PLAKVIHDK 169 (227)
Q Consensus 161 p~lk~L~~~ 169 (227)
-+++.+.+.
T Consensus 297 ~~~~l~~~g 305 (343)
T 2dq4_A 297 QGTALVYSG 305 (343)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 777777653
No 341
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=73.58 E-value=3.5 Score=37.78 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=25.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|++.+|.|.|.|.+|+.+++.+.+. +.+++.++
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~-G~~V~v~~ 33 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDS-GIKVTVAC 33 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTT-TCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-cCEEEEEE
Confidence 6557899999999999999999875 47754443
No 342
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=73.50 E-value=3.2 Score=38.40 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=26.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+.||.|+|.|.+|+.+++.|.+.++++++.++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~ 54 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVAC 54 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEE
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999999999999999987667865554
No 343
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=73.35 E-value=3.9 Score=37.50 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=25.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
..||+|+|.|.+|..++..+.+. +++++.+ |.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~-D~ 68 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAV-ES 68 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEE-EC
Confidence 35899999999999999988876 4776655 44
No 344
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=73.33 E-value=7.2 Score=34.53 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=27.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC-CcChhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP-FITTDYMT 44 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~-~~~~~~~a 44 (227)
.-||.|+|.|-+|..+++.|...+ +.-+.|.|. ..+...+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~D~Ve~sNL~ 159 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG-IGEIILIDNDQIENTNLT 159 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEECCBCCGGGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CCeEEEECCCcCcccccc
Confidence 358999999999999999998664 433334343 23444443
No 345
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=73.15 E-value=3.2 Score=34.69 Aligned_cols=30 Identities=27% Similarity=0.265 Sum_probs=24.3
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
||+|+|+|.+|+.+++.+.+.+ .+++ +.|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~-v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVW-VWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEE-EEEC
Confidence 7999999999999999998775 5654 4454
No 346
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=72.93 E-value=3.5 Score=38.09 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|+|+|.||+.+++.+... +.++++ .|.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Viv-~D~ 251 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVYV-TEI 251 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE-EeC
Confidence 5899999999999999998766 477554 444
No 347
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=72.88 E-value=3.1 Score=35.38 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=27.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~-~~~ivaInd 35 (227)
++||-|.| .|.||+.+++.|.+.+ .++++++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 47899999 8999999999998763 488888764
No 348
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=72.47 E-value=3.3 Score=37.18 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=24.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|||+|+|+|.+|..++..+.+ +.+++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEEEEE
Confidence 389999999999999888876 47877663
No 349
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=72.45 E-value=2.2 Score=37.67 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=19.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcC
Q 027137 3 KVKIGINGFGRIGRLVARVILQR 25 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~ 25 (227)
++||+|+|.|.+|..++..+.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHc
Confidence 36999999999999999888654
No 350
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=72.35 E-value=3.6 Score=35.58 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=32.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhh
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayll 47 (227)
|||-|.| .|.||+.+++.|.+.+.++++++.- ..+.+.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHh
Confidence 3899999 9999999999999876558777643 13666665555
No 351
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=72.26 E-value=3.3 Score=38.44 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=29.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
..||||+|.|.+|..++..+.+.+ ++++.. |. +.+.+..+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG-~~V~l~-D~--~~e~l~~~ 44 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG-HQVLLY-DI--SAEALTRA 44 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEE-EC--CHHHHHHH
Confidence 358999999999999999988764 776654 54 45555443
No 352
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=72.13 E-value=12 Score=31.95 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=50.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|.|.|-+|...++.+.... ...+.+.+. +.+.+.++.++ |.- ..+...+.+ . . +.+ +
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~--~~~k~~~a~~l----Ga~--~~i~~~~~~-~--~-~~~-----~- 222 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDI--SSEKLALAKSF----GAM--QTFNSSEMS-A--P-QMQ-----S- 222 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHT----TCS--EEEETTTSC-H--H-HHH-----H-
T ss_pred CEEEEECCCCcchHHHHHHHHcC-CcEEEEEec--hHHHHHHHHHc----CCe--EEEeCCCCC-H--H-HHH-----H-
Confidence 47899999999999888777664 444333343 33444333222 210 011110000 0 0 000 0
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEE
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIi 123 (227)
.+. ...++|+|+||+|...+.+.+-..++.|-+ +++
T Consensus 223 --~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~-~v~ 258 (346)
T 4a2c_A 223 --VLR-ELRFNQLILETAGVPQTVELAVEIAGPHAQ-LAL 258 (346)
T ss_dssp --HHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTCE-EEE
T ss_pred --hhc-ccCCcccccccccccchhhhhhheecCCeE-EEE
Confidence 000 113789999999976666666666665543 444
No 353
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=72.11 E-value=5.1 Score=35.78 Aligned_cols=32 Identities=19% Similarity=0.467 Sum_probs=27.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+.||+|+|-|..|+.+++++.+. +++++++.+
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d~ 55 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL-NIQVNVLDA 55 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 57999999999999999999876 488888873
No 354
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=71.98 E-value=3.1 Score=36.67 Aligned_cols=133 Identities=10% Similarity=0.127 Sum_probs=64.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|+|.|.+|...++.+... +.+++++.. +.+.+.++.+ .|. + ..++-+. +..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~---~~~~~~~a~~----lGa----~--------~vi~~~~-----~~~ 250 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTT---SEAKREAAKA----LGA----D--------EVVNSRN-----ADE 250 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES---SGGGHHHHHH----HTC----S--------EEEETTC-----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC---CHHHHHHHHH----cCC----c--------EEecccc-----HHH
Confidence 3789999999999988877665 477776653 2233333321 121 0 1111000 000
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccc-cCCCCcEEEcCChhhHhHHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLAPL 162 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~-~~~~~~IVSnaSCtTn~Lap~ 162 (227)
.+++. .++|+||||+|.....+.+-..++.|- +++.-+.... +. ..++... +..+..+...-..+...+..+
T Consensus 251 ~~~~~---~g~Dvvid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~-~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 323 (369)
T 1uuf_A 251 MAAHL---KSFDFILNTVAAPHNLDDFTTLLKRDG-TMTLVGAPAT-PH--KSPEVFNLIMKRRAIAGSMIGGIPETQEM 323 (369)
T ss_dssp HHTTT---TCEEEEEECCSSCCCHHHHHTTEEEEE-EEEECCCC----------CHHHHHTTTCEEEECCSCCHHHHHHH
T ss_pred HHHhh---cCCCEEEECCCCHHHHHHHHHHhccCC-EEEEeccCCC-Cc--cccCHHHHHhCCcEEEEeecCCHHHHHHH
Confidence 11121 389999999997655555555555443 3443332211 11 1222211 122334444333334456666
Q ss_pred HHHHhh
Q 027137 163 AKVIHD 168 (227)
Q Consensus 163 lk~L~~ 168 (227)
++.+.+
T Consensus 324 ~~l~~~ 329 (369)
T 1uuf_A 324 LDFCAE 329 (369)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666654
No 355
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=71.92 E-value=4.2 Score=37.09 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=61.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCC-ceEEEEeCCCcChhhhhhhhc-ccccccCCCCcceEEeCCCeEEECCEEEEEEe
Q 027137 4 VKIGING-FGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~-~~ivaInd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~ 80 (227)
.||.|.| +|-||..-++.+.+.|+ |+++++..-..+.+.++...+ |.. .-+...+.+...- ..+.++.
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p-------~~v~v~d~~~~~~--~~~~v~~ 92 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGV-------TNIAVADEHAAQR--VGDIPYH 92 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCC-------CCEEESCHHHHHH--HCCCSEE
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCC-------CEEEEcCHHHhhh--cCCEEEe
Confidence 5799999 99999999999987764 999999862236666654332 221 1111111100000 0011111
Q ss_pred ecC-CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 81 VRN-PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 81 ~~~-p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
..+ ..++- ...++|+|+-+.-.+....-.-..+++| |++-+.+
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLAN 136 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTG-ARLALAN 136 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHT-CEEEECC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCC-CceEEcc
Confidence 110 00110 0025899999886666666556677888 5566644
No 356
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=71.85 E-value=6.8 Score=34.18 Aligned_cols=149 Identities=8% Similarity=0.103 Sum_probs=73.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|.|.|.+|...++.+... +.+++++.. +.+.+..+.++ |. + ..++...-.+ . ..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~---~~~~~~~~~~l----Ga----~--------~vi~~~~~~~-~-~~ 248 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT-GAEVIVTSS---SREKLDRAFAL----GA----D--------HGINRLEEDW-V-ER 248 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT-TCEEEEEES---CHHHHHHHHHH----TC----S--------EEEETTTSCH-H-HH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEec---CchhHHHHHHc----CC----C--------EEEcCCcccH-H-HH
Confidence 4799999999999988887766 478887753 33343333221 11 0 1111000000 0 00
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCccc-cCCCCcEEEcCChhhHhHHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLAPL 162 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~~-~~~~~~IVSnaSCtTn~Lap~ 162 (227)
..++. ...++|+||||+|. ...+.+-..++.|-+ +++-+.... +.. .++... +..+..+...-..+...+..+
T Consensus 249 v~~~~-~g~g~D~vid~~g~-~~~~~~~~~l~~~G~-iv~~G~~~~-~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 322 (363)
T 3uog_A 249 VYALT-GDRGADHILEIAGG-AGLGQSLKAVAPDGR-ISVIGVLEG-FEV--SGPVGPLLLKSPVVQGISVGHRRALEDL 322 (363)
T ss_dssp HHHHH-TTCCEEEEEEETTS-SCHHHHHHHEEEEEE-EEEECCCSS-CEE--CCBTTHHHHTCCEEEECCCCCHHHHHHH
T ss_pred HHHHh-CCCCceEEEECCCh-HHHHHHHHHhhcCCE-EEEEecCCC-ccc--CcCHHHHHhCCcEEEEEecCCHHHHHHH
Confidence 00000 12379999999994 455666666666543 444332211 111 122211 112344554444445667777
Q ss_pred HHHHhhhcCeeEEEEEEEee
Q 027137 163 AKVIHDKFGIVEGLMTTVHS 182 (227)
Q Consensus 163 lk~L~~~fgI~~~~~TTvha 182 (227)
++.+.+. .|+. .++...+
T Consensus 323 ~~l~~~g-~l~~-~i~~~~~ 340 (363)
T 3uog_A 323 VGAVDRL-GLKP-VIDMRYK 340 (363)
T ss_dssp HHHHHHH-TCCC-CEEEEEE
T ss_pred HHHHHcC-CCcc-ceeeEEc
Confidence 7777654 3443 4443433
No 357
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=71.75 E-value=4.6 Score=34.38 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=27.2
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47899999 8999999999998874 78887754
No 358
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=71.71 E-value=4.8 Score=35.49 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=26.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
..+|+|+|.|.+|+.+++++.+. +++++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM-GYKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 35899999999999999999877 48888874
No 359
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=71.61 E-value=4.7 Score=35.44 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=25.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|+++||+|+|.|.+|..++..+...+-.+++ +-|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~-L~Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVV-LFDI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEE-EEeC
Confidence 5567999999999999988888766422644 4454
No 360
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=71.57 E-value=3.8 Score=34.75 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=27.1
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~-~~~ivaInd 35 (227)
|++|-|.| .|.||+.+++.|.+.+ +.+++++..
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 36899999 8999999999998763 578887754
No 361
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=71.19 E-value=4.5 Score=35.24 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=24.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4799999999999998888876653333334454
No 362
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=71.16 E-value=4.9 Score=36.29 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=20.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRD 26 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~ 26 (227)
++||+|+| .|.||..++-.+...+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~ 56 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGE 56 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCC
Confidence 58999999 8999999888887654
No 363
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=70.51 E-value=5.1 Score=33.51 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=26.3
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.++|-|.| .|.||+.+++.|.+.+ .+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 36899999 8999999999998874 7877765
No 364
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=70.28 E-value=5.1 Score=34.65 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=23.8
Q ss_pred EEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 5 kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 199 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG-AYPVIVSE 199 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6899999999999998887664 6 777764
No 365
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=70.25 E-value=9.3 Score=32.56 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=24.1
Q ss_pred EEEEEcc-ChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+|.|.|. |.+|...++.+...+ .+++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 6999995 999999888877664 67777764
No 366
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=70.22 E-value=18 Score=33.04 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=54.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
.+|-|+|.|++|..-++.|.+.+ .+++.|. +....+ +..+. +. +.+.+ +..+-+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~~-~~~l~--~~-------~~i~~--------------~~~~~~ 66 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIPQ-FTVWA--NE-------GMLTL--------------VEGPFD 66 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCHH-HHHHH--TT-------TSCEE--------------EESSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCHH-HHHHH--hc-------CCEEE--------------EECCCC
Confidence 68999999999999999998874 6665554 422222 22221 10 11111 001122
Q ss_pred CCCCCCccCCccEEEeecCcc-cCHHhHHHHHhCCCCEEEEeCCC
Q 027137 84 PEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIISAPS 127 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f-~~~~~a~~hl~~GakkVIisaps 127 (227)
+++++ +.|+||=|||.- .+..-+....+.|..--+++.|.
T Consensus 67 ~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 67 ETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp GGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 33443 789999999986 45554555556777422355553
No 367
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=70.10 E-value=3.2 Score=34.57 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcC-CCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~-~~~~ivaInd 35 (227)
.+||-|.| .|.||+.+++.|.+. ++.+++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 36899999 799999999999876 3477777753
No 368
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=70.03 E-value=5.6 Score=33.55 Aligned_cols=31 Identities=32% Similarity=0.460 Sum_probs=26.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 8999999999998874 78887754
No 369
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=69.98 E-value=5.4 Score=33.55 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=26.3
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 8999999999998874 78887754
No 370
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=69.73 E-value=5 Score=35.15 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=25.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|.|.+|..++..+...+.++ +.+-|.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 369999999999999988887654337 566665
No 371
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=69.53 E-value=2.3 Score=37.04 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=24.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.-||.|+|.|-+|..+++.|...+ +.=+.|-|
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aG-VG~i~lvD 67 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCG-IGKLLLFD 67 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 368999999999999999987654 43333444
No 372
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=69.34 E-value=4.7 Score=34.43 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46899999 7999999999998874 78887754
No 373
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=69.34 E-value=8.4 Score=33.70 Aligned_cols=30 Identities=20% Similarity=0.416 Sum_probs=23.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 46899999999999888776554 5 677764
No 374
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=69.16 E-value=5.2 Score=35.62 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|+|+||+.+++.+...+ .++++++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d 198 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLD 198 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 58999999999999999887764 6766554
No 375
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=68.53 E-value=4.2 Score=37.97 Aligned_cols=113 Identities=13% Similarity=0.131 Sum_probs=61.2
Q ss_pred ccEEEEEc-cChHHHHHHHHHHc---CC-CceEEEEeCCCcChhhhhhhhc-ccccccCCCCcceEEeCCC-------eE
Q 027137 3 KVKIGING-FGRIGRLVARVILQ---RD-DVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDK-------TL 69 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~---~~-~~~ivaInd~~~~~~~~ayllk-yDS~~Gkf~~~~v~~~~~~-------~l 69 (227)
+.||.|.| +|-||..-++.+.+ .| .|+++|+..- .+.+.++...+ |.. .-+...+.. .+
T Consensus 77 mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg-~Nv~lL~eQ~~ef~P-------~~v~v~d~~~~~~L~~~l 148 (488)
T 3au8_A 77 PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVN-KSVNELYEQAREFLP-------EYLCIHDKSVYEELKELV 148 (488)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEES-SCHHHHHHHHHHHCC-------SEEEESCGGGTHHHHTGG
T ss_pred ceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcC-CCHHHHHHHHHHcCC-------CEEEEcCHHHHHHHHHHh
Confidence 45799999 99999999998876 33 5999998763 46666654432 211 111111100 01
Q ss_pred EE-CCEEEEEEeec-CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeC
Q 027137 70 LF-GEKPVTVFGVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (227)
Q Consensus 70 ~i-~gk~I~v~~~~-~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisa 125 (227)
.- .|..+.++... ...++- ...++|+|+-+.-.+....-.-..+++| |++-+.+
T Consensus 149 ~~~~~~~~~v~~G~egl~e~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~IALAN 204 (488)
T 3au8_A 149 KNIKDYKPIILCGDEGMKEIC-SSNSIDKIVIGIDSFQGLYSTMYAIMNN-KIVALAN 204 (488)
T ss_dssp GGSTTCCCEEEEHHHHHHHHH-HCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEECC
T ss_pred hhhcCCCceEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCC-CcEEEec
Confidence 00 11123333211 111110 0125899998875555555555677888 5566654
No 376
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=68.22 E-value=6.2 Score=34.72 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=26.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
-||||+|.|.+|+.++..+... +++++ +.|+ +++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~-l~D~--~~~~l 42 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVK-LYDI--EPRQI 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEE-EECS--CHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEE-EEEC--CHHHH
Confidence 5899999999999998877766 47754 5565 44443
No 377
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=68.17 E-value=5.8 Score=33.33 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=27.0
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|+.++|-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 5456899999 8999999999998874 78877754
No 378
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=68.09 E-value=3.5 Score=38.54 Aligned_cols=99 Identities=16% Similarity=0.207 Sum_probs=54.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc---eEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~---~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~ 79 (227)
+.||.|+|+|-||+.+++.+.+++++ +++.+ |+......+.-. .| ++.. ...++...+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~------~g------~~~~---~~~Vdadnv--- 73 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQ------YG------VSFK---LQQITPQNY--- 73 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHH------HT------CEEE---ECCCCTTTH---
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhh------cC------Ccee---EEeccchhH---
Confidence 36899999999999999999877765 45544 542111111000 01 0000 000100000
Q ss_pred eecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 80 ~~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+...+.+ -++ + |+||.++-.+.+..-....+++|+ -.|+..
T Consensus 74 -~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 74 -LEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp -HHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred -HHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 0001111 122 3 999998877878888889999999 456543
No 379
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=67.76 E-value=5.2 Score=37.43 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=24.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|+|.||+.+++.+...+ .+++++.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999887764 6766553
No 380
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=67.55 E-value=5.6 Score=34.11 Aligned_cols=32 Identities=34% Similarity=0.512 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCC-ceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~-~~ivaInd~ 36 (227)
+||+|+|.|.+|..++..+.+.+- .+++ +.|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~-l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYV-FIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEcC
Confidence 599999999999999998876542 3544 4444
No 381
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=67.54 E-value=5.3 Score=34.85 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=25.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999988887776554443444565
No 382
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=67.53 E-value=6 Score=33.34 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=25.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++|-|-| .|.||+.+++.|.+.+ .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 4899999 8999999999998864 7888775
No 383
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=67.43 E-value=19 Score=31.07 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=51.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCce-EEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCE-EEEEEee
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK-PVTVFGV 81 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~-ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk-~I~v~~~ 81 (227)
-+|.|+|.|.+|...++.+...+ .+ ++++.. +.+.+.++.++ - . ..+.+ .++.. .-.+ .
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~---~~~~~~~a~~l-~-----~-~~~~~------~~~~~~~~~~-~- 241 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG-ACPLVITDI---DEGRLKFAKEI-C-----P-EVVTH------KVERLSAEES-A- 241 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEEES---CHHHHHHHHHH-C-----T-TCEEE------ECCSCCHHHH-H-
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHHHHh-c-----h-hcccc------cccccchHHH-H-
Confidence 36899999999999888877664 65 666532 33444333222 1 0 01111 00000 0000 0
Q ss_pred cCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEe
Q 027137 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (227)
Q Consensus 82 ~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIis 124 (227)
....++ .+..++|+||||+|...+.+.+-..++.|-+ +++-
T Consensus 242 ~~v~~~-t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~-iv~~ 282 (363)
T 3m6i_A 242 KKIVES-FGGIEPAVALECTGVESSIAAAIWAVKFGGK-VFVI 282 (363)
T ss_dssp HHHHHH-TSSCCCSEEEECSCCHHHHHHHHHHSCTTCE-EEEC
T ss_pred HHHHHH-hCCCCCCEEEECCCChHHHHHHHHHhcCCCE-EEEE
Confidence 000000 0124899999999976555666667766643 4443
No 384
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=67.41 E-value=5.4 Score=36.83 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=29.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
.+||+|+|+|.+|..++..+.+.+ .+++.+. . +.+.+..+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d-~--~~~~v~~l 47 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCLD-V--DQAKIDIL 47 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC-S--CHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEEE-C--CHHHHHHH
Confidence 479999999999999998888764 7776664 3 44444433
No 385
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=67.37 E-value=6.7 Score=33.04 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=26.7
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||-|.| .|.||+.+++.|.+.++.+++++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 799999 8999999999998875588888764
No 386
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=66.84 E-value=5.8 Score=35.26 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=54.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
..||+|+|.|.+|+.+++.|.+. .++ .|.|. +.+.+..+.+ . +. . +.++ + .
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V-~V~~R--~~~~a~~la~--~----~~--~--------~~~d-----~---~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDV-YIGDV--NNENLEKVKE--F----AT--P--------LKVD-----A---S 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEE-EEEES--CHHHHHHHTT--T----SE--E--------EECC-----T---T
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeE-EEEEC--CHHHHHHHHh--h----CC--e--------EEEe-----c---C
Confidence 36899999999999999999766 564 45555 4444433210 0 00 0 0000 0 1
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap 126 (227)
+++++.=.-.++|+|+.|++.....+-+...+++|+ .+++.+
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 111110001268999999987766666777888887 456543
No 387
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=66.80 E-value=5.7 Score=35.21 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=28.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ 43 (227)
.+|+|+|.|.+|+.+++++.....++-+.|.|. +.+..
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r--~~~~a 167 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT--DPLAT 167 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS--SHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC--CHHHH
Confidence 589999999999999998764334666777776 44443
No 388
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=66.77 E-value=5 Score=33.91 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.||+|+|.|.+|+.+++.+.+.+ .+++ +.+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~-v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVF-LWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEE-EEEC
Confidence 58999999999999999998765 5654 4444
No 389
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=66.51 E-value=6.2 Score=35.00 Aligned_cols=35 Identities=29% Similarity=0.367 Sum_probs=25.2
Q ss_pred CCccEEEEEcc-ChHHHHHHHHHHcCCCc-eEEEEeCC
Q 027137 1 MGKVKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (227)
Q Consensus 1 m~~~kVgI~G~-GrIGr~~~r~l~~~~~~-~ivaInd~ 36 (227)
|..+||+|+|. |.+|..++..+...+.. +++ +-|.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evv-LiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLC-LYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEE-EECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEE-EEeC
Confidence 34579999996 99999998887766532 444 4454
No 390
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=66.28 E-value=6.5 Score=33.28 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=27.0
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|.++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEec
Confidence 236899999 8999999999998874 78877753
No 391
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=66.24 E-value=6.7 Score=36.33 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=25.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
..||+|+|.|.+|..++..+.+. +++++..+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D 84 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-GIETFLVV 84 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEE
Confidence 36899999999999999988876 47766553
No 392
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=66.23 E-value=3.5 Score=35.99 Aligned_cols=31 Identities=16% Similarity=0.405 Sum_probs=24.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.|.|.+|...++.+...+ .+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 36899999999999888776554 67777654
No 393
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=65.83 E-value=5.4 Score=31.96 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=26.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCc-eEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~-~ivaInd 35 (227)
.++|-|.| .|.||+.+++.|.+.+.+ +++++..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 35899999 899999999999887532 7777653
No 394
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=65.83 E-value=8.9 Score=37.62 Aligned_cols=145 Identities=19% Similarity=0.279 Sum_probs=76.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcc-----c--ccccCCCCcceEEeCCCeEEECCEEE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKY-----D--SVHGQWKHHELKVKDDKTLLFGEKPV 76 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllky-----D--S~~Gkf~~~~v~~~~~~~l~i~gk~I 76 (227)
-||||+|.|.+|..++..+... +++++- -|+ +.+.+....++ + ...++.. .. .. . . ..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~l-~D~--~~~~l~~~~~~i~~~l~~~~~~~~~~-~~-----~~-~-~--~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVVA-VES--DPKQLDAAKKIITFTLEKEASRAHQN-GQ-----AS-A-K--PKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEE-ECS--SHHHHHHHHHHHHHHHHHHHHHHHTT-TC-----CC-C-C--CCE
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchhc-ccc--hHhhhhhHHHHHHHHHHHHHHhcccc-ch-----hh-h-h--hhh
Confidence 5899999999999998877766 587654 454 33333222111 1 1111111 00 00 0 0 122
Q ss_pred EEEeecCCCCCCCccCCccEEEeecCcccCHHh-----HHHHHhCCCCEEEEeCCCC----------CCCeEEec---cC
Q 027137 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDK-----AAAHLKGGAKKVIISAPSK----------DAPMFVVG---VN 138 (227)
Q Consensus 77 ~v~~~~~p~~i~W~~~~vDiVve~tG~f~~~~~-----a~~hl~~GakkVIisaps~----------d~p~~V~g---VN 138 (227)
+. ..+.+.+. ++|+||||.-.-...+. ...+.+.++ ++-|+.|. +.|--+.| .|
T Consensus 383 ~~--~~~~~~l~----~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RF--SSSTKELS----TVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EE--ESCGGGGG----SCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred cc--cCcHHHHh----hCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 22 23444443 89999999866555432 244555565 66677652 23422222 23
Q ss_pred ccccCCCCcEEEcCChhhHhHHHHHHHHhhhcC
Q 027137 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHDKFG 171 (227)
Q Consensus 139 ~~~~~~~~~IVSnaSCtTn~Lap~lk~L~~~fg 171 (227)
+-.+-+--.||..+...-..++-+..... ..|
T Consensus 455 P~~~m~LVEvi~g~~Ts~e~~~~~~~~~~-~lg 486 (742)
T 3zwc_A 455 PAHVMRLLEVIPSRYSSPTTIATVMSLSK-KIG 486 (742)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHHH-HTT
T ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHHH-HhC
Confidence 22222223588887777777777776554 455
No 395
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=65.70 E-value=7.6 Score=33.28 Aligned_cols=31 Identities=13% Similarity=0.250 Sum_probs=25.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.| .|.||...++.+...+ .+++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4689999 8999999988887664 78877754
No 396
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=65.54 E-value=13 Score=32.09 Aligned_cols=31 Identities=23% Similarity=0.240 Sum_probs=24.4
Q ss_pred cEEEEEccChHHHHH-HHHH-HcCCCce-EEEEeC
Q 027137 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~-~r~l-~~~~~~~-ivaInd 35 (227)
-+|.|+|.|.+|... ++.+ ... +.+ ++++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeC
Confidence 589999999999988 8877 544 466 877764
No 397
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=65.45 E-value=3.5 Score=33.54 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=23.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
..+|.|.|+|++|+.+++.|.+.+ . ++.|
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vi 37 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLA 37 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEE
Confidence 358999999999999999887664 5 6655
No 398
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=65.45 E-value=22 Score=30.62 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=23.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
-+|.|+|.|.+|...++.+... +.+++++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY-GAFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEc
Confidence 4789999999999988877665 46766654
No 399
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=65.35 E-value=12 Score=32.66 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=23.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999999888776553 5 676664
No 400
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=65.33 E-value=8.1 Score=33.14 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=27.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcC-CCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~-~~~~ivaInd 35 (227)
.++|-|-| .|.||+.+++.|.+. .+.+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 36899999 899999999999873 3588888764
No 401
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=65.18 E-value=5.3 Score=35.88 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=29.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
||+.||.|.|-|.+|+.+++++.+. +++++++.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~ 36 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVY 36 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEE
Confidence 6667999999999999999999887 59988885
No 402
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=65.11 E-value=6.3 Score=34.31 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=20.8
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCC
Q 027137 3 KVKIGINGF-GRIGRLVARVILQRD 26 (227)
Q Consensus 3 ~~kVgI~G~-GrIGr~~~r~l~~~~ 26 (227)
++||+|.|. |.||..++..+...+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~ 29 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGD 29 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 589999995 999999998887765
No 403
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=64.76 E-value=4.8 Score=33.46 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=25.8
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++|.|.| +|.||+.+++.|.+.+ .+++++.-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 8999999999998764 67777653
No 404
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=64.29 E-value=7.6 Score=33.66 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=26.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++|-|.| .|.||+.+++.|.+.+..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 5899999 8999999999998874378877753
No 405
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=63.73 E-value=8.4 Score=32.67 Aligned_cols=32 Identities=31% Similarity=0.598 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 36899999 8999999999998874 78887754
No 406
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=63.25 E-value=34 Score=30.85 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.||.|+|.|..|...++.|.+++ .++.+ .|.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~-~D~ 40 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTV-NDG 40 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEE-EES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEE-EeC
Confidence 58999999999999998888774 66554 443
No 407
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=63.09 E-value=9.3 Score=33.15 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 36899999 7999999999998874 78887754
No 408
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=62.98 E-value=8.1 Score=33.64 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=26.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~ 37 (227)
.+++|+|.|.+|+.+++++.+...++-+.|.|..
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 5799999999999999998763336666677764
No 409
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=62.93 E-value=9.8 Score=33.24 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=24.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.| .|.||...++.+...+ .+++++..
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~~ 216 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD-AHVTAVCS 216 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 3799999 8999999888887664 68877753
No 410
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=62.91 E-value=7.4 Score=33.18 Aligned_cols=32 Identities=9% Similarity=0.066 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.++|-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSL 41 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeC
Confidence 46899999 8999999999998874 78877754
No 411
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=62.88 E-value=6.2 Score=33.74 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=24.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.| .|.||...++.+...+ .+++++..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 173 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG-AKLIGTVS 173 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4789999 8999999888877654 68877753
No 412
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=62.83 E-value=21 Score=31.01 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999888877664 5 677764
No 413
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=62.53 E-value=9.3 Score=32.87 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
-+|.|.|.|.+|...++.+...+ .+++++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 47999999999999998887664 6877765
No 414
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=62.52 E-value=7.7 Score=34.93 Aligned_cols=31 Identities=19% Similarity=0.094 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|+|+|.+|+..++.+...+ .++++ .|.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~v-~D~ 203 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVRA-FDT 203 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEE-EcC
Confidence 58999999999999999887765 66544 454
No 415
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=62.41 E-value=21 Score=31.15 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=24.7
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|+|. |.+|...++.+... +.+++++.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS-GYIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 36999996 99999988888766 478888754
No 416
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=62.31 E-value=5.5 Score=34.80 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=23.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999998888776553 5 566664
No 417
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=62.13 E-value=8.4 Score=33.90 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 4799999999999999988877654433445555
No 418
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=61.94 E-value=9.3 Score=32.86 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=26.6
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 5899999 8999999999998874 78887754
No 419
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=61.84 E-value=6.9 Score=35.11 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=24.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
.+|+|+|+|.+|+.+++.+...+ + +++.++
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999887664 6 666655
No 420
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=61.81 E-value=7.9 Score=33.05 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=26.2
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++|-|.| .|.||+.+++.|.+.+..+++++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 6899999 8999999999998875367777754
No 421
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=61.81 E-value=8.5 Score=33.42 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.++|-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 46899999 8999999999998764 78877653
No 422
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=61.72 E-value=7.3 Score=33.48 Aligned_cols=132 Identities=14% Similarity=0.151 Sum_probs=69.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|.|.|.+|...++.+...+ .+++++.. +.+.+.++.++ |. + ..++ .++
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga----~--------~~i~--------~~~ 219 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG-LRVAAVDI---DDAKLNLARRL----GA----E--------VAVN--------ARD 219 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHHT----TC----S--------EEEE--------TTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHHHc----CC----C--------EEEe--------CCC
Confidence 36899999999999888887664 68888753 33444333221 21 1 1111 011
Q ss_pred CC---CCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCc-cccCCCCcEEEcCChhhHhH
Q 027137 84 PE---EIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNE-NEYKPELNIVSNASCTTNCL 159 (227)
Q Consensus 84 p~---~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~-~~~~~~~~IVSnaSCtTn~L 159 (227)
++ .+.-...++|+||||+|.....+.+-..++.|- ++++-+.... +. .++. ..+..+..+......+...+
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~-~~---~~~~~~~~~~~~~i~g~~~~~~~~~ 294 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGG-TIALNGLPPG-DF---GTPIFDVVLKGITIRGSIVGTRSDL 294 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEE-EEEECSCCSS-EE---EEEHHHHHHTTCEEEECCSCCHHHH
T ss_pred cCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCC-EEEEeCCCCC-CC---CCCHHHHHhCCeEEEEEecCCHHHH
Confidence 00 000001278999999987656666666666554 2444332221 11 1111 11122344555544555667
Q ss_pred HHHHHHHhh
Q 027137 160 APLAKVIHD 168 (227)
Q Consensus 160 ap~lk~L~~ 168 (227)
.-+++.+.+
T Consensus 295 ~~~~~l~~~ 303 (340)
T 3s2e_A 295 QESLDFAAH 303 (340)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 777777765
No 423
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=61.58 E-value=16 Score=31.79 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=23.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|.|.|.+|...++.+...+ . +++++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG-ASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999888777664 6 677664
No 424
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=61.55 E-value=7.3 Score=36.80 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcC-----CCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQR-----DDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~-----~~~~ivaInd 35 (227)
.||||+|+|.+|..+++.|.+. .+++++.-.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 5899999999999999999865 1467654333
No 425
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=60.75 E-value=8.8 Score=34.11 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.+|+|+|+|++|+..++.+...+ .+| .+.|.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V-~~~d~ 203 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AVV-MATDV 203 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEE-EEEeC
Confidence 58999999999999999887665 674 44554
No 426
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=60.25 E-value=9.5 Score=33.36 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
++||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999988887765554433444565
No 427
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=60.06 E-value=11 Score=34.02 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=28.1
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 4 ~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
-+|.|.|. |.+|...++.+... +.+++++.. +.+.+.++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~---~~~~~~~~ 269 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG-GANPICVVS---SPQKAEIC 269 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCeEEEEEC---CHHHHHHH
Confidence 36999995 99999988887766 478777753 34444444
No 428
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=59.91 E-value=7.2 Score=35.27 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.||+|+|+|++|+..++.+...+ .+++ +.|.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~ 215 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKTT-GYDV 215 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 58999999999999999887664 6654 4555
No 429
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=59.77 E-value=10 Score=32.76 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=24.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 389999999999999888876653423444554
No 430
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=59.75 E-value=17 Score=31.58 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=23.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999888776554 5 677664
No 431
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=59.74 E-value=9 Score=33.09 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=50.6
Q ss_pred cEEEEE-ccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGIN-GFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~-G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
-+|.|. |.|.+|...++.+...+ .+++++.. +.+.+.++.++ |. + ..++.+. .+ . .
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga----~--------~vi~~~~-~~-~-~ 208 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG-LRVITTAS---RNETIEWTKKM----GA----D--------IVLNHKE-SL-L-N 208 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEECC---SHHHHHHHHHH----TC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHHhc----CC----c--------EEEECCc-cH-H-H
Confidence 468999 59999999988887664 68888754 34444444321 21 1 1111100 00 0 0
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCC
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~Ga 118 (227)
...++ ...++|+||||+|.....+.+-..++.|-
T Consensus 209 ~~~~~--~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G 242 (346)
T 3fbg_A 209 QFKTQ--GIELVDYVFCTFNTDMYYDDMIQLVKPRG 242 (346)
T ss_dssp HHHHH--TCCCEEEEEESSCHHHHHHHHHHHEEEEE
T ss_pred HHHHh--CCCCccEEEECCCchHHHHHHHHHhccCC
Confidence 00111 12379999999997555455556666554
No 432
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=59.73 E-value=12 Score=30.14 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=28.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+.|+.|+|.|--||.+++.+.+ .++++++.-|.
T Consensus 12 ~k~v~IiGAGg~g~~v~~~l~~-~~~~~vgfiDd 44 (220)
T 4ea9_A 12 IGGVVIIGGGGHAKVVIESLRA-CGETVAAIVDA 44 (220)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECS
T ss_pred CCCEEEEcCCHHHHHHHHHHHh-CCCEEEEEEeC
Confidence 3589999999999999999887 46899888775
No 433
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=59.71 E-value=10 Score=33.47 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|+|+|.|.||+.+++.+...+ .+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999888765 6766554
No 434
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=59.55 E-value=7.7 Score=32.40 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=24.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++|-|-| .|.||+.+++.|.+.+ .++++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 4899999 8999999999998875 6666654
No 435
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=59.49 E-value=8.9 Score=33.15 Aligned_cols=32 Identities=41% Similarity=0.652 Sum_probs=23.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaInd~ 36 (227)
+||+|+|.|.+|..++..+...+.. +++.+ |.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~-D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLI-DV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE-eC
Confidence 3899999999999998888765422 55444 44
No 436
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=59.11 E-value=12 Score=31.50 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=26.8
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|-| .|.||+.+++.|.+.+ .+++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 46899999 8999999999998874 78777653
No 437
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=59.07 E-value=11 Score=34.63 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=27.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++||.|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 46999999 8999999999998874 78887764
No 438
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=58.93 E-value=9.1 Score=32.54 Aligned_cols=31 Identities=35% Similarity=0.513 Sum_probs=26.1
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||-|-| .|.||+.+++.|.+.++.+++++..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 799999 8999999999998764578887753
No 439
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=58.81 E-value=23 Score=30.78 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=23.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
-+|.|+|.|.+|...++.+...+ . +++++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 37999999999999888877664 5 677764
No 440
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=58.38 E-value=12 Score=32.30 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=26.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 8999999999998874 78887754
No 441
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=58.25 E-value=12 Score=31.66 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 46899999 7999999999998774 78877754
No 442
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=58.00 E-value=8.4 Score=32.54 Aligned_cols=34 Identities=18% Similarity=0.375 Sum_probs=26.5
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCC------ceEEEEeC
Q 027137 2 GKVKIGING-FGRIGRLVARVILQRDD------VELVAVND 35 (227)
Q Consensus 2 ~~~kVgI~G-~GrIGr~~~r~l~~~~~------~~ivaInd 35 (227)
+.++|-|-| .|.||+.+++.|.+.+. .+++++..
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 346899999 89999999999987642 56666643
No 443
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=57.95 E-value=11 Score=31.16 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=26.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+||-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 3899999 7999999999998874 78877753
No 444
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=57.82 E-value=12 Score=31.36 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.+||-|-| .|.||+.+++.|.+.+ .+++++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 37899999 8999999999998874 78888764
No 445
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=57.75 E-value=12 Score=32.10 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=24.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaI 33 (227)
|||.|+|.|..|-..+..|.+. +++++-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEE
Confidence 6999999999999988888766 4776655
No 446
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=57.70 E-value=10 Score=33.00 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=24.2
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCC-ceEEEE
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDD-VELVAV 33 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~-~~ivaI 33 (227)
++||+|.| .|.+|..++..|.+.+. .+++.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 47999999 89999999988876642 355554
No 447
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=57.67 E-value=9.5 Score=30.33 Aligned_cols=33 Identities=21% Similarity=0.086 Sum_probs=23.7
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 2 ~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||.|+.|+|.|-.||.+++.+...+ +++++.-|
T Consensus 2 ~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~D 34 (194)
T 3bfp_A 2 RTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLD 34 (194)
T ss_dssp CCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEe
Confidence 3458999999999999999876543 77776655
No 448
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=57.04 E-value=17 Score=30.81 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=24.3
Q ss_pred EEEEEcc-ChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+|.|.|. |.+|...++.+...+ .+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeC
Confidence 4899995 999999888887664 68888764
No 449
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=56.78 E-value=4.6 Score=33.14 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=26.4
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
|| .+|-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 1 M~-~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 1 ML-NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp CE-EEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred CC-ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 54 5899999 7999999999988764 77766643
No 450
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=56.70 E-value=11 Score=32.79 Aligned_cols=22 Identities=27% Similarity=0.536 Sum_probs=19.2
Q ss_pred cEEEEEc-cChHHHHHHHHHHcC
Q 027137 4 VKIGING-FGRIGRLVARVILQR 25 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~ 25 (227)
+||+|+| .|.||..++..+..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 4999999 999999998888654
No 451
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=56.48 E-value=13 Score=33.42 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=25.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.||+|+|-|.+||.+++++.+. +++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM-GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998876 48887774
No 452
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=56.43 E-value=6.4 Score=34.61 Aligned_cols=139 Identities=12% Similarity=0.158 Sum_probs=68.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCE---EEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFG 80 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk---~I~v~~ 80 (227)
-+|.|+|.|.+|...++.+...+-.+++++.. +.+.+.++.++ |- + ..++-+ .-.+ .
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~l----Ga----~--------~vi~~~~~~~~~~-~ 256 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEI----GA----D--------LTLNRRETSVEER-R 256 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHT----TC----S--------EEEETTTSCHHHH-H
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHc----CC----c--------EEEeccccCcchH-H
Confidence 36999999999999888877663247877753 23444333221 21 0 011100 0000 0
Q ss_pred ecCCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeccCcc--ccCCCCcEEEcCChhhH
Q 027137 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEN--EYKPELNIVSNASCTTN 157 (227)
Q Consensus 81 ~~~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~-d~p~~V~gVN~~--~~~~~~~IVSnaSCtTn 157 (227)
+...++. ...++|+||||+|.....+.+...++.|- +++.-+... ..+. .++.. .+..+..++..-..+..
T Consensus 257 -~~v~~~~-~g~g~Dvvid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~ 330 (380)
T 1vj0_A 257 -KAIMDIT-HGRGADFILEATGDSRALLEGSELLRRGG-FYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTS 330 (380)
T ss_dssp -HHHHHHT-TTSCEEEEEECSSCTTHHHHHHHHEEEEE-EEEECCCCSCCCCE---EECHHHHTTTTTCEEEECCCCCHH
T ss_pred -HHHHHHh-CCCCCcEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCCCCCe---eEchHHHHHhCCeEEEEeecCCHH
Confidence 0000000 11379999999996545555666666554 244333222 1121 12222 22233445544333455
Q ss_pred hHHHHHHHHhh
Q 027137 158 CLAPLAKVIHD 168 (227)
Q Consensus 158 ~Lap~lk~L~~ 168 (227)
.+.-+++.+.+
T Consensus 331 ~~~~~~~l~~~ 341 (380)
T 1vj0_A 331 HFVKTVSITSR 341 (380)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 66667777765
No 453
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=56.38 E-value=11 Score=34.24 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
.||+|+|+|++|...++.+...+ .+++ +.|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVVS-ATDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 68999999999999999887664 6654 5565
No 454
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=56.03 E-value=13 Score=31.26 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=25.5
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+|-|-| .|.||+.+++.|.+.+ .+++++.
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~ 40 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKG-YAVNTTV 40 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 5899999 9999999999998874 7877654
No 455
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=55.97 E-value=12 Score=34.38 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=26.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.+||+|+|+|.+|..++..+.+. +.+++..+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D 38 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVD 38 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 48999999999999999988877 47877765
No 456
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=55.65 E-value=14 Score=32.06 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=26.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.||+|+|-|..|+.+++++.+.+ ++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G-~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG-FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999988764 78877753
No 457
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=55.23 E-value=12 Score=31.56 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=25.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
++||+|+|-| .|+.+++++.+. +++++.+.
T Consensus 2 ~m~Ililg~g-~~~~l~~a~~~~-G~~v~~~~ 31 (334)
T 2r85_A 2 KVRIATYASH-SALQILKGAKDE-GFETIAFG 31 (334)
T ss_dssp CSEEEEESST-THHHHHHHHHHT-TCCEEEES
T ss_pred ceEEEEECCh-hHHHHHHHHHhC-CCEEEEEE
Confidence 5799999999 999999998877 48877775
No 458
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=55.21 E-value=9.1 Score=32.91 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=23.9
Q ss_pred cEEEEEccC-hHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFG-RIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~G-rIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.|.| .||...++.+...+ .+++++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN-FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeC
Confidence 478999965 99999888776654 68877753
No 459
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=55.16 E-value=45 Score=30.50 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=24.2
Q ss_pred cEEEEEccChHHHH-HHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~-~~r~l~~~~~~~ivaInd~ 36 (227)
.||-++|.|.+|.. +++.|.+.+ .++. +.|.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V~-~~D~ 54 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQIS-GSDL 54 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeEE-EEEC
Confidence 58999999999996 788888774 6654 4564
No 460
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=54.45 E-value=12 Score=34.75 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=26.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.++.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 4789999999999999999876 478777753
No 461
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=54.32 E-value=12 Score=31.60 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=25.8
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
.++|-|.| .|.||+.+++.|.+.+ .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 46899999 7999999999999874 78777754
No 462
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=54.06 E-value=13 Score=35.18 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=27.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+++|-|.| .|.||+.+++.|.+.++.+|+++..
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46899999 8999999999998875578887764
No 463
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=53.67 E-value=15 Score=31.20 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=26.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
++|-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999998874 78777753
No 464
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=53.56 E-value=35 Score=29.14 Aligned_cols=137 Identities=13% Similarity=0.191 Sum_probs=67.2
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeec
Q 027137 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (227)
Q Consensus 4 ~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~ 82 (227)
-+|.|.|. |.+|...++.+...+ .+++++.. +.+.+..+.++ |. . ..+...+.+ + . +. +
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~---~~~~~~~~~~~----ga-~-~~~d~~~~~-~--~-~~--~---- 227 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG---SEDKLRRAKAL----GA-D-ETVNYTHPD-W--P-KE--V---- 227 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES---SHHHHHHHHHH----TC-S-EEEETTSTT-H--H-HH--H----
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHhc----CC-C-EEEcCCccc-H--H-HH--H----
Confidence 47999995 999999998887664 68777653 23333333211 21 0 001100000 0 0 00 0
Q ss_pred CCCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCC-CCCCCeEEeccCccc-cCCCCcEEEcCChhhHhHH
Q 027137 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLA 160 (227)
Q Consensus 83 ~p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisap-s~d~p~~V~gVN~~~-~~~~~~IVSnaSCtTn~La 160 (227)
.++. ...++|+|||++| ....+.+-..++.|- +++.-+. +.+.+ .++... +..+..++..-..+...+.
T Consensus 228 --~~~~-~~~~~d~vi~~~g-~~~~~~~~~~l~~~G-~~v~~g~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~ 298 (343)
T 2eih_A 228 --RRLT-GGKGADKVVDHTG-ALYFEGVIKATANGG-RIAIAGASSGYEG----TLPFAHVFYRQLSILGSTMASKSRLF 298 (343)
T ss_dssp --HHHT-TTTCEEEEEESSC-SSSHHHHHHHEEEEE-EEEESSCCCSCCC----CCCTTHHHHTTCEEEECCSCCGGGHH
T ss_pred --HHHh-CCCCceEEEECCC-HHHHHHHHHhhccCC-EEEEEecCCCCcC----ccCHHHHHhCCcEEEEecCccHHHHH
Confidence 0000 1137999999999 455566666666543 3444332 22111 122221 1223344443333455667
Q ss_pred HHHHHHhhh
Q 027137 161 PLAKVIHDK 169 (227)
Q Consensus 161 p~lk~L~~~ 169 (227)
-+++.+.+.
T Consensus 299 ~~~~l~~~g 307 (343)
T 2eih_A 299 PILRFVEEG 307 (343)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 777777653
No 465
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=52.86 E-value=14 Score=32.39 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=28.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+.||.|.|-|.++..+++++.+. +++++++..+
T Consensus 7 ~~~ilI~g~g~~~~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 7 NKRLLILGAGRGQLGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp CCEEEEECCCGGGHHHHHHHHHH-TCEEEEEECS
T ss_pred CCEEEEECCcHhHHHHHHHHHHC-CCEEEEEcCC
Confidence 57999999999999999998876 5899998543
No 466
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=52.83 E-value=14 Score=30.84 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=27.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|++.+|.|+|.|..|-..+..|.+. +++++-+.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie 33 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILD 33 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 6568999999999999999888876 47766664
No 467
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=52.75 E-value=17 Score=31.14 Aligned_cols=30 Identities=33% Similarity=0.441 Sum_probs=22.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCc-eEEEE
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDV-ELVAV 33 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~-~ivaI 33 (227)
+||+|.| .|.+|..++..+...+.+ +++-+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~ 32 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFV 32 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 4899999 999999998888765433 44444
No 468
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=52.59 E-value=12 Score=34.46 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=28.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayl 46 (227)
-+|+|+|+|.+|-.++-.+.+. +++++++ |. +.+.+.-|
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~-Di--d~~kV~~l 60 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGY-DV--NPSIVERL 60 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEE-CS--CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEE-EC--CHHHHHHH
Confidence 5899999999998777766665 4888887 43 55555433
No 469
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=52.45 E-value=17 Score=32.04 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=25.6
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|+.++|+|+|.|..|...+..|.+. +.+++-+.
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E 33 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEK-GHQVHIID 33 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEE
Confidence 6668999999999999988888765 36665554
No 470
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=52.20 E-value=8.5 Score=32.82 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=24.2
Q ss_pred EEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 5 kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+|.|.|. |.+|...++.+...+ .+++++...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 184 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGN 184 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 6999995 999999888776554 677777643
No 471
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=51.72 E-value=18 Score=31.18 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=24.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
+||+|+|.|.+|..++..+...+-+.-+.+-|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999998887776653443444565
No 472
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=51.69 E-value=18 Score=31.14 Aligned_cols=30 Identities=20% Similarity=0.111 Sum_probs=26.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.||+|+|-|..|+.+++++.+. ++++++++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKA-GMKVVLVD 31 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 4899999999999999988776 59999885
No 473
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=51.58 E-value=16 Score=31.50 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=26.5
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
..+|-|-| .|.||+.+++.|.+.+ .+|+++..
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEe
Confidence 36899999 9999999999998874 78887743
No 474
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=51.24 E-value=9.7 Score=31.20 Aligned_cols=31 Identities=26% Similarity=0.590 Sum_probs=25.9
Q ss_pred EEEEEc-cChHHHHHHHHHHcC-CCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~-~~~~ivaInd 35 (227)
+|-|.| .|.||+.+++.|.+. ++.+++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 689999 899999999999876 3578887764
No 475
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=51.22 E-value=13 Score=31.38 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=22.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCC-ceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~-~~ivaIn 34 (227)
||++||.|.|-|.. ..+++.+.+..+ ++++++.
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d 35 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTAD 35 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEe
Confidence 77899999998854 235566655433 7888774
No 476
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=51.22 E-value=11 Score=30.91 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=25.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
|++.+|-|-| .|.||+.+++.|.+.+ .+++.+.
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 5556799999 8999999999998764 5655543
No 477
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=51.21 E-value=15 Score=30.23 Aligned_cols=31 Identities=29% Similarity=0.597 Sum_probs=26.3
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
..||-|.| .|.||+.+++.|.+.+ .+++++.
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 43 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN-VEVIPTD 43 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEEC
T ss_pred cceEEEECCCChHHHHHHHHHHhCC-CeEEecc
Confidence 36899999 8999999999998764 7888775
No 478
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=50.80 E-value=18 Score=29.99 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=25.8
Q ss_pred ccEEEEEccCh---------HHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGINGFGR---------IGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G~Gr---------IGr~~~r~l~~~~~~~ivaInd 35 (227)
++||+|+|-|. .|+.+++++.+. +++++.+..
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~-G~~v~~~~~ 42 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREG-GIDAYPVDP 42 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEECT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHC-CCeEEEEec
Confidence 47999999887 788888888777 488777753
No 479
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=50.72 E-value=19 Score=31.03 Aligned_cols=31 Identities=19% Similarity=0.287 Sum_probs=25.0
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|.|. |.||...++.+...+ .+++++..
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~ 192 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVN 192 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 47899995 999999988887664 68887764
No 480
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=50.70 E-value=11 Score=36.66 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=25.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 3 ~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
..||||+|.|.+|..++..+.+. +++++.. |.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-G~~V~l~-D~ 345 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-GTPILMK-DI 345 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-TCCEEEE-CS
T ss_pred CCEEEEECCChhhHHHHHHHHhC-CCEEEEE-EC
Confidence 35899999999999999998876 4776654 44
No 481
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=50.51 E-value=19 Score=29.95 Aligned_cols=30 Identities=23% Similarity=0.522 Sum_probs=25.2
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||-|-| .|.||+.+++.|.+.+ .+++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 32 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG-LEVAVLDN 32 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 799999 8999999999998764 78777643
No 482
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=50.51 E-value=17 Score=29.89 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=25.5
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||-|.| .|.||+.+++.|.+.+..+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 578999 8999999999998875367777764
No 483
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=50.12 E-value=14 Score=30.39 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=24.8
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||-|.| .|.||+.+++.|. . +.+++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r 31 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALDV 31 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEECT
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEecc
Confidence 899999 8999999999988 5 588888753
No 484
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=50.03 E-value=18 Score=32.00 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=20.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
||++||.|+|-|-....+++.+.+..+ ++++++
T Consensus 13 ~~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~ 45 (412)
T 1vkz_A 13 MKAVRVHILGSGGREHAIGWAFAKQGY-EVHFYP 45 (412)
T ss_dssp ---CEEEEEECSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCEEEEECCCHHHHHHHHHHHhCCC-CEEEEC
Confidence 678999999999333334455556666 888884
No 485
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=49.79 E-value=17 Score=31.42 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=23.3
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEeCC
Q 027137 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (227)
Q Consensus 4 ~kVgI~G~-GrIGr~~~r~l~~~~~~~ivaInd~ 36 (227)
|||+|+|. |.+|..++..+.+.+-..-+.+-|.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di 34 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI 34 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC
Confidence 39999996 9999999988876642222333444
No 486
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=49.71 E-value=30 Score=29.68 Aligned_cols=30 Identities=7% Similarity=0.172 Sum_probs=22.4
Q ss_pred EEEEE-ccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGIN-GFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~-G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+|-|. |.|.||...++.+...+ .+++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG-FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 45555 69999999888877664 68887763
No 487
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=49.67 E-value=14 Score=30.18 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=25.5
Q ss_pred EEEEEc-cChHHHHHHHHHHcC-CCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~-~~~~ivaInd 35 (227)
||-|.| .|.||+.+++.|.+. ++.+++++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 578999 899999999999876 3578887764
No 488
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=49.64 E-value=22 Score=28.32 Aligned_cols=30 Identities=17% Similarity=0.382 Sum_probs=25.1
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 5 kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
+|-|.| .|.||+.+++.|.+.+ .+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 789999 8999999999998874 77777653
No 489
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=49.63 E-value=23 Score=30.23 Aligned_cols=138 Identities=16% Similarity=0.090 Sum_probs=69.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhhcccccccCCCCcceEEeCCCeEEECCEEEEEEeecC
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd~~~~~~~~ayllkyDS~~Gkf~~~~v~~~~~~~l~i~gk~I~v~~~~~ 83 (227)
-+|.|.|.|-+|-..+..+......+++++.- +.+.+..+.++ |.. ..+...+.+ . . + .+ +
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~----Ga~--~~i~~~~~~-~-~--~--~v---~- 225 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKI----GAD--VTINSGDVN-P-V--D--EI---K- 225 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHT----TCS--EEEEC-CCC-H-H--H--HH---H-
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhc----CCe--EEEeCCCCC-H-H--H--Hh---h-
Confidence 36899999999998888777666688888753 23333222211 110 011110110 0 0 0 00 0
Q ss_pred CCCCCCccCCccEEEeecCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeccCcc-ccCCCCcEEEcCChhhHhHHHH
Q 027137 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTTNCLAPL 162 (227)
Q Consensus 84 p~~i~W~~~~vDiVve~tG~f~~~~~a~~hl~~GakkVIisaps~d~p~~V~gVN~~-~~~~~~~IVSnaSCtTn~Lap~ 162 (227)
++ -+..++|+++||+|...+.+.+-..++.|-+ +++.+.... + . .++.. .+.....+...-..+..-+.-+
T Consensus 226 --~~-t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~-~v~~g~~~~-~-~--~~~~~~~~~~~~~i~gs~~~~~~~~~~~ 297 (348)
T 4eez_A 226 --KI-TGGLGVQSAIVCAVARIAFEQAVASLKPMGK-MVAVAVPNT-E-M--TLSVPTVVFDGVEVAGSLVGTRLDLAEA 297 (348)
T ss_dssp --HH-TTSSCEEEEEECCSCHHHHHHHHHTEEEEEE-EEECCCCSC-E-E--EECHHHHHHSCCEEEECCSCCHHHHHHH
T ss_pred --hh-cCCCCceEEEEeccCcchhheeheeecCCce-EEEEeccCC-C-C--ccCHHHHHhCCeEEEEEecCCHHHHHHH
Confidence 00 0124799999999987665655555554432 333332211 1 0 11111 1112345555544555567777
Q ss_pred HHHHhh
Q 027137 163 AKVIHD 168 (227)
Q Consensus 163 lk~L~~ 168 (227)
++.+.+
T Consensus 298 ~~l~~~ 303 (348)
T 4eez_A 298 FQFGAE 303 (348)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 777665
No 490
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=49.45 E-value=9.7 Score=25.43 Aligned_cols=30 Identities=17% Similarity=0.457 Sum_probs=22.6
Q ss_pred cceEEeCCCeEEECCEEEEEEeecCCCCCCCc
Q 027137 59 HELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 90 (227)
Q Consensus 59 ~~v~~~~~~~l~i~gk~I~v~~~~~p~~i~W~ 90 (227)
+++.++++..|.||||.|+.. .|.-+-+|.
T Consensus 11 gtidieddtsltingkeisyv--hdavknkws 40 (73)
T 2jv8_A 11 GTIDIEDDTSLTINGKEISYV--HDAVKNKWS 40 (73)
T ss_dssp EEEEEETTEEEEETTEECCCC--CCSSSCCCC
T ss_pred CeeeeccCceeEECCEEeehH--HHHHhcccc
Confidence 678888887899999999875 344455675
No 491
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=49.43 E-value=20 Score=29.74 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=26.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
..+|-|-| .|.||+.+++.|.+.+ .+|+++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 36899999 8999999999998874 78877754
No 492
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=49.15 E-value=16 Score=32.16 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=26.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEeC
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
||++||++.|....+..+++++.+. +.+|++|-.
T Consensus 20 ~~~mrIvf~G~~~fa~~~L~~L~~~-~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIGQSLFGQEVYCHLRKE-GHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEECCHHHHHHHHHHHHHT-TCEEEEEEE
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEEe
Confidence 4568999999888887788988876 478887753
No 493
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=48.76 E-value=22 Score=30.15 Aligned_cols=31 Identities=16% Similarity=0.305 Sum_probs=25.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEeC
Q 027137 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (227)
Q Consensus 4 ~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaInd 35 (227)
-+|.|+| .|.+|...++.+...+ .+++++..
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~ 185 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG-TTVITTAS 185 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEec
Confidence 4789997 9999999988887664 68887754
No 494
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=48.74 E-value=19 Score=30.39 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=26.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 1 m~~~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
|++.+|.|+|.|..|-..++.|.+.+ . +++-|.
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~lie 35 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG-ITDVIILE 35 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC-CCcEEEEe
Confidence 55678999999999999998887663 5 666564
No 495
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=48.55 E-value=27 Score=28.94 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=23.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~-~ivaIn 34 (227)
.||.|+|.|.+|..+++.|...+ + +++-+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~G-v~~i~lvD 62 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAG-VGNLTLLD 62 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 58999999999999999998664 5 444443
No 496
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=48.49 E-value=18 Score=31.18 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 027137 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 4 ~kVgI~G~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
.||+|.|-|..|+.+++++.+. +++++.+.
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~-G~~v~~~~ 31 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKL-GFKFHVLE 31 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 4899999999999999998776 58888775
No 497
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=48.42 E-value=22 Score=27.43 Aligned_cols=30 Identities=23% Similarity=0.407 Sum_probs=25.1
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~~ivaIn 34 (227)
+||+-|.| .|.||+.+++.+. . +.+++.+.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~ 33 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K-KAEVITAG 33 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T-TSEEEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEe
Confidence 35899999 8999999999998 5 57877764
No 498
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=48.31 E-value=19 Score=30.93 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=26.5
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCc-eEEEEeC
Q 027137 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVND 35 (227)
Q Consensus 3 ~~kVgI~G-~GrIGr~~~r~l~~~~~~-~ivaInd 35 (227)
..+|-|-| .|.||+.+++.|.+.++. +|+++..
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 46899999 899999999999877234 7777654
No 499
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=48.05 E-value=21 Score=30.63 Aligned_cols=30 Identities=30% Similarity=0.510 Sum_probs=22.9
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCc-eEEEE
Q 027137 4 VKIGINGF-GRIGRLVARVILQRDDV-ELVAV 33 (227)
Q Consensus 4 ~kVgI~G~-GrIGr~~~r~l~~~~~~-~ivaI 33 (227)
+||.|.|. |.+|..++..+...+.+ +++-+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~ 32 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLI 32 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEE
Confidence 38999996 99999999988876533 44444
No 500
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.91 E-value=24 Score=27.96 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=27.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCC-ceEEEEeC
Q 027137 1 MGKVKIGING-FGRIGRLVARVILQRDD-VELVAVND 35 (227)
Q Consensus 1 m~~~kVgI~G-~GrIGr~~~r~l~~~~~-~~ivaInd 35 (227)
|+..++-|.| .|-||+.+++.+.+.+. .+++++..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec
Confidence 5556788999 89999999999987743 67776654
Done!