Query 027139
Match_columns 227
No_of_seqs 27 out of 29
Neff 2.0
Searched_HMMs 29240
Date Mon Mar 25 08:41:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jwg_A HEN1, methyltransferase 97.4 0.00032 1.1E-08 53.0 5.9 101 92-193 30-140 (219)
2 1xtp_A LMAJ004091AAA; SGPP, st 97.2 0.00025 8.5E-09 54.2 4.1 102 91-194 93-197 (254)
3 2p8j_A S-adenosylmethionine-de 97.2 0.00026 9E-09 52.5 3.7 115 77-194 11-128 (209)
4 3jwh_A HEN1; methyltransferase 97.2 0.001 3.5E-08 50.3 7.0 102 92-194 30-141 (217)
5 3cgg_A SAM-dependent methyltra 97.1 0.00074 2.5E-08 48.6 5.3 101 91-195 46-148 (195)
6 3h2b_A SAM-dependent methyltra 97.0 0.00079 2.7E-08 50.1 4.7 99 92-194 42-141 (203)
7 2ex4_A Adrenal gland protein A 97.0 0.00062 2.1E-08 52.5 4.2 102 92-194 80-185 (241)
8 3d2l_A SAM-dependent methyltra 97.0 0.0013 4.4E-08 49.7 5.9 97 93-193 35-136 (243)
9 3lcc_A Putative methyl chlorid 97.0 0.0011 3.6E-08 50.8 5.2 103 93-198 68-175 (235)
10 2xvm_A Tellurite resistance pr 96.8 0.0012 4.2E-08 48.2 4.4 98 93-193 34-135 (199)
11 3g5l_A Putative S-adenosylmeth 96.8 0.00084 2.9E-08 51.8 3.5 107 82-193 34-144 (253)
12 2yqz_A Hypothetical protein TT 96.7 0.0012 4E-08 50.5 3.7 102 91-197 39-143 (263)
13 1y8c_A S-adenosylmethionine-de 96.6 0.0052 1.8E-07 46.1 6.5 103 88-193 34-141 (246)
14 3m70_A Tellurite resistance pr 96.6 0.0028 9.7E-08 50.0 5.1 101 91-194 120-223 (286)
15 3pfg_A N-methyltransferase; N, 96.4 0.006 2.1E-07 47.4 6.1 111 77-193 37-150 (263)
16 3e23_A Uncharacterized protein 96.4 0.002 6.8E-08 48.3 3.2 98 93-196 45-143 (211)
17 3bxo_A N,N-dimethyltransferase 96.4 0.0058 2E-07 46.0 5.7 110 79-194 29-141 (239)
18 3ujc_A Phosphoethanolamine N-m 96.4 0.0013 4.3E-08 50.2 2.0 101 92-194 56-159 (266)
19 3cc8_A Putative methyltransfer 96.4 0.002 6.8E-08 47.7 3.0 98 90-194 31-130 (230)
20 3dtn_A Putative methyltransfer 96.3 0.0019 6.5E-08 49.0 2.8 101 91-194 44-148 (234)
21 3f4k_A Putative methyltransfer 96.3 0.0027 9.2E-08 48.7 3.7 98 93-194 48-150 (257)
22 2yxd_A Probable cobalt-precorr 96.3 0.002 6.8E-08 46.1 2.5 112 92-213 36-151 (183)
23 3hm2_A Precorrin-6Y C5,15-meth 96.3 0.007 2.4E-07 43.5 5.3 101 91-197 25-130 (178)
24 1ve3_A Hypothetical protein PH 96.1 0.0064 2.2E-07 45.4 4.7 115 77-194 25-142 (227)
25 3hnr_A Probable methyltransfer 96.1 0.0063 2.2E-07 45.6 4.6 99 91-194 45-145 (220)
26 3ofk_A Nodulation protein S; N 96.1 0.0064 2.2E-07 45.6 4.5 111 79-193 38-153 (216)
27 3dli_A Methyltransferase; PSI- 96.0 0.0031 1.1E-07 48.6 2.6 96 93-194 43-140 (240)
28 3bkw_A MLL3908 protein, S-aden 96.0 0.0088 3E-07 45.1 4.9 98 92-194 44-144 (243)
29 2i62_A Nicotinamide N-methyltr 96.0 0.01 3.6E-07 45.3 5.2 105 92-196 57-200 (265)
30 3sm3_A SAM-dependent methyltra 96.0 0.0037 1.3E-07 46.6 2.6 100 91-194 30-141 (235)
31 3dlc_A Putative S-adenosyl-L-m 95.9 0.016 5.6E-07 42.5 6.0 111 81-194 33-148 (219)
32 1xxl_A YCGJ protein; structura 95.9 0.02 6.9E-07 44.2 6.8 111 80-194 10-124 (239)
33 2pxx_A Uncharacterized protein 95.9 0.0035 1.2E-07 46.1 2.3 103 91-195 42-160 (215)
34 2avn_A Ubiquinone/menaquinone 95.8 0.0088 3E-07 46.9 4.4 105 81-194 45-152 (260)
35 3l8d_A Methyltransferase; stru 95.8 0.0082 2.8E-07 45.4 3.9 109 79-194 42-153 (242)
36 1kpg_A CFA synthase;, cyclopro 95.8 0.0036 1.2E-07 49.2 2.1 99 92-194 65-168 (287)
37 3dh0_A SAM dependent methyltra 95.7 0.01 3.5E-07 44.4 4.2 99 93-194 39-143 (219)
38 4gek_A TRNA (CMO5U34)-methyltr 95.6 0.018 6E-07 47.1 5.7 116 75-193 54-177 (261)
39 3g5t_A Trans-aconitate 3-methy 95.6 0.013 4.5E-07 46.8 4.8 106 83-192 28-147 (299)
40 2gs9_A Hypothetical protein TT 95.6 0.014 4.7E-07 43.6 4.5 96 91-194 36-132 (211)
41 3i9f_A Putative type 11 methyl 95.6 0.013 4.6E-07 42.2 4.3 94 92-194 18-112 (170)
42 3ou2_A SAM-dependent methyltra 95.4 0.016 5.6E-07 42.8 4.3 94 93-194 48-146 (218)
43 3ege_A Putative methyltransfer 95.4 0.028 9.4E-07 44.2 5.8 100 91-197 34-134 (261)
44 3g2m_A PCZA361.24; SAM-depende 95.4 0.016 5.5E-07 46.3 4.5 106 85-193 76-189 (299)
45 2fk8_A Methoxy mycolic acid sy 95.3 0.011 3.8E-07 47.5 3.4 99 92-194 91-194 (318)
46 4htf_A S-adenosylmethionine-de 95.3 0.019 6.5E-07 45.3 4.6 103 86-194 63-173 (285)
47 1vl5_A Unknown conserved prote 95.2 0.031 1.1E-06 43.3 5.6 100 91-194 37-140 (260)
48 1ri5_A MRNA capping enzyme; me 95.2 0.034 1.1E-06 43.2 5.7 105 86-194 59-174 (298)
49 2p7i_A Hypothetical protein; p 94.9 0.026 8.7E-07 42.1 4.0 95 93-194 44-141 (250)
50 3grz_A L11 mtase, ribosomal pr 94.8 0.026 8.9E-07 42.2 4.0 106 92-205 61-170 (205)
51 1dus_A MJ0882; hypothetical pr 94.8 0.022 7.7E-07 40.8 3.4 105 91-199 52-162 (194)
52 1tw3_A COMT, carminomycin 4-O- 94.7 0.035 1.2E-06 45.5 4.8 110 82-194 173-288 (360)
53 3bgv_A MRNA CAP guanine-N7 met 94.7 0.035 1.2E-06 44.7 4.7 104 91-194 34-155 (313)
54 3bkx_A SAM-dependent methyltra 94.7 0.11 3.6E-06 40.3 7.2 102 91-194 43-159 (275)
55 4hg2_A Methyltransferase type 94.6 0.065 2.2E-06 43.9 6.1 103 81-195 30-136 (257)
56 2g72_A Phenylethanolamine N-me 94.6 0.081 2.8E-06 42.0 6.5 102 92-194 72-215 (289)
57 2o57_A Putative sarcosine dime 94.5 0.049 1.7E-06 43.0 5.0 101 91-194 82-187 (297)
58 3htx_A HEN1; HEN1, small RNA m 94.3 0.084 2.9E-06 53.3 7.4 102 91-193 721-833 (950)
59 3kkz_A Uncharacterized protein 94.3 0.032 1.1E-06 43.5 3.6 99 92-194 47-150 (267)
60 3ccf_A Cyclopropane-fatty-acyl 94.2 0.044 1.5E-06 43.2 4.2 93 92-193 58-153 (279)
61 1yzh_A TRNA (guanine-N(7)-)-me 94.0 0.06 2E-06 40.9 4.4 126 84-210 34-173 (214)
62 3vc1_A Geranyl diphosphate 2-C 94.0 0.037 1.3E-06 44.7 3.4 99 92-194 118-221 (312)
63 3mgg_A Methyltransferase; NYSG 93.9 0.05 1.7E-06 42.4 3.9 99 92-193 38-141 (276)
64 1qzz_A RDMB, aclacinomycin-10- 93.7 0.073 2.5E-06 43.7 4.7 111 82-195 172-288 (374)
65 2r3s_A Uncharacterized protein 93.6 0.23 7.9E-06 39.8 7.4 107 82-193 153-270 (335)
66 1ej0_A FTSJ; methyltransferase 93.4 0.048 1.7E-06 37.9 2.7 101 91-200 22-142 (180)
67 2zfu_A Nucleomethylin, cerebra 93.3 0.12 4.3E-06 38.6 5.1 85 91-195 67-152 (215)
68 1wzn_A SAM-dependent methyltra 93.2 0.12 4E-06 39.6 4.9 99 91-192 41-143 (252)
69 1nkv_A Hypothetical protein YJ 93.2 0.067 2.3E-06 40.9 3.5 98 92-193 37-139 (256)
70 3bus_A REBM, methyltransferase 93.2 0.21 7.1E-06 38.7 6.3 101 91-194 61-166 (273)
71 1ne2_A Hypothetical protein TA 93.2 0.11 3.6E-06 38.8 4.5 110 91-210 51-162 (200)
72 2ip2_A Probable phenazine-spec 93.1 0.37 1.3E-05 39.0 8.0 110 81-194 157-272 (334)
73 3dp7_A SAM-dependent methyltra 92.9 0.17 5.7E-06 42.4 5.7 107 82-194 170-287 (363)
74 3lbf_A Protein-L-isoaspartate 92.8 0.11 3.9E-06 38.7 4.2 99 91-199 77-179 (210)
75 2kw5_A SLR1183 protein; struct 92.8 0.13 4.3E-06 38.1 4.4 97 94-194 32-131 (202)
76 3gu3_A Methyltransferase; alph 92.8 0.082 2.8E-06 42.1 3.6 98 92-193 23-125 (284)
77 3bzb_A Uncharacterized protein 92.4 0.17 5.7E-06 41.1 5.0 102 93-196 81-207 (281)
78 3p9n_A Possible methyltransfer 92.4 0.23 7.7E-06 36.9 5.3 114 80-194 33-153 (189)
79 3thr_A Glycine N-methyltransfe 92.3 0.066 2.3E-06 42.0 2.4 100 92-193 58-174 (293)
80 3iv6_A Putative Zn-dependent a 92.2 0.12 4E-06 43.4 3.9 102 93-197 47-151 (261)
81 3m33_A Uncharacterized protein 92.1 0.49 1.7E-05 36.3 7.0 94 90-194 47-142 (226)
82 2p35_A Trans-aconitate 2-methy 92.0 0.16 5.6E-06 38.6 4.2 98 91-194 33-132 (259)
83 3g07_A 7SK snRNA methylphospha 91.7 0.08 2.7E-06 42.9 2.3 105 92-196 47-222 (292)
84 1p91_A Ribosomal RNA large sub 91.6 0.41 1.4E-05 37.1 6.2 93 90-194 84-178 (269)
85 1vlm_A SAM-dependent methyltra 91.5 0.66 2.2E-05 35.1 7.1 101 80-194 38-139 (219)
86 1vbf_A 231AA long hypothetical 91.4 0.35 1.2E-05 36.6 5.4 95 92-197 71-168 (231)
87 3e8s_A Putative SAM dependent 91.3 0.22 7.4E-06 36.6 4.1 95 93-194 54-152 (227)
88 4fsd_A Arsenic methyltransfera 91.3 0.3 1E-05 41.3 5.5 102 91-194 83-203 (383)
89 3i53_A O-methyltransferase; CO 91.2 0.34 1.2E-05 39.4 5.6 108 81-194 158-274 (332)
90 1l3i_A Precorrin-6Y methyltran 91.0 0.1 3.6E-06 37.2 2.1 114 91-211 33-152 (192)
91 3q87_B N6 adenine specific DNA 90.8 0.55 1.9E-05 34.9 6.0 101 93-203 25-132 (170)
92 2yxe_A Protein-L-isoaspartate 90.5 0.25 8.7E-06 36.9 3.9 97 92-197 78-180 (215)
93 3hem_A Cyclopropane-fatty-acyl 90.4 0.29 9.9E-06 39.0 4.4 99 92-194 73-183 (302)
94 1fbn_A MJ fibrillarin homologu 90.4 0.16 5.4E-06 39.3 2.7 95 93-193 76-177 (230)
95 1zx0_A Guanidinoacetate N-meth 90.2 0.24 8.1E-06 38.1 3.6 104 91-194 60-170 (236)
96 3mti_A RRNA methylase; SAM-dep 89.9 0.34 1.2E-05 35.4 4.1 100 93-198 24-139 (185)
97 1mjf_A Spermidine synthase; sp 89.6 0.053 1.8E-06 44.4 -0.5 115 76-197 63-197 (281)
98 1jg1_A PIMT;, protein-L-isoasp 89.6 0.27 9.3E-06 37.9 3.5 95 93-196 93-191 (235)
99 1ws6_A Methyltransferase; stru 89.2 0.13 4.6E-06 36.4 1.4 116 92-213 42-165 (171)
100 1inl_A Spermidine synthase; be 88.9 0.2 7E-06 41.4 2.5 119 75-197 77-209 (296)
101 2esr_A Methyltransferase; stru 88.9 0.076 2.6E-06 38.6 -0.1 104 92-198 32-142 (177)
102 2fpo_A Methylase YHHF; structu 88.8 0.1 3.4E-06 40.0 0.5 104 93-199 56-165 (202)
103 1yb2_A Hypothetical protein TA 88.6 0.36 1.2E-05 38.5 3.7 98 93-199 112-216 (275)
104 1jsx_A Glucose-inhibited divis 88.6 0.61 2.1E-05 34.5 4.7 107 93-208 67-178 (207)
105 3adn_A Spermidine synthase; am 88.5 0.55 1.9E-05 39.4 4.9 125 69-197 64-202 (294)
106 2pt6_A Spermidine synthase; tr 88.2 0.2 7E-06 42.2 2.1 117 76-197 104-234 (321)
107 3ocj_A Putative exported prote 88.2 0.63 2.1E-05 37.4 4.9 102 91-194 118-227 (305)
108 3ggd_A SAM-dependent methyltra 87.7 0.077 2.6E-06 40.6 -0.7 100 92-194 57-163 (245)
109 1x19_A CRTF-related protein; m 87.7 2.7 9.3E-05 34.6 8.5 108 81-194 179-295 (359)
110 2nxc_A L11 mtase, ribosomal pr 87.6 0.28 9.4E-06 39.2 2.4 103 92-205 121-229 (254)
111 3lst_A CALO1 methyltransferase 87.5 0.67 2.3E-05 38.3 4.8 108 82-194 174-286 (348)
112 2aot_A HMT, histamine N-methyl 87.5 0.46 1.6E-05 37.9 3.7 111 79-193 38-171 (292)
113 2a14_A Indolethylamine N-methy 87.1 0.54 1.9E-05 37.2 3.8 55 141-195 138-198 (263)
114 1r18_A Protein-L-isoaspartate( 87.0 0.5 1.7E-05 36.1 3.5 95 93-196 86-196 (227)
115 2o07_A Spermidine synthase; st 86.8 0.24 8.4E-06 41.5 1.8 118 76-198 83-214 (304)
116 2yvl_A TRMI protein, hypotheti 86.5 1.1 3.9E-05 33.9 5.2 99 92-199 92-195 (248)
117 1iy9_A Spermidine synthase; ro 86.2 0.4 1.4E-05 39.3 2.7 118 76-197 63-193 (275)
118 1i1n_A Protein-L-isoaspartate 86.2 0.57 1.9E-05 35.4 3.4 108 92-208 78-196 (226)
119 1pjz_A Thiopurine S-methyltran 86.1 0.36 1.2E-05 36.9 2.2 94 93-188 24-133 (203)
120 4e2x_A TCAB9; kijanose, tetron 86.1 0.052 1.8E-06 45.6 -2.7 103 83-193 98-207 (416)
121 3dmg_A Probable ribosomal RNA 86.0 0.88 3E-05 39.5 4.9 122 74-197 216-343 (381)
122 2gb4_A Thiopurine S-methyltran 85.9 0.49 1.7E-05 38.4 3.0 100 92-193 69-190 (252)
123 3mb5_A SAM-dependent methyltra 85.8 0.91 3.1E-05 34.9 4.4 110 92-210 94-211 (255)
124 2ift_A Putative methylase HI07 85.7 0.34 1.1E-05 37.0 1.9 103 93-198 55-167 (201)
125 3eey_A Putative rRNA methylase 85.3 1.4 4.7E-05 32.4 5.0 107 91-197 22-142 (197)
126 3e05_A Precorrin-6Y C5,15-meth 85.1 1.2 4.1E-05 33.2 4.6 114 91-210 40-159 (204)
127 2pjd_A Ribosomal RNA small sub 85.1 0.35 1.2E-05 40.3 1.9 100 93-195 198-304 (343)
128 3gwz_A MMCR; methyltransferase 85.0 2.4 8.1E-05 35.5 6.9 108 80-193 190-306 (369)
129 1fp2_A Isoflavone O-methyltran 84.8 0.64 2.2E-05 38.3 3.3 95 91-194 188-288 (352)
130 1wy7_A Hypothetical protein PH 84.3 0.87 3E-05 33.8 3.5 122 92-219 50-175 (207)
131 1fp1_D Isoliquiritigenin 2'-O- 83.8 1.1 3.8E-05 37.3 4.4 104 81-193 197-305 (372)
132 3mcz_A O-methyltransferase; ad 83.7 1.6 5.5E-05 35.5 5.2 100 92-194 180-287 (352)
133 2b3t_A Protein methyltransfera 83.5 1.2 4.1E-05 35.3 4.3 71 91-163 109-183 (276)
134 2y1w_A Histone-arginine methyl 83.4 1.8 6.2E-05 36.2 5.5 95 93-193 52-154 (348)
135 3njr_A Precorrin-6Y methylase; 82.1 1.5 5E-05 33.7 4.2 110 92-210 56-171 (204)
136 1uir_A Polyamine aminopropyltr 81.8 0.56 1.9E-05 39.1 1.8 119 75-197 64-199 (314)
137 1i9g_A Hypothetical protein RV 81.7 0.79 2.7E-05 35.8 2.5 95 93-195 101-204 (280)
138 2bm8_A Cephalosporin hydroxyla 81.7 2.6 9E-05 33.3 5.6 92 93-193 83-186 (236)
139 2qe6_A Uncharacterized protein 81.6 3 0.0001 33.9 6.1 100 91-195 77-197 (274)
140 1uwv_A 23S rRNA (uracil-5-)-me 81.5 0.97 3.3E-05 39.4 3.3 111 93-211 288-406 (433)
141 2ld4_A Anamorsin; methyltransf 81.3 0.74 2.5E-05 33.5 2.1 53 139-193 44-100 (176)
142 2pwy_A TRNA (adenine-N(1)-)-me 80.8 0.84 2.9E-05 34.8 2.4 97 91-195 96-199 (258)
143 2b2c_A Spermidine synthase; be 80.7 0.89 3E-05 38.5 2.7 117 75-197 95-226 (314)
144 3r0q_C Probable protein argini 80.4 1.5 5.2E-05 37.3 4.0 94 93-193 65-168 (376)
145 2pbf_A Protein-L-isoaspartate 80.4 0.55 1.9E-05 35.5 1.2 96 93-196 82-195 (227)
146 2fca_A TRNA (guanine-N(7)-)-me 80.1 1.2 4E-05 34.4 3.0 123 84-210 31-170 (213)
147 1o9g_A RRNA methyltransferase; 79.7 1.3 4.6E-05 34.3 3.2 107 91-197 51-217 (250)
148 3evz_A Methyltransferase; NYSG 78.8 1.6 5.3E-05 32.9 3.2 74 90-163 54-130 (230)
149 2fhp_A Methylase, putative; al 78.1 0.46 1.6E-05 34.2 0.1 104 92-198 45-158 (187)
150 1nt2_A Fibrillarin-like PRE-rR 77.6 1.7 5.7E-05 33.9 3.2 94 93-193 59-160 (210)
151 3dxy_A TRNA (guanine-N(7)-)-me 77.1 1.3 4.4E-05 34.8 2.4 111 84-197 27-153 (218)
152 1g8a_A Fibrillarin-like PRE-rR 77.0 1.3 4.5E-05 33.5 2.4 96 93-193 75-177 (227)
153 3gdh_A Trimethylguanosine synt 76.9 1.9 6.6E-05 32.8 3.3 96 93-193 80-180 (241)
154 2ipx_A RRNA 2'-O-methyltransfe 76.7 1.6 5.6E-05 33.3 2.9 99 93-196 79-184 (233)
155 3q7e_A Protein arginine N-meth 76.3 2.6 8.7E-05 35.5 4.2 99 93-192 68-171 (349)
156 3tfw_A Putative O-methyltransf 76.3 2.4 8E-05 33.4 3.7 114 75-194 49-170 (248)
157 2qm3_A Predicted methyltransfe 76.0 3.1 0.00011 35.2 4.7 101 92-199 173-285 (373)
158 2vdw_A Vaccinia virus capping 75.5 1.4 4.7E-05 36.7 2.3 102 93-194 50-169 (302)
159 4dzr_A Protein-(glutamine-N5) 75.0 1.5 5.2E-05 31.8 2.2 72 91-162 30-107 (215)
160 2vdv_E TRNA (guanine-N(7)-)-me 74.9 1.6 5.5E-05 34.0 2.4 73 91-163 49-135 (246)
161 3ntv_A MW1564 protein; rossman 74.6 1.3 4.6E-05 34.3 1.9 97 92-192 72-174 (232)
162 2b25_A Hypothetical protein; s 74.1 2.1 7E-05 35.1 3.0 105 93-204 107-230 (336)
163 1zg3_A Isoflavanone 4'-O-methy 72.5 1.9 6.5E-05 35.6 2.4 95 91-194 193-293 (358)
164 1o54_A SAM-dependent O-methylt 72.4 5.1 0.00017 31.6 4.8 94 93-195 114-214 (277)
165 3lpm_A Putative methyltransfer 72.3 2.5 8.4E-05 33.2 2.9 72 92-163 50-126 (259)
166 3u81_A Catechol O-methyltransf 71.9 2.6 9E-05 32.1 2.9 105 92-198 59-176 (221)
167 3tr6_A O-methyltransferase; ce 71.6 1.4 4.8E-05 33.1 1.3 119 73-198 48-180 (225)
168 2fyt_A Protein arginine N-meth 71.5 5.8 0.0002 33.3 5.2 95 93-191 66-168 (340)
169 1u2z_A Histone-lysine N-methyl 68.3 3.5 0.00012 37.3 3.4 100 91-193 242-358 (433)
170 2gpy_A O-methyltransferase; st 66.6 1.8 6.1E-05 33.0 1.0 97 93-193 56-159 (233)
171 1g6q_1 HnRNP arginine N-methyl 66.0 11 0.00039 31.1 5.8 95 93-191 40-142 (328)
172 2i7c_A Spermidine synthase; tr 63.4 1.6 5.6E-05 35.7 0.2 114 75-194 65-192 (283)
173 2cmg_A Spermidine synthase; tr 60.9 6 0.00021 32.4 3.2 110 75-199 59-177 (262)
174 2plw_A Ribosomal RNA methyltra 60.6 9.8 0.00033 27.8 4.0 100 92-199 23-159 (201)
175 3opn_A Putative hemolysin; str 59.8 1.4 4.6E-05 35.4 -0.8 93 93-196 39-139 (232)
176 3orh_A Guanidinoacetate N-meth 59.4 10 0.00035 29.6 4.2 102 90-194 59-170 (236)
177 2yx1_A Hypothetical protein MJ 58.2 7.6 0.00026 32.5 3.4 91 93-195 197-292 (336)
178 1xj5_A Spermidine synthase 1; 56.9 7.9 0.00027 33.1 3.4 119 75-198 107-240 (334)
179 4dcm_A Ribosomal RNA large sub 56.7 9 0.00031 33.0 3.7 104 93-198 224-338 (375)
180 3hp7_A Hemolysin, putative; st 56.3 9.7 0.00033 32.6 3.8 107 93-211 87-201 (291)
181 1sui_A Caffeoyl-COA O-methyltr 56.2 8.7 0.0003 30.5 3.3 110 75-193 65-189 (247)
182 1nv8_A HEMK protein; class I a 54.0 20 0.00069 29.3 5.2 67 93-162 125-198 (284)
183 2frn_A Hypothetical protein PH 52.7 10 0.00035 30.5 3.3 94 93-194 127-225 (278)
184 3a27_A TYW2, uncharacterized p 52.6 6.8 0.00023 31.6 2.2 97 93-197 121-222 (272)
185 1dl5_A Protein-L-isoaspartate 51.6 18 0.00063 29.5 4.6 97 92-197 76-178 (317)
186 3c3p_A Methyltransferase; NP_9 49.4 23 0.00079 26.4 4.5 96 92-193 57-159 (210)
187 2jjq_A Uncharacterized RNA met 46.1 17 0.0006 32.0 3.9 106 92-207 291-400 (425)
188 2ozv_A Hypothetical protein AT 46.1 13 0.00046 29.5 2.9 72 92-163 37-122 (260)
189 3id6_C Fibrillarin-like rRNA/T 45.7 15 0.00051 30.1 3.2 94 93-193 78-180 (232)
190 3cbg_A O-methyltransferase; cy 45.3 24 0.00081 27.3 4.2 114 74-193 57-181 (232)
191 3l5o_A Uncharacterized protein 44.9 11 0.00036 32.7 2.3 37 171-210 195-232 (270)
192 1qam_A ERMC' methyltransferase 44.8 9.3 0.00032 30.4 1.8 77 93-174 32-111 (244)
193 1xdz_A Methyltransferase GIDB; 43.9 15 0.00053 28.2 2.9 95 92-193 71-173 (240)
194 3reo_A (ISO)eugenol O-methyltr 43.9 19 0.00065 30.2 3.6 105 82-194 192-300 (368)
195 3c3y_A Pfomt, O-methyltransfer 43.5 13 0.00043 29.1 2.3 111 74-193 55-180 (237)
196 3r3h_A O-methyltransferase, SA 41.6 12 0.00041 29.7 1.9 115 73-193 44-169 (242)
197 3ckk_A TRNA (guanine-N(7)-)-me 41.5 16 0.00056 28.9 2.7 118 89-210 44-185 (235)
198 2nyu_A Putative ribosomal RNA 40.3 17 0.00058 26.3 2.5 99 93-199 24-150 (196)
199 2h1r_A Dimethyladenosine trans 39.8 22 0.00076 29.2 3.4 68 93-166 44-115 (299)
200 1uf3_A Hypothetical protein TT 39.7 40 0.0014 24.6 4.4 6 189-194 35-40 (228)
201 2hnk_A SAM-dependent O-methylt 37.3 9.6 0.00033 29.3 0.8 96 93-193 62-180 (239)
202 3dr5_A Putative O-methyltransf 37.3 25 0.00086 27.5 3.2 116 74-193 38-162 (221)
203 3duw_A OMT, O-methyltransferas 36.6 28 0.00097 25.9 3.2 114 74-194 43-167 (223)
204 1yub_A Ermam, rRNA methyltrans 35.9 11 0.00038 29.5 1.0 69 92-165 30-101 (245)
205 3b3j_A Histone-arginine methyl 35.6 29 0.00098 31.1 3.7 94 93-192 160-261 (480)
206 3bwc_A Spermidine synthase; SA 35.2 17 0.00059 29.9 2.0 104 92-196 96-213 (304)
207 1af7_A Chemotaxis receptor met 31.7 28 0.00096 29.0 2.8 41 154-194 211-251 (274)
208 1zq9_A Probable dimethyladenos 31.7 37 0.0013 27.6 3.4 69 92-166 29-102 (285)
209 2h00_A Methyltransferase 10 do 30.7 41 0.0014 25.8 3.3 71 93-163 67-147 (254)
210 1sqg_A SUN protein, FMU protei 30.5 25 0.00086 30.3 2.3 113 93-205 248-388 (429)
211 3rht_A (gatase1)-like protein; 29.9 36 0.0012 28.7 3.1 39 155-195 49-88 (259)
212 1o6a_A Putative flagellar moto 29.7 9.8 0.00034 27.7 -0.3 29 174-202 48-76 (96)
213 3gjy_A Spermidine synthase; AP 29.7 8.6 0.0003 33.4 -0.7 98 94-194 92-200 (317)
214 3p9c_A Caffeic acid O-methyltr 29.6 71 0.0024 26.7 4.9 104 82-193 190-297 (364)
215 3fpf_A Mtnas, putative unchara 29.3 61 0.0021 28.0 4.6 96 93-199 124-227 (298)
216 3izc_W 60S ribosomal protein R 28.8 16 0.00054 29.2 0.7 23 166-188 76-99 (121)
217 2xyq_A Putative 2'-O-methyl tr 27.6 40 0.0014 28.6 3.0 103 93-210 65-188 (290)
218 3lcv_B Sisomicin-gentamicin re 26.2 61 0.0021 28.7 4.0 110 80-191 115-233 (281)
219 2pe4_A Hyaluronidase-1; hyalur 25.0 24 0.00082 32.9 1.3 50 140-194 250-304 (424)
220 2jwa_A Receptor tyrosine-prote 24.8 36 0.0012 22.8 1.8 16 29-44 7-22 (44)
221 2yv2_A Succinyl-COA synthetase 24.4 17 0.00058 30.6 0.2 43 166-208 76-119 (297)
222 1ixk_A Methyltransferase; open 23.8 52 0.0018 27.1 3.0 112 93-205 120-260 (315)
223 3s93_A Tudor domain-containing 23.1 25 0.00086 26.4 0.9 50 148-208 42-93 (102)
224 3c0k_A UPF0064 protein YCCW; P 23.0 27 0.00092 29.6 1.1 119 92-216 221-367 (396)
225 3rco_A Tudor domain-containing 22.8 42 0.0014 25.1 2.0 67 124-201 10-88 (89)
226 2avd_A Catechol-O-methyltransf 21.7 41 0.0014 25.1 1.8 114 74-194 54-179 (229)
227 1o9y_A HRCQ2; secretory protei 21.7 19 0.00065 25.5 -0.0 29 174-202 44-72 (84)
228 2yxl_A PH0851 protein, 450AA l 21.3 65 0.0022 28.0 3.2 110 93-205 261-403 (450)
229 2h1q_A Hypothetical protein; Z 21.3 31 0.001 29.6 1.2 26 172-197 196-222 (270)
230 2b78_A Hypothetical protein SM 21.1 32 0.0011 29.4 1.3 106 93-199 214-336 (385)
231 3iec_E 120 kDa protein, cytoto 21.1 20 0.00067 28.8 -0.1 37 173-214 51-87 (125)
232 1oi7_A Succinyl-COA synthetase 20.3 21 0.00071 30.0 -0.1 43 166-208 69-112 (288)
233 4fx0_A Probable transcriptiona 20.2 23 0.00079 25.9 0.1 66 76-145 10-86 (148)
No 1
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.36 E-value=0.00032 Score=52.97 Aligned_cols=101 Identities=19% Similarity=0.183 Sum_probs=71.1
Q ss_pred cceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhh------hhcceeEeeecCCCCCCCCCccEEEe
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSFPLVIV 162 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLPYR~kSFslVIV 162 (227)
-.+||.+|-.+......|.+... .+.+|||+.+ ++.+..+++..- .+=-+..+|+ .-+|....+|++|+.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAATV 108 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEEE
Confidence 45999999999999888887654 6889998753 222333322110 0223455677 346777789999999
Q ss_pred cccccccChhhhccccccchhhccC-ceEEEe
Q 027139 163 SDALDYLSPKYLNKTLPDLARVASD-GVLIFA 193 (227)
Q Consensus 163 SDaLDyLspryLNkTLPeLaRvsad-glViF~ 193 (227)
++.+.|+++..+.+.|-++.|+-.. |++|++
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 109 IEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 9999999988888888899888665 444444
No 2
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.24 E-value=0.00025 Score=54.18 Aligned_cols=102 Identities=16% Similarity=0.269 Sum_probs=74.3
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.-.+||.+|-.+......|++....+..|||+-+ ++-+..+++.. .+--+..+|+. .+|+...+|++|+.++.|.|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASME-TATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHH-HCCCCCCCeEEEEEcchhhh
Confidence 4568999999999988888877656678887542 33344444332 12234456664 36777889999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+++..+.+.|-++.|+-. +|.++++-
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 998888899999998755 67777765
No 3
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.19 E-value=0.00026 Score=52.53 Aligned_cols=115 Identities=17% Similarity=0.253 Sum_probs=80.0
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCC
Q 027139 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 154 (227)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~ 154 (227)
+.+.+-.+...- .-.+||.+|..+......++.+...+..|||+.+ ++.+..+++..-.+--+..+|+. .+|+..
T Consensus 11 ~~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 87 (209)
T 2p8j_A 11 LYRFLKYCNESN--LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKD 87 (209)
T ss_dssp HHHHHHHHHHSS--SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCT
T ss_pred HHHHHHHHhccC--CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCC
Confidence 445555554332 2358999999988876666677777888888653 33344444332222235567774 467778
Q ss_pred CCccEEEecccccccChhhhccccccchhhcc-CceEEEec
Q 027139 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 155 kSFslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
.+|++|+.++.+.|+++....+.+-++.|+-. +|.++++-
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 89999999999999998889999999998755 56777665
No 4
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.18 E-value=0.001 Score=50.29 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=70.9
Q ss_pred cceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhh------hhcceeEeeecCCCCCCCCCccEEEe
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSFPLVIV 162 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLPYR~kSFslVIV 162 (227)
-.+||.+|..+......|.+... .+.+|||+.+ ++.+..+++..- .+--+..+|+. -++....+|++|+.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEEee
Confidence 35999999999998888877643 6888988753 222333322100 02234456763 34556689999999
Q ss_pred cccccccChhhhccccccchhhcc-CceEEEec
Q 027139 163 SDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 163 SDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
++++.|+++..+.+.|-++.|+-. +|++|++-
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 109 IEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999999998888889999998755 56555553
No 5
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.11 E-value=0.00074 Score=48.63 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=70.4
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEec-cccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 169 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVS-DaLDyL 169 (227)
.-.+||.+|..+......|.+. ..+..|+|+.+ ++-..++....+--+..+|+.- +|....+|++|+.+ +.+.|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDP--ILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCH--HHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 4568999999998887777766 56778887643 1222222222233345566643 45667899999998 899999
Q ss_pred Chhhhccccccchhhcc-CceEEEecC
Q 027139 170 SPKYLNKTLPDLARVAS-DGVLIFAGY 195 (227)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~ 195 (227)
++..+.+.|-++.|+-. +|.++++-.
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 98888889999988754 566666543
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.99 E-value=0.00079 Score=50.07 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=72.4
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccCh
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLsp 171 (227)
-.+||.+|-.+......|.+. ..+.+|||+.+ +.-..++....+--+..+|+. .+|+...+|++|+.++++.++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPAT--RLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCH--HHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCCH
Confidence 468999999999887777766 56899998753 222233332223335566763 46777899999999999999998
Q ss_pred hhhccccccchhhcc-CceEEEec
Q 027139 172 KYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G 194 (227)
..+.+.|-++.|+-. +|.++++-
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 888999999999765 56666654
No 7
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.99 E-value=0.00062 Score=52.51 Aligned_cols=102 Identities=12% Similarity=0.097 Sum_probs=74.2
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-hhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-VHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsL-VrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
-.+||.+|-.+......|++....+.+|||+-+ ++-+..+++.. ..+--+..+|+. .+|....+|++|+..+++.|
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ-DFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh-hcCCCCCCEEEEEEcchhhh
Confidence 358999999999998888887766888988643 44444444433 122235566753 35566779999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+.+..+.+.|-++.|+-. +|.++++-
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 998777888888888654 67777754
No 8
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.99 E-value=0.0013 Score=49.70 Aligned_cols=97 Identities=22% Similarity=0.335 Sum_probs=66.1
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEec-cccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVS-DaLDyL 169 (227)
.+||.+|..+......|.+. .+..|||+.+ ++-+..+.+..-.+--+..+|+. .+|.. .+|++|+.. |.+.|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCCCS-SCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcCCC-CCcCEEEEeCCchhhc
Confidence 68999999998877777766 7888988753 33344443322112234456663 23333 789999987 699999
Q ss_pred -Chhhhccccccchhh-ccCceEEEe
Q 027139 170 -SPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 170 -spryLNkTLPeLaRv-sadglViF~ 193 (227)
++.-+.+.|-++.|+ ..+|.+++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 677788888888887 456777764
No 9
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.95 E-value=0.0011 Score=50.84 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=74.5
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh--hhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS--LVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs--LVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||-+|-.+......|.+ ...+..|||+.+ ++-+..+++. +..+=-+..+|+.-..| ..+|++|+.+..+.|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEChhhhc
Confidence 4999999999888877765 456788887653 3444444433 11222355677754333 449999999999999
Q ss_pred cChhhhccccccchhh-ccCceEEEecCCCc
Q 027139 169 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQ 198 (227)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~Pgq 198 (227)
++|....+.|-++.|+ ..+|.+++..++..
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 9999999999999994 66788888777654
No 10
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.83 E-value=0.0012 Score=48.18 Aligned_cols=98 Identities=14% Similarity=0.188 Sum_probs=68.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh-hcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
.+||.+|..+-.....|.+. ..+..|||+.+ ++.+..+.+..-- .--+..+|+.- +|+ ..+|++|+.++.+.|+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLMFL 110 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGGGS
T ss_pred CeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhhhC
Confidence 49999999998887777765 56788887643 3334443332111 11244566643 556 8899999999999999
Q ss_pred Chhhhccccccchhhc-cCceEEEe
Q 027139 170 SPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~ 193 (227)
++....+.|-++.|+- .+|.+++.
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9988888999998875 46765554
No 11
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.79 E-value=0.00084 Score=51.76 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=73.8
Q ss_pred hHHHHHhcc-ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCcc
Q 027139 82 PILKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 82 P~LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFs 158 (227)
+.|.+..+. .-.+||-+|..+......|.+....+..|||+.+ ++.+..+++ ..+--+..+|+. .+|+...+|+
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~-~~~~~~~~fD 110 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIE-DIAIEPDAYN 110 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGG-GCCCCTTCEE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchh-hCCCCCCCeE
Confidence 344444443 4468999999999888888877655888988653 222333332 112234567774 5777789999
Q ss_pred EEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027139 159 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
+|+.++++.++ ..+.+.|-++.|+ ..+|.++++
T Consensus 111 ~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEE
Confidence 99999999999 3467788888885 456777775
No 12
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.71 E-value=0.0012 Score=50.52 Aligned_cols=102 Identities=20% Similarity=0.184 Sum_probs=69.4
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.-.+||.+|..|-.....|.+. ..+..|||+.+ ++.+..+++....+--+..+|+ ..+|+...+|++|+.++++.+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchhh
Confidence 3468999999998877777765 56788888753 2223333211112223456777 467888889999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEecCCC
Q 027139 169 LSPKYLNKTLPDLARVA-SDGVLIFAGYPG 197 (227)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G~Pg 197 (227)
+. ...+.|.++.|+- .+|.++++ ++.
T Consensus 117 ~~--~~~~~l~~~~~~L~pgG~l~~~-~~~ 143 (263)
T 2yqz_A 117 VP--DWPKVLAEAIRVLKPGGALLEG-WDQ 143 (263)
T ss_dssp CT--THHHHHHHHHHHEEEEEEEEEE-EEE
T ss_pred cC--CHHHHHHHHHHHCCCCcEEEEE-ecC
Confidence 96 2456778888875 46777776 443
No 13
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.59 E-value=0.0052 Score=46.13 Aligned_cols=103 Identities=19% Similarity=0.311 Sum_probs=69.2
Q ss_pred hccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecc-
Q 027139 88 YGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSD- 164 (227)
Q Consensus 88 YGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSD- 164 (227)
++..-.+||.+|..+......|.+. ..+..|||+.+ ++-+..+++..-.+--+..+|+. .+|.. .+|++||.+.
T Consensus 34 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~ 110 (246)
T 1y8c_A 34 NNLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLNIN-RKFDLITCCLD 110 (246)
T ss_dssp TTCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCCCS-CCEEEEEECTT
T ss_pred hCCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCCcc-CCceEEEEcCc
Confidence 3445579999999999988877766 45788887643 23333333321102234456663 23433 8899999996
Q ss_pred ccccc-Chhhhccccccchhhc-cCceEEEe
Q 027139 165 ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 165 aLDyL-spryLNkTLPeLaRvs-adglViF~ 193 (227)
++.|+ ++..+.+.|-++.|+- .+|.++++
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999 6678888899999875 46777764
No 14
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.55 E-value=0.0028 Score=50.01 Aligned_cols=101 Identities=11% Similarity=0.084 Sum_probs=70.7
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.-.+||.+|-.+-.....|.+. ..+..|||+-+ ++-+..+++..--+--+..+|+.-. |. ..+|++|+.+..+.|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA-NI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC-CC-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc-cc-cCCccEEEEccchhh
Confidence 3468999999998877777666 55888887643 3334444432211223455676532 33 889999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+++..+.+.|.++.|+-. +|.+++..
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999999999988754 67655544
No 15
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.42 E-value=0.006 Score=47.40 Aligned_cols=111 Identities=16% Similarity=0.181 Sum_probs=75.6
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCC
Q 027139 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKS 156 (227)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kS 156 (227)
....+..|++... .-.+||.+|-.+......|.+. ..+..|||+.+ ++-..++....+--+..+|+.- +|. ..+
T Consensus 37 ~~~~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~ 110 (263)
T 3pfg_A 37 AADLAALVRRHSP-KAASLLDVACGTGMHLRHLADS-FGTVEGLELSA--DMLAIARRRNPDAVLHHGDMRD-FSL-GRR 110 (263)
T ss_dssp HHHHHHHHHHHCT-TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-CCC-SCC
T ss_pred HHHHHHHHHhhCC-CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhCCCCEEEECChHH-CCc-cCC
Confidence 3344455554433 3468999999999888888776 45788887642 2333333333333455677743 455 789
Q ss_pred ccEEEecc-ccccc-Chhhhccccccchhhc-cCceEEEe
Q 027139 157 FPLVIVSD-ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 157 FslVIVSD-aLDyL-spryLNkTLPeLaRvs-adglViF~ 193 (227)
|++|+.+. .+.|+ +|..+.+.|-++.|+- .+|.+++.
T Consensus 111 fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 111 FSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999996 99999 5677888889998875 56777775
No 16
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.41 E-value=0.002 Score=48.35 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=70.3
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccChh
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 172 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLspr 172 (227)
.+||.+|..+......|.+. ..+..|||+.+ +.-..++... .--+..+|+. .+| ...+|++|+.++.|.|+.+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAA-GFDVDATDGSP--ELAAEASRRL-GRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHH-TSCCEECCGG-GCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHc-CCeEEEECCCH--HHHHHHHHhc-CCceEEeeec-cCC-CCCcEEEEEecCchhhcCHH
Confidence 58999999999988777766 55788887643 2222233222 2234566664 345 67899999999999999988
Q ss_pred hhccccccchhhcc-CceEEEecCC
Q 027139 173 YLNKTLPDLARVAS-DGVLIFAGYP 196 (227)
Q Consensus 173 yLNkTLPeLaRvsa-dglViF~G~P 196 (227)
.+.+.|-++.|+-. +|.++++-.+
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 88999999999765 5666666433
No 17
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.39 E-value=0.0058 Score=45.99 Aligned_cols=110 Identities=15% Similarity=0.277 Sum_probs=73.5
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCcc
Q 027139 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFs 158 (227)
.....|++.. ..-.+||.+|..+......|.+... +..|+|+.+ +.-..++....+--+..+|+. .+|. ..+|+
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D 102 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSE--DMLTHARKRLPDATLHQGDMR-DFRL-GRKFS 102 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCH--HHHHHHHHHCTTCEEEECCTT-TCCC-SSCEE
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCH--HHHHHHHHhCCCCEEEECCHH-Hccc-CCCCc
Confidence 3444555543 4456899999999988888776644 788877642 122223322223345566764 3455 78999
Q ss_pred EEE-eccccccc-Chhhhccccccchhhc-cCceEEEec
Q 027139 159 LVI-VSDALDYL-SPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 159 lVI-VSDaLDyL-spryLNkTLPeLaRvs-adglViF~G 194 (227)
+|+ ..+++.|+ +|..+.+.|-++.|+- .+|.++++-
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999 56799998 5678888888888874 567787763
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.37 E-value=0.0013 Score=50.22 Aligned_cols=101 Identities=21% Similarity=0.244 Sum_probs=73.4
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
-.+||.+|-.+......|.+.-..+..|||+.+ ++-+..+++.. .+=-+..+|+.- +|+...+|++|+..+++.++
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILT-KEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTT-CCCCTTCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECcccc-CCCCCCcEEEEeHHHHHHhc
Confidence 358999999998888888776567888887654 22233332222 122245567643 47778999999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEec
Q 027139 170 SPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G 194 (227)
++....+.|-++.|+-. +|.++++.
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999999999765 56777765
No 19
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.36 E-value=0.002 Score=47.72 Aligned_cols=98 Identities=21% Similarity=0.378 Sum_probs=68.3
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeec-CCCCCCCCCccEEEecccccc
Q 027139 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIK-FPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIk-fpLPYR~kSFslVIVSDaLDy 168 (227)
..-.+||.+|..+-.....|.+. ..+..|+|+.+ ++-..++... .-+..+|+. +.+|+...+|++|+.++.+.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~--~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFP--EAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSH--HHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 34468999999999888888877 57888887643 1112222211 135567774 457888899999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEec
Q 027139 169 LSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G 194 (227)
+... .+.|-++.|+- .+|.++++-
T Consensus 106 ~~~~--~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 106 LFDP--WAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp SSCH--HHHHHHTGGGEEEEEEEEEEE
T ss_pred cCCH--HHHHHHHHHHcCCCCEEEEEe
Confidence 9643 46777777764 467777653
No 20
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.35 E-value=0.0019 Score=49.05 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=69.2
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
.-.+||.+|..+......|.+.- ..+..|||+.+ ++.+..+++..- +--+..+|+. .+|.. .+|++|+.++.+.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYS-KYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTT-TCCCC-SCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchh-ccCCC-CCceEEEEeCccc
Confidence 34789999999998888777664 67888888743 223333332211 2224456653 23444 8999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (227)
++++.-..+.|-++.|+- .+|.++++-
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 998777667888888864 467777654
No 21
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.35 E-value=0.0027 Score=48.69 Aligned_cols=98 Identities=12% Similarity=0.154 Sum_probs=71.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||-+|..+......|.+....+..|||+.+ ++-+..+++..--. =-+..+|+ ..+|+...+|++|+...++.+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhh
Confidence 48999999999888888877666889998754 44455555443211 23566788 677888899999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEec
Q 027139 169 LSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G 194 (227)
+.+ .+.|-++.|+- .+|.++++.
T Consensus 127 ~~~---~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 127 IGF---ERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CCH---HHHHHHHHTTEEEEEEEEEEE
T ss_pred cCH---HHHHHHHHHHcCCCcEEEEEE
Confidence 954 56778888854 567777664
No 22
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.28 E-value=0.002 Score=46.08 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=75.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
-.+||.+|..+..+...|.+ ...+..|+|+.+ ++-+..+++..- .+=-+..+|+.-+ +...+|++|+..+.
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~i~~~~~--- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--LDKLEFNKAFIGGT--- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH--GGGCCCSEEEECSC---
T ss_pred CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc--ccCCCCcEEEECCc---
Confidence 35899999999888877777 777888888653 344444444321 1112345666544 44579999999887
Q ss_pred cChhhhccccccchhhccCceEEEec-CCCccchhhhhhcccCCcc
Q 027139 169 LSPKYLNKTLPDLARVASDGVLIFAG-YPGQQRAKVAELSKFGRPV 213 (227)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~G-~PgqqrakvaelsKfGrpa 213 (227)
..+.+.+.++.|+ .+|.++++. .+.+...-...+.+.|.-.
T Consensus 110 ---~~~~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK-KINHIVANTIVLENAAKIINEFESRGYNV 151 (183)
T ss_dssp ---SCHHHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred ---ccHHHHHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcCCeE
Confidence 4556778889999 999999887 4555455556667777433
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.27 E-value=0.007 Score=43.53 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=68.3
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhh-cceeEeeecCCCCCCCCCccEEEecccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-GIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrK-GiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.-.+||-+|..+......+.+.- ..+.+|+|+.+ ++-+..+++..--. .++..+|..-++|.-..+|++|+.+..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 34589999999988877777663 67889998765 45555555543222 2344466655666655899999999888
Q ss_pred cccChhhhccccccchh-hccCceEEEecCCC
Q 027139 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (227)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~Pg 197 (227)
.+ .+.+.++.| +..+|.+++....-
T Consensus 105 ~~------~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 105 TA------PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp TC------TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred cH------HHHHHHHHHhcCCCCEEEEEeecc
Confidence 77 445556666 45678888877543
No 24
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.13 E-value=0.0064 Score=45.42 Aligned_cols=115 Identities=26% Similarity=0.276 Sum_probs=76.1
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCC
Q 027139 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 154 (227)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~ 154 (227)
.+..++.+.+.... -.+||.+|..+-.....|.+.. .+..|||+-+ ++.+..+++..-.+--+..+|+. .+|+..
T Consensus 25 ~~~~~~~l~~~~~~-~~~vLDlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 101 (227)
T 1ve3_A 25 IETLEPLLMKYMKK-RGKVLDLACGVGGFSFLLEDYG-FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLSFED 101 (227)
T ss_dssp HHHHHHHHHHSCCS-CCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCCSCT
T ss_pred HHHHHHHHHHhcCC-CCeEEEEeccCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-cCCCCC
Confidence 34445556555544 4689999999987766665554 4888888642 33344444332222234566764 356667
Q ss_pred CCccEEEecccccccChhhhccccccchhhcc-CceEEEec
Q 027139 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 155 kSFslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
.+|++|+..+.+.+....-..+.|.++.|+-. +|.+++.-
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 89999999999888887777788888888654 56666653
No 25
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.12 E-value=0.0063 Score=45.56 Aligned_cols=99 Identities=19% Similarity=0.275 Sum_probs=68.5
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
.-.+||.+|..+......|.+. ..+..|||+.+- .-..++.... +--+..+|+. .+|.. .+|++|+..+.+.++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSRE--MRMIAKEKLPKEFSITEGDFL-SFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHH--HHHHHHHHSCTTCCEESCCSS-SCCCC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHH--HHHHHHHhCCCceEEEeCChh-hcCCC-CCeEEEEECcchhcC
Confidence 4468999999999887777765 668889887531 2222222222 3335556663 24544 999999999999999
Q ss_pred Chhhhccccccchhhc-cCceEEEec
Q 027139 170 SPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G 194 (227)
.....-+.|-++.|+- .+|.++++-
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 8876555788888875 467777763
No 26
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.09 E-value=0.0064 Score=45.56 Aligned_cols=111 Identities=19% Similarity=0.255 Sum_probs=73.9
Q ss_pred hhhhHHHHHhc-cccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCC
Q 027139 79 RAIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAK 155 (227)
Q Consensus 79 ~aiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~k 155 (227)
+...++..... ..-.+||-+|..+-.....|.+.. .+.+|||+.+ ++.+..+++..- +=-+..+|+.-.. -..
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~--~~~ 113 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFS--TAE 113 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCC--CSC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCC--CCC
Confidence 33344444433 234689999999998887777664 6888888753 333444333211 1134566764433 368
Q ss_pred CccEEEecccccccC-hhhhccccccchhhcc-CceEEEe
Q 027139 156 SFPLVIVSDALDYLS-PKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 156 SFslVIVSDaLDyLs-pryLNkTLPeLaRvsa-dglViF~ 193 (227)
+|++|+.++.+.|+. |..+.+.|.++.|+-. +|.++|+
T Consensus 114 ~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 114 LFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp CEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999999999998 6778888999998765 5566664
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.04 E-value=0.0031 Score=48.56 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=67.5
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCC-CCCCCCCccEEEecccccccCh
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP-LPYRAKSFPLVIVSDALDYLSP 171 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfp-LPYR~kSFslVIVSDaLDyLsp 171 (227)
.+||.||-.+......|.+. ..+..||++.+ +.-..|+.. --+..+|+.-. .|+...+|++|+.++.+.++.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-GIESIGVDINE--DMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-TCCEEEECSCH--HHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHhC-CCcEEEEECCH--HHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 58999999998887666554 66788887743 222223322 11233444332 2677899999999999999999
Q ss_pred hhhccccccchhhcc-CceEEEec
Q 027139 172 KYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G 194 (227)
..+.+.|-++.|+-. +|.++++-
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 899999999999766 55666654
No 28
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.98 E-value=0.0088 Score=45.12 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=66.3
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh--cceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
-.+||.+|..+......|.+....+..|||+-+ +.-..++....+ --+..+|+.- +|+...+|++|+.++.+.++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE--KMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH--HHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEecccccc
Confidence 458999999998888877776544888888652 222223322222 1244566643 56668899999999999998
Q ss_pred Chhhhccccccchhhc-cCceEEEec
Q 027139 170 SPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G 194 (227)
. .+.+.|-++.|+- .+|.++++-
T Consensus 121 ~--~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 121 E--DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--hHHHHHHHHHHhcCcCcEEEEEe
Confidence 5 3557777888764 467777653
No 29
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=95.96 E-value=0.01 Score=45.28 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=68.4
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-----------------------------hhhc-
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-----------------------------VHKG- 139 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsL-----------------------------VrKG- 139 (227)
-.+||.+|-.+-.....|.+....+..|+++-+ ++.+..+++.. ++..
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v 136 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAI 136 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHE
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhh
Confidence 358999999996554444444434778887643 23333332211 0000
Q ss_pred -ceeEeeecCCCCCCC---CCccEEEecccccccChh--hhccccccchhh-ccCceEEEecCC
Q 027139 140 -IVRVADIKFPLPYRA---KSFPLVIVSDALDYLSPK--YLNKTLPDLARV-ASDGVLIFAGYP 196 (227)
Q Consensus 140 -iVRvADIkfpLPYR~---kSFslVIVSDaLDyLspr--yLNkTLPeLaRv-sadglViF~G~P 196 (227)
-+..+|+.-..|.-+ .+|++||.+.+|.++.|. ...+.|-++.|+ ..+|.+|++...
T Consensus 137 ~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 137 KQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred eeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 256678876656555 899999999999988776 677788888886 457788887643
No 30
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=95.95 E-value=0.0037 Score=46.60 Aligned_cols=100 Identities=16% Similarity=0.300 Sum_probs=69.3
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---------eeEeeecCCCCCCCCCccEE
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---------VRVADIKFPLPYRAKSFPLV 160 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---------VRvADIkfpLPYR~kSFslV 160 (227)
.-.+||.+|..+..+...|.+. ..+..|+|+-+ ++-..++...+ .|+ +..+|+. .+|+...+|++|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v 105 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINS--EAIRLAETAARSPGLNQKTGGKAEFKVENAS-SLSFHDSSFDFA 105 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHTTCCSCCSSSSCEEEEEECCTT-SCCSCTTCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCccccCcceEEEEeccc-ccCCCCCceeEE
Confidence 3458999999999888777766 56788887642 12222232222 232 4456664 467778999999
Q ss_pred EecccccccC-hhhhccccccchhhc-cCceEEEec
Q 027139 161 IVSDALDYLS-PKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 161 IVSDaLDyLs-pryLNkTLPeLaRvs-adglViF~G 194 (227)
+.++.+.++. |...-+.|.++.|+- .+|.++++.
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9999999994 676667888888865 467777764
No 31
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.92 E-value=0.016 Score=42.47 Aligned_cols=111 Identities=12% Similarity=0.184 Sum_probs=76.2
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc--ceeEeeecCCCCCCCCC
Q 027139 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKS 156 (227)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~kS 156 (227)
+..+.+..+..-.+||.+|..+......|.+....+..|+|+.+ ++.+..+++..--.. -+..+|+. .+|+...+
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 111 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNY 111 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCccc
Confidence 34445555544449999999999988888877677888888643 333444443322111 23556763 46777899
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
|++|+.++.+.|+ ....+.|.++.|+- .+|.++++.
T Consensus 112 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 112 ADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999999999998 34567788888864 567777764
No 32
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=95.92 E-value=0.02 Score=44.24 Aligned_cols=111 Identities=21% Similarity=0.279 Sum_probs=74.4
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeEeeecCCCCCCCCC
Q 027139 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKS 156 (227)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kS 156 (227)
..|.++..--..-.+||.||-.+......|.+.. .+..|||+.+ ++.+..+++..- .+=-+..+|+. .+|+...+
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~ 87 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SLPFPDDS 87 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BCCSCTTC
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc-cCCCCCCc
Confidence 3455555555566789999999987766666554 4788888653 333333332211 11124567764 57888899
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
|++|+.++++.++. ...+.|.++.|+- .+|.++++.
T Consensus 88 fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 88 FDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999999999985 3467788888875 467777764
No 33
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.88 E-value=0.0035 Score=46.08 Aligned_cols=103 Identities=17% Similarity=0.222 Sum_probs=69.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.-.+||.+|..+......|++....+..|+|+.+ ++-+..+++.. .+--+..+|+.- +|+...+|++||....+++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRK-LDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTS-CCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhc-CCCCCCcccEEEECcchhh
Confidence 3468999999998888778777555788887542 33344443321 123456677643 4777889999999999998
Q ss_pred cC-------------hhhhccccccchhhc-cCceEEEecC
Q 027139 169 LS-------------PKYLNKTLPDLARVA-SDGVLIFAGY 195 (227)
Q Consensus 169 Ls-------------pryLNkTLPeLaRvs-adglViF~G~ 195 (227)
+. .....+.|-++.|+- .+|.+++..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 86 445567777777765 4566666553
No 34
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.81 E-value=0.0088 Score=46.87 Aligned_cols=105 Identities=23% Similarity=0.239 Sum_probs=72.9
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCcc
Q 027139 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFs 158 (227)
..++++.-. .-.+||.+|..+......|.+. ..+.+|||+.+ ++-+..+++ +.+..+|+. .+|+...+|+
T Consensus 45 ~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~~~~~~d~~-~~~~~~~~fD 116 (260)
T 2avn_A 45 GSFLEEYLK-NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----KNVVEAKAE-DLPFPSGAFE 116 (260)
T ss_dssp HHHHHHHCC-SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----SCEEECCTT-SCCSCTTCEE
T ss_pred HHHHHHhcC-CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----CCEEECcHH-HCCCCCCCEE
Confidence 344444333 4568999999998887777765 56888988653 233333322 347778875 4677788999
Q ss_pred EEEecccccccChhhhccccccchhhcc-CceEEEec
Q 027139 159 LVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+|+.++.+.++.+. ..+.|-++.|+-. +|.++++-
T Consensus 117 ~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 117 AVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEe
Confidence 99998877777655 7788888888765 56776654
No 35
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=95.78 E-value=0.0082 Score=45.43 Aligned_cols=109 Identities=20% Similarity=0.249 Sum_probs=71.6
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh-c-ceeEeeecCCCCCCCCC
Q 027139 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-IVRVADIKFPLPYRAKS 156 (227)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrK-G-iVRvADIkfpLPYR~kS 156 (227)
..++.+++.-. .-.+||.+|..+-.....|.+. ..+..|||+-+ ++-..++..... + -+..+|+. .+|+...+
T Consensus 42 ~~~~~l~~~~~-~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~ 116 (242)
T 3l8d_A 42 TIIPFFEQYVK-KEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISE--VMIQKGKERGEGPDLSFIKGDLS-SLPFENEQ 116 (242)
T ss_dssp THHHHHHHHSC-TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHTTTCBTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHHHHcC-CCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhcccCCceEEEcchh-cCCCCCCC
Confidence 45566665544 3358999999998877777766 56788887643 222223322111 1 23456664 46777899
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEec
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
|++|+..+.+.++. ...+.|-++.|+-. +|.++++-
T Consensus 117 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 117 FEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEE
Confidence 99999999999984 33467888888755 56666654
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.77 E-value=0.0036 Score=49.24 Aligned_cols=99 Identities=11% Similarity=0.133 Sum_probs=69.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||.||-.+-.....|.++-..+..||++-+ ++-+..+++..- .+--+..+|+. .+| .+|++|+..+++.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE-QFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG-GCC---CCCSEEEEESCGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh-hCC---CCeeEEEEeCchh
Confidence 358999999998888777766556888887642 233333333211 11124567773 566 8999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
++.+....+.|-++.|+-. +|.++++-
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998888899999999754 66666654
No 37
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.71 E-value=0.01 Score=44.37 Aligned_cols=99 Identities=19% Similarity=0.171 Sum_probs=69.9
Q ss_pred ceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhh-hcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
.+||.+|..+......|.+.. +.+.+|||+.+ ++.+..+++..-- +--+..+|+ ..+|+...+|++|+.++.+.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhhh
Confidence 489999999998888888765 57899998643 3444444433211 122455666 35677788999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (227)
++. ...+.|-++.|+- .+|.++++.
T Consensus 118 ~~~--~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 118 ELS--EPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp GCS--SHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC--CHHHHHHHHHHHhCCCeEEEEEE
Confidence 994 3467778888764 467888765
No 38
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=95.64 E-value=0.018 Score=47.15 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=81.3
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc---cccccccccccc--ccchhHHHHhhhhhcce--eEeeec
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEPYD--IEDADARCKSLVHKGIV--RVADIK 147 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE---eetEAWGVEPyd--iedad~~CKsLVrKGiV--RvADIk 147 (227)
.|+++.|-.|-+.|-..=.+||-+|-.|-...-.|++. ...+..||++.+ |+-|..+++..-...-| ..+|+.
T Consensus 54 ~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 54 SNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 35566666677777666679999999888776666543 455778887654 55566666544322333 346763
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027139 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 148 fpLPYR~kSFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
.+|+ .+|++|+...+|.|+.|....+.|-++.|+ ...|.+|++
T Consensus 134 -~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 134 -DIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -TCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 4565 469999999999999998877889999886 556777765
No 39
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.013 Score=46.77 Aligned_cols=106 Identities=8% Similarity=0.134 Sum_probs=75.6
Q ss_pred HHHHHhccccceeeeecCCcchhhhhccc--ccccccccccccc--ccchhHHHHhh---hhhcceeEeeecCCCCCCC-
Q 027139 83 ILKKAYGDSMHKVLHVGPDTCSVVSTLLK--EEETEAWGVEPYD--IEDADARCKSL---VHKGIVRVADIKFPLPYRA- 154 (227)
Q Consensus 83 ~LkkaYGdsM~kVLHVGPdtC~VVs~LLk--EeetEAWGVEPyd--iedad~~CKsL---VrKGiVRvADIkfpLPYR~- 154 (227)
.|.+.....-.+||-||-.+-.....|.+ ....+..||++.+ ++-+..+++.. ..+=-+..+|+. -+|+..
T Consensus 28 ~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~ 106 (299)
T 3g5t_A 28 MIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGA 106 (299)
T ss_dssp HHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCT
T ss_pred HHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCcccc
Confidence 34443345667999999999988888886 5678899998754 44455555543 223335567774 345555
Q ss_pred -----CCccEEEecccccccChhhhccccccchhhcc-CceEEE
Q 027139 155 -----KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIF 192 (227)
Q Consensus 155 -----kSFslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF 192 (227)
.+|++|+.+.++.|+ ...+.|.++.|+-. +|.+++
T Consensus 107 ~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 DSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 799999999999999 56688888888654 567766
No 40
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=95.60 E-value=0.014 Score=43.62 Aligned_cols=96 Identities=23% Similarity=0.296 Sum_probs=65.3
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLs 170 (227)
.-.+||.+|..+......| ...+.+|||+.+ ++-..++....+--+..+|+. .+|+...+|++|+.++.++++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSE--AMLAVGRRRAPEATWVRAWGE-ALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCH--HHHHHHHHHCTTSEEECCCTT-SCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcccc-cCCCCCCcEEEEEEcChhhhcC
Confidence 4568999999998877766 223778887653 122222222222334556664 4678888999999999999996
Q ss_pred hhhhccccccchhhcc-CceEEEec
Q 027139 171 PKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 171 pryLNkTLPeLaRvsa-dglViF~G 194 (227)
...+.|-++.|+-. +|.++++.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEe
Confidence 34577888888754 67777765
No 41
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.58 E-value=0.013 Score=42.22 Aligned_cols=94 Identities=12% Similarity=0.125 Sum_probs=66.6
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccCh
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLsp 171 (227)
=.+||.+|..+......|.+... +..|||+.+ +.-..++....+=-+..+| +|+...+|++|+.++.+.++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~--~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINV--IALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE-EEEEECSCH--HHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS-
T ss_pred CCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCH--HHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc-
Confidence 35899999999988888887765 888988753 2333333332222334455 777788999999999999994
Q ss_pred hhhccccccchhhc-cCceEEEec
Q 027139 172 KYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 172 ryLNkTLPeLaRvs-adglViF~G 194 (227)
...+.|-++.|+- .+|.++++.
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEE
Confidence 3456777887764 467777775
No 42
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.39 E-value=0.016 Score=42.75 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=67.7
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc----ceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKG----iVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||.+|..+..+...|.+. ..+..|||+.+ +.-..++. +| -+..+|+.-. ....+|++|+.+.++.|
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~--~~~~~a~~---~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-ADRVTALDGSA--EMIAEAGR---HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-SSEEEEEESCH--HHHHHHGG---GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGG
T ss_pred CeEEEECCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHh---cCCCCeEEEecccccC--CCCCceeEEEEechhhc
Confidence 38999999998877777665 56888887643 12222322 33 2445666433 56789999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+.+..+.+.|-++.|+-. +|.++++.
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 998878888999888765 56666664
No 43
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.39 E-value=0.028 Score=44.20 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=69.6
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLs 170 (227)
.-.+||-+|-.|-.....|.+ ...+..||++.+ ..-..++... +--+.++|+. .+|+...+|++|+...++.++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~- 107 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSI--VMRQQAVVHP-QVEWFTGYAE-NLALPDKSVDGVISILAIHHF- 107 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCH--HHHHSSCCCT-TEEEECCCTT-SCCSCTTCBSEEEEESCGGGC-
T ss_pred CCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCH--HHHHHHHhcc-CCEEEECchh-hCCCCCCCEeEEEEcchHhhc-
Confidence 457899999999888777776 567899998765 1111111111 2234557774 478888999999999999998
Q ss_pred hhhhccccccchhhccCc-eEEEecCCC
Q 027139 171 PKYLNKTLPDLARVASDG-VLIFAGYPG 197 (227)
Q Consensus 171 pryLNkTLPeLaRvsadg-lViF~G~Pg 197 (227)
....+.|-++.|+-.+| ++|++-.|.
T Consensus 108 -~~~~~~l~~~~~~LkgG~~~~~~~~~~ 134 (261)
T 3ege_A 108 -SHLEKSFQEMQRIIRDGTIVLLTFDIR 134 (261)
T ss_dssp -SSHHHHHHHHHHHBCSSCEEEEEECGG
T ss_pred -cCHHHHHHHHHHHhCCcEEEEEEcCCc
Confidence 45567888888887777 555554443
No 44
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.39 E-value=0.016 Score=46.29 Aligned_cols=106 Identities=13% Similarity=0.140 Sum_probs=72.1
Q ss_pred HHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh----hhcceeEeeecCCCCCCCCCcc
Q 027139 85 KKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV----HKGIVRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 85 kkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV----rKGiVRvADIkfpLPYR~kSFs 158 (227)
.+..+..-.+||-+|-.+......|.+. ..+..|||+-+ ++-+..++...- .+=-+..+|+.- +|+ ..+|+
T Consensus 76 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD 152 (299)
T 3g2m_A 76 ATRTGPVSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFG 152 (299)
T ss_dssp HHHHCCCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEE
T ss_pred HHhhCCCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcC
Confidence 3344443349999999999988888776 56788887643 233333332210 111256777753 555 78999
Q ss_pred EEEec-ccccccChhhhccccccchhhcc-CceEEEe
Q 027139 159 LVIVS-DALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 159 lVIVS-DaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (227)
+||.+ ..+.|++|..+.+.|-++.|+-. +|.++|+
T Consensus 153 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 153 TVVISSGSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp EEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99965 88999999889999999999765 5565554
No 45
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.32 E-value=0.011 Score=47.45 Aligned_cols=99 Identities=8% Similarity=0.120 Sum_probs=67.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||.+|-.+-.....|.+.-..+..|||+-+ ++-+..+++..- .+--+..+|+. .+| .+|++|+..+++.
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE-DFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG-GCC---CCCSEEEEESCGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH-HCC---CCcCEEEEeChHH
Confidence 358999999997777777765355788887642 233333332210 01123456652 344 7899999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (227)
|+.+..+.+.|-++.|+- .+|.++++-
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999888889999999875 466766654
No 46
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.29 E-value=0.019 Score=45.26 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=71.2
Q ss_pred HHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc-----eeEeeecCCCCCCCCCcc
Q 027139 86 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvADIkfpLPYR~kSFs 158 (227)
+.++..-.+||-+|..+......|.+. ..+..|||+.+ ++-+..+++. .|+ +..+|+.-..++-..+|+
T Consensus 63 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~~~~~~fD 138 (285)
T 4htf_A 63 AEMGPQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEA---KGVSDNMQFIHCAAQDVASHLETPVD 138 (285)
T ss_dssp HHTCSSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC----CCGGGEEEEESCGGGTGGGCSSCEE
T ss_pred HhcCCCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh---cCCCcceEEEEcCHHHhhhhcCCCce
Confidence 334444568999999998887777766 67889998753 3333333332 232 566777554447789999
Q ss_pred EEEecccccccChhhhccccccchhhcc-CceEEEec
Q 027139 159 LVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+|+.++.+.|+.. ..+.|-++.|+-. +|.++++-
T Consensus 139 ~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 139 LILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEE
Confidence 9999999999953 3678888888765 55666553
No 47
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.24 E-value=0.031 Score=43.28 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=67.6
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
.-.+||-||..+-.....|.+.. .+..|+++.+ ++-+..+++..- .+=-+..+|+. .+|+...+|++|+...++.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCCCCCCCEEEEEEhhhhH
Confidence 44689999999888766666554 4888888653 333333332210 11124567774 3677789999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (227)
++. ...+.|.++.|+- .+|.++++.
T Consensus 115 ~~~--d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 115 HFP--NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 985 3357888898875 467887763
No 48
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.22 E-value=0.034 Score=43.19 Aligned_cols=105 Identities=20% Similarity=0.264 Sum_probs=72.7
Q ss_pred HHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-----ceeEeeecCCCCC-CCCCc
Q 027139 86 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-----IVRVADIKFPLPY-RAKSF 157 (227)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-----iVRvADIkfpLPY-R~kSF 157 (227)
+.+-..=.+||.+|..+......|.+....+..|||+.+ ++-+..+.+. .| -+..+|+. .+|+ ...+|
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~-~~~~~~~~~f 134 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARN---MKRRFKVFFRAQDSY-GRHMDLGKEF 134 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHT---SCCSSEEEEEESCTT-TSCCCCSSCE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh---cCCCccEEEEECCcc-ccccCCCCCc
Confidence 344445568999999998887777776666889988653 2333333322 22 23456653 2355 57899
Q ss_pred cEEEecccccc--cChhhhccccccchhhcc-CceEEEec
Q 027139 158 PLVIVSDALDY--LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 158 slVIVSDaLDy--LspryLNkTLPeLaRvsa-dglViF~G 194 (227)
++|+.++++.| .++..+.+.|-++.|+-. +|.++++-
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999998 678888889999998755 56666654
No 49
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=94.87 E-value=0.026 Score=42.11 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=64.0
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcceeEeeecCCCCCCCCCccEEEecccccccCh
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFslVIVSDaLDyLsp 171 (227)
.+||.||..+......|.+.. .+..|||+.+ +.-..++.... +--+..+|+.-. .-..+|++|+.+++|.++..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~--~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHF-NDITCVEASE--EAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTC-SCEEEEESCH--HHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHHhC-CcEEEEeCCH--HHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhcC
Confidence 479999999988877776654 4788887753 12222332222 223455676543 24688999999999999953
Q ss_pred hhhccccccch-hhcc-CceEEEec
Q 027139 172 KYLNKTLPDLA-RVAS-DGVLIFAG 194 (227)
Q Consensus 172 ryLNkTLPeLa-Rvsa-dglViF~G 194 (227)
..+.|-++. |+-. +|.++++-
T Consensus 119 --~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 119 --PVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHhcCCCCEEEEEc
Confidence 257888888 8754 57777655
No 50
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=94.83 E-value=0.026 Score=42.20 Aligned_cols=106 Identities=17% Similarity=0.180 Sum_probs=68.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
-.+||-+|..+......|.+....+.+|+|.-+ ++-+..+++..--.+ -+..+|+. ++-.++|++|+....+++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHH
Confidence 358999999998877776665556888888643 344555554332222 23445553 233589999998766654
Q ss_pred cChhhhccccccchhh-ccCceEEEecCCCccchhhhh
Q 027139 169 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAE 205 (227)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~Pgqqrakvae 205 (227)
+.+.+.++.|+ ..+|.+++++....+...+.+
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 170 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQ 170 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHH
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHH
Confidence 45667777775 567888888765555444433
No 51
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=94.77 E-value=0.022 Score=40.79 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=67.0
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh---cceeEeeecCCCCCCCCCccEEEeccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK---GIVRVADIKFPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK---GiVRvADIkfpLPYR~kSFslVIVSDa 165 (227)
.-.+||.+|..+......+.+. ..+..|+|+-+ ++.+..+++..--. --+..+|+.-+++ ..+|++|+....
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~ 128 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPP 128 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCC
Confidence 3458999999998888888777 77888887543 34444444432111 2344566655544 778999998655
Q ss_pred ccccChhhhccccccchhh-ccCceEEEecCCCcc
Q 027139 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (227)
+.+ ....+.+.+-++.|+ ..+|.++++....+.
T Consensus 129 ~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 129 IRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp STT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred ccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 432 345556667777775 457787777655443
No 52
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=94.71 E-value=0.035 Score=45.47 Aligned_cols=110 Identities=19% Similarity=0.164 Sum_probs=73.2
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccc-cccccchhHHHHhhhh--hcceeEeeecCCCCCCCCC
Q 027139 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVE-PYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKS 156 (227)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVE-Pydiedad~~CKsLVr--KGiVRvADIkfpLPYR~kS 156 (227)
+.+-+.|. ..-.+||.||-.+-.....|++.. +.+..|++ |--++.+..+++..-- +=-+...|+.-++|- .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 249 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---K 249 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS---C
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC---C
Confidence 44445554 334689999999998888887764 45677777 4445555555443211 112345666546663 4
Q ss_pred ccEEEecccccccChhhhccccccchhh-ccCceEEEec
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G 194 (227)
|++|+.++.|.+++.....+.|-++.|+ ..+|.+++.-
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999999999887777778888886 4567666654
No 53
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.69 E-value=0.035 Score=44.73 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=70.4
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--------hhcceeEeeecCCC---CCC--CC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--------HKGIVRVADIKFPL---PYR--AK 155 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--------rKGiVRvADIkfpL---PYR--~k 155 (227)
.-.+||.+|-.|......|++....+..|+++-+ ++.+..+++..- .+--+..+|+.-.. |+. ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 3458999999999998888876666788887643 233333333221 01234567775321 343 45
Q ss_pred CccEEEeccccccc--Chhhhccccccchhhc-cCceEEEec
Q 027139 156 SFPLVIVSDALDYL--SPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 156 SFslVIVSDaLDyL--spryLNkTLPeLaRvs-adglViF~G 194 (227)
+|++|+.+.++.|+ ++..+.+.|-++.|+- .+|++|++-
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 99999999999998 6677788888888864 567777654
No 54
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.67 E-value=0.11 Score=40.35 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=67.9
Q ss_pred ccceeeeecCCcchhhhhccccc--ccccccccccc--------ccchhHHHHhhh--hhcceeEee-e-cCCCCCCCCC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--------IEDADARCKSLV--HKGIVRVAD-I-KFPLPYRAKS 156 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--------iedad~~CKsLV--rKGiVRvAD-I-kfpLPYR~kS 156 (227)
.-.+||-||-.+-.....|.+.- +.+..||++.+ ++.+..+++..- .+=-+..+| + ...+|+...+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCC
Confidence 34589999999998888887763 27899999876 344444443221 111233455 3 3567888899
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEec
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
|++|+..+.+.|+... ..-+-.+.++-. +|.++++-
T Consensus 123 fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 123 FDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEE
Confidence 9999999999998643 223334455555 88888864
No 55
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.57 E-value=0.065 Score=43.92 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=69.4
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCc
Q 027139 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSF 157 (227)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSF 157 (227)
+-.|.+.-+ .-.+||-||-.|-.... .|.+...+..||+|-+ ++.+ +. +.+ -..++|.. .+|+...||
T Consensus 30 ~~~l~~~~~-~~~~vLDvGcGtG~~~~-~l~~~~~~v~gvD~s~~ml~~a----~~--~~~v~~~~~~~e-~~~~~~~sf 100 (257)
T 4hg2_A 30 FRWLGEVAP-ARGDALDCGCGSGQASL-GLAEFFERVHAVDPGEAQIRQA----LR--HPRVTYAVAPAE-DTGLPPASV 100 (257)
T ss_dssp HHHHHHHSS-CSSEEEEESCTTTTTHH-HHHTTCSEEEEEESCHHHHHTC----CC--CTTEEEEECCTT-CCCCCSSCE
T ss_pred HHHHHHhcC-CCCCEEEEcCCCCHHHH-HHHHhCCEEEEEeCcHHhhhhh----hh--cCCceeehhhhh-hhcccCCcc
Confidence 344554433 33579999999876544 4455567899998864 2222 11 112 23445543 467779999
Q ss_pred cEEEecccccccChhhhccccccchhh-ccCceEEEecC
Q 027139 158 PLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 158 slVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
++|+++.++.|+.| .+.+.|++|| ..+|++++.+|
T Consensus 101 D~v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 101 DVAIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEEEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEEC
Confidence 99999999999975 4789999998 45677777664
No 56
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=94.57 E-value=0.081 Score=42.00 Aligned_cols=102 Identities=14% Similarity=0.210 Sum_probs=68.3
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHh-------------h-hhhc---------------
Q 027139 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKS-------------L-VHKG--------------- 139 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKs-------------L-VrKG--------------- 139 (227)
-.+||-||-.|-. .+.++.. ...+..||++.+ ++.+..+++. . ...|
T Consensus 72 ~~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CSEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 3589999998877 5555543 355788888743 2223332221 0 0122
Q ss_pred --ceeEeeecCCCCC-----CCCCccEEEecccccccChh--hhccccccchhhc-cCceEEEec
Q 027139 140 --IVRVADIKFPLPY-----RAKSFPLVIVSDALDYLSPK--YLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 140 --iVRvADIkfpLPY-----R~kSFslVIVSDaLDyLspr--yLNkTLPeLaRvs-adglViF~G 194 (227)
-+..+|+.-++|+ ...+|++|+.+.+|.++.+. .+.+.|.++.|+= ..|.++|++
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1334588766664 34679999999999998876 6888999999975 567888875
No 57
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=94.47 E-value=0.049 Score=43.00 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=70.4
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEecccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.-.+||.||-.+......|.+.-..+..||++.+ ++.+..+++..- .+=-+..+|+. .+|+...+|++|+..+++
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecchh
Confidence 3458999999998888888776456788887643 233444433221 11124456663 578888999999999999
Q ss_pred cccChhhhccccccchhhcc-CceEEEec
Q 027139 167 DYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 167 DyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
.++.. ..+.|-++.|+-. +|.++++.
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEE
Confidence 99976 5788888888754 67777764
No 58
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.35 E-value=0.084 Score=53.34 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=76.5
Q ss_pred ccceeeeecCCcchhhhhcccccc--cccccccccc--ccchhHHHHhhhh---hcc----eeEeeecCCCCCCCCCccE
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLPYRAKSFPL 159 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEee--tEAWGVEPyd--iedad~~CKsLVr---KGi----VRvADIkfpLPYR~kSFsl 159 (227)
.-.+||-||=.+-.....|.+... .+.+||++.+ ++-|..+.+.... .|+ +..+|+. .+|++..+|++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~-dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL-EFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT-SCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH-hCCcccCCeeE
Confidence 346899999999999888887763 6899998865 3334444433221 133 4556664 47888899999
Q ss_pred EEecccccccChhhhccccccchhhccCceEEEe
Q 027139 160 VIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 160 VIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
|+..+++.|+.+..+-+.+.++.|+-..|++|++
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIIS 833 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVS 833 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999998888889999999999955444
No 59
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=94.34 E-value=0.032 Score=43.51 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=70.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||-||..+......|.+....+..|||+.+ ++-+..+++..- .+=-+..+|+ ..+|+...+|++|+...++.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCce
Confidence 358999999999998888888677899998754 334444444321 1123456777 45777789999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (227)
++.+ .+.|-++.|+- .+|.++++.
T Consensus 126 ~~~~---~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 126 NIGF---ERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GTCH---HHHHHHHGGGEEEEEEEEEEE
T ss_pred ecCH---HHHHHHHHHHcCCCCEEEEEE
Confidence 9954 55667777754 456766654
No 60
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.22 E-value=0.044 Score=43.16 Aligned_cols=93 Identities=16% Similarity=0.217 Sum_probs=66.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
-.+||-||-.+-.....|.+ ...+..||++.+ ++.+..++ .+--+.++|+.- +|+ ..+|++|+.+.++.++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARN-FRV-DKPLDAVFSNAMLHWV 130 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTT-CCC-SSCEEEEEEESCGGGC
T ss_pred CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhh-CCc-CCCcCEEEEcchhhhC
Confidence 45899999999888777776 667888988753 22222222 233466778754 666 6899999999999998
Q ss_pred Chhhhccccccchhhcc-CceEEEe
Q 027139 170 SPKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~ 193 (227)
. ...+.|.++.|+-. +|.++++
T Consensus 131 ~--d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 131 K--EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred c--CHHHHHHHHHHhcCCCcEEEEE
Confidence 5 34577888888866 5666664
No 61
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.01 E-value=0.06 Score=40.92 Aligned_cols=126 Identities=13% Similarity=0.177 Sum_probs=75.1
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeEeeecCCCC--CCCCCc
Q 027139 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLP--YRAKSF 157 (227)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLP--YR~kSF 157 (227)
+++.++..-.+||-+|-.+-.....|.+.- +.+..|||..+ ++.+..+++..- .+=-+..+|+.- +| +...+|
T Consensus 34 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~ 112 (214)
T 1yzh_A 34 WRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEI 112 (214)
T ss_dssp HHHHHTSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCC
T ss_pred HHHHcCCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCC
Confidence 446678777899999999988887777664 56889998653 444555554321 111134567653 55 667899
Q ss_pred cEEEecccccccChhhh------ccccccchh-hccCceEEEec-CCCccchhhhhhcccC
Q 027139 158 PLVIVSDALDYLSPKYL------NKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAELSKFG 210 (227)
Q Consensus 158 slVIVSDaLDyLspryL------NkTLPeLaR-vsadglViF~G-~PgqqrakvaelsKfG 210 (227)
++|++.-...+...++- ...+.++.| +..+|.++|.. .+.+...-...+.+.|
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC
Confidence 99987633223222221 234556666 46678888865 3344333334454444
No 62
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=93.97 E-value=0.037 Score=44.75 Aligned_cols=99 Identities=12% Similarity=0.146 Sum_probs=70.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh--hcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||-+|-.+-.....|.+.-..+..|||+.+ ++.+..+++..-- +=-+..+|+. .+|+...+|++|+..+.+.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEECCchh
Confidence 358999999998877777665356788988643 4445555544321 1234567774 5778789999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEec
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~G 194 (227)
++. ..+.|.++.|+- .+|.++++.
T Consensus 197 ~~~---~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 197 YVD---LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp GSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 995 778888888865 456666655
No 63
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.93 E-value=0.05 Score=42.36 Aligned_cols=99 Identities=22% Similarity=0.248 Sum_probs=68.2
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh-hcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||.+|..+......|.+.. ..+..|||+.+ ++.+..+++..-- .=-+..+|+. .+|+...+|++|+.++.+.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEechhh
Confidence 4589999999999888887764 57888988753 3333333332211 1113456765 5677789999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027139 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (227)
++.. .++.|-++.|+-. +|.++++
T Consensus 117 ~~~~--~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 117 HLQS--PEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCcEEEEE
Confidence 9963 3477788888654 5666664
No 64
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.72 E-value=0.073 Score=43.68 Aligned_cols=111 Identities=22% Similarity=0.170 Sum_probs=71.1
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-ccccccccc-ccccchhHHHHhhhhhcce--eEeeecCCCCCCCCC
Q 027139 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGIV--RVADIKFPLPYRAKS 156 (227)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEP-ydiedad~~CKsLVrKGiV--RvADIkfpLPYR~kS 156 (227)
+.+-+.|. ..-.+||.||-.+......|++.- ..+..|++. --++.+..+++..--.+-| ...|+--++|. .
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 248 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPV---T 248 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC---C
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC---C
Confidence 44445553 235689999999998888888764 456777763 3333344443322111123 44566446664 4
Q ss_pred ccEEEecccccccChhhhccccccchhh-ccCceEEEecC
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
|++|+.++.|.+++.....+.|-++.|+ ..+|.+++.-.
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999999999999887666777888876 45676665433
No 65
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.62 E-value=0.23 Score=39.82 Aligned_cols=107 Identities=14% Similarity=0.161 Sum_probs=68.4
Q ss_pred hHHHHHhc---cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhc---ce--eEeeecCCCC
Q 027139 82 PILKKAYG---DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKG---IV--RVADIKFPLP 151 (227)
Q Consensus 82 P~LkkaYG---dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKG---iV--RvADIkfpLP 151 (227)
+-+-+.|. ..-.+||.||-.+......|++.- ..+..|++.- ++-..++..+ +.| -| ...|+.- .|
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 228 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA---SVLEVAKENARIQGVASRYHTIAGSAFE-VD 228 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH---HHHHHHHHHHHHHTCGGGEEEEESCTTT-SC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH---HHHHHHHHHHHhcCCCcceEEEeccccc-CC
Confidence 33444554 455799999999998888777663 4567777654 2222232222 222 23 3455532 23
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027139 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 152 YR~kSFslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (227)
. ++.|++|+.++.+.|.++....+.|-++.|+- .+|.+++.
T Consensus 229 ~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 229 Y-GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp C-CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 3 23499999999999999888888888888864 56755554
No 66
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=93.41 E-value=0.048 Score=37.95 Aligned_cols=101 Identities=10% Similarity=0.056 Sum_probs=66.5
Q ss_pred ccceeeeecCCcchhhhhcccc--ccccccccccccccchhHHHHhhhhhcceeEeeecCCCC--------CCCCCccEE
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLP--------YRAKSFPLV 160 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLP--------YR~kSFslV 160 (227)
.-.+||.+|..+......|.+. .+.+..|+|+-++.+. .+--+..+|+.- +| +...+|++|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~--------~~~~~~~~d~~~-~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI--------VGVDFLQGDFRD-ELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC--------TTEEEEESCTTS-HHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc--------CcEEEEEccccc-chhhhhhhccCCCCceeEE
Confidence 3458999999998888777776 2478999988774433 122234556542 22 556899999
Q ss_pred EecccccccChhh---------hccccccchhh-ccCceEEEecCCCccc
Q 027139 161 IVSDALDYLSPKY---------LNKTLPDLARV-ASDGVLIFAGYPGQQR 200 (227)
Q Consensus 161 IVSDaLDyLspry---------LNkTLPeLaRv-sadglViF~G~Pgqqr 200 (227)
+....+.+..-.. ..+.+.++.|+ ..+|.++++.+..++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 142 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGF 142 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTH
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcH
Confidence 9877776654321 14566666665 5578888877655543
No 67
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=93.35 E-value=0.12 Score=38.62 Aligned_cols=85 Identities=19% Similarity=0.242 Sum_probs=59.6
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLs 170 (227)
.-.+||.+|..+......|- .+..|+++.+- .--+..+|+.- +|+...+|++|+.++++.+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~-- 127 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------DPRVTVCDMAQ-VPLEDESVDVAVFCLSLMG-- 127 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------STTEEESCTTS-CSCCTTCEEEEEEESCCCS--
T ss_pred CCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------CceEEEecccc-CCCCCCCEeEEEEehhccc--
Confidence 34589999999988766662 56777776554 12345667643 6777889999999999964
Q ss_pred hhhhccccccchhhc-cCceEEEecC
Q 027139 171 PKYLNKTLPDLARVA-SDGVLIFAGY 195 (227)
Q Consensus 171 pryLNkTLPeLaRvs-adglViF~G~ 195 (227)
..+.+.|-++.|+- .+|.++++-.
T Consensus 128 -~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 128 -TNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 34466777788764 5677777653
No 68
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.23 E-value=0.12 Score=39.56 Aligned_cols=99 Identities=19% Similarity=0.239 Sum_probs=66.2
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEec-cccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALD 167 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVS-DaLD 167 (227)
.-.+||.+|..|......|.+. ..+..|||+-+ ++.+..+++..-.+--+..+|+.- +|.. .+|++|+.. ..+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CCCC-SCEEEEEECSSGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cccC-CCccEEEEcCCchh
Confidence 3468999999998887777765 56788888643 334444443321112244566642 3332 689999976 6778
Q ss_pred ccChhhhccccccchhhc-cCceEEE
Q 027139 168 YLSPKYLNKTLPDLARVA-SDGVLIF 192 (227)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF 192 (227)
|+++..+.+.|.++.|+- .+|++|+
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 888888888899988865 4666665
No 69
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=93.21 E-value=0.067 Score=40.86 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=65.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||-||-.+-.....|.+.-..+..|||+.+ ++.+..+.+..- .+=-+..+|+. .+|+ ..+|++|+..+++.
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVGATW 114 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECCChH
Confidence 358999999998877777665556778887643 344444443221 11224567774 3566 88999999999998
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027139 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (227)
++.. ..+.|-++.|+-. +|.++++
T Consensus 115 ~~~~--~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 115 IAGG--FAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp GTSS--SHHHHHHHTTSEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCeEEEEe
Confidence 8852 4566778888755 5666664
No 70
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=93.18 E-value=0.21 Score=38.65 Aligned_cols=101 Identities=24% Similarity=0.342 Sum_probs=68.1
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEecccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.-.+||.+|-.+-.....|.+.-..+..||++.+ ++-+..+++..- .+--+..+|+. .+|+...+|++|+.++++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DLPFEDASFDAVWALESL 139 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCSCTTCEEEEEEESCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cCCCCCCCccEEEEechh
Confidence 3468999999998887777766567888887643 333444433211 11234456663 467778899999999999
Q ss_pred cccChhhhccccccchhhcc-CceEEEec
Q 027139 167 DYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 167 DyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
.++... .+.|-++.|+-. +|.++++-
T Consensus 140 ~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 140 HHMPDR--GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TTSSCH--HHHHHHHHTTEEEEEEEEEEE
T ss_pred hhCCCH--HHHHHHHHHHcCCCeEEEEEE
Confidence 999533 567778888754 56666654
No 71
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=93.16 E-value=0.11 Score=38.84 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=66.0
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.-.+||.+|-.+......|.+....+..|||..+ ++.+..+++ +--+..+|+.- +| .+|++||....+.+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~-~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE-IS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG-CC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH-CC---CCeeEEEECCCchh
Confidence 3458999999999887777766555688888642 333444433 33456677643 44 78999998877777
Q ss_pred cChhhhccccccchhhccCceEEEecCCCccchhhhhhcccC
Q 027139 169 LSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFG 210 (227)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~G~PgqqrakvaelsKfG 210 (227)
+...-..+.+-++.|+. |.++..-.|+....-...+.+.|
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEEEGGGHHHHHHHHHHHE
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEEcCchHHHHHHHHHHCC
Confidence 76433334566777776 65555556665433333455566
No 72
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.12 E-value=0.37 Score=38.97 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=72.2
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-ccccccccc-ccccchhHHHHhhhhhcce--eEeeecCCCCCCCC
Q 027139 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGIV--RVADIKFPLPYRAK 155 (227)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEP-ydiedad~~CKsLVrKGiV--RvADIkfpLPYR~k 155 (227)
.+.+-+.|+ .. .+||.||..+......|++.- ..+..|++. --++.+..+++..--..-| ...|+--|+| +
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~ 232 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVP---S 232 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC---S
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC---C
Confidence 344555553 23 799999999999888887653 456777765 1133344443322111223 3456544555 6
Q ss_pred CccEEEecccccccChhhhccccccchhh-ccCceEEEec
Q 027139 156 SFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (227)
Q Consensus 156 SFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G 194 (227)
+|++|+.++.|.+.++....+.|-++.|+ ..+|.+++.-
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 89999999999999988877888888876 4577777663
No 73
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=92.85 E-value=0.17 Score=42.44 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=74.1
Q ss_pred hHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh-hc-----ceeEeeecC---CCC
Q 027139 82 PILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKF---PLP 151 (227)
Q Consensus 82 P~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr-KG-----iVRvADIkf---pLP 151 (227)
++++..+...-.+||-||-.|-.....|++.- ..+..|++. +++-..++...+ .| -+...|+-- |+|
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p 246 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL---PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP 246 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC---HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC
T ss_pred HHHHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC---HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC
Confidence 55666666678899999999988888887753 446666653 333333333322 22 234566654 355
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEec
Q 027139 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (227)
Q Consensus 152 YR~kSFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G 194 (227)
++|++|+.+..|.++++...-+.|-++.|+ ..+|.+++.-
T Consensus 247 ---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 247 ---TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ---CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 899999999999999988777788888885 5678777643
No 74
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=92.84 E-value=0.11 Score=38.70 Aligned_cols=99 Identities=20% Similarity=0.177 Sum_probs=61.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
.-.+||-+|-.+-.....|.+. ..+.+|||+.+ ++-+..+++.+--.. -+..+|+.-.++ ...+|++|+++..+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAPP 154 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccchh
Confidence 3468999999988777666665 67889988764 333444444321111 244566644333 367999999999998
Q ss_pred ccChhhhccccccchh-hccCceEEEecCCCcc
Q 027139 168 YLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQ 199 (227)
Q Consensus 168 yLspryLNkTLPeLaR-vsadglViF~G~Pgqq 199 (227)
++.+ ++.| +..+|.++++=.++.|
T Consensus 155 ~~~~--------~~~~~L~pgG~lv~~~~~~~~ 179 (210)
T 3lbf_A 155 EIPT--------ALMTQLDEGGILVLPVGEEHQ 179 (210)
T ss_dssp SCCT--------HHHHTEEEEEEEEEEECSSSC
T ss_pred hhhH--------HHHHhcccCcEEEEEEcCCce
Confidence 8764 3444 4556766665444433
No 75
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=92.83 E-value=0.13 Score=38.07 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=63.6
Q ss_pred eeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccCh
Q 027139 94 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (227)
Q Consensus 94 kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLsp 171 (227)
+||.+|..+......|.+. ..+..|||+-+ ++.+..+.+..-.+--+..+|+. .+|+...+|++|+.+ +-++.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~--~~~~~~ 107 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLA-DFDIVADAWEGIVSI--FCHLPS 107 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTT-TBSCCTTTCSEEEEE--CCCCCH
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChh-hcCCCcCCccEEEEE--hhcCCH
Confidence 9999999997777666665 56888887642 22233332221001224456653 346667899999985 346677
Q ss_pred hhhccccccchhhc-cCceEEEec
Q 027139 172 KYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 172 ryLNkTLPeLaRvs-adglViF~G 194 (227)
....+.|-++.|+- .+|.++++.
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 78888888888875 467777765
No 76
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=92.76 E-value=0.082 Score=42.13 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=65.5
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||.||..|-.....|.+.- ..+..|||+.+ ++-+..+++..-.+=-+.++|+. .+|+ +.+|++|+....+.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIEL-NDKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCCC-SSCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcCc-CCCeeEEEECChhh
Confidence 4689999999998888777662 46888887643 23333333322112235567776 4666 57999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027139 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (227)
++... .+.|-++.|+-. +|.+++.
T Consensus 101 ~~~~~--~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 101 HMTTP--ETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp GCSSH--HHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCH--HHHHHHHHHHcCCCCEEEEE
Confidence 98532 466777777654 5666544
No 77
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=92.45 E-value=0.17 Score=41.06 Aligned_cols=102 Identities=12% Similarity=0.159 Sum_probs=60.4
Q ss_pred ceeeeecCCcchhhhhcccccccccccccc-c--cccchhHHH-----Hhhhh----hcceeEeeecCC-----CC-C-C
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP-Y--DIEDADARC-----KSLVH----KGIVRVADIKFP-----LP-Y-R 153 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEP-y--diedad~~C-----KsLVr----KGiVRvADIkfp-----LP-Y-R 153 (227)
.+||.+|-.|..+--.|.+....+.+||+. . -++.+..|+ +..-- ++-|++...... ++ + .
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 489999999877655566655457888886 2 244455555 22100 012443211110 11 0 2
Q ss_pred CCCccEEEecccccccChhhhccccccchhhcc------CceEEEecCC
Q 027139 154 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVAS------DGVLIFAGYP 196 (227)
Q Consensus 154 ~kSFslVIVSDaLDyLspryLNkTLPeLaRvsa------dglViF~G~P 196 (227)
..+|++||.+|.+-+ +..+.+.+.++.|+-. +|.++++-.|
T Consensus 161 ~~~fD~Ii~~dvl~~--~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 161 LQRFQVVLLADLLSF--HQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp CSSBSEEEEESCCSC--GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred CCCCCEEEEeCcccC--hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 578999999999876 4556677778888655 8865554444
No 78
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=92.38 E-value=0.23 Score=36.86 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=71.9
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh-hcceeEeeecCCCC-CCCC
Q 027139 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLP-YRAK 155 (227)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLP-YR~k 155 (227)
.+..|+......=.+||-+|-.|-..-..+++....+.+|||..+ ++-+..|.+..-- +--+..+|+.-.++ +...
T Consensus 33 l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 112 (189)
T 3p9n_A 33 LFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTS 112 (189)
T ss_dssp HHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSS
T ss_pred HHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCC
Confidence 345555432234468999999998877767877667889988653 4445555543211 11245566543222 3367
Q ss_pred CccEEEecccccccChhhhccccccchh---hccCceEEEec
Q 027139 156 SFPLVIVSDALDYLSPKYLNKTLPDLAR---VASDGVLIFAG 194 (227)
Q Consensus 156 SFslVIVSDaLDyLspryLNkTLPeLaR---vsadglViF~G 194 (227)
+|++|+...... .....+.+.+.++.| +..+|++++.-
T Consensus 113 ~fD~i~~~~p~~-~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 113 PVDLVLADPPYN-VDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp CCSEEEECCCTT-SCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred CccEEEECCCCC-cchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 899887654422 224677888888887 77888888864
No 79
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=92.33 E-value=0.066 Score=42.03 Aligned_cols=100 Identities=21% Similarity=0.211 Sum_probs=68.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-----hhhcceeEeeecCCCC---CCCCCccEEE
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-----VHKGIVRVADIKFPLP---YRAKSFPLVI 161 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsL-----VrKGiVRvADIkfpLP---YR~kSFslVI 161 (227)
-.+||.+|..|......|.+. ..+..||++.+ ++-+..++... ..+-.+..+|+. .+| +-..+|++|+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDAVI 135 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEEEE
Confidence 358999999999888777766 44888888653 23333333111 112223445542 344 6678999999
Q ss_pred ec-ccccccCh-----hhhccccccchhhc-cCceEEEe
Q 027139 162 VS-DALDYLSP-----KYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 162 VS-DaLDyLsp-----ryLNkTLPeLaRvs-adglViF~ 193 (227)
.. +++.|+.. ..+.+.|-++.|+- .+|.++++
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 98 99999987 66888889999875 45666654
No 80
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=92.15 E-value=0.12 Score=43.36 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=71.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCC-CCCCccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY-RAKSFPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPY-R~kSFslVIVSDaLDyL 169 (227)
.+||-+|..|-..-..|.+. ..+.+|||+.+ ++-+..+++... --+++.|+.++++- -..+|++|+.+.++.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 58999999988766666554 56888888654 344444443321 11334444442232 24689999999999999
Q ss_pred ChhhhccccccchhhccCceEEEecCCC
Q 027139 170 SPKYLNKTLPDLARVASDGVLIFAGYPG 197 (227)
Q Consensus 170 spryLNkTLPeLaRvsadglViF~G~Pg 197 (227)
.+..+.+.+-++.|+-..|.++++-.+|
T Consensus 124 ~~~~~~~~l~~l~~lLPGG~l~lS~~~g 151 (261)
T 3iv6_A 124 TTEEARRACLGMLSLVGSGTVRASVKLG 151 (261)
T ss_dssp CHHHHHHHHHHHHHHHTTSEEEEEEEBS
T ss_pred CHHHHHHHHHHHHHhCcCcEEEEEeccC
Confidence 9999999999999977999999885544
No 81
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=92.07 E-value=0.49 Score=36.26 Aligned_cols=94 Identities=14% Similarity=0.102 Sum_probs=63.7
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCC-CCCccEEEecccccc
Q 027139 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYR-AKSFPLVIVSDALDY 168 (227)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR-~kSFslVIVSDaLDy 168 (227)
..-.+||-+|-.|......|.+. ..+.+|||+.+ +.-..++....+--+..+|+.-++|+. ..+|++|+.++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSP--ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCH--HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 34468999999998877777766 56888988753 122222322233346678887678988 88999998772
Q ss_pred cChhhhccccccchhhc-cCceEEEec
Q 027139 169 LSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G 194 (227)
...+.|.++.|+- .+|.++..+
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFLYVG 142 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEeC
Confidence 3556777888765 456666444
No 82
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=91.97 E-value=0.16 Score=38.65 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=64.6
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
.-.+||.+|-.+-.....|.+.- ..+..|||+.+ +.-..++....+--+..+|+.- +| -..+|++|+.++++.|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD--DMLEKAADRLPNTNFGKADLAT-WK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH--HHHHHHHHHSTTSEEEECCTTT-CC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHhCCCcEEEECChhh-cC-ccCCcCEEEEeCchhhC
Confidence 34689999999888777666552 56788887653 1112222222233456777753 45 57899999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEec
Q 027139 170 SPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G 194 (227)
. ...+.|.++.|+-. +|.++++-
T Consensus 109 ~--~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 109 P--DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp T--THHHHHHHHGGGEEEEEEEEEEE
T ss_pred C--CHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 35577888888755 56666653
No 83
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=91.67 E-value=0.08 Score=42.92 Aligned_cols=105 Identities=12% Similarity=0.236 Sum_probs=70.0
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhh------------------------------
Q 027139 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHK------------------------------ 138 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrK------------------------------ 138 (227)
-.+||-||-.+-.+...|.+. ...+.+||+.-+ ++.|..+.+.....
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 358999999998887777766 356888988643 44444444332211
Q ss_pred ---------------------------cce--eEeeecCC----CCCCCCCccEEEeccccccc----Chhhhccccccc
Q 027139 139 ---------------------------GIV--RVADIKFP----LPYRAKSFPLVIVSDALDYL----SPKYLNKTLPDL 181 (227)
Q Consensus 139 ---------------------------GiV--RvADIkfp----LPYR~kSFslVIVSDaLDyL----spryLNkTLPeL 181 (227)
..| +.+|+.-. +|+...+|++|+...++.|+ ++..+-+.+-++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~ 206 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRI 206 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHH
Confidence 122 33444321 34677899999999999998 666777888888
Q ss_pred hhh-ccCceEEEecCC
Q 027139 182 ARV-ASDGVLIFAGYP 196 (227)
Q Consensus 182 aRv-sadglViF~G~P 196 (227)
.|+ ..+|++|+.-.|
T Consensus 207 ~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 207 YRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHEEEEEEEEEECCC
T ss_pred HHHhCCCcEEEEecCC
Confidence 886 457888887544
No 84
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.63 E-value=0.41 Score=37.15 Aligned_cols=93 Identities=23% Similarity=0.217 Sum_probs=59.1
Q ss_pred cccceeeeecCCcchhhhhcccc-ccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 90 DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
..-.+||-+|..+-.....|.+. ...+.+|||+.+ +.-..++....+--+..+|+. .+|+...+|++|+..+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK--VAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH--HHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCCh--
Confidence 34468999999996666666655 256888988753 122222222222245667764 467778899999987652
Q ss_pred cChhhhccccccchhhcc-CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~G 194 (227)
..+.++.|+-. +|.+++..
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEE
T ss_pred -------hhHHHHHHhcCCCcEEEEEE
Confidence 34677777755 56666553
No 85
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.45 E-value=0.66 Score=35.13 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=65.1
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccE
Q 027139 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPL 159 (227)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFsl 159 (227)
.+..|++.-. -.+||.+|..+-.....|.+. .|+|+.+ +.-..|+.. .--+..+|+. .+|+...+|++
T Consensus 38 ~~~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~--~~~~~a~~~--~~~~~~~d~~-~~~~~~~~fD~ 105 (219)
T 1vlm_A 38 ELQAVKCLLP--EGRGVEIGVGTGRFAVPLKIK-----IGVEPSE--RMAEIARKR--GVFVLKGTAE-NLPLKDESFDF 105 (219)
T ss_dssp HHHHHHHHCC--SSCEEEETCTTSTTHHHHTCC-----EEEESCH--HHHHHHHHT--TCEEEECBTT-BCCSCTTCEEE
T ss_pred HHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHH-----hccCCCH--HHHHHHHhc--CCEEEEcccc-cCCCCCCCeeE
Confidence 3344544433 358999999998887777665 7776543 111222221 2234456663 46777889999
Q ss_pred EEecccccccChhhhccccccchhhc-cCceEEEec
Q 027139 160 VIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 160 VIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
|+.++.|.++. -..+.|-++.|+- .+|.++++-
T Consensus 106 v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 106 ALMVTTICFVD--DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp EEEESCGGGSS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchHhhcc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999999984 2356777787764 456777765
No 86
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=91.37 E-value=0.35 Score=36.58 Aligned_cols=95 Identities=16% Similarity=0.080 Sum_probs=59.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
-.+||.+|..+-.....|.+.. .+..|||+-+ ++-+..+++..- +=-+..+|+.-++| ...+|++||+...+.++
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 3589999999977666666554 7788887642 233333332211 11234566654444 45789999999999887
Q ss_pred Chhhhccccccchhh-ccCceEEEecCCC
Q 027139 170 SPKYLNKTLPDLARV-ASDGVLIFAGYPG 197 (227)
Q Consensus 170 spryLNkTLPeLaRv-sadglViF~G~Pg 197 (227)
.. ++.|+ ..+|.++++-.+.
T Consensus 148 ~~--------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 148 LC--------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CH--------HHHHTEEEEEEEEEEECSS
T ss_pred HH--------HHHHHcCCCcEEEEEEcCC
Confidence 63 34444 4567777765443
No 87
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=91.30 E-value=0.22 Score=36.63 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=61.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCC--CCCCCCC-ccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP--LPYRAKS-FPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfp--LPYR~kS-FslVIVSDaLDyL 169 (227)
.+||.+|..+......|.+. ..+..|||+.+ +.-..++.. ...-+...|+.-. .|....+ |++|+.+..+.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-GIEAVGVDGDR--TLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCH--HHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 78999999999888777766 56888887753 222223322 2222334443221 2444554 99999999998
Q ss_pred Chhhhccccccchhhcc-CceEEEec
Q 027139 170 SPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G 194 (227)
.....+.|-++.|+-. +|.++++-
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 3445577888888755 56666654
No 88
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=91.29 E-value=0.3 Score=41.29 Aligned_cols=102 Identities=23% Similarity=0.152 Sum_probs=70.5
Q ss_pred ccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhh--c-----c--eeEeeecCC-----CCC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--G-----I--VRVADIKFP-----LPY 152 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrK--G-----i--VRvADIkfp-----LPY 152 (227)
.-.+||-+|..|-.....|.+. ...+..||++.+ ++-+..+.+..-.+ | - +..+|+.-. .|+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 3458999999998877777765 456889998754 34455555443221 3 2 345666432 177
Q ss_pred CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 027139 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 153 R~kSFslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
...+|++|+....+.++.. ..+.|.++.|+= .+|.++|+-
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEE
Confidence 7899999999999999853 467888888875 467777764
No 89
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.19 E-value=0.34 Score=39.40 Aligned_cols=108 Identities=19% Similarity=0.243 Sum_probs=71.8
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---ee--EeeecCCCCC
Q 027139 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---VR--VADIKFPLPY 152 (227)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKGi---VR--vADIkfpLPY 152 (227)
.|.+-+.|. ..-.+||-||-.|-.....|++.- ..+..|+ |++++-...+.-. +.|+ |+ ..|+--|+|-
T Consensus 158 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~ 234 (332)
T 3i53_A 158 YTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA 234 (332)
T ss_dssp HTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC
Confidence 344444554 345799999999998888887653 3455555 4444333333322 2232 44 4566546654
Q ss_pred CCCCccEEEecccccccChhhhccccccchhh-ccCceEEEec
Q 027139 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (227)
Q Consensus 153 R~kSFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G 194 (227)
+|++|+.+++|.|.+....-+.|-++.|+ ..+|.+++.-
T Consensus 235 ---~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 235 ---GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ---SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ---CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 89999999999999988888888888886 5577776654
No 90
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=91.02 E-value=0.1 Score=37.21 Aligned_cols=114 Identities=13% Similarity=0.102 Sum_probs=67.6
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh--hcceeEeeecCCCCCCCCCccEEEecccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.-.+||.+|..+-.....+.+.. .+..|+|+.+ ++.+..+++..-- +--+..+|+.-++|.- .+|++|+.+..+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 34589999999977776676665 7788887643 3444444443211 1123456665445532 489999988766
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCCCccc-hhhhhhcccCC
Q 027139 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQR-AKVAELSKFGR 211 (227)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~Pgqqr-akvaelsKfGr 211 (227)
.. +.+.+-++.|+ ..+|.+++.....+.. .-...+.+.|-
T Consensus 111 ~~-----~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 111 GE-----LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp TC-----HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HH-----HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 43 35566666664 5567887776443332 22333445553
No 91
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=90.82 E-value=0.55 Score=34.92 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=62.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccccChh
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 172 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyLspr 172 (227)
.+||-+|-.|..+...|.+.. +.+|||.-+-- ++. ..+--+..+|+.-++ ...+|++|+..-.+-..+++
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~-----~~~-~~~~~~~~~d~~~~~--~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRA-----LES-HRGGNLVRADLLCSI--NQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS--EEEEEESCHHH-----HHT-CSSSCEEECSTTTTB--CGGGCSEEEECCCCBTTCCC
T ss_pred CeEEEeccCccHHHHHHHhcC--cEEEEECCHHH-----Hhc-ccCCeEEECChhhhc--ccCCCCEEEECCCCccCCcc
Confidence 499999999998888887776 88888764311 111 223346678876544 45899999886444333222
Q ss_pred -------hhccccccchhhccCceEEEecCCCccchhh
Q 027139 173 -------YLNKTLPDLARVASDGVLIFAGYPGQQRAKV 203 (227)
Q Consensus 173 -------yLNkTLPeLaRvsadglViF~G~Pgqqrakv 203 (227)
-.-..+.++.|...+|.+++......+...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~~~~~~~l 132 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAVTVGMLYLLVIEANRPKEV 132 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHCCSSEEEEEEEGGGCHHHH
T ss_pred ccccCCcchHHHHHHHHhhCCCCEEEEEEecCCCHHHH
Confidence 1122344455544889888876444444443
No 92
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=90.54 E-value=0.25 Score=36.92 Aligned_cols=97 Identities=18% Similarity=0.102 Sum_probs=59.9
Q ss_pred cceeeeecCCcchhhhhcccccc--cccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEecccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee--tEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
-.+||.+|..+-.....|.+... .+..|+|+.+ ++-+..+++..--.. -+..+|+.-++| ...+|++|+++..+
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAAG 156 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSBB
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCch
Confidence 35899999998777777776553 6888888653 233333333221111 234567654444 25689999999999
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCCC
Q 027139 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPG 197 (227)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~Pg 197 (227)
.++.. ++.|+ ..+|.++++=.++
T Consensus 157 ~~~~~--------~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 157 PKIPE--------PLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SSCCH--------HHHHTEEEEEEEEEEESSS
T ss_pred HHHHH--------HHHHHcCCCcEEEEEECCC
Confidence 87753 44444 4567766664443
No 93
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=90.44 E-value=0.29 Score=39.04 Aligned_cols=99 Identities=11% Similarity=0.161 Sum_probs=69.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||-+|-.+-.....|.+.-..+..||++-+ ++-+..+++..--. =-+..+|+. .+ ..+|++|+...++.
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSLGAFE 148 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEESCGG
T ss_pred cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEcchHH
Confidence 358999999998888778776347788887642 33344444332111 114566763 23 78999999999999
Q ss_pred cc-------Chhhhccccccchhhc-cCceEEEec
Q 027139 168 YL-------SPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 168 yL-------spryLNkTLPeLaRvs-adglViF~G 194 (227)
++ .++.+.+.+.++.|+- .+|.+++..
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99 6688888999998865 567777765
No 94
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=90.37 E-value=0.16 Score=39.26 Aligned_cols=95 Identities=14% Similarity=0.189 Sum_probs=61.5
Q ss_pred ceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhcceeEeeecCC---CCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfp---LPYR~kSFslVIVSDaL 166 (227)
.+||-+|-.|-.....|.+. ...+..|||.-+ ++++..+++.. ..=....+|+.-| +|.. .+|++|+ .
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~-~--- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY-E--- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-E---
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-E---
Confidence 47999999998887777766 346889998765 46666666654 2212345677644 3443 6899998 2
Q ss_pred cccChhhhccccccchh-hccCceEEEe
Q 027139 167 DYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (227)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~ 193 (227)
|.-.|......|.++.| +..+|.++++
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 33344333444777775 4567887774
No 95
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=90.24 E-value=0.24 Score=38.14 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=61.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCC-CCCCCCCccEEEe-cccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP-LPYRAKSFPLVIV-SDAL 166 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfp-LPYR~kSFslVIV-SDaL 166 (227)
.-.+||.||..|-.....|.+....+.+|||+.+ ++-+..+++..-.+--+..+|+.-. .|+...+|++|+. +..+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 4468999999999888877665566889998764 2333333332211112233444321 1666789999987 5443
Q ss_pred --cccChhhhccccccchhhc-cCceEEEec
Q 027139 167 --DYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 167 --DyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
.........+.+.++.|+= .+|.++|.-
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1222222334577888874 577777664
No 96
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=89.91 E-value=0.34 Score=35.35 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=58.4
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc--ee--EeeecCCCCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi--VR--vADIkfpLPYR~kSFslVIVSDaL 166 (227)
.+||-+|-.|-.....|.+. ..+.+|||..+ ++-+..+++.. |+ |+ .+|..--.++-..+|++|+.+ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~---~~~~v~~~~~~~~~l~~~~~~~fD~v~~~--~ 97 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDL---GIENTELILDGHENLDHYVREPIRAAIFN--L 97 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHH---TCCCEEEEESCGGGGGGTCCSCEEEEEEE--E
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCcHHHHHhhccCCcCEEEEe--C
Confidence 57999999997777666666 78889988653 45555555532 32 22 244432222447899999654 2
Q ss_pred cccCh---------hhhccccccchh-hccCceEEEecCCCc
Q 027139 167 DYLSP---------KYLNKTLPDLAR-VASDGVLIFAGYPGQ 198 (227)
Q Consensus 167 DyLsp---------ryLNkTLPeLaR-vsadglViF~G~Pgq 198 (227)
.|+.+ .-.-+.|.++.| +..+|.++++-++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 44432 222234566655 456788888877764
No 97
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=89.60 E-value=0.053 Score=44.37 Aligned_cols=115 Identities=19% Similarity=0.215 Sum_probs=64.3
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-------------c
Q 027139 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-------------I 140 (227)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-------------i 140 (227)
|.+..+|.+.. ..-.+||.+|-.+..+...+++....+..+||.-+ ++-+..+. .+ ..| -
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~-~~~l~~~~~~~~~~~v~ 137 (281)
T 1mjf_A 63 EPLVHPAMLAH---PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KI-DNGLLEAMLNGKHEKAK 137 (281)
T ss_dssp HHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CT-TTTHHHHHHTTCCSSEE
T ss_pred HHHHHHHHhhC---CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hh-ccccccccccCCCCcEE
Confidence 44444454431 23468999999999999999987556788887542 22233332 11 002 2
Q ss_pred eeEeeecCCCCCCCCCccEEEecccccccCh-hhh--ccccccchhh-ccCceEEEe-cCCC
Q 027139 141 VRVADIKFPLPYRAKSFPLVIVSDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFA-GYPG 197 (227)
Q Consensus 141 VRvADIkfpLPYR~kSFslVIVSDaLDyLsp-ryL--NkTLPeLaRv-sadglViF~-G~Pg 197 (227)
+..+|..--++- ..+|++||+ |+-+...| ..| ...+-++.|+ ..+|++++. +.|-
T Consensus 138 ~~~~D~~~~l~~-~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 138 LTIGDGFEFIKN-NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVY 197 (281)
T ss_dssp EEESCHHHHHHH-CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EEECchHHHhcc-cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 445665322333 678999885 77654433 211 2234444444 668888774 5664
No 98
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=89.60 E-value=0.27 Score=37.91 Aligned_cols=95 Identities=18% Similarity=0.200 Sum_probs=58.4
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
.+||-+|-.+-.....|.+.-..+.+|||+.+ ++.+..+++..--.. -+..+|+..++|-. ..|++||++..+.++
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK-APYDVIIVTAGAPKI 171 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG-CCEEEEEECSBBSSC
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCC-CCccEEEECCcHHHH
Confidence 48999999987777766665447888888643 344444444321111 24556765554432 249999999998877
Q ss_pred Chhhhccccccchh-hccCceEEEecCC
Q 027139 170 SPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (227)
Q Consensus 170 spryLNkTLPeLaR-vsadglViF~G~P 196 (227)
.. ++.| +..+|.++++-.+
T Consensus 172 ~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 172 PE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CH--------HHHHTEEEEEEEEEEECS
T ss_pred HH--------HHHHhcCCCcEEEEEEec
Confidence 54 3444 3456766665433
No 99
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=89.16 E-value=0.13 Score=36.38 Aligned_cols=116 Identities=14% Similarity=0.083 Sum_probs=69.8
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCC---CCCccEEEecccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYR---AKSFPLVIVSDAL 166 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR---~kSFslVIVSDaL 166 (227)
-.+||.+|..+......+.+.... ..|||.-+ ++-+..+.+..--+--+..+|+.-.+|.- .++|++|+.....
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 358999999999888777776544 88888642 23344443322102234556665444432 2489998876543
Q ss_pred cccChhhhccccccch--h-hccCceEEEecCCCccchhhhhhcccCCcc
Q 027139 167 DYLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQQRAKVAELSKFGRPV 213 (227)
Q Consensus 167 DyLspryLNkTLPeLa--R-vsadglViF~G~PgqqrakvaelsKfGrpa 213 (227)
. ..+.+.+..+. | +..+|+++++-.+.++-. .-+-.+||+-.
T Consensus 121 ~----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~~-~~~~~~y~~~~ 165 (171)
T 1ws6_A 121 A----MDLAALFGELLASGLVEAGGLYVLQHPKDLYLP-LGERRVYGENA 165 (171)
T ss_dssp T----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSCCT-TSEEEEETTEE
T ss_pred c----hhHHHHHHHHHhhcccCCCcEEEEEeCCccCCc-hhhhhccCcEE
Confidence 2 34455566665 4 567888888776655433 44555677643
No 100
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=88.94 E-value=0.2 Score=41.45 Aligned_cols=119 Identities=19% Similarity=0.198 Sum_probs=65.6
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhh---h--hhcceeEeee
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADI 146 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsL---V--rKGiVRvADI 146 (227)
.|.+..+|.+.. ..-.+||.+|-.+..+...+++. ...+..+||.-+ ++-+..+.+.+ . .+=-+..+|.
T Consensus 77 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~ 153 (296)
T 1inl_A 77 HEMLAHVPMFLH---PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG 153 (296)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred HHHHhHHHHhcC---CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 355555565532 23378999999999999999987 346677776532 33334443321 1 1112445665
Q ss_pred cCCCCCCCCCccEEEecccccc-cChh---hhccccccchh-hccCceEEEec-CCC
Q 027139 147 KFPLPYRAKSFPLVIVSDALDY-LSPK---YLNKTLPDLAR-VASDGVLIFAG-YPG 197 (227)
Q Consensus 147 kfpLPYR~kSFslVIVSDaLDy-Lspr---yLNkTLPeLaR-vsadglViF~G-~Pg 197 (227)
.-.++....+|++||+ |+.|. ..|. |-...+.++.| +..+|++++.. .|-
T Consensus 154 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 154 AEYVRKFKNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp HHHGGGCSSCEEEEEE-EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHHhhCCCCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 4335545678999885 66554 3221 11233444444 46788888763 453
No 101
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=88.86 E-value=0.076 Score=38.63 Aligned_cols=104 Identities=11% Similarity=0.032 Sum_probs=65.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||-+|-.+......+++....+.+|||..+ ++.+..+++..- .+--+..+|+.-.+|.-.++|++|+......
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 358999999999988888877667899998653 444555554431 1123455776555555556799888653321
Q ss_pred ccChhhhccccccch--h-hccCceEEEecCCCc
Q 027139 168 YLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQ 198 (227)
Q Consensus 168 yLspryLNkTLPeLa--R-vsadglViF~G~Pgq 198 (227)
.....+.+-.++ | +..+|++++.-.+.+
T Consensus 112 ---~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 112 ---KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 122334455553 3 567888888765444
No 102
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=88.77 E-value=0.1 Score=40.00 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=68.7
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhh-hhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
.+||-+|-.|-.+--.+++....+..|||.. -++-+..|++..- .+--+..+|+.-.+|....+|++|+..-. |-
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p--~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP--FR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS--SS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC--CC
Confidence 5899999998887777777765688888754 2444555554321 11124556765556666779998876433 32
Q ss_pred Chhhhccccccchh---hccCceEEEecCCCcc
Q 027139 170 SPKYLNKTLPDLAR---VASDGVLIFAGYPGQQ 199 (227)
Q Consensus 170 spryLNkTLPeLaR---vsadglViF~G~Pgqq 199 (227)
.....+.+.++.+ +..+|++++.-.+.++
T Consensus 134 -~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 134 -RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp -TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred -CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 2345566777776 7889999988876554
No 103
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=88.63 E-value=0.36 Score=38.52 Aligned_cols=98 Identities=17% Similarity=0.095 Sum_probs=61.5
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhh--hhhcceeEeeecCCCCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL--VHKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsL--VrKGiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.+||-+|-.+-.....|++. ...+..|+|..+ ++.+..+++.. ..+=-+..+|+.-+ ....+|++|+. |.-
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~fD~Vi~-~~~ 188 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--ISDQMYDAVIA-DIP 188 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--CCSCCEEEEEE-CCS
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc--CcCCCccEEEE-cCc
Confidence 58999999988877777765 256888888643 44455555433 01112344666544 44678999987 322
Q ss_pred cccChhhhccccccchh-hccCceEEEecCCCcc
Q 027139 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQ 199 (227)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~Pgqq 199 (227)
...+.|.++.| +..+|.++++..+-.+
T Consensus 189 ------~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 216 (275)
T 1yb2_A 189 ------DPWNHVQKIASMMKPGSVATFYLPNFDQ 216 (275)
T ss_dssp ------CGGGSHHHHHHTEEEEEEEEEEESSHHH
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 22466777777 4667888887755433
No 104
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=88.57 E-value=0.61 Score=34.49 Aligned_cols=107 Identities=13% Similarity=0.017 Sum_probs=63.5
Q ss_pred ceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||.+|..+-.....|.+. ...+..|+|+.+ ++-+..+++..--.. -+..+|+.-.. ...+|++|+. +.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~-~~~~~ 143 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVIS-RAFAS 143 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEEC-SCSSS
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEE-eccCC
Confidence 48999999998887777765 356888988653 344444544331111 13345554322 3478999984 44322
Q ss_pred cChhhhccccccchhh-ccCceEEEecCCCccchhhhhhcc
Q 027139 169 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSK 208 (227)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~PgqqrakvaelsK 208 (227)
+.+.+.++.|+ ..+|.+++.-.+. +...+.++.+
T Consensus 144 -----~~~~l~~~~~~L~~gG~l~~~~~~~-~~~~~~~~~~ 178 (207)
T 1jsx_A 144 -----LNDMVSWCHHLPGEQGRFYALKGQM-PEDEIALLPE 178 (207)
T ss_dssp -----HHHHHHHHTTSEEEEEEEEEEESSC-CHHHHHTSCT
T ss_pred -----HHHHHHHHHHhcCCCcEEEEEeCCC-chHHHHHHhc
Confidence 34555556554 4577777765444 4455666655
No 105
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=88.53 E-value=0.55 Score=39.37 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=68.7
Q ss_pred CCccchHHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh-----h-hhc
Q 027139 69 GDFSCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL-----V-HKG 139 (227)
Q Consensus 69 g~~sCt~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsL-----V-rKG 139 (227)
.|.....|.+..+|.+.. ..-++||.+|-.++.+...|++.. ..+..+||.-+ ++-+..+.+.+ - .+=
T Consensus 64 ~de~~Y~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv 140 (294)
T 3adn_A 64 RDEFIYHEMMTHVPLLAH---GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRF 140 (294)
T ss_dssp TTHHHHHHHHHHHHHHHS---TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTC
T ss_pred CchhHHHHHHHHHHHhcC---CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCce
Confidence 344445666666666532 345799999999999999999873 45677777532 23333333322 0 123
Q ss_pred ceeEeeecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEec-CCC
Q 027139 140 IVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFAG-YPG 197 (227)
Q Consensus 140 iVRvADIkfpLPYR~kSFslVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~G-~Pg 197 (227)
-+.++|..-.++....+|++||+ |.-|-..|. .| ...+-++.| +..+|++++.. .|-
T Consensus 141 ~~~~~D~~~~l~~~~~~fDvIi~-D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 141 KLVIDDGVNFVNQTSQTFDVIIS-DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp CEECSCSCC---CCCCCEEEEEE-CC----------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred EEEEChHHHHHhhcCCCccEEEE-CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 46678865556666789998877 665543332 11 222334444 46678777743 443
No 106
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=88.22 E-value=0.2 Score=42.24 Aligned_cols=117 Identities=20% Similarity=0.215 Sum_probs=66.8
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhcc------eeEeee
Q 027139 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGI------VRVADI 146 (227)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKGi------VRvADI 146 (227)
|.+..+|.+.. ..-.+||.+|-.+..+...+++. ...+..+||.-+ ++-+..+.+.+ ..|+ +..+|.
T Consensus 104 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~-~~~~~~~~v~~~~~D~ 179 (321)
T 2pt6_A 104 EMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI-SCGYEDKRVNVFIEDA 179 (321)
T ss_dssp HHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-SGGGGSTTEEEEESCH
T ss_pred HHHHHHHHhcC---CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEEccH
Confidence 45555555432 23468999999999999999887 345677776432 23333333322 1122 455665
Q ss_pred cCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-cCCC
Q 027139 147 KFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GYPG 197 (227)
Q Consensus 147 kfpLPYR~kSFslVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~Pg 197 (227)
.-.++....+|++||+ |..|...|. .| ...+.++.| +..+|++++. +.|-
T Consensus 180 ~~~l~~~~~~fDvIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 180 SKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp HHHHHHCCSCEEEEEE-ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred HHHHhhcCCCceEEEE-CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 4334434678998875 665544332 12 233445544 4678888874 3553
No 107
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=88.21 E-value=0.63 Score=37.39 Aligned_cols=102 Identities=14% Similarity=0.052 Sum_probs=67.3
Q ss_pred ccceeeeecCCcchhhhhcc--cccccccccccccc--ccchhHHHHhhhhhc--ceeEeeecCCCCCCCCCccEEEecc
Q 027139 91 SMHKVLHVGPDTCSVVSTLL--KEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSD 164 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LL--kEeetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~kSFslVIVSD 164 (227)
.-.+||-||-.+-.....|. +....+..|||+.+ ++-+..+++..--.+ -+..+|+.- +|+. .+|++|+...
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LDTR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CCCC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CCcc-CCeEEEEECC
Confidence 34679999999988887773 45567888887642 233333333211111 245566643 4554 8999999999
Q ss_pred ccccc-Chhhhccccccchhh-ccCceEEEec
Q 027139 165 ALDYL-SPKYLNKTLPDLARV-ASDGVLIFAG 194 (227)
Q Consensus 165 aLDyL-spryLNkTLPeLaRv-sadglViF~G 194 (227)
.+.|+ +|...-+.|-++.|+ ..+|.++++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998 676655677888876 4567777665
No 108
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=87.73 E-value=0.077 Score=40.57 Aligned_cols=100 Identities=7% Similarity=-0.042 Sum_probs=67.0
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcc--eeEeeecC---CCCCCC-CCccEEEeccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI--VRVADIKF---PLPYRA-KSFPLVIVSDA 165 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGi--VRvADIkf---pLPYR~-kSFslVIVSDa 165 (227)
-.+||.+|..|......|.+... +..||++.+ ++-..++......- +..+|+.- +.++.. .+|.+|+.+.+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSK--SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS-CEEEEESCH--HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCH--HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 35799999999988888877655 788887643 23333433333222 33455532 222221 24899999999
Q ss_pred ccccChhhhccccccchhhcc-CceEEEec
Q 027139 166 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvsa-dglViF~G 194 (227)
+.++++....+.|-++.|+-. +|.+++.-
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999999989999999999765 56655554
No 109
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=87.73 E-value=2.7 Score=34.59 Aligned_cols=108 Identities=19% Similarity=0.174 Sum_probs=70.9
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---e--eEeeecCCCCC
Q 027139 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLPY 152 (227)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKGi---V--RvADIkfpLPY 152 (227)
++.+-+.+. ..-.+||.||-.+-.....|++.- +.+..|++. +++-..++... +.|+ | ...|+.- +|+
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 254 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL---PGAIDLVNENAAEKGVADRMRGIAVDIYK-ESY 254 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCTTTEEEEECCTTT-SCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec---HHHHHHHHHHHHhcCCCCCEEEEeCcccc-CCC
Confidence 444555554 345789999999998888887764 456777765 33333333322 2232 3 3456532 244
Q ss_pred CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 027139 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 153 R~kSFslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
. .+++|+.+..|.++++....+.|-++.|+- .+|.+++.-
T Consensus 255 ~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 P--EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp C--CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred C--CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3 349999999999999888888888888874 567776554
No 110
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=87.62 E-value=0.28 Score=39.20 Aligned_cols=103 Identities=20% Similarity=0.269 Sum_probs=64.8
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc-e--eEeeecCCCCCCCCCccEEEecccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-V--RVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi-V--RvADIkfpLPYR~kSFslVIVSDaL 166 (227)
-.+||-+|-.|-.....+.+... +..|+|.-+ ++.+..|++. .|+ + ..+|+.-++| ..+|++|+..-..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~---~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKR---NGVRPRFLEGSLEAALP--FGPFDLLVANLYA 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHH---TTCCCEEEESCHHHHGG--GCCEEEEEEECCH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHH---cCCcEEEEECChhhcCc--CCCCCEEEECCcH
Confidence 46899999999666555555544 888887533 4445555442 333 3 3345543333 5689999865333
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCCCccchhhhh
Q 027139 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAE 205 (227)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~Pgqqrakvae 205 (227)
+ .+.+.++++.|+ ..+|.++++|....+...+.+
T Consensus 195 ~-----~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~ 229 (254)
T 2nxc_A 195 E-----LHAALAPRYREALVPGGRALLTGILKDRAPLVRE 229 (254)
T ss_dssp H-----HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHH
T ss_pred H-----HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHH
Confidence 2 356778888775 567899999866555555544
No 111
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=87.53 E-value=0.67 Score=38.29 Aligned_cols=108 Identities=18% Similarity=0.179 Sum_probs=69.8
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc--ceeEeeecCCCCCCCCCc
Q 027139 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF 157 (227)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKG--iVRvADIkfpLPYR~kSF 157 (227)
+.+-+.|. ..-.+||-||-.|-.....|++.- +.+..|++.-++-. ..+.+..-..+ -+...|+--++| +|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~-~~~~~~~~~~~~v~~~~~d~~~~~p----~~ 248 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA-RHRLDAPDVAGRWKVVEGDFLREVP----HA 248 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT-TCCCCCGGGTTSEEEEECCTTTCCC----CC
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh-cccccccCCCCCeEEEecCCCCCCC----CC
Confidence 34445554 345689999999998888888753 44556655422211 11111000011 234567765777 89
Q ss_pred cEEEecccccccChhhhccccccchhhc-cCceEEEec
Q 027139 158 PLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 158 slVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
++|+.+++|.+.++...-+.|-++.|+= .+|.+++.-
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999999999999888888888888874 467766643
No 112
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=87.52 E-value=0.46 Score=37.93 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=65.8
Q ss_pred hhhhHHHHHhc--cccceeeeecCCcchhh----hhccccc-cc--ccccccccc--ccchhHHHHhhhhhc--ceeE--
Q 027139 79 RAIPILKKAYG--DSMHKVLHVGPDTCSVV----STLLKEE-ET--EAWGVEPYD--IEDADARCKSLVHKG--IVRV-- 143 (227)
Q Consensus 79 ~aiP~LkkaYG--dsM~kVLHVGPdtC~VV----s~LLkEe-et--EAWGVEPyd--iedad~~CKsLVrKG--iVRv-- 143 (227)
+.+|-+-+..| ..=.+||-||-.|-.+- +.++... .. +..||||-+ ++.+..+.+.. .| .+++
T Consensus 38 ~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~--~~~~~v~~~~ 115 (292)
T 2aot_A 38 KKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT--SNLENVKFAW 115 (292)
T ss_dssp HTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC--SSCTTEEEEE
T ss_pred HhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc--cCCCcceEEE
Confidence 34554433344 23348999999998643 3333321 22 237888764 22233322210 12 2332
Q ss_pred --eeec-CC----CCCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027139 144 --ADIK-FP----LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 144 --ADIk-fp----LPYR~kSFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
+|+. ++ -|+...+|++|+.+.+|.|+. -+.++|-++.|+ ..+|.++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 116 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp ECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEE
T ss_pred EecchhhhhhhhccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEE
Confidence 2221 22 135678999999999999996 357899999998 667777775
No 113
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=87.06 E-value=0.54 Score=37.19 Aligned_cols=55 Identities=18% Similarity=0.139 Sum_probs=41.6
Q ss_pred eeEeeecCCCCCC---CCCccEEEecccccccCh--hhhccccccchhh-ccCceEEEecC
Q 027139 141 VRVADIKFPLPYR---AKSFPLVIVSDALDYLSP--KYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 141 VRvADIkfpLPYR---~kSFslVIVSDaLDyLsp--ryLNkTLPeLaRv-sadglViF~G~ 195 (227)
+..+|+.-+.|+- ..+|++|+.+-+|+|+.| .-+-+.|.++.|+ -..|.+||++.
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6688887765543 458999999999999764 3455688888884 56788888873
No 114
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=86.97 E-value=0.5 Score=36.09 Aligned_cols=95 Identities=19% Similarity=0.220 Sum_probs=59.6
Q ss_pred ceeeeecCCcchhhhhcccccc-------cccccccccc--ccchhHHHHhhh------hhcceeEeeecCCCCCCCCCc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEE-------TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSF 157 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEee-------tEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLPYR~kSF 157 (227)
.+||.+|-.+......|.+.-. .+.+|||..+ ++-+..+.+..- .+=-+..+|+.-++|- ..+|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCc
Confidence 4899999999777666665332 4788988654 444555554431 1112456777654443 2689
Q ss_pred cEEEecccccccChhhhccccccchh-hccCceEEEecCC
Q 027139 158 PLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (227)
Q Consensus 158 slVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 196 (227)
++|++..++.++. .++.| +..+|.++++=.+
T Consensus 165 D~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 165 NAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred cEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 9999999887654 33444 3457777765443
No 115
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=86.78 E-value=0.24 Score=41.46 Aligned_cols=118 Identities=19% Similarity=0.243 Sum_probs=64.5
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeEeee
Q 027139 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVADI 146 (227)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi------VRvADI 146 (227)
|.+..+|.+. . ..-.+||.+|-.+..+...|++.. ..+..+||.-+ ++-+..+.+.+ ..|+ +..+|.
T Consensus 83 e~l~~~~l~~--~-~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~-~~~~~~~rv~v~~~Da 158 (304)
T 2o07_A 83 EMIANLPLCS--H-PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGM-AIGYSSSKLTLHVGDG 158 (304)
T ss_dssp HHHHHHHHTT--S-SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGCTTEEEEESCH
T ss_pred HHHHHHHHhh--C-CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh-hcccCCCcEEEEECcH
Confidence 4544455432 1 234789999999999999998863 45677777532 22233333221 1122 456675
Q ss_pred cCCCCCCCCCccEEEecccccccChh---hhccccccchh-hccCceEEEec-CCCc
Q 027139 147 KFPLPYRAKSFPLVIVSDALDYLSPK---YLNKTLPDLAR-VASDGVLIFAG-YPGQ 198 (227)
Q Consensus 147 kfpLPYR~kSFslVIVSDaLDyLspr---yLNkTLPeLaR-vsadglViF~G-~Pgq 198 (227)
.--|+....+|++||+ |+-+...|. +....+-++.| +..+|++++.. .|-.
T Consensus 159 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 214 (304)
T 2o07_A 159 FEFMKQNQDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWL 214 (304)
T ss_dssp HHHHHTCSSCEEEEEE-ECC-----------CHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred HHHHhhCCCCceEEEE-CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCccc
Confidence 4334445688998886 776654431 11223444444 46788887754 5543
No 116
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=86.45 E-value=1.1 Score=33.85 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=58.2
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
-.+||-+|-.+-.....|++. ..+..|+|+.+ ++-+..+.+..- .+--+..+|+.-++ ....+|++|+. |
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~-~--- 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFV-D--- 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEE-C---
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEE-C---
Confidence 358999999988777777776 67788887543 333444443321 11123345654433 13568999986 2
Q ss_pred ccChhhhccccccchhh-ccCceEEEecCCCcc
Q 027139 168 YLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (227)
Q Consensus 168 yLspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (227)
+....+.+.++.|+ ..+|.+++.-...+|
T Consensus 166 ---~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 195 (248)
T 2yvl_A 166 ---VREPWHYLEKVHKSLMEGAPVGFLLPTANQ 195 (248)
T ss_dssp ---SSCGGGGHHHHHHHBCTTCEEEEEESSHHH
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 22334566666664 556777666543333
No 117
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=86.24 E-value=0.4 Score=39.27 Aligned_cols=118 Identities=21% Similarity=0.297 Sum_probs=66.4
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhh---h--hhcceeEeeec
Q 027139 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADIK 147 (227)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsL---V--rKGiVRvADIk 147 (227)
|.+..+|.+.. ..-++||.+|-.+..+...+++. ...+..+||.-+ ++-+..+.+.+ . .+=-+..+|..
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~ 139 (275)
T 1iy9_A 63 EMVAHVPLFTH---PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGF 139 (275)
T ss_dssp HHHHHHHHHHS---SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSH
T ss_pred HHHHHHHHhhC---CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHH
Confidence 44445555431 24578999999999999999987 345677776432 22233333221 0 11135566754
Q ss_pred CCCCCCCCCccEEEecccccccChh-hh--ccccccch-hhccCceEEEec-CCC
Q 027139 148 FPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLA-RVASDGVLIFAG-YPG 197 (227)
Q Consensus 148 fpLPYR~kSFslVIVSDaLDyLspr-yL--NkTLPeLa-RvsadglViF~G-~Pg 197 (227)
--|+-..++|++||+ |..+...|. .| ..-+.++. .+..+|++++.. .|-
T Consensus 140 ~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~ 193 (275)
T 1iy9_A 140 MHIAKSENQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPW 193 (275)
T ss_dssp HHHHTCCSCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHhhCCCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 334444678999886 776643321 11 12233444 356788888763 443
No 118
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=86.24 E-value=0.57 Score=35.41 Aligned_cols=108 Identities=15% Similarity=0.180 Sum_probs=63.6
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhh------hhhcceeEeeecCCCCCCCCCccEEE
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSL------VHKGIVRVADIKFPLPYRAKSFPLVI 161 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsL------VrKGiVRvADIkfpLPYR~kSFslVI 161 (227)
-.+||.+|-.+-.....|.+.- ..+..|+|+.+ ++-+..+++.. ..+=-+..+|+.-. +....+|++|+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~ 156 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAIH 156 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEEE
Confidence 3589999999877766666542 25788888653 44555555542 11112445676533 23356799999
Q ss_pred ecccccccChhhhccccccchh-hccCceEEEecCCCccchhhhhhcc
Q 027139 162 VSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKVAELSK 208 (227)
Q Consensus 162 VSDaLDyLspryLNkTLPeLaR-vsadglViF~G~PgqqrakvaelsK 208 (227)
+...+..+ +.++.| +..+|.++++=.|.++......+.|
T Consensus 157 ~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 196 (226)
T 1i1n_A 157 VGAAAPVV--------PQALIDQLKPGGRLILPVGPAGGNQMLEQYDK 196 (226)
T ss_dssp ECSBBSSC--------CHHHHHTEEEEEEEEEEESCTTSCEEEEEEEE
T ss_pred ECCchHHH--------HHHHHHhcCCCcEEEEEEecCCCceEEEEEEE
Confidence 88777443 234444 4567888876555443333333333
No 119
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=86.12 E-value=0.36 Score=36.92 Aligned_cols=94 Identities=15% Similarity=0.058 Sum_probs=63.6
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh-------------hhhhcceeEeeecCCCCCCC-CC
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS-------------LVHKGIVRVADIKFPLPYRA-KS 156 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs-------------LVrKGiVRvADIkfpLPYR~-kS 156 (227)
.+||-+|=.|=.....|.+. ..+..||+..+ |+-+..+.+. ...+=-+..+|+ +-+|+.. .+
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~~~ 101 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDIGH 101 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHHHS
T ss_pred CEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccCCC
Confidence 58999998887776666654 45788887654 3333332210 000112456776 3566654 79
Q ss_pred ccEEEecccccccChhhhccccccchhhccCc
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVASDG 188 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvsadg 188 (227)
|++|+...++.++.+.-..+.+-++.|+=..|
T Consensus 102 fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg 133 (203)
T 1pjz_A 102 CAAFYDRAAMIALPADMRERYVQHLEALMPQA 133 (203)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE
T ss_pred EEEEEECcchhhCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999877777888999976654
No 120
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=86.11 E-value=0.052 Score=45.63 Aligned_cols=103 Identities=16% Similarity=0.241 Sum_probs=67.0
Q ss_pred HHHHHhcc-ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeEe-----eecCCCCCCCCC
Q 027139 83 ILKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVA-----DIKFPLPYRAKS 156 (227)
Q Consensus 83 ~LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvA-----DIkfpLPYR~kS 156 (227)
.+-+.++. .-.+||-||-.+-.....|.+ ...+..||||.+ +.-..++. +|+--.. |.--.+|+...+
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~--~~~~~a~~---~~~~~~~~~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSS--GVAAKARE---KGIRVRTDFFEKATADDVRRTEGP 171 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTTTHHHHHH-TTCEEEEECCCH--HHHHHHHT---TTCCEECSCCSHHHHHHHHHHHCC
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHH-cCCcEEEECCCH--HHHHHHHH---cCCCcceeeechhhHhhcccCCCC
Confidence 33344442 335899999999887766665 456899998853 12222332 2321111 111234666789
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (227)
|++|+..++|.|+. ..++.|-++.|+-. +|+++|.
T Consensus 172 fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 172 ANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp EEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEE
Confidence 99999999999995 67888999999865 5666664
No 121
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=86.03 E-value=0.88 Score=39.55 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=75.1
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCC
Q 027139 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP 151 (227)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLP 151 (227)
|..+.+.++-..+.-...-.+||-+|-.+-.+...|.+. ..+.+|||.-+ ++.+..|++..--..-+..+|+.-. +
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~-~ 293 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA-L 293 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-S
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc-c
Confidence 445556655332111223458999999998887777766 56888888643 3445555543322234566777543 3
Q ss_pred CCCCCccEEEecccccc---cChhhhccccccchh-hccCceEEEecCCC
Q 027139 152 YRAKSFPLVIVSDALDY---LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (227)
Q Consensus 152 YR~kSFslVIVSDaLDy---LspryLNkTLPeLaR-vsadglViF~G~Pg 197 (227)
....+|++||....+.+ .....+.+.+.+..| +..+|.+++..++.
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 34689999998766554 233444455555555 46788999887665
No 122
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=85.90 E-value=0.49 Score=38.39 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=64.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh------------------hhhhcceeEeeecCCCC
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS------------------LVHKGIVRVADIKFPLP 151 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs------------------LVrKGiVRvADIkfpLP 151 (227)
=.+||-+|=.+=.....|.+. .-+..||+..+ |+.|....+. .-.+--+.++|+ +-+|
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~l~ 146 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FDLP 146 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TTGG
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc-ccCC
Confidence 358999998876666555544 55788888764 2323222210 001112456787 4577
Q ss_pred CCC-CCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027139 152 YRA-KSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 152 YR~-kSFslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (227)
... .+|++|+...+|.++.+.-..+.+-+++|+= .+|.+++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 653 7999999999999998876677788888855 45666544
No 123
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=85.81 E-value=0.91 Score=34.91 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=67.1
Q ss_pred cceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhhhhc--ceeEeeecCCCCCCCCCccEEEeccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~kSFslVIVSDa 165 (227)
=.+||-+|-.+......|++. . ..+..|+|.-+ ++.+..+++..--.. -+..+|+.-+ +...+|++|+. |
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~-~- 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVIL-D- 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEE-C-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEE-C-
Confidence 358999999998887777766 2 67888887642 444555555432122 2445666544 45678999886 3
Q ss_pred ccccChhhhccccccchhh-ccCceEEEecC-CCccchhhhhhcccC
Q 027139 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGY-PGQQRAKVAELSKFG 210 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~-PgqqrakvaelsKfG 210 (227)
+....+.+.++.|+ ..+|.+++... ..|...-...+.+.|
T Consensus 170 -----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 22335667777775 45677776653 334333344455555
No 124
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=85.69 E-value=0.34 Score=37.02 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=65.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh---hhcceeEeeecCCCCC-CCCC-ccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV---HKGIVRVADIKFPLPY-RAKS-FPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV---rKGiVRvADIkfpLPY-R~kS-FslVIVSDa 165 (227)
.+||-+|-.|-.+--.+++....+.+|||..+ ++-+..|++..- .+--+..+|+.-.++. ...+ |++|+....
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP 134 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC
Confidence 58999998888776666776666889988653 455655554331 1112445665433443 3568 998886544
Q ss_pred ccccChhhhccccccchh---hccCceEEEecCCCc
Q 027139 166 LDYLSPKYLNKTLPDLAR---VASDGVLIFAGYPGQ 198 (227)
Q Consensus 166 LDyLspryLNkTLPeLaR---vsadglViF~G~Pgq 198 (227)
|- ...+.+.+.++.+ +..+|+++++-.|.+
T Consensus 135 --~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 --FH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 22 3345566777744 678899998887765
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=85.33 E-value=1.4 Score=32.43 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=62.7
Q ss_pred ccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEecc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSD 164 (227)
.-.+||-+|..+-.....|++. ...+.+|||..+ ++-+..+++..- .+=-+..+|+.-..++-..+|++|+..-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 3358999999998877777776 346889988653 344444443321 1112445665433335558999998653
Q ss_pred cc-c------ccChhhhccccccchhh-ccCceEEEecCCC
Q 027139 165 AL-D------YLSPKYLNKTLPDLARV-ASDGVLIFAGYPG 197 (227)
Q Consensus 165 aL-D------yLspryLNkTLPeLaRv-sadglViF~G~Pg 197 (227)
.+ . .-.+...-+.+-++.|+ ..+|.++++.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 22 0 01121222356666664 5678888887665
No 126
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=85.07 E-value=1.2 Score=33.19 Aligned_cols=114 Identities=15% Similarity=0.111 Sum_probs=68.0
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeEeeecCCCCCCCCCccEEEecccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.-.+||-+|..+-.....|.+.. ..+.+|||+.+ ++-+..+++..- .+=-+..+|+.-.++.- .+|++|+....+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSG 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCC
Confidence 34689999999987777776664 46788887643 344444444321 11123446664444432 679999887665
Q ss_pred cccChhhhccccccchh-hccCceEEEecCCCccchhh-hhhcccC
Q 027139 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKV-AELSKFG 210 (227)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~Pgqqrakv-aelsKfG 210 (227)
. .+.+.+.++.| +..+|.+++....-++...+ ..+.+.|
T Consensus 119 ~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 119 G-----MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp T-----CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTT
T ss_pred c-----CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCC
Confidence 4 34466667766 46778888886553333332 3344444
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=85.06 E-value=0.35 Score=40.26 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=66.7
Q ss_pred ceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEecccccc-
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY- 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDy- 168 (227)
.+||.+|-.+..+...|.+... .+..|||... ++-+..+++..--..-+..+|+- ..+ ..+|++|+....+.+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-~~~--~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVF-SEV--KGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT-TTC--CSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccc-ccc--cCCeeEEEECCCcccC
Confidence 4899999999998888877653 4788888654 45555565543222334566762 222 679999999887765
Q ss_pred --cChhhhccccccchhh-ccCceEEEecC
Q 027139 169 --LSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 169 --LspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
.+.....+.+-++.|+ ..+|.+++..+
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 2344455666677765 56788888764
No 128
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=85.04 E-value=2.4 Score=35.50 Aligned_cols=108 Identities=14% Similarity=0.200 Sum_probs=71.1
Q ss_pred hhhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---ee--EeeecCCCC
Q 027139 80 AIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---VR--VADIKFPLP 151 (227)
Q Consensus 80 aiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKGi---VR--vADIkfpLP 151 (227)
.++.+-+.|. ..-.+||-||-.+-.....|++.- ..+..|++ ++++-...+... +.|+ |+ ..|+.-|+|
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p 266 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLE---RPPVAEEARELLTGRGLADRCEILPGDFFETIP 266 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEc---CHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC
Confidence 3566667775 345799999999988888887753 33455554 344333333322 2232 44 456654555
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027139 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 152 YR~kSFslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (227)
- +|++|+.+++|.|.+....-+.|-++.|+= .+|.+++.
T Consensus 267 ~---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 267 D---GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp S---SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred C---CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3 899999999999999877667777777764 46766664
No 129
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=84.78 E-value=0.64 Score=38.35 Aligned_cols=95 Identities=11% Similarity=0.109 Sum_probs=65.4
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
...+||.||-.|-.....|++.- ..+..|++. +++-..++.+ .+ -+...|+.-++| +|++|+.++.|.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~p----~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSGS--NNLTYVGGDMFTSIP----NADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCB--TTEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhcccC--CCcEEEeccccCCCC----CccEEEeehhhcc
Confidence 34689999999999888888653 445666654 3333333332 22 133466633666 3999999999999
Q ss_pred cChhhhccccccchhhcc----CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS----DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa----dglViF~G 194 (227)
++....-+.|-++.|+=. +|.+++.-
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 988777788888888744 68777764
No 130
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=84.25 E-value=0.87 Score=33.77 Aligned_cols=122 Identities=16% Similarity=0.018 Sum_probs=65.2
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
-.+||-+|..+......|.+....+..|||.- -++.+..+.+..--+--+..+|+.- +| .+|++||..-.....
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cC---CCCCEEEEcCCCccc
Confidence 35899999999988777777655578888864 2333444443221012244566643 33 489998865443333
Q ss_pred ChhhhccccccchhhccCceEEEec--CCCccchhhhhhcccCCccceeeee
Q 027139 170 SPKYLNKTLPDLARVASDGVLIFAG--YPGQQRAKVAELSKFGRPVSGILLL 219 (227)
Q Consensus 170 spryLNkTLPeLaRvsadglViF~G--~PgqqrakvaelsKfGrpak~~~~~ 219 (227)
+..-..+.|-++.|+. |.+...- .|+....-...+.+.|.-...+.-.
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEEEEE
Confidence 3222223344556665 4443333 4443332233455666544444333
No 131
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=83.82 E-value=1.1 Score=37.33 Aligned_cols=104 Identities=12% Similarity=0.158 Sum_probs=68.9
Q ss_pred hhHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc-ceeEeeecCCCCCCCCC
Q 027139 81 IPILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKS 156 (227)
Q Consensus 81 iP~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKG-iVRvADIkfpLPYR~kS 156 (227)
++.+-+.|. ..-.+||.||-.+-.....|++.- +.+..|++. +++-..++.+ .+ -+...|+.-|+| .
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~---~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL---PQVIENAPPL--SGIEHVGGDMFASVP---Q- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCC--TTEEEEECCTTTCCC---C-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh---HHHHHhhhhc--CCCEEEeCCcccCCC---C-
Confidence 355556664 345789999999999888887764 344555453 2332233322 22 133456644655 2
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027139 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 157 FslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (227)
|++|+.++.|.+++....-+.|-++.|+= .+|.+++.
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999999999998877668888888874 46777765
No 132
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=83.74 E-value=1.6 Score=35.53 Aligned_cols=100 Identities=11% Similarity=0.235 Sum_probs=67.7
Q ss_pred cceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh-hcc---ee--EeeecCCCCCCCCCccEEEecc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KGI---VR--VADIKFPLPYRAKSFPLVIVSD 164 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr-KGi---VR--vADIkfpLPYR~kSFslVIVSD 164 (227)
-.+||.||-.+-.....|++.- ..+..|++. +++-..++.... .|+ |+ ..|+.-+.++-+++|++|+.++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL---PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC---HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 5799999999998888888753 456667644 333333333322 232 33 3455433222457799999999
Q ss_pred cccccChhhhccccccchhhc-cCceEEEec
Q 027139 165 ALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 165 aLDyLspryLNkTLPeLaRvs-adglViF~G 194 (227)
.|.++++....+.|-++.|+= .+|.+++.-
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999988888898888864 467666643
No 133
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=83.55 E-value=1.2 Score=35.33 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=45.6
Q ss_pred ccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhh-hcceeEeeecCCCCCCCCCccEEEec
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVS 163 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFslVIVS 163 (227)
.-.+||-+|-.|..+...|.++ ...+.+|+|..+ ++-+..|++.+-- +--+..+|+.-++| ..+|++|+..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~n 183 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSN 183 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEEC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEEC
Confidence 3458999999998887777755 356888888653 4445555554311 11234456654554 5789998874
No 134
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=83.38 E-value=1.8 Score=36.25 Aligned_cols=95 Identities=15% Similarity=0.201 Sum_probs=61.5
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---ee--Eeeec-CCCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---VR--VADIK-FPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---VR--vADIk-fpLPYR~kSFslVIVSDa 165 (227)
.+||-||-.|-.+...+.+....+.+|||+-++ + ..++..++ .|+ |+ .+|+. +++| .+|++||....
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~--~-~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---~~~D~Ivs~~~ 125 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 125 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEEECCC
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHH--H-HHHHHHHHHcCCCCcEEEEEcchhhCCCC---CceeEEEEeCc
Confidence 589999999988877777776678999998753 3 34444443 233 33 45543 2444 57999988777
Q ss_pred ccccChhhhccccccchhh-ccCceEEEe
Q 027139 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
+.++....+-.++-++.|+ ..+|++++.
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7776654444445444443 567777754
No 135
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=82.13 E-value=1.5 Score=33.73 Aligned_cols=110 Identities=13% Similarity=0.028 Sum_probs=67.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeEeeecCCCCCCCCCccEEEeccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFslVIVSDaLD 167 (227)
=.+||-+|..|-...-.|.+. ..+.+|||+-+ ++-+..+++.+--. =-+..+|+.-.++.- .+|++|+....+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~- 132 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG- 132 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC-
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc-
Confidence 358999999997776666666 77899998643 44455555443222 123445665444433 479999876644
Q ss_pred ccChhhhccccccchh-hccCceEEEecCCCccch-hhhhhcccC
Q 027139 168 YLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQRA-KVAELSKFG 210 (227)
Q Consensus 168 yLspryLNkTLPeLaR-vsadglViF~G~Pgqqra-kvaelsKfG 210 (227)
.++ .+.++.| +...|.+++....-++-+ -...+.+.|
T Consensus 133 --~~~----~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 133 --SQA----LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHG 171 (204)
T ss_dssp --CHH----HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred --cHH----HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCC
Confidence 222 5666666 467889888875433333 334445555
No 136
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=81.81 E-value=0.56 Score=39.14 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=67.8
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh----h--hhcceeEee
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL----V--HKGIVRVAD 145 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsL----V--rKGiVRvAD 145 (227)
.|.+..+|.+.. ..-.+||.+|-.+..+...+++.. ..+..+||.-+ ++-+..+.+.+ . .+=-+..+|
T Consensus 64 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D 140 (314)
T 1uir_A 64 HETLVHPAMLTH---PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD 140 (314)
T ss_dssp HHHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC
T ss_pred HHHHHHHHHhcC---CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEch
Confidence 355555555432 234789999999999999998863 45677777543 22222222221 0 111245677
Q ss_pred ecCCCCCCCCCccEEEeccccccc---Ch-hh--hccccccchh-hccCceEEEe-cCCC
Q 027139 146 IKFPLPYRAKSFPLVIVSDALDYL---SP-KY--LNKTLPDLAR-VASDGVLIFA-GYPG 197 (227)
Q Consensus 146 IkfpLPYR~kSFslVIVSDaLDyL---sp-ry--LNkTLPeLaR-vsadglViF~-G~Pg 197 (227)
+.--++....+|++||+ |..+.. .| .. ....+-++.| +..+|++++. +.|.
T Consensus 141 ~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 199 (314)
T 1uir_A 141 ARAYLERTEERYDVVII-DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMIL 199 (314)
T ss_dssp HHHHHHHCCCCEEEEEE-ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCccEEEE-CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 65435545788999887 666554 22 11 1233444444 4667887765 4443
No 137
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=81.74 E-value=0.79 Score=35.76 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=58.2
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhh----hhhcceeEeeecCCCCCCCCCccEEEecc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL----VHKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsL----VrKGiVRvADIkfpLPYR~kSFslVIVSD 164 (227)
.+||-+|-.+-.....|++. ...+.+|+|.-+ ++.+..+++.. ...=-+..+|+.- +|+...+|++|+. |
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 178 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-SELPDGSVDRAVL-D 178 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG-CCCCTTCEEEEEE-E
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh-cCCCCCceeEEEE-C
Confidence 48999999988887777764 356788887532 44455554433 1111234466643 2444678999987 3
Q ss_pred cccccChhhhccccccchhh-ccCceEEEecC
Q 027139 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
. ..| ...|.++.|+ ..+|.+++...
T Consensus 179 ~---~~~---~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 179 M---LAP---WEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp S---SCG---GGGHHHHHHHEEEEEEEEEEES
T ss_pred C---cCH---HHHHHHHHHhCCCCCEEEEEeC
Confidence 2 222 3667777774 55676666553
No 138
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=81.66 E-value=2.6 Score=33.33 Aligned_cols=92 Identities=9% Similarity=0.064 Sum_probs=59.0
Q ss_pred ceeeeecCCcchhhhhcccc-----cccccccccccc--ccchhHHHHhhhhhcceeEeeecCC--CCCCCC-CccEEEe
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-----EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP--LPYRAK-SFPLVIV 162 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-----eetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfp--LPYR~k-SFslVIV 162 (227)
.+||-||-.|-.....|.+. ...+.+|||..+ ++-+. .+-.+=-+..+|+.-. ||+-.. +|++|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999988777666654 467899999765 33332 2211222456777654 565433 7999876
Q ss_pred cccccccChhhhccccccchh--hccCceEEEe
Q 027139 163 SDALDYLSPKYLNKTLPDLAR--VASDGVLIFA 193 (227)
Q Consensus 163 SDaLDyLspryLNkTLPeLaR--vsadglViF~ 193 (227)
..+ +. .+-+.|-++.| +...|++++.
T Consensus 159 d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 159 DNA--HA---NTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp ESS--CS---SHHHHHHHHHHHTCCTTCEEEEC
T ss_pred CCc--hH---hHHHHHHHHHHhhCCCCCEEEEE
Confidence 443 21 22346677775 7788999985
No 139
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=81.63 E-value=3 Score=33.92 Aligned_cols=100 Identities=14% Similarity=0.245 Sum_probs=63.7
Q ss_pred ccceeeeecCCc---chhhhhcccc--ccccccccccccccchhHHHHhhhh-hcce--eEeeecCC------------C
Q 027139 91 SMHKVLHVGPDT---CSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVH-KGIV--RVADIKFP------------L 150 (227)
Q Consensus 91 sM~kVLHVGPdt---C~VVs~LLkE--eetEAWGVEPydiedad~~CKsLVr-KGiV--RvADIkfp------------L 150 (227)
...+||.+|-.+ -.+ ..++.+ .+.+..||+.- ++.-...+.+.. .+-+ ..+|+.-+ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~-~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNT-HEVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCH-HHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChH-HHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 347999998777 544 344433 24677787753 222233333332 2323 45666321 3
Q ss_pred CCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEecC
Q 027139 151 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 151 PYR~kSFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
|+ .+|.+|+.+.+|.|+++.-..+.|-+++|+ ...|.++|+-.
T Consensus 154 d~--~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CT--TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CC--CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 33 389999999999999987778899999994 56677777653
No 140
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=81.49 E-value=0.97 Score=39.35 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=76.4
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeEeeecCC---CCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfp---LPYR~kSFslVIVSDaL 166 (227)
.+||-+|-.+-.+--.|.+. ..+.+|||..+ ++.|..|.+..- .+=-+..+|+.-. +|+...+|++|++
T Consensus 288 ~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~---- 362 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL---- 362 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE----
T ss_pred CEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE----
Confidence 57999999988777766665 67889998654 566776665321 1112455676543 4566778998875
Q ss_pred cccChhh--hccccccchhhccCceEEEecCCCccchhhhhhcccCC
Q 027139 167 DYLSPKY--LNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGR 211 (227)
Q Consensus 167 DyLspry--LNkTLPeLaRvsadglViF~G~PgqqrakvaelsKfGr 211 (227)
+|-| +...+..|++...+++|.++-+|.......+.+.+-|-
T Consensus 363 ---dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~tlard~~~l~~~Gy 406 (433)
T 1uwv_A 363 ---DPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGY 406 (433)
T ss_dssp ---CCCTTCCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ---CCCCccHHHHHHHHHhcCCCeEEEEECChHHHHhhHHHHHHCCc
Confidence 3444 44556677777889999999999987777777766553
No 141
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=81.26 E-value=0.74 Score=33.55 Aligned_cols=53 Identities=25% Similarity=0.365 Sum_probs=40.0
Q ss_pred cceeEeeecCCCCC---CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027139 139 GIVRVADIKFPLPY---RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (227)
Q Consensus 139 GiVRvADIkfpLPY---R~kSFslVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (227)
--+..+|+. .+|+ ...+|++|+.+.+|.|+.+ .+.+.|-++.|+= .+|.++|.
T Consensus 44 ~~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 44 GRVSVENIK-QLLQSAHKESSFDIILSGLVPGSTTL-HSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp SEEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEechh-cCccccCCCCCEeEEEECChhhhccc-CHHHHHHHHHHHCCCCEEEEEE
Confidence 345678886 3444 7899999999999999933 3578899999974 56777774
No 142
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=80.79 E-value=0.84 Score=34.77 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=57.4
Q ss_pred ccceeeeecCCcchhhhhcccc-c-cccccccccc--cccchhHHHHhh-h-hhcceeEeeecCCCCCCCCCccEEEecc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPY--DIEDADARCKSL-V-HKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPy--diedad~~CKsL-V-rKGiVRvADIkfpLPYR~kSFslVIVSD 164 (227)
.-.+||.+|-.+......|++. . ..+..|+|.- -++.+..+++.. = .+=-+..+|+.- +|+...+|++|+. |
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE-AELEEAAYDGVAL-D 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-CCCCTTCEEEEEE-E
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-cCCCCCCcCEEEE-C
Confidence 3358999999998877777765 2 5678888753 234444444322 0 111234456542 3455678999986 2
Q ss_pred cccccChhhhccccccchhhc-cCceEEEecC
Q 027139 165 ALDYLSPKYLNKTLPDLARVA-SDGVLIFAGY 195 (227)
Q Consensus 165 aLDyLspryLNkTLPeLaRvs-adglViF~G~ 195 (227)
. ....+.|.++.|+- .+|.+++.-.
T Consensus 174 ~------~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 174 L------MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp S------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred C------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 2 22346677777754 4566666553
No 143
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=80.67 E-value=0.89 Score=38.51 Aligned_cols=117 Identities=20% Similarity=0.197 Sum_probs=64.2
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhh---c------ceeEe
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---G------IVRVA 144 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrK---G------iVRvA 144 (227)
.|.+..+|.+.. ..-.+||.+|-.+..+...|++.. ..+..+||.-+ ++-..|+.-..+ | -+..+
T Consensus 95 ~e~l~~l~l~~~---~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~Ar~~~~~~~~~~~~~rv~~~~~ 169 (314)
T 2b2c_A 95 QEMLAHLPMFAH---PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE--MVIDVAKKFLPGMSCGFSHPKLDLFCG 169 (314)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH--HHHHHHHHHCTTTSGGGGCTTEEEECS
T ss_pred HHHHHHHHHhhC---CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHhccccCCCCEEEEEC
Confidence 455555665432 234799999999999999998863 45667776432 122233322221 2 24556
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-cCCC
Q 027139 145 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GYPG 197 (227)
Q Consensus 145 DIkfpLPYR~kSFslVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~Pg 197 (227)
|..-.|+....+|++||+ |+.|...|. .| ...+-++.| +..+|++++. |.|-
T Consensus 170 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 170 DGFEFLKNHKNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp CHHHHHHHCTTCEEEEEE-CCC-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred hHHHHHHhcCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 664334445678998885 777665442 12 344445554 4567877775 4554
No 144
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=80.44 E-value=1.5 Score=37.33 Aligned_cols=94 Identities=18% Similarity=0.327 Sum_probs=59.0
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh-c-----ceeEeeec-CCCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIK-FPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrK-G-----iVRvADIk-fpLPYR~kSFslVIVSDa 165 (227)
.+||-||-.|-.....+.+....+..|||+.++- ..++..+++ | -+..+|+. +++| .+|++||. +.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~---~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~Iv~-~~ 137 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMA---DHARALVKANNLDHIVEVIEGSVEDISLP---EKVDVIIS-EW 137 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTH---HHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEEEEE-CC
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHH---HHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceEEEE-cC
Confidence 5899999999888777777766689999987432 333333332 2 23445653 3454 78999876 55
Q ss_pred ccc-cCh-hhhccccccchh-hccCceEEEe
Q 027139 166 LDY-LSP-KYLNKTLPDLAR-VASDGVLIFA 193 (227)
Q Consensus 166 LDy-Lsp-ryLNkTLPeLaR-vsadglViF~ 193 (227)
+.| +.+ ..+.+.+-++.| +..+|++|+.
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 444 332 345555666644 4567777664
No 145
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=80.44 E-value=0.55 Score=35.49 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=58.9
Q ss_pred ceeeeecCCcchhhhhccccc------ccccccccccc--ccchhHHHHhhh------hhcceeEeeecCCCC---CCCC
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE------ETEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLP---YRAK 155 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe------etEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLP---YR~k 155 (227)
.+||.+|-.+......|.+.- +.+..|||+.+ ++-+..+++..- .+=-+..+|+.-.+| ....
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 589999999877666665543 35889998754 344555544331 111244566654321 3457
Q ss_pred CccEEEecccccccChhhhccccccchh-hccCceEEEecCC
Q 027139 156 SFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 196 (227)
Q Consensus 156 SFslVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 196 (227)
+|++|++...+..+ +.++.+ +..+|.++++-.|
T Consensus 162 ~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 89999998887643 344444 3557777776544
No 146
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=80.15 E-value=1.2 Score=34.37 Aligned_cols=123 Identities=17% Similarity=0.278 Sum_probs=70.6
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc--ee--EeeecCCCC--CCC
Q 027139 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLP--YRA 154 (227)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi--VR--vADIkfpLP--YR~ 154 (227)
++..||+.-..||-+|-.|-.....|.+.- +.+..|||..+ ++-+..+.+ +.|+ |+ .+|+.- +| +..
T Consensus 31 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~---~~~~~nv~~~~~d~~~-l~~~~~~ 106 (213)
T 2fca_A 31 WNTVFGNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK---DSEAQNVKLLNIDADT-LTDVFEP 106 (213)
T ss_dssp HHHHHTSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HSCCSSEEEECCCGGG-HHHHCCT
T ss_pred HHHHcCCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH---HcCCCCEEEEeCCHHH-HHhhcCc
Confidence 345678777899999999988887777653 57888998764 233333332 2332 33 356543 33 456
Q ss_pred CCccEEEecccccccChhh----h--ccccccchh-hccCceEEEec-CCCccchhhhhhcccC
Q 027139 155 KSFPLVIVSDALDYLSPKY----L--NKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAELSKFG 210 (227)
Q Consensus 155 kSFslVIVSDaLDyLspry----L--NkTLPeLaR-vsadglViF~G-~PgqqrakvaelsKfG 210 (227)
.+|+.|++.-...|...+. + -+.|.+++| +..+|.++|+- .+.+...-.+++.+.|
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 7899887532211221111 1 123556666 46778888865 4444433344444443
No 147
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=79.72 E-value=1.3 Score=34.32 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=62.2
Q ss_pred ccceeeeecCCcchhhhhcccc---cccccccccc--ccccchhHHHHhh------------------------------
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEP--YDIEDADARCKSL------------------------------ 135 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE---eetEAWGVEP--ydiedad~~CKsL------------------------------ 135 (227)
.-.+||.+|=.|-.+...|.+. ...+.+|||. --++-+..+.+..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3468999998888777666654 3567788764 3344455554433
Q ss_pred ---hhhcc----------eeEeeecCCCCC----CCCCccEEEecccccccCh-------hhhccccccchh-hccCceE
Q 027139 136 ---VHKGI----------VRVADIKFPLPY----RAKSFPLVIVSDALDYLSP-------KYLNKTLPDLAR-VASDGVL 190 (227)
Q Consensus 136 ---VrKGi----------VRvADIkfpLPY----R~kSFslVIVSDaLDyLsp-------ryLNkTLPeLaR-vsadglV 190 (227)
|+.++ +..+|+.-+++. ...+|++|+..-..-+... ..+.+.+.++.| +..+|.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22111 667787655542 3458998876433222221 222344555555 4678999
Q ss_pred EEecCCC
Q 027139 191 IFAGYPG 197 (227)
Q Consensus 191 iF~G~Pg 197 (227)
+|++..-
T Consensus 211 ~~~~~~~ 217 (250)
T 1o9g_A 211 AVTDRSR 217 (250)
T ss_dssp EEEESSS
T ss_pred EEeCcch
Confidence 9977543
No 148
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=78.77 E-value=1.6 Score=32.93 Aligned_cols=74 Identities=11% Similarity=-0.018 Sum_probs=46.0
Q ss_pred cccceeeeecCC-cchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEec
Q 027139 90 DSMHKVLHVGPD-TCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS 163 (227)
Q Consensus 90 dsM~kVLHVGPd-tC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVS 163 (227)
..-.+||-+|-. +......|.+....+.+|||.-+ ++-+..+++..--+=-+..+|+....++...+|++|+..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 345689999999 66655555544367788887643 344555544321122355677654556667899999853
No 149
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=78.07 E-value=0.46 Score=34.19 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=62.2
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCC---CCCCCCCccEEEecc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFP---LPYRAKSFPLVIVSD 164 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfp---LPYR~kSFslVIVSD 164 (227)
-.+||-+|-.+......+++....+.+|||..+ ++.+..+++..- .+--+..+|+.-. +|....+|++|+...
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 358999999998887778776667899998643 444555554331 1223555676433 233467899888644
Q ss_pred cccccChhhhccccccc--hh-hccCceEEEecCCCc
Q 027139 165 ALDYLSPKYLNKTLPDL--AR-VASDGVLIFAGYPGQ 198 (227)
Q Consensus 165 aLDyLspryLNkTLPeL--aR-vsadglViF~G~Pgq 198 (227)
. |. .....+.+-.+ .| +..+|++++.-...+
T Consensus 125 ~--~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 125 P--YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp C--GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred C--CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 3 22 22233334444 33 467788887654433
No 150
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=77.55 E-value=1.7 Score=33.90 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=56.8
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccccccc--cchhHHHHhhhhhcc-eeEeeecCC---CCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFP---LPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydi--edad~~CKsLVrKGi-VRvADIkfp---LPYR~kSFslVIVSDa 165 (227)
.+||-+|-.|-.....|.+.- ..+.+|||+.+- ++.-..++.. .++ ..++|+.-+ +|.. .+|++|+. |.
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~-~~ 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQ-DI 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEE-CC
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEE-ec
Confidence 489999999887666555432 457899987752 3333444432 222 234677765 3443 78999875 43
Q ss_pred ccccChhhhccccccchhh-ccCceEEEe
Q 027139 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
..|......+.++.|+ ..+|.++++
T Consensus 135 ---~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 ---AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 2232222336777876 556777776
No 151
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=77.14 E-value=1.3 Score=34.85 Aligned_cols=111 Identities=16% Similarity=0.162 Sum_probs=69.4
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc--eeE--eeecCCCC--CCC
Q 027139 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--VRV--ADIKFPLP--YRA 154 (227)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi--VRv--ADIkfpLP--YR~ 154 (227)
+.+.|+..-..||-+|-.+-.....|.+.. +...+|||+++ ++.+..+++ +.|+ |++ +|+.-.|| +..
T Consensus 27 ~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~---~~~l~nv~~~~~Da~~~l~~~~~~ 103 (218)
T 3dxy_A 27 FPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH---EEGLSNLRVMCHDAVEVLHKMIPD 103 (218)
T ss_dssp HHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HTTCSSEEEECSCHHHHHHHHSCT
T ss_pred HHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH---HhCCCcEEEEECCHHHHHHHHcCC
Confidence 567788888899999999988877777654 56799999874 333444433 2332 443 56543333 557
Q ss_pred CCccEEEecccccccChhhhc------cccccchh-hccCceEEEecCCC
Q 027139 155 KSFPLVIVSDALDYLSPKYLN------KTLPDLAR-VASDGVLIFAGYPG 197 (227)
Q Consensus 155 kSFslVIVSDaLDyLspryLN------kTLPeLaR-vsadglViF~G~Pg 197 (227)
.||+.|++.=..-|-..+... ..+.+++| +...|.++|+-.+.
T Consensus 104 ~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp TCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 899999875111122222221 25667777 56788888876543
No 152
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=76.96 E-value=1.3 Score=33.51 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=58.6
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCC--CCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY--RAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPY--R~kSFslVIVSDaL 166 (227)
.+||-+|..+......|.+. ...+.+|||+-+ ++++..+++.. ..=-+..+|+.-+..+ -..+|++|+ +|..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~-~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIF-EDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEE-ECCC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEE-ECCC
Confidence 48999999998777777654 246788887654 34555555544 2222445777653322 235899988 4543
Q ss_pred cccChhhhccccccchhh-ccCceEEEe
Q 027139 167 DYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
.|......+.++.|+ ..+|.++++
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 343333336677765 456777776
No 153
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=76.86 E-value=1.9 Score=32.76 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=64.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||-+|-.|-.....|.+.. .+.+|||..+ ++-+..+++..- .+--+..+|+.-.. ...+|++|+....+.+
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcCC
Confidence 589999999998888887764 7888888653 444555554332 12235567764333 4579999997766655
Q ss_pred cChhhhccccccchhh-ccCceEEEe
Q 027139 169 LSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~ 193 (227)
+.+..+.+.++.|+ ..+|++|+.
T Consensus 157 --~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 --PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp --GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred --cchhhhHHHHHHhhcCCcceeHHH
Confidence 44566688888886 566665554
No 154
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=76.73 E-value=1.6 Score=33.34 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=63.0
Q ss_pred ceeeeecCCcchhhhhcccc--ccccccccccccc--cchhHHHHhhhhhcceeEeeecCC--CCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPydi--edad~~CKsLVrKGiVRvADIkfp--LPYR~kSFslVIVSDaL 166 (227)
.+||-+|-.|-.....|++. ...+..|||..+- +++-.+++.. ..=-+..+|+.-+ +|.-..+|++|+. |..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~-~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA-DVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE-CCC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE-cCC
Confidence 58999999998888888776 3468899987642 5555555543 1112345677653 4555679999886 443
Q ss_pred cccChhhhccccccchhh-ccCceEEEecCC
Q 027139 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 196 (227)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~P 196 (227)
.|......+.++.|+ ..+|.++++=.|
T Consensus 157 ---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 157 ---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 443333346666654 557777775444
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=76.31 E-value=2.6 Score=35.45 Aligned_cols=99 Identities=20% Similarity=0.159 Sum_probs=59.7
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccc-hhHHHHhhhhhc--ceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIED-ADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydied-ad~~CKsLVrKG--iVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
.+||-||-.|-.....+.+....+.+|||+-++-+ |..+++..--.+ -+..+|+.- +|+...+|++||......++
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCBBTB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEEccccccc
Confidence 58999999998887777777667999999985222 333333221112 234456532 23446889998865433333
Q ss_pred -Chhhhccccccchhh-ccCceEEE
Q 027139 170 -SPKYLNKTLPDLARV-ASDGVLIF 192 (227)
Q Consensus 170 -spryLNkTLPeLaRv-sadglViF 192 (227)
....+.+.+-++.|+ ..+|++|+
T Consensus 147 ~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 147 FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 334555566666664 55677653
No 156
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=76.30 E-value=2.4 Score=33.44 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=63.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeEeeecC
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKF 148 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkf 148 (227)
.+..+.+-.|-+... -.+||-+|-.+-.....|.+. +..+.+|||..+ ++-+..+++..--.. -+..+|+.-
T Consensus 49 ~~~~~~l~~l~~~~~--~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQ--AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcC--CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334444444433322 369999999998777666654 257888888643 445555554332111 245567644
Q ss_pred CCCCCC--CCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 027139 149 PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (227)
Q Consensus 149 pLPYR~--kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (227)
.+|.-. .+|++|++ |+-.--.+.||++.. ..+..+|++|+..
T Consensus 127 ~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 127 SLESLGECPAFDLIFI-DADKPNNPHYLRWAL---RYSRPGTLIIGDN 170 (248)
T ss_dssp HHHTCCSCCCCSEEEE-CSCGGGHHHHHHHHH---HTCCTTCEEEEEC
T ss_pred HHHhcCCCCCeEEEEE-CCchHHHHHHHHHHH---HhcCCCeEEEEeC
Confidence 344433 48999886 442112234544433 2345678888754
No 157
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=76.04 E-value=3.1 Score=35.15 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=60.5
Q ss_pred cceeeeecCCcchhhhhcccccc-cccccccc--ccccchhHHHHhhhhhcc----eeEeeecCCCCC-CCCCccEEEec
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEP--YDIEDADARCKSLVHKGI----VRVADIKFPLPY-RAKSFPLVIVS 163 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee-tEAWGVEP--ydiedad~~CKsLVrKGi----VRvADIkfpLPY-R~kSFslVIVS 163 (227)
-.+||-+| .|-.+.-.|.+... .++.|||. --++-+..|++.+ |+ +..+|+.-+||- -..+|++||+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~---g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI---GYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH---TCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 46899999 98877666655543 67888874 3455566665533 43 456788767775 35689998864
Q ss_pred ccccccChhhhccccccchhhccC-c-eEEEecCC--Ccc
Q 027139 164 DALDYLSPKYLNKTLPDLARVASD-G-VLIFAGYP--GQQ 199 (227)
Q Consensus 164 DaLDyLspryLNkTLPeLaRvsad-g-lViF~G~P--gqq 199 (227)
-.. .+.-+.+-|.+..|+-.. | +++|+=.. +++
T Consensus 249 ~p~---~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~ 285 (373)
T 2qm3_A 249 PPE---TLEAIRAFVGRGIATLKGPRCAGYFGITRRESSL 285 (373)
T ss_dssp CCS---SHHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCH
T ss_pred CCC---chHHHHHHHHHHHHHcccCCeEEEEEEecCcCCH
Confidence 211 111133445556666554 7 54555433 554
No 158
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=75.55 E-value=1.4 Score=36.68 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=67.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-------ceeEeee-------cCCCCCCCCC
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-------IVRVADI-------KFPLPYRAKS 156 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-------iVRvADI-------kfpLPYR~kS 156 (227)
.+||-||=.|-....++++....+..||++-+ |+.|..+.+..-.+. -.+++|+ ..+-++-..+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~ 129 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGK 129 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSC
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCC
Confidence 57999998887777777777667788887764 455555554331110 1346666 1222344679
Q ss_pred ccEEEeccccccc-Chhhhccccccchhhcc-CceEEEec
Q 027139 157 FPLVIVSDALDYL-SPKYLNKTLPDLARVAS-DGVLIFAG 194 (227)
Q Consensus 157 FslVIVSDaLDyL-spryLNkTLPeLaRvsa-dglViF~G 194 (227)
|++|+...++-|+ ++.-..+.|-+++|+=. .|.+|++-
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999999886 44456789999999654 56666654
No 159
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=75.03 E-value=1.5 Score=31.80 Aligned_cols=72 Identities=14% Similarity=0.037 Sum_probs=39.5
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCC---CCCCccEEEe
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY---RAKSFPLVIV 162 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPY---R~kSFslVIV 162 (227)
.-.+||-+|-.|......+.+.. ..+..|||..+ ++-+..+++..-.+--+..+|+.-+++- ...+|++|+.
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 44689999999998888877764 45788888643 4445555443211122444566553331 2389999987
No 160
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=74.93 E-value=1.6 Score=34.02 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=51.7
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhh-----cc----eeEeeecCCCC--CCCCC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-----GI----VRVADIKFPLP--YRAKS 156 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrK-----Gi----VRvADIkfpLP--YR~kS 156 (227)
.-.+||-+|-.+-.....|.+.. +.+..|||..+ ++-+..+++.+-+. |+ +..+|+.-.|| +...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 45689999999999888888765 56899999764 45566666654211 22 44578765577 77889
Q ss_pred ccEEEec
Q 027139 157 FPLVIVS 163 (227)
Q Consensus 157 FslVIVS 163 (227)
|+.|++.
T Consensus 129 ~d~v~~~ 135 (246)
T 2vdv_E 129 LSKMFFC 135 (246)
T ss_dssp EEEEEEE
T ss_pred cCEEEEE
Confidence 9999854
No 161
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=74.59 E-value=1.3 Score=34.28 Aligned_cols=97 Identities=12% Similarity=0.189 Sum_probs=59.1
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhh--hcceeEeeecCCCC-CCCCCccEEEeccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLP-YRAKSFPLVIVSDA 165 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLP-YR~kSFslVIVSDa 165 (227)
-.+||-+|-.+-.....|.+. ...+..|||..+ ++-+..+++..-- +=-+..+|+.-.+| .-..+|++|++.-.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 368999999998877777663 267788888643 4555555543321 11355677765566 55789999985322
Q ss_pred ccccChhhhccccccchhhccCceEEE
Q 027139 166 LDYLSPKYLNKTLPDLARVASDGVLIF 192 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF 192 (227)
.. --++++++..+ .+..+|++++
T Consensus 152 ~~-~~~~~l~~~~~---~LkpgG~lv~ 174 (232)
T 3ntv_A 152 KA-QSKKFFEIYTP---LLKHQGLVIT 174 (232)
T ss_dssp SS-SHHHHHHHHGG---GEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---hcCCCeEEEE
Confidence 11 12334443332 2456788877
No 162
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=74.11 E-value=2.1 Score=35.09 Aligned_cols=105 Identities=20% Similarity=0.118 Sum_probs=57.9
Q ss_pred ceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhh------------hhcceeEeeecCCC-CCCCC
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV------------HKGIVRVADIKFPL-PYRAK 155 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsLV------------rKGiVRvADIkfpL-PYR~k 155 (227)
.+||-+|-.+-.....|.+. . ..+.+|+|..+ ++-+..+.+.+- .+=-+..+|+.-.+ ++...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 48999999998777777765 2 27889988654 444555554421 11224456765433 45566
Q ss_pred CccEEEecccccccChhhhccccccchhhcc-CceEEEe-cCCCccchhhh
Q 027139 156 SFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA-GYPGQQRAKVA 204 (227)
Q Consensus 156 SFslVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~-G~Pgqqrakva 204 (227)
+|++|+. |.. .|. ..++++.|+=. +|.+++. ....|-..-..
T Consensus 187 ~fD~V~~-~~~---~~~---~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 230 (336)
T 2b25_A 187 TFDAVAL-DML---NPH---VTLPVFYPHLKHGGVCAVYVVNITQVIELLD 230 (336)
T ss_dssp -EEEEEE-CSS---STT---TTHHHHGGGEEEEEEEEEEESSHHHHHHHHH
T ss_pred CeeEEEE-CCC---CHH---HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Confidence 8999886 433 332 26777777644 5555544 34444333333
No 163
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=72.55 E-value=1.9 Score=35.61 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=62.8
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcc-eeEeeecCCCCCCCCCccEEEecccccc
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGI-VRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGi-VRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
...+||.||..+-.....|++.- ..+..|++. .++-...+.+ .++ +...|+--|+| +|++|+.+..|.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~----~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ---PQVVGNLTGN--ENLNFVGGDMFKSIP----SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC---HHHHSSCCCC--SSEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc---HHHHhhcccC--CCcEEEeCccCCCCC----CceEEEEcccccC
Confidence 44689999999999888888763 334555543 2222222221 231 23456543655 4999999999999
Q ss_pred cChhhhccccccchhhcc----CceEEEec
Q 027139 169 LSPKYLNKTLPDLARVAS----DGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvsa----dglViF~G 194 (227)
++....-+.|-++.|+-. +|.+++.-
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 988766677888888744 68666643
No 164
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=72.38 E-value=5.1 Score=31.62 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=56.5
Q ss_pred ceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhh--hhcceeEeeecCCCCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.+||-+|-.+......|++. . ..+.+|+|..+ ++-+..+.+..- .+=-+..+|+.-.+ ...+|++|+. |
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~V~~-~-- 188 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--DEKDVDALFL-D-- 188 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--SCCSEEEEEE-C--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--cCCccCEEEE-C--
Confidence 48999999997777777765 3 56788887533 344444443321 11123446665443 3468999886 3
Q ss_pred cccChhhhccccccchhh-ccCceEEEecC
Q 027139 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
+.+..+.|.++.|+ ..+|.+++.-.
T Consensus 189 ----~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 189 ----VPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ----CSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33445667777765 45666666553
No 165
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=72.28 E-value=2.5 Score=33.22 Aligned_cols=72 Identities=13% Similarity=0.020 Sum_probs=46.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeEeeecCCCC-CCCCCccEEEec
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLP-YRAKSFPLVIVS 163 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLP-YR~kSFslVIVS 163 (227)
-.+||-+|-.|-.+--.|.+....+.+|||.-+ ++-+..|++..--. --+..+|+.-..+ +...+|++||..
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 458999999988777766666555888888643 44455555533211 2344567754443 457899999873
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=71.90 E-value=2.6 Score=32.06 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=61.4
Q ss_pred cceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeEeeecCCCCCCC-----CCccEE
Q 027139 92 MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRA-----KSFPLV 160 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~-----kSFslV 160 (227)
-++||-+|-.+-...-.|.+. ...+.+|||..+ ++-+..+++..--.. -+..+|..-.+|.-. .+|++|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 368999999887776666653 367889998754 455555555432111 245567633344433 689999
Q ss_pred EecccccccChhhhccccccchhhccCceEEEec--CCCc
Q 027139 161 IVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG--YPGQ 198 (227)
Q Consensus 161 IVSDaLDyLspryLNkTLPeLaRvsadglViF~G--~Pgq 198 (227)
++.-......+ ++ +.+-.+..+..+|++++.- .||.
T Consensus 139 ~~d~~~~~~~~-~~-~~~~~~~~LkpgG~lv~~~~~~~~~ 176 (221)
T 3u81_A 139 FLDHWKDRYLP-DT-LLLEKCGLLRKGTVLLADNVIVPGT 176 (221)
T ss_dssp EECSCGGGHHH-HH-HHHHHTTCCCTTCEEEESCCCCCCC
T ss_pred EEcCCcccchH-HH-HHHHhccccCCCeEEEEeCCCCcch
Confidence 86543433211 11 2222334567888888865 4553
No 167
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=71.64 E-value=1.4 Score=33.09 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=66.0
Q ss_pred chHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeEeee
Q 027139 73 CTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADI 146 (227)
Q Consensus 73 Ct~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADI 146 (227)
.+.+..+.+-.+.+... -.+||-+|..+-.....|++. +..+.+|||..+ ++-+..+++..--.. -+..+|.
T Consensus 48 ~~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQ--AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp CCHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cCHHHHHHHHHHHHhhC--CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 34444444444444332 358999999998777766654 367888888653 444555554332111 2445676
Q ss_pred cCCCCCCC-----CCccEEEecccccccChhhhccccccchh-hccCceEEEec--CCCc
Q 027139 147 KFPLPYRA-----KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG--YPGQ 198 (227)
Q Consensus 147 kfpLPYR~-----kSFslVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G--~Pgq 198 (227)
.-.+|.-. .+|++|++ |+- .....+.+.++.| +..+|++++.. ++|+
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~-~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~ 180 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYI-DAD----KANTDLYYEESLKLLREGGLIAVDNVLRRGQ 180 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEE-CSC----GGGHHHHHHHHHHHEEEEEEEEEECSSGGGG
T ss_pred HHHHHHhhhccCCCCccEEEE-CCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCc
Confidence 43343322 78999984 332 2222233444444 45678887743 4443
No 168
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=71.53 E-value=5.8 Score=33.26 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=57.0
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc-----eeEeeecCCCCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi-----VRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.+||-||-.|-.+...+.+....+..|||+-++ -..++..++ .|+ +..+|+. .+|+...+|++||.....
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~---~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEI---LYQAMDIIRLNKLEDTITLIKGKIE-EVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTH---HHHHHHHHHHTTCTTTEEEEESCTT-TSCCSCSCEEEEEECCCB
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHH---HHHHHHHHHHcCCCCcEEEEEeeHH-HhcCCCCcEEEEEEcCch
Confidence 489999999988777777766568999998753 233333332 232 3445653 234446789998865421
Q ss_pred ccc-Chhhhccccccchhh-ccCceEE
Q 027139 167 DYL-SPKYLNKTLPDLARV-ASDGVLI 191 (227)
Q Consensus 167 DyL-spryLNkTLPeLaRv-sadglVi 191 (227)
..+ ....+.+.|-++.|+ ..+|.+|
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 112 123344455555554 4567766
No 169
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=68.31 E-value=3.5 Score=37.26 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=63.5
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccch-------hHHHHhhhh-hcceeE--e-eecCCCCC--CC
Q 027139 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDA-------DARCKSLVH-KGIVRV--A-DIKFPLPY--RA 154 (227)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--ieda-------d~~CKsLVr-KGiVRv--A-DIkfpLPY--R~ 154 (227)
.=.+||-+|-.|-.+...|.+.- ..+.+|||..+ ++-| ..+|+.+-- -+-|++ + |..-+.|+ -.
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 34689999999999888887753 35799999765 2333 555554311 023443 3 33222232 23
Q ss_pred CCccEEEecccccccChhhhccccccchhhccC-ceEEEe
Q 027139 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVASD-GVLIFA 193 (227)
Q Consensus 155 kSFslVIVSDaLDyLspryLNkTLPeLaRvsad-glViF~ 193 (227)
.+|++|++++++ + . .-+++.|-++.|+-.. |.+++.
T Consensus 322 ~~FDvIvvn~~l-~-~-~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 322 PQCDVILVNNFL-F-D-EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGCSEEEECCTT-C-C-HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCCCEEEEeCcc-c-c-ccHHHHHHHHHHhCCCCeEEEEe
Confidence 689999988776 2 2 4677788899988775 555554
No 170
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=66.61 E-value=1.8 Score=33.05 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=56.6
Q ss_pred ceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh--hcceeEeeecCCCCCC--CCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYR--AKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLPYR--~kSFslVIVSDa 165 (227)
.+||-+|-.+......|.+.- ..+..|+|+.+ ++-+..+++..-- +=-+..+|..-.+|.- ..+|++|++...
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 135 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAA 135 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGG
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCC
Confidence 489999999877766665543 56788888643 3444444443211 1123445665545544 578999987554
Q ss_pred ccccChhhhccccccchhhccCceEEEe
Q 027139 166 LDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
.+ -.+++|+.... .+..+|++++.
T Consensus 136 ~~-~~~~~l~~~~~---~L~pgG~lv~~ 159 (233)
T 2gpy_A 136 KG-QYRRFFDMYSP---MVRPGGLILSD 159 (233)
T ss_dssp GS-CHHHHHHHHGG---GEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---HcCCCeEEEEE
Confidence 32 12344444332 24567888886
No 171
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=66.02 E-value=11 Score=31.10 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=54.0
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---e--eEeeecCCCCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---V--RvADIkfpLPYR~kSFslVIVSDaL 166 (227)
.+||-||-.|......+.+....+.+|||+-++ + ..++..++ .|+ | ..+|+. .+|....+|++||..-..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~--~-~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSI--I-EMAKELVELNGFSDKITLLRGKLE-DVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTH--H-HHHHHHHHHTTCTTTEEEEESCTT-TSCCSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHH--H-HHHHHHHHHcCCCCCEEEEECchh-hccCCCCcccEEEEeCch
Confidence 589999999988777777665568999998643 2 23333332 232 3 345553 123335789988764322
Q ss_pred cccC-hhhhccccccchhh-ccCceEE
Q 027139 167 DYLS-PKYLNKTLPDLARV-ASDGVLI 191 (227)
Q Consensus 167 DyLs-pryLNkTLPeLaRv-sadglVi 191 (227)
.++. ..-+.+.|-++.|+ ..+|++|
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2221 12233334444444 4567766
No 172
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=63.42 E-value=1.6 Score=35.68 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=65.4
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh---------hcceeEe
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---------KGIVRVA 144 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr---------KGiVRvA 144 (227)
.|.+..+|.+. -..-.+||.+|-.++.+...+++.. ..+.-+||.-+ ++-..|+.-.. +=-+.++
T Consensus 65 ~e~l~~~~l~~---~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~ 139 (283)
T 2i7c_A 65 HEMMTHVPMTV---SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE--TVIEVSKIYFKNISCGYEDKRVNVFIE 139 (283)
T ss_dssp HHHHHHHHHTT---SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred HHHHHHHHHhc---CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHhHHhccccCCCcEEEEEC
Confidence 45555566542 1234799999999999999998764 35666666432 12223332221 1135566
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEec
Q 027139 145 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFAG 194 (227)
Q Consensus 145 DIkfpLPYR~kSFslVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~G 194 (227)
|..--++-...+|++||+ |+.|...|. .| ...+-++.| +..+|++++..
T Consensus 140 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 140 DASKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CHHHHHHHCCSCEEEEEE-ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ChHHHHHhCCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 764334333678999886 665554432 11 233334444 46788888764
No 173
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=60.94 E-value=6 Score=32.40 Aligned_cols=110 Identities=16% Similarity=0.105 Sum_probs=61.7
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh----hhh-hcceeEeeec
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS----LVH-KGIVRVADIK 147 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs----LVr-KGiVRvADIk 147 (227)
.|.+..+|.+. -..-++||.+|-.+..+...+++.. .+..+||.-+ ++-+..+... +-. +=-+.++|..
T Consensus 59 ~e~l~~~~~~~---~~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~ 134 (262)
T 2cmg_A 59 SELLAHMGGCT---KKELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD 134 (262)
T ss_dssp HHHHHHHHHTT---SSCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG
T ss_pred HHHHHHHhhhc---CCCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHH
Confidence 34455555442 1234799999999999999999884 7778887542 1222222111 100 1123445643
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchh-hccCceEEEe-cCCCcc
Q 027139 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA-GYPGQQ 199 (227)
Q Consensus 148 fpLPYR~kSFslVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~-G~Pgqq 199 (227)
--+ .+|++||+ |+-| |.. .+.++.| +..+|++++. |.|..+
T Consensus 135 ~~~----~~fD~Ii~-d~~d---p~~---~~~~~~~~L~pgG~lv~~~~~~~~~ 177 (262)
T 2cmg_A 135 LDI----KKYDLIFC-LQEP---DIH---RIDGLKRMLKEDGVFISVAKHPLLE 177 (262)
T ss_dssp SCC----CCEEEEEE-SSCC---CHH---HHHHHHTTEEEEEEEEEEEECTTTC
T ss_pred HHH----hhCCEEEE-CCCC---hHH---HHHHHHHhcCCCcEEEEEcCCcccC
Confidence 212 78998886 5433 332 3445444 4567877764 566543
No 174
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=60.61 E-value=9.8 Score=27.80 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=58.3
Q ss_pred cceeeeecCCcchhhhhccccc---cccccccccccccchhHHHHhhhhhcceeEeeecCCC-------C----------
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE---ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-------P---------- 151 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe---etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpL-------P---------- 151 (227)
-.+||.+|-.|-.+...|.+.- ..+.+|||..++... ..=.+..+|+.-.. |
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccchhhhhhccccccccccchhh
Confidence 3689999988877766666553 578999998885321 11123345654321 1
Q ss_pred -------CCCCCccEEEecccccccChhhh---------ccccccchhh-ccCceEEEecCCCcc
Q 027139 152 -------YRAKSFPLVIVSDALDYLSPKYL---------NKTLPDLARV-ASDGVLIFAGYPGQQ 199 (227)
Q Consensus 152 -------YR~kSFslVIVSDaLDyLspryL---------NkTLPeLaRv-sadglViF~G~Pgqq 199 (227)
+...+|++|+..-++.+...... .+.|.+..|+ ..+|.+++.-+.+++
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 34568999986444444311111 1245556665 677888876554443
No 175
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=59.85 E-value=1.4 Score=35.44 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=54.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc--e---eEeeecCCCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--V---RVADIKFPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi--V---RvADIkfpLPYR~kSFslVIVSDa 165 (227)
.+||-+|-.|-.....|++....+.+||++-+ ++-+-.+.......+. + ..+|+..++ +...+|++|+.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~D~v~~~-- 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR-PSFTSIDVSFIS-- 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC-CSEEEECCSSSC--
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC-CCEEEEEEEhhh--
Confidence 58999999999888888887656899998753 3333333222111111 1 113333322 233344444322
Q ss_pred ccccChhhhccccccchhhc-cCceEEEecCC
Q 027139 166 LDYLSPKYLNKTLPDLARVA-SDGVLIFAGYP 196 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvs-adglViF~G~P 196 (227)
+.+.|+++.|+- .+|.++|.-.|
T Consensus 116 --------l~~~l~~i~rvLkpgG~lv~~~~p 139 (232)
T 3opn_A 116 --------LDLILPPLYEILEKNGEVAALIKP 139 (232)
T ss_dssp --------GGGTHHHHHHHSCTTCEEEEEECH
T ss_pred --------HHHHHHHHHHhccCCCEEEEEECc
Confidence 378999999985 56777765333
No 176
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=59.38 E-value=10 Score=29.62 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=61.3
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc--ceeE--eeec-CCCCCCCCCccEEEecc
Q 027139 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--IVRV--ADIK-FPLPYRAKSFPLVIVSD 164 (227)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKG--iVRv--ADIk-fpLPYR~kSFslVIVSD 164 (227)
..=.+||.||-.+-.....+.+....+.+|||+.+ +.-..++...++. -+++ .|.. ...+.-..+|..|+. |
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~--~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~-D 135 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY-D 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE-C
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCH--HHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE-e
Confidence 34468999999998877777776667899999873 4444444443332 2332 2321 234555788998863 4
Q ss_pred ccc-cc---Chhhhccccccchhhc-cCceEEEec
Q 027139 165 ALD-YL---SPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 165 aLD-yL---spryLNkTLPeLaRvs-adglViF~G 194 (227)
+.- .. .-.+..+.+-|++||= ..|+.+|..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 321 11 1123455677888864 567777753
No 177
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=58.17 E-value=7.6 Score=32.48 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=61.5
Q ss_pred ceeeeecCCcchhhhhcccccccccccccc--ccccchhHHHHhhhh--hcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP--YDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEP--ydiedad~~CKsLVr--KGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||-+|-.|...--. .+ ...+.+|||. --++.+..|++..-- +--+..+|+.-.+ .+|++||+ |.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~-dp--- 266 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIM-NL--- 266 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEE-CC---
T ss_pred CEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEE-CC---
Confidence 5899999999887666 65 5778889884 456677777664321 1224456765433 78998885 42
Q ss_pred cChhhhccccccchhh-ccCceEEEecC
Q 027139 169 LSPKYLNKTLPDLARV-ASDGVLIFAGY 195 (227)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~ 195 (227)
|++..+.+.++.++ ..+|++++..+
T Consensus 267 --P~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 267 --PKFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp --TTTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred --cHhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 66666777777766 46788887664
No 178
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=56.88 E-value=7.9 Score=33.06 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=66.2
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeEee
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVAD 145 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi------VRvAD 145 (227)
.|.+..+|.+.- ..-.+||.+|-.+..+...|++.. ..+..+||.-+ ++-+..+.+.+ ..|+ +..+|
T Consensus 107 ~e~L~~l~l~~~---~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~-~~gl~~~rv~~~~~D 182 (334)
T 1xj5_A 107 QEMITHLPLCSI---PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDV-AIGYEDPRVNLVIGD 182 (334)
T ss_dssp HHHHHHHHHTTS---SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGSTTEEEEESC
T ss_pred HHHHHHHHHhhC---CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEECC
Confidence 345555554421 233689999999999999999863 45677777543 22233333221 0122 45567
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhh---hccccccchh-hccCceEEEe-cCCCc
Q 027139 146 IKFPLP-YRAKSFPLVIVSDALDYLSPKY---LNKTLPDLAR-VASDGVLIFA-GYPGQ 198 (227)
Q Consensus 146 IkfpLP-YR~kSFslVIVSDaLDyLspry---LNkTLPeLaR-vsadglViF~-G~Pgq 198 (227)
..-.++ ....+|++||+ |..+...+.. ....+.++.| +..+|++++. +.|-.
T Consensus 183 ~~~~l~~~~~~~fDlIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 183 GVAFLKNAAEGSYDAVIV-DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp HHHHHHTSCTTCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred HHHHHHhccCCCccEEEE-CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 542232 23578998875 6554332211 1233444444 4578888885 45533
No 179
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=56.74 E-value=9 Score=32.97 Aligned_cols=104 Identities=11% Similarity=0.115 Sum_probs=64.6
Q ss_pred ceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh--hhcce--eEeeecCCCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV--HKGIV--RVADIKFPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV--rKGiV--RvADIkfpLPYR~kSFslVIVSDa 165 (227)
.+||-+|-.+..+-..+.+.. ..+..|||.-+ ++-+..|++..- .+--| ..+|+--++ ...+|++||....
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--EPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--CTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--CCCCeeEEEECCC
Confidence 689999999999888887765 67889988753 333444444321 11124 567765544 4679999987654
Q ss_pred ccc---cChhhhccccccchh-hccCceEEEecCCCc
Q 027139 166 LDY---LSPKYLNKTLPDLAR-VASDGVLIFAGYPGQ 198 (227)
Q Consensus 166 LDy---LspryLNkTLPeLaR-vsadglViF~G~Pgq 198 (227)
+.. +...-..+-+-++.| +..+|.+++.++..+
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 421 111112234566666 578899999875443
No 180
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=56.35 E-value=9.7 Score=32.59 Aligned_cols=107 Identities=16% Similarity=0.192 Sum_probs=60.8
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc-cccchhHHHHhhhhhcceeE--eee---cC-CCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY-DIEDADARCKSLVHKGIVRV--ADI---KF-PLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy-diedad~~CKsLVrKGiVRv--ADI---kf-pLPYR~kSFslVIVSDa 165 (227)
..||-+|-.|-..-..|++....+.+||+.- +|=+.. .+.- ...+.+ .|| .. .||. .+|++|++ |.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a--~r~~--~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~-d~ 159 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWK--LRQD--DRVRSMEQYNFRYAEPVDFTE--GLPSFASI-DV 159 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHH--HHTC--TTEEEECSCCGGGCCGGGCTT--CCCSEEEE-CC
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHH--HHhC--cccceecccCceecchhhCCC--CCCCEEEE-Ee
Confidence 5899999999988888888877789999884 333221 0100 011110 122 11 1332 36998775 54
Q ss_pred ccccChhhhccccccchhhccC-ceEEEecCCCccchhhhhhcccCC
Q 027139 166 LDYLSPKYLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAELSKFGR 211 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvsad-glViF~G~PgqqrakvaelsKfGr 211 (227)
. +. .|.+.||++.|+-.. |.+++.=-|- -.+.-.++.|.|-
T Consensus 160 s-f~---sl~~vL~e~~rvLkpGG~lv~lvkPq-fe~~~~~~~~~G~ 201 (291)
T 3hp7_A 160 S-FI---SLNLILPALAKILVDGGQVVALVKPQ-FEAGREQIGKNGI 201 (291)
T ss_dssp S-SS---CGGGTHHHHHHHSCTTCEEEEEECGG-GTSCGGGCC-CCC
T ss_pred e-Hh---hHHHHHHHHHHHcCcCCEEEEEECcc-cccChhhcCCCCc
Confidence 3 22 469999999998664 5665552332 2222234555553
No 181
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=56.22 E-value=8.7 Score=30.52 Aligned_cols=110 Identities=16% Similarity=0.145 Sum_probs=62.1
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeEee
Q 027139 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVAD 145 (227)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvAD 145 (227)
.+..+.+-.|.+..+ -++||-+|-.+-...-.|.+. ++.+.+|||..+ ++-+..+++. .|+ ++.+|
T Consensus 65 ~~~~~ll~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~i~~~~gd 139 (247)
T 1sui_A 65 ADEGQFLSMLLKLIN--AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK---AGVDHKIDFREGP 139 (247)
T ss_dssp HHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH---TTCGGGEEEEESC
T ss_pred HHHHHHHHHHHHhhC--cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCCeEEEECC
Confidence 344444444444333 358999999988776666553 257888988654 2334444432 233 44556
Q ss_pred ecCCCCCC------CCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027139 146 IKFPLPYR------AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 146 IkfpLPYR------~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
..--+|.- ..+|++|++ |+-.--.+.|+...++ .+..+|++++.
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~d 189 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFV-DADKDNYLNYHKRLID---LVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEE-CSCSTTHHHHHHHHHH---HBCTTCCEEEE
T ss_pred HHHHHHHHHhccCCCCCEEEEEE-cCchHHHHHHHHHHHH---hCCCCeEEEEe
Confidence 54333421 478999876 4422122455554432 35678888874
No 182
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=54.00 E-value=20 Score=29.27 Aligned_cols=67 Identities=13% Similarity=0.237 Sum_probs=44.4
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhc--ceeEeeecCCCCCCCCCc---cEEEe
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF---PLVIV 162 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKG--iVRvADIkfpLPYR~kSF---slVIV 162 (227)
.+||-+|-.|..+.-.|.++...+.+|||.. -++-+..|++.+--.+ -+..+|+.-+++ .+| ++|+.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Ivs 198 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMILS 198 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEEE
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEEE
Confidence 4899999999988888877756678888764 3455666665442111 234567655554 578 88765
No 183
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=52.67 E-value=10 Score=30.53 Aligned_cols=94 Identities=5% Similarity=-0.031 Sum_probs=59.3
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhc-c-eeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKG-I-VRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKG-i-VRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||-+|-.|...--.+.+....+.+|||.- -++.+..|++..--.. + +..+|+.-.++ ..+|++||. |.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~-~~--- 200 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM-GY--- 200 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE-CC---
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEE-CC---
Confidence 5899999999887777776655578898864 3666776665321122 2 45677755444 778999876 32
Q ss_pred cChhhhccccccchhhc-cCceEEEec
Q 027139 169 LSPKYLNKTLPDLARVA-SDGVLIFAG 194 (227)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G 194 (227)
|....+.+.++.|+- .+|++++..
T Consensus 201 --p~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 201 --VVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --chhHHHHHHHHHHHCCCCeEEEEEE
Confidence 222234555666654 456666644
No 184
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=52.60 E-value=6.8 Score=31.59 Aligned_cols=97 Identities=14% Similarity=0.020 Sum_probs=62.7
Q ss_pred ceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhh-hhcceeEeeecCCCCCCCCCccEEEecccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPy--diedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFslVIVSDaLDy 168 (227)
.+||-+|-.+...--.+.+. ...+.+|||.- -++.+..|++..- ..=.+..+|+.-. |. ..+|++||+.-
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~---- 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGY---- 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECC----
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECC----
Confidence 57999999998887777765 35688888854 4566666665321 1112456676544 55 67899987642
Q ss_pred cChhhhccccccchh-hccCceEEEecCCC
Q 027139 169 LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 197 (227)
Q Consensus 169 LspryLNkTLPeLaR-vsadglViF~G~Pg 197 (227)
|+-+.+.+.++.| +..+|+++++-++.
T Consensus 195 --p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 --VHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred --cccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 3344455555443 46788999888776
No 185
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=51.64 E-value=18 Score=29.46 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=59.0
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEecccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVSDaL 166 (227)
-.+||.+|-.+-.....|.+.. ..+..|||.-+ ++.+..+++..--.. -+..+|+.-.+| ...+|++|+....+
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVGV 154 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSBB
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCCH
Confidence 3589999999866655555442 23588888643 334444443221111 234566654343 45789999999999
Q ss_pred cccChhhhccccccch-hhccCceEEEecCCC
Q 027139 167 DYLSPKYLNKTLPDLA-RVASDGVLIFAGYPG 197 (227)
Q Consensus 167 DyLspryLNkTLPeLa-RvsadglViF~G~Pg 197 (227)
.++.. ++. .+..+|++++.-.|.
T Consensus 155 ~~~~~--------~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 155 DEVPE--------TWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SCCCH--------HHHHHEEEEEEEEEEBCBG
T ss_pred HHHHH--------HHHHhcCCCcEEEEEECCC
Confidence 88762 232 345678888876554
No 186
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=49.38 E-value=23 Score=26.36 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=54.4
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhcc--eeEeeecCCCCCCCCCccEEEeccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI--VRVADIKFPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKGi--VRvADIkfpLPYR~kSFslVIVSDa 165 (227)
-.+||-+|-.+......|.+.- ..+.+|||+.+ ++-+..+.+..--..- +..+|..-.+|.-.. |++|++. +
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~-~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD-C 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE-T
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc-C
Confidence 3589999999988777666542 57889998653 3334444432211111 344666444454446 9999764 2
Q ss_pred ccccChhhhccccccchh-hccCceEEEe
Q 027139 166 LDYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (227)
Q Consensus 166 LDyLspryLNkTLPeLaR-vsadglViF~ 193 (227)
-.--.+.+|+ ++.| +..+|++++.
T Consensus 135 ~~~~~~~~l~----~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 135 DVFNGADVLE----RMNRCLAKNALLIAV 159 (210)
T ss_dssp TTSCHHHHHH----HHGGGEEEEEEEEEE
T ss_pred ChhhhHHHHH----HHHHhcCCCeEEEEE
Confidence 1111133343 4433 4567888874
No 187
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=46.08 E-value=17 Score=31.95 Aligned_cols=106 Identities=20% Similarity=0.139 Sum_probs=69.1
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhcceeEeeecCCCCCCCCCccEEEeccccccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKGiVRvADIkfpLPYR~kSFslVIVSDaLDyL 169 (227)
-.+||-+|-.+-..-..|.+. ..+.+|||.. -+++|..|++..=-.--+..+|+.--++- +|++||+ |
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~---~fD~Vv~-d----- 360 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK---GFDTVIV-D----- 360 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT---TCSEEEE-C-----
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc---CCCEEEE-c-----
Confidence 358999999988877666654 5688999865 46677777653210112455676544432 8998886 3
Q ss_pred Chh--hhccccccchhhccCceEEEecCCCccchhhhhhc
Q 027139 170 SPK--YLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELS 207 (227)
Q Consensus 170 spr--yLNkTLPeLaRvsadglViF~G~Pgqqrakvaels 207 (227)
.|| +-.+.+..+.++..+|+|+++-+|...-...+.+.
T Consensus 361 PPr~g~~~~~~~~l~~l~p~givyvsc~p~tlarDl~~l~ 400 (425)
T 2jjq_A 361 PPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVKMLD 400 (425)
T ss_dssp CCTTCSCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHSS
T ss_pred CCccchHHHHHHHHHhcCCCcEEEEECChHHHHhHHhhCe
Confidence 232 12235666778889999999999977655555554
No 188
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=46.07 E-value=13 Score=29.48 Aligned_cols=72 Identities=15% Similarity=0.057 Sum_probs=44.9
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-----hhcceeEeeecCCC------CCCCCCc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-----HKGIVRVADIKFPL------PYRAKSF 157 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV-----rKGiVRvADIkfpL------PYR~kSF 157 (227)
-.+||-+|-.|-.+.-.|.+.. ..+..|||.-+ ++-+..|++.+- .+=-+..+|+.-.+ ++...+|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 3589999999887766665553 46788887643 334445544311 11234567876553 3567899
Q ss_pred cEEEec
Q 027139 158 PLVIVS 163 (227)
Q Consensus 158 slVIVS 163 (227)
++||..
T Consensus 117 D~Vv~n 122 (260)
T 2ozv_A 117 HHVIMN 122 (260)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 998864
No 189
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=45.69 E-value=15 Score=30.10 Aligned_cols=94 Identities=20% Similarity=0.309 Sum_probs=54.5
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-eeEeeecCCCCCC--CCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-VRVADIKFPLPYR--AKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi-VRvADIkfpLPYR--~kSFslVIVSDa 165 (227)
.+||-+|-.|-+..+.|.+- .+...+|||..+ +++.-..++. +.++ ...+|+.-|.+|. ..+|++|+ +|+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~~~~~D~I~-~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSVVENVDVLY-VDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTTCCCEEEEE-ECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhccccceEEEE-ecC
Confidence 57999988876665555432 356889988765 2232223322 1232 3468888776665 46899876 554
Q ss_pred ccccChhhhccccccchh--hccCceEEEe
Q 027139 166 LDYLSPKYLNKTLPDLAR--VASDGVLIFA 193 (227)
Q Consensus 166 LDyLspryLNkTLPeLaR--vsadglViF~ 193 (227)
-. | ..-+.|.+.++ +..+|.++++
T Consensus 155 a~---~-~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 155 AQ---P-DQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CC---T-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC---h-hHHHHHHHHHHHhCCCCeEEEEE
Confidence 32 1 11122333334 6678888876
No 190
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=45.34 E-value=24 Score=27.27 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=59.4
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeEeeec
Q 027139 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK 147 (227)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIk 147 (227)
..+..+.+-.|-+... -.+||-+|-.+......|.+. ++.+.+|||+.+ ++-+..+++..- .+=-+..+|..
T Consensus 57 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTG--AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CHHHHHHHHHHHHHHT--CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CHHHHHHHHHHHHhcC--CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3344444444433332 258999999988877666654 256788888653 333443333211 11123445542
Q ss_pred C---CCCCCC--CCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027139 148 F---PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 148 f---pLPYR~--kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
- .+|... .+|++|++ |+-.--.+.|++..+ ..+...|++++.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpgG~lv~~ 181 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFI-DADKRNYPRYYEIGL---NLLRRGGLMVID 181 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEE-CSCGGGHHHHHHHHH---HTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCcCEEEE-CCCHHHHHHHHHHHH---HHcCCCeEEEEe
Confidence 1 233333 78999875 432111134444443 234567888774
No 191
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=44.86 E-value=11 Score=32.66 Aligned_cols=37 Identities=30% Similarity=0.527 Sum_probs=28.4
Q ss_pred hhhhccccccchhhccCc-eEEEecCCCccchhhhhhcccC
Q 027139 171 PKYLNKTLPDLARVASDG-VLIFAGYPGQQRAKVAELSKFG 210 (227)
Q Consensus 171 pryLNkTLPeLaRvsadg-lViF~G~PgqqrakvaelsKfG 210 (227)
---+|+|||+|-+.+.++ .||+.| |+-+=.. ++-++|
T Consensus 195 stlvN~Tl~~lL~~~~~a~~vvl~G-PStp~~P--~lf~~G 232 (270)
T 3l5o_A 195 ASVVDKTLPRLLELSRNARRITLVG-PGTPLAP--VLFEHG 232 (270)
T ss_dssp HHHHHTCHHHHHHHTTTSSEEEEES-TTCCCCG--GGGGTT
T ss_pred ehhhcCCHHHHHhhCCCCCEEEEEC-CCchhhH--HHHhcC
Confidence 456999999999998776 788999 6655543 466776
No 192
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=44.81 E-value=9.3 Score=30.40 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=44.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeee-cCCCCCCCCCccEEEeccccccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADI-KFPLPYRAKSFPLVIVSDALDYL 169 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADI-kfpLPYR~kSFslVIVSDaLDyL 169 (227)
.+||-+||.|-..-..|++.. .+..|||.-+ ++-+..+++.. .+--+..+|+ ++++|- ..+| +|++|.-=+.
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~~~~~~-~~~~--~vv~nlPy~~ 106 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFKFPK-NQSY--KIFGNIPYNI 106 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCCCCS-SCCC--EEEEECCGGG
T ss_pred CEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHhCCccc-CCCe--EEEEeCCccc
Confidence 579999999999888887665 6788888643 23333343321 1223445665 334432 1334 7888865444
Q ss_pred Chhhh
Q 027139 170 SPKYL 174 (227)
Q Consensus 170 spryL 174 (227)
+..-+
T Consensus 107 ~~~~l 111 (244)
T 1qam_A 107 STDII 111 (244)
T ss_dssp HHHHH
T ss_pred CHHHH
Confidence 43333
No 193
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=43.92 E-value=15 Score=28.21 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=54.9
Q ss_pred cceeeeecCCcchhhhhccc-ccccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCC---CCCccEEEecc
Q 027139 92 MHKVLHVGPDTCSVVSTLLK-EEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYR---AKSFPLVIVSD 164 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLk-EeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR---~kSFslVIVSD 164 (227)
-.+||-+|-.|-..--.|.+ ....+..|||+-+ ++-+..+++.+--.. -+..+|+. .+|.. ..+|++|+...
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAE-TFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHH-HHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHH-HhcccccccCCccEEEEec
Confidence 35899999998765544443 3456788988754 344666655442112 13334552 13332 57899988644
Q ss_pred cccccChhhhccccccchhh-ccCceEEEe
Q 027139 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
+ .-+.+.+.++.|+ ..+|.+++.
T Consensus 150 -~-----~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 150 -V-----ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -C-----SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred -c-----CCHHHHHHHHHHhcCCCCEEEEE
Confidence 2 1134555566554 567777765
No 194
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=43.91 E-value=19 Score=30.20 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=66.6
Q ss_pred hHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCcc
Q 027139 82 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 82 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFs 158 (227)
+-+-++|. ..-.+||-||-.|-.....|++.- ..+..|++ +.++-...+.. .+=-+...|+--|+| +. +
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~-~~v~~~~~d~~~~~p---~~-D 263 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFD---LPHVIQDAPAF-SGVEHLGGDMFDGVP---KG-D 263 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEe---hHHHHHhhhhc-CCCEEEecCCCCCCC---CC-C
Confidence 33444553 345789999999999888888753 34455554 32222222211 111133467654676 23 9
Q ss_pred EEEecccccccChhhhccccccchhh-ccCceEEEec
Q 027139 159 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (227)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G 194 (227)
+|+.+.+|.++++...-+.|-++.|+ ..+|.+++.-
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999999988777788888876 4567666643
No 195
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=43.46 E-value=13 Score=29.14 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=62.8
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeEe
Q 027139 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 144 (227)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvA 144 (227)
..+..+.+-.|-+..+ -++||-+|..+......|++. ++.+..+||..+ ++-+..+++. .|+ ++..
T Consensus 55 ~~~~~~~l~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~g~~~~i~~~~g 129 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVN--AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK---AGVEHKINFIES 129 (237)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH---TTCGGGEEEEES
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCcEEEEEc
Confidence 3444445555444432 358999999998877766654 257888888653 2334444332 233 3445
Q ss_pred eecCCCCC------CCCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027139 145 DIKFPLPY------RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 145 DIkfpLPY------R~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
|..--+|- ...+|++|++ |+-.-..+.|++..++ .+..+|++++.
T Consensus 130 da~~~l~~l~~~~~~~~~fD~I~~-d~~~~~~~~~l~~~~~---~L~pGG~lv~d 180 (237)
T 3c3y_A 130 DAMLALDNLLQGQESEGSYDFGFV-DADKPNYIKYHERLMK---LVKVGGIVAYD 180 (237)
T ss_dssp CHHHHHHHHHHSTTCTTCEEEEEE-CSCGGGHHHHHHHHHH---HEEEEEEEEEE
T ss_pred CHHHHHHHHHhccCCCCCcCEEEE-CCchHHHHHHHHHHHH---hcCCCeEEEEe
Confidence 55322331 1468999885 4432223455555442 34567888774
No 196
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=41.59 E-value=12 Score=29.65 Aligned_cols=115 Identities=15% Similarity=0.168 Sum_probs=65.4
Q ss_pred chHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeEeee
Q 027139 73 CTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADI 146 (227)
Q Consensus 73 Ct~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADI 146 (227)
...+..+.+-.|-+..+ -++||-+|-.+-..--.|.+. ++.+.+|||..+ ++-+..+++..=-.. -+..+|.
T Consensus 44 i~~~~~~~l~~l~~~~~--~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTR--AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp CCHHHHHHHHHHHHHHT--CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred cCHHHHHHHHHHHhhcC--cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 44444455444444332 369999999887766655552 367889988654 666777766432222 2445666
Q ss_pred cCCCCCC-----CCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027139 147 KFPLPYR-----AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 147 kfpLPYR-----~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
.-.+|.- ..+|++|++ |+-.--.++||+..+ ..+...|++++.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpGG~lv~d 169 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFI-DADKTNYLNYYELAL---KLVTPKGLIAID 169 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEE-ESCGGGHHHHHHHHH---HHEEEEEEEEEE
T ss_pred HHHHHHHhhccCCCCEeEEEE-cCChHHhHHHHHHHH---HhcCCCeEEEEE
Confidence 4444432 478999876 332111123444332 234567888873
No 197
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=41.46 E-value=16 Score=28.88 Aligned_cols=118 Identities=13% Similarity=0.137 Sum_probs=69.2
Q ss_pred ccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh---hcc----eeEeeecCCCC--CCCCC
Q 027139 89 GDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLP--YRAKS 156 (227)
Q Consensus 89 GdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVr---KGi----VRvADIkfpLP--YR~kS 156 (227)
...-.+||-||-.+-.....|.+.- +....|||+.+ ++-|..+++.|-+ .++ +..+|+.-.|| +...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3455689999999988887777663 57889999875 4456666665421 222 34577765566 66789
Q ss_pred ccEEEecccccccChhhh----------ccccccchhh-ccCceEEEe-cCCCccchhhhhhcccC
Q 027139 157 FPLVIVSDALDYLSPKYL----------NKTLPDLARV-ASDGVLIFA-GYPGQQRAKVAELSKFG 210 (227)
Q Consensus 157 FslVIVSDaLDyLspryL----------NkTLPeLaRv-sadglViF~-G~PgqqrakvaelsKfG 210 (227)
|+.|++. |-.|-.- ...|-+++|+ ..+|.++|+ ..+.....-..++.+.|
T Consensus 124 ~D~v~~~----~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFL----FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEE----SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEe----CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 9998753 2233211 1245566665 456777775 34443333344444443
No 198
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=40.30 E-value=17 Score=26.29 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=55.8
Q ss_pred ceeeeecCCcchhhhhcccc-cc---------ccccccccccccchhHHHHhhhhhccee-EeeecCCC-------CCCC
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-EE---------TEAWGVEPYDIEDADARCKSLVHKGIVR-VADIKFPL-------PYRA 154 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-ee---------tEAWGVEPydiedad~~CKsLVrKGiVR-vADIkfpL-------PYR~ 154 (227)
.+||.+|-.+-.....|.+. .. .+.+|||+.++.... ++ -.. .+|+.-.- +...
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~-~~-------~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLE-GA-------TFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCT-TC-------EEECSCCTTSHHHHHHHHHHSGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCC-CC-------eEEEeccCCCHHHHHHHHHhcCC
Confidence 58999999997666666665 22 679999988753211 11 112 34543211 1224
Q ss_pred CCccEEEeccccccc-----Chhh----hccccccchhh-ccCceEEEecCCCcc
Q 027139 155 KSFPLVIVSDALDYL-----SPKY----LNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (227)
Q Consensus 155 kSFslVIVSDaLDyL-----spry----LNkTLPeLaRv-sadglViF~G~Pgqq 199 (227)
.+|++|+..-++++. .+.. +.+.+-+..|+ ..+|.+++.-+.+++
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 589998864333331 1111 12445566665 567888888655544
No 199
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=39.85 E-value=22 Score=29.21 Aligned_cols=68 Identities=21% Similarity=0.232 Sum_probs=39.2
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeEeee-cCCCCCCCCCccEEEecccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADI-KFPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADI-kfpLPYR~kSFslVIVSDaL 166 (227)
.+||-+|+.+-.....|++. ..+..|||..+ ++.+..+++..- .+=-+..+|+ +++++ +|++|+. |.-
T Consensus 44 ~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~----~~D~Vv~-n~p 115 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP----KFDVCTA-NIP 115 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC----CCSEEEE-ECC
T ss_pred CEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc----cCCEEEE-cCC
Confidence 58999999999988877765 56788888643 344444443210 1111334565 44433 7887764 543
No 200
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=39.73 E-value=40 Score=24.62 Aligned_cols=6 Identities=17% Similarity=0.551 Sum_probs=3.7
Q ss_pred eEEEec
Q 027139 189 VLIFAG 194 (227)
Q Consensus 189 lViF~G 194 (227)
+||++|
T Consensus 35 ~vi~~G 40 (228)
T 1uf3_A 35 AIALIG 40 (228)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 566666
No 201
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=37.31 E-value=9.6 Score=29.26 Aligned_cols=96 Identities=14% Similarity=0.188 Sum_probs=53.4
Q ss_pred ceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc--ceeEeeecCCCCC--------------
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPY-------------- 152 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPY-------------- 152 (227)
.+||-+|-.+......|.+.- ..+.+|||+.+ ++-+..+++..--.. -+..+|+.-.+|.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f 141 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDF 141 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccc
Confidence 589999999887777776653 56888988653 333444443211111 2344555332331
Q ss_pred C-C-CCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027139 153 R-A-KSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 153 R-~-kSFslVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
- . .+|++|++.-..+.+ +++ +.++.|+ ..+|++++.
T Consensus 142 ~~~~~~fD~I~~~~~~~~~-~~~----l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 142 AFGPSSIDLFFLDADKENY-PNY----YPLILKLLKPGGLLIAD 180 (239)
T ss_dssp CCSTTCEEEEEECSCGGGH-HHH----HHHHHHHEEEEEEEEEE
T ss_pred cCCCCCcCEEEEeCCHHHH-HHH----HHHHHHHcCCCeEEEEE
Confidence 1 1 689999875332211 233 4444443 457777775
No 202
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=37.30 E-value=25 Score=27.46 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=62.9
Q ss_pred hHHHHhhhhHHHHHhccc-cceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhh-cce--eEee
Q 027139 74 TSEIQRAIPILKKAYGDS-MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK-GIV--RVAD 145 (227)
Q Consensus 74 t~eV~~aiP~LkkaYGds-M~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrK-GiV--RvAD 145 (227)
..+..+.+-.|-+..+.. -.+||-+|..+-..--.|.+. .+.+..|||..+ ++-+..+.+..--. .-| +.+|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 345555566666555421 228999999887766656553 357888888754 34455554432111 223 3344
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027139 146 IKFPLP-YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (227)
Q Consensus 146 IkfpLP-YR~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (227)
..-.+| ....+|++|++ |+-.---++|++..++ .+...|++++.
T Consensus 118 a~~~l~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~d 162 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFG-QVSPMDLKALVDAAWP---LLRRGGALVLA 162 (221)
T ss_dssp HHHHGGGSCTTCEEEEEE-CCCTTTHHHHHHHHHH---HEEEEEEEEET
T ss_pred HHHHHHHhcCCCcCeEEE-cCcHHHHHHHHHHHHH---HcCCCcEEEEe
Confidence 422233 22679999976 4321112345444432 34567788774
No 203
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=36.60 E-value=28 Score=25.92 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=62.7
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc--ceeEeeec
Q 027139 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIK 147 (227)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIk 147 (227)
+.+..+.+-.|-+... -.+||-+|..+-.....|.+.- ..+..|||..+ ++-+..+++..--.. -+..+|..
T Consensus 43 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQG--ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp CHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444455544433332 3689999999888777666552 56888888654 444555554322111 23456653
Q ss_pred CCCCC---CC-CCccEEEecccccccChhhhccccccchh-hccCceEEEec
Q 027139 148 FPLPY---RA-KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 194 (227)
Q Consensus 148 fpLPY---R~-kSFslVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G 194 (227)
-.+|- .. .+|++|++ |+-.--.+.|++ ++.| +..+|++++..
T Consensus 121 ~~~~~~~~~~~~~fD~v~~-d~~~~~~~~~l~----~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFI-DADKQNNPAYFE----WALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEE-CSCGGGHHHHHH----HHHHTCCTTCEEEEES
T ss_pred HHHHHHHhcCCCCcCEEEE-cCCcHHHHHHHH----HHHHhcCCCcEEEEeC
Confidence 32332 11 57999875 332212234444 3333 45678777754
No 204
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=35.92 E-value=11 Score=29.48 Aligned_cols=69 Identities=16% Similarity=0.227 Sum_probs=42.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeEeeecCCCCCCC-CCccEEEeccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA-KSFPLVIVSDA 165 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~-kSFslVIVSDa 165 (227)
-.+||-+|+.+..+...|.+.. .+..|||.-+ ++-+..+++ ...+--+..+|+. .+|+.. .+| +|++|.
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~-~~~~~~~~~f--~vv~n~ 101 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDIL-QFQFPNKQRY--KIVGNI 101 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCT-TTTCCCSSEE--EEEEEC
T ss_pred CCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChh-hcCcccCCCc--EEEEeC
Confidence 3589999999998877777664 7889998643 344555554 1112234456763 234432 577 566763
No 205
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=35.65 E-value=29 Score=31.08 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=53.3
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccc-cchhHHHHhhhhhcc---e--eEeeec-CCCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI-EDADARCKSLVHKGI---V--RVADIK-FPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydi-edad~~CKsLVrKGi---V--RvADIk-fpLPYR~kSFslVIVSDa 165 (227)
.+||-||-.|-.+...+.+....+.+|||.-++ +-|..+.+. .|+ | ..+|+. +++| .+|++|+..-.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~---~gl~~~v~~~~~d~~~~~~~---~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKS---NNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHH---TTCTTTEEEEESCTTTCCCS---SCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHH---cCCCCcEEEEECchhhCccC---CCeEEEEEeCc
Confidence 589999999987766666655668899987652 113333322 233 3 344553 2444 57998775433
Q ss_pred ccccChhhhccccccchhh-ccCceEEE
Q 027139 166 LDYLSPKYLNKTLPDLARV-ASDGVLIF 192 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF 192 (227)
+.++...-+..++-++.|+ ..+|++++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 3444433333344444443 45677664
No 206
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=35.16 E-value=17 Score=29.87 Aligned_cols=104 Identities=22% Similarity=0.298 Sum_probs=56.5
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh----h-hhcceeEeeec-CCCCCCCCCccEEEe
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL----V-HKGIVRVADIK-FPLPYRAKSFPLVIV 162 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsL----V-rKGiVRvADIk-fpLPYR~kSFslVIV 162 (227)
-.+||.+|-.+..+...|++.. ..+..|||.-+ ++-+..+...+ . .+=-+..+|+. ++......+|++||+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 3689999999999999999763 45777777542 22222222111 1 11124566753 222223678999886
Q ss_pred cccccccCh-hhh--ccccccchhh-ccCceEEEec-CC
Q 027139 163 SDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFAG-YP 196 (227)
Q Consensus 163 SDaLDyLsp-ryL--NkTLPeLaRv-sadglViF~G-~P 196 (227)
|..+...| ..| ...+-++.|+ ..+|++++.. .|
T Consensus 176 -d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 176 -DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp -ECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred -CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 66655443 111 2334455554 5678877754 44
No 207
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=31.66 E-value=28 Score=28.97 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=33.7
Q ss_pred CCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 027139 154 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (227)
Q Consensus 154 ~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (227)
..+|++|+..+.|-|++|.-..+.+..+.++=..|=++|.|
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46899999999999999998899999999875555445555
No 208
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=31.65 E-value=37 Score=27.64 Aligned_cols=69 Identities=25% Similarity=0.299 Sum_probs=41.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeEeeec-CCCCCCCCCccEEEecccc
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK-FPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIk-fpLPYR~kSFslVIVSDaL 166 (227)
=.+||-+||.+......|++. ..+.+|||.-+ ++.+..+++..- .+=-+..+|+- +++| +|+.|+. +.-
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~----~fD~vv~-nlp 102 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP----FFDTCVA-NLP 102 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC----CCSEEEE-ECC
T ss_pred CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch----hhcEEEE-ecC
Confidence 358999999999988888765 45788888643 233333333210 11224456763 4555 6886655 443
No 209
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=30.67 E-value=41 Score=25.77 Aligned_cols=71 Identities=10% Similarity=-0.010 Sum_probs=42.9
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccccc--cccchhHHHHhhhhhc--ceeEeeecC----CCCCC-CCCccEEEe
Q 027139 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPY--DIEDADARCKSLVHKG--IVRVADIKF----PLPYR-AKSFPLVIV 162 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPy--diedad~~CKsLVrKG--iVRvADIkf----pLPYR-~kSFslVIV 162 (227)
.+||-+|-.|..+...|.+.- ..+..|||.. -++-|..+++..--.. -+..+|+.- +++-. ..+|++|+.
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~ 146 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMC 146 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEE
T ss_pred CEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEE
Confidence 489999999988777776653 4678888753 3455555554331111 234456431 34432 268999876
Q ss_pred c
Q 027139 163 S 163 (227)
Q Consensus 163 S 163 (227)
.
T Consensus 147 n 147 (254)
T 2h00_A 147 N 147 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 210
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=30.55 E-value=25 Score=30.26 Aligned_cols=113 Identities=13% Similarity=0.272 Sum_probs=62.2
Q ss_pred ceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhhhhcceeEeeecCCCC-CCCCCccEEEe------
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP-YRAKSFPLVIV------ 162 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLP-YR~kSFslVIV------ 162 (227)
.+||-+|-.+-.....|.+.-. .+..|+|..+ ++.+..+++.+=-.--+..+|..-..+ +...+|++|++
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg 327 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSA 327 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCC
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCc
Confidence 4899998887776666655432 5777777543 555666655432122345566644322 34468999986
Q ss_pred ccccc-------ccChhhh-------ccccccchh-hccCceEEEec---CCCccchhhhh
Q 027139 163 SDALD-------YLSPKYL-------NKTLPDLAR-VASDGVLIFAG---YPGQQRAKVAE 205 (227)
Q Consensus 163 SDaLD-------yLspryL-------NkTLPeLaR-vsadglViF~G---~Pgqqrakvae 205 (227)
+..+. ..+|.-+ .+.|-...+ +...|.++++- +|..+-..+.+
T Consensus 328 ~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~ 388 (429)
T 1sqg_A 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 (429)
T ss_dssp GGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred ccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHH
Confidence 11221 1222222 133444444 45678888865 56655544443
No 211
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=29.91 E-value=36 Score=28.75 Aligned_cols=39 Identities=23% Similarity=0.432 Sum_probs=25.4
Q ss_pred CCccEEEeccccc-ccChhhhccccccchhhccCceEEEecC
Q 027139 155 KSFPLVIVSDALD-YLSPKYLNKTLPDLARVASDGVLIFAGY 195 (227)
Q Consensus 155 kSFslVIVSDaLD-yLspryLNkTLPeLaRvsadglViF~G~ 195 (227)
+.|++||.+|.=. .|++.++ +.|-+.++ .--|+|++.|+
T Consensus 49 ~~yDvIIl~d~~~~~l~~~~~-~~L~~yV~-~GGgLi~~gG~ 88 (259)
T 3rht_A 49 AKQDLVILSDYPAERMTAQAI-DQLVTMVK-AGCGLVMLGGW 88 (259)
T ss_dssp HTCSEEEEESCCGGGBCHHHH-HHHHHHHH-TTCEEEEECST
T ss_pred hcCCEEEEcCCccccCCHHHH-HHHHHHHH-hCCeEEEecCc
Confidence 5899999998542 4666555 34566666 45666666663
No 212
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=29.70 E-value=9.8 Score=27.67 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=25.8
Q ss_pred hccccccchhhccCceEEEecCCCccchh
Q 027139 174 LNKTLPDLARVASDGVLIFAGYPGQQRAK 202 (227)
Q Consensus 174 LNkTLPeLaRvsadglViF~G~Pgqqrak 202 (227)
||+..+|-+.+-.+|..+|.|.+|+..-+
T Consensus 48 Ld~~~~~~v~v~v~g~~i~~G~~g~~~~~ 76 (96)
T 1o6a_A 48 LDKLTGEPVDILVNGKLIARGEVVVIDEN 76 (96)
T ss_dssp EEEETTCCEEEEETTEEEEEEEEEEETTE
T ss_pred eCCCCCCcEEEEECCEEEEEEEEEEECCE
Confidence 67888899999999999999999998654
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=29.69 E-value=8.6 Score=33.37 Aligned_cols=98 Identities=14% Similarity=0.232 Sum_probs=55.3
Q ss_pred eeeeecCCcchhhhhcccc-ccccccccccccccchhHHHHhhhh-----hcceeEeeec-CCCCCCCCCccEEEecccc
Q 027139 94 KVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH-----KGIVRVADIK-FPLPYRAKSFPLVIVSDAL 166 (227)
Q Consensus 94 kVLHVGPdtC~VVs~LLkE-eetEAWGVEPydiedad~~CKsLVr-----KGiVRvADIk-fpLPYR~kSFslVIVSDaL 166 (227)
+||++|-.++++...|++. .+.+..+||.-. ++-..|+.-.. +--|.++|.. |.-.+..++|++||+ |+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp--~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~-D~~ 168 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDA--ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR-DVF 168 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCH--HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE-CCS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCH--HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE-CCC
Confidence 8999999999999999983 455666765422 12333333221 2235567753 322344678998875 654
Q ss_pred cccC-hhhh--ccccccch-hhccCceEEEec
Q 027139 167 DYLS-PKYL--NKTLPDLA-RVASDGVLIFAG 194 (227)
Q Consensus 167 DyLs-pryL--NkTLPeLa-RvsadglViF~G 194 (227)
+... |..| -..+-++. ++..+|++++.-
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 4321 2222 11122333 456788877654
No 214
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=29.59 E-value=71 Score=26.71 Aligned_cols=104 Identities=12% Similarity=0.155 Sum_probs=66.3
Q ss_pred hHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeEeeecCCCCCCCCCcc
Q 027139 82 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (227)
Q Consensus 82 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFs 158 (227)
+-+-++|. ..-.+||-||-.|-.....|++.- +.+.-+ +|+.++-...+.. .+=-+...|+--|+| +. +
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~-~~v~~~~~D~~~~~p---~~-D 261 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVN---FDLPHVISEAPQF-PGVTHVGGDMFKEVP---SG-D 261 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE---EECHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEE---ecCHHHHHhhhhc-CCeEEEeCCcCCCCC---CC-C
Confidence 44445553 345789999999999888888753 334434 3333322222221 111233457644776 23 9
Q ss_pred EEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027139 159 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (227)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (227)
+|+.+.+|.++++...-+.|-++.|+ ..+|.+++.
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 99999999999988888888888886 457766664
No 215
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=29.29 E-value=61 Score=28.04 Aligned_cols=96 Identities=18% Similarity=0.265 Sum_probs=55.4
Q ss_pred ceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhhhhcc----eeEeeecCCCCCCCCCccEEEeccc
Q 027139 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVSDA 165 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPy--diedad~~CKsLVrKGi----VRvADIkfpLPYR~kSFslVIVSDa 165 (227)
.+||-||=.+-..-+-++.+ -..+..|||.- -++-|..+.+. .|+ +..+|.. .+| ..+|++|+++ +
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~---~gl~~v~~v~gDa~-~l~--d~~FDvV~~~-a 196 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG---LGVDGVNVITGDET-VID--GLEFDVLMVA-A 196 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH---HTCCSEEEEESCGG-GGG--GCCCSEEEEC-T
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh---cCCCCeEEEECchh-hCC--CCCcCEEEEC-C
Confidence 58999986543332232322 35667777643 24444444432 243 3345553 355 5799999975 3
Q ss_pred ccccChhhhccccccchhh-ccCceEEEecCCCcc
Q 027139 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 199 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 199 (227)
+ . .-..+.+.++.|+ ...|.+++...+|+.
T Consensus 197 ~---~-~d~~~~l~el~r~LkPGG~Lvv~~~~~~r 227 (298)
T 3fpf_A 197 L---A-EPKRRVFRNIHRYVDTETRIIYRTYTGMR 227 (298)
T ss_dssp T---C-SCHHHHHHHHHHHCCTTCEEEEEECCGGG
T ss_pred C---c-cCHHHHHHHHHHHcCCCcEEEEEcCcchh
Confidence 3 2 2234688899986 456777777766653
No 216
>3izc_W 60S ribosomal protein RPL22 (L22E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_W 3u5e_U 3u5i_U 4b6a_U
Probab=28.77 E-value=16 Score=29.17 Aligned_cols=23 Identities=43% Similarity=0.668 Sum_probs=19.1
Q ss_pred ccccChhhh-ccccccchhhccCc
Q 027139 166 LDYLSPKYL-NKTLPDLARVASDG 188 (227)
Q Consensus 166 LDyLspryL-NkTLPeLaRvsadg 188 (227)
|.||+.||| .+.|-|.-||=|.+
T Consensus 76 LKYLTKKyLKK~~LRDwlRVVa~~ 99 (121)
T 3izc_W 76 LKYLTKKYLKKNQLRDWIRFVSTK 99 (121)
T ss_dssp HHHHHHHHHTTSSSCCCCCCSSSC
T ss_pred HHHHHHHHhhhccccceEEEEecC
Confidence 889999999 55899999987654
No 217
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=27.63 E-value=40 Score=28.59 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=53.6
Q ss_pred ceeeeecC--------CcchhhhhccccccccccccccccccchhHHHHhhhhhcce-eEeeecCCCCCCCCCccEEEec
Q 027139 93 HKVLHVGP--------DTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIV-RVADIKFPLPYRAKSFPLVIVS 163 (227)
Q Consensus 93 ~kVLHVGP--------dtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiV-RvADIkfpLPYR~kSFslVIVS 163 (227)
.+||++|- .+ .+.++++.+ +.+..|||..+. +..=-+ ..+|+.- +|+. .+|++|+ |
T Consensus 65 ~~VLDLGcGsg~~~GpGs-~~~a~~~~~-~~~V~gvDis~~----------v~~v~~~i~gD~~~-~~~~-~~fD~Vv-s 129 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT-AVLRQWLPT-GTLLVDSDLNDF----------VSDADSTLIGDCAT-VHTA-NKWDLII-S 129 (290)
T ss_dssp CEEEEESCCCTTSBCHHH-HHHHHHSCT-TCEEEEEESSCC----------BCSSSEEEESCGGG-CCCS-SCEEEEE-E
T ss_pred CEEEEeCCCCCCCCCcHH-HHHHHHcCC-CCEEEEEECCCC----------CCCCEEEEECcccc-CCcc-CcccEEE-E
Confidence 47999987 44 455555542 356778876654 111113 4477742 3332 6899987 5
Q ss_pred ccc---------cccChhh-hccccccchhhc-cCceEEEecCCCccchhh-hhhcccC
Q 027139 164 DAL---------DYLSPKY-LNKTLPDLARVA-SDGVLIFAGYPGQQRAKV-AELSKFG 210 (227)
Q Consensus 164 DaL---------DyLspry-LNkTLPeLaRvs-adglViF~G~Pgqqrakv-aelsKfG 210 (227)
|.. |+....+ +...+.+..|+= ..|.++|.-+-+.+...+ ..+.++|
T Consensus 130 n~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~G 188 (290)
T 2xyq_A 130 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFS 188 (290)
T ss_dssp CCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEE
T ss_pred cCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcC
Confidence 532 2221111 124556666654 567777755433332233 3344443
No 218
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=26.16 E-value=61 Score=28.65 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=63.7
Q ss_pred hhhHHHHHhc------cccceeeeecCCcchhhhhcccc-ccccccccc--cccccchhHHHHhhhhhcceeEeeecCCC
Q 027139 80 AIPILKKAYG------DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVE--PYDIEDADARCKSLVHKGIVRVADIKFPL 150 (227)
Q Consensus 80 aiP~LkkaYG------dsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVE--Pydiedad~~CKsLVrKGiVRvADIkfpL 150 (227)
-+|.|..-|. ..-.+||-+|=.+=-+---+..+ ..++.|+++ +=-+|=+..|+..+=-.+-+++.|.--+.
T Consensus 115 RLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~ 194 (281)
T 3lcv_B 115 RLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR 194 (281)
T ss_dssp HGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC
T ss_pred HhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC
Confidence 3688888887 44668888875554443344444 566777752 11223345555443333456677755444
Q ss_pred CCCCCCccEEEecccccccChhhhccccccchhhccCceEE
Q 027139 151 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLI 191 (227)
Q Consensus 151 PYR~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglVi 191 (227)
| +-.|++|+..+++.+|...-=-.-+-=+.++.++|+||
T Consensus 195 p--~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvV 233 (281)
T 3lcv_B 195 L--DEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVV 233 (281)
T ss_dssp C--CSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEE
T ss_pred C--CCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEE
Confidence 3 66789998877777775431111111345678888776
No 219
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=24.99 E-value=24 Score=32.93 Aligned_cols=50 Identities=24% Similarity=0.349 Sum_probs=38.0
Q ss_pred ceeEeeec--CC---CCCCCCCccEEEecccccccChhhhccccccchhhccCceEEEec
Q 027139 140 IVRVADIK--FP---LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (227)
Q Consensus 140 iVRvADIk--fp---LPYR~kSFslVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (227)
-+|||.+. .+ +||=.--| .+.++|||-..|-.|+-|.|-.-+||+||--.
T Consensus 250 A~Rva~~~~~~~lPV~~Y~r~~Y-----~~~~~fLS~~DL~~TigesaalGa~GiViWGs 304 (424)
T 2pe4_A 250 AFRVAVAAGDPNLPVLPYVQIFY-----DTTNHFLPLDELEHSLGESAAQGAAGVVLWVS 304 (424)
T ss_dssp HHHHHHHTTCTTCCBCCEECSBC-----BTSCCBCCHHHHHTTHHHHHHTTCSEEEEECC
T ss_pred HHHHHhccCCCCCceEEEEeeEe-----cCccccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 35778663 22 44433222 68889999999999999999999999999754
No 220
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.76 E-value=36 Score=22.83 Aligned_cols=16 Identities=44% Similarity=0.627 Sum_probs=12.5
Q ss_pred CCCCcchhhHHHHHHH
Q 027139 29 RSSPLLSVGLVLVGAF 44 (227)
Q Consensus 29 rsspllsi~lv~vgai 44 (227)
++||..||+..++|.+
T Consensus 7 ~~~~~~~Ia~~vVGvl 22 (44)
T 2jwa_A 7 RASPLTSIISAVVGIL 22 (44)
T ss_dssp CCCSHHHHHHHHHHHH
T ss_pred CCCcccchHHHHHHHH
Confidence 4789988988888833
No 221
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=24.45 E-value=17 Score=30.65 Aligned_cols=43 Identities=7% Similarity=0.265 Sum_probs=35.2
Q ss_pred ccccChhhhccccccchhhccCceEEEe-cCCCccchhhhhhcc
Q 027139 166 LDYLSPKYLNKTLPDLARVASDGVLIFA-GYPGQQRAKVAELSK 208 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF~-G~PgqqrakvaelsK 208 (227)
+++..|.+.-..+-|+++--..++|+|| |+|.++..++.+..|
T Consensus 76 Ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~ 119 (297)
T 2yv2_A 76 IVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYAR 119 (297)
T ss_dssp EECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 3678899988999999999899899887 799887777776664
No 222
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=23.77 E-value=52 Score=27.12 Aligned_cols=112 Identities=10% Similarity=0.078 Sum_probs=61.7
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc-ceeEeeecCCCCCCCCCccEEEec----
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVS---- 163 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFslVIVS---- 163 (227)
.+||-+|-.+-..-..|.+. ...+..|+|..+ ++.+..+++.+--.. .+..+|+.-..+ -..+|++|++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-LNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-GCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-ccccCCEEEEeCCCC
Confidence 48999988887776666653 346778887653 555666665431111 233456543222 35689998861
Q ss_pred ---------ccccccChhhhc-------cccccchhh-ccCceEEEec---CCCccchhhhh
Q 027139 164 ---------DALDYLSPKYLN-------KTLPDLARV-ASDGVLIFAG---YPGQQRAKVAE 205 (227)
Q Consensus 164 ---------DaLDyLspryLN-------kTLPeLaRv-sadglViF~G---~Pgqqrakvae 205 (227)
|+....++..+. +.|-+..|+ ...|.++++- .|.+..+.+.+
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~ 260 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQW 260 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHH
Confidence 222223443332 344555554 5678888853 56555555554
No 223
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=23.09 E-value=25 Score=26.38 Aligned_cols=50 Identities=24% Similarity=0.513 Sum_probs=27.4
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchhhc--cCceEEEecCCCccchhhhhhcc
Q 027139 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA--SDGVLIFAGYPGQQRAKVAELSK 208 (227)
Q Consensus 148 fpLPYR~kSFslVIVSDaLDyLspryLNkTLPeLaRvs--adglViF~G~PgqqrakvaelsK 208 (227)
-|+|||.=.|+ ++.||| ++.||.+++. .+|-+++..-|.+.-|.++++-+
T Consensus 42 ~~iP~r~lGy~-----sl~~fL------~sipdvv~~~~~~~G~~~v~av~~~~t~HI~~lV~ 93 (102)
T 3s93_A 42 NHLPLRILGYR-----STMELV------LDMPDVVRVCPGAGGTVILKAIPDESTKGIASLVA 93 (102)
T ss_dssp SCCCTGGGTCS-----SHHHHH------HTCTTTEEEECCGGGCCEEEEC-------------
T ss_pred CcCCchhcCcC-----CHHHHH------HcCCCeEEEEecCCCCEEEEEEeCHHHHHHHHHHH
Confidence 58999986664 445554 7999999864 46788888888888888877644
No 224
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=23.00 E-value=27 Score=29.58 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=69.4
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhh--h-hcceeEeeecCCCCC---CCCCccEEEec
Q 027139 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLV--H-KGIVRVADIKFPLPY---RAKSFPLVIVS 163 (227)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLV--r-KGiVRvADIkfpLPY---R~kSFslVIVS 163 (227)
-.+||-+|-.|...--.+.+....+..|||.. -++.+..|++..= . +=-+..+|+.-.++. +..+|++||+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~- 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM- 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE-
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE-
Confidence 36899999999888777777666688898854 4667777765431 1 112445676433332 2468998875
Q ss_pred ccccccChhhh-------------ccccccc-hhhccCceEEEecCCCccch-----hh-hhhcccCCcccee
Q 027139 164 DALDYLSPKYL-------------NKTLPDL-ARVASDGVLIFAGYPGQQRA-----KV-AELSKFGRPVSGI 216 (227)
Q Consensus 164 DaLDyLspryL-------------NkTLPeL-aRvsadglViF~G~Pgqqra-----kv-aelsKfGrpak~~ 216 (227)
|. |++- .+.+.+. ..+..+|+++++-+|..... -+ ..+.+.|+....+
T Consensus 300 dp-----P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 300 DP-----PKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp CC-----SSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CC-----CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 32 2211 1112222 33567889999887765331 12 2344566655544
No 225
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=22.83 E-value=42 Score=25.10 Aligned_cols=67 Identities=16% Similarity=0.340 Sum_probs=39.1
Q ss_pred cccchhHHHHhhh--hhcceeEeeec--------CCCCCCCCCccEEEecccccccChhhhccccccchhh--ccCceEE
Q 027139 124 DIEDADARCKSLV--HKGIVRVADIK--------FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV--ASDGVLI 191 (227)
Q Consensus 124 diedad~~CKsLV--rKGiVRvADIk--------fpLPYR~kSFslVIVSDaLDyLspryLNkTLPeLaRv--sadglVi 191 (227)
|.|++...=.||+ .||-|-+.+|+ -|+|||.=-|+ ++.|+ =++.||..++ +.+|-++
T Consensus 10 ~~e~V~k~iRslL~S~k~gvtl~~L~~DYr~l~G~~iP~r~lGy~-----sl~~f------L~siPdvv~~~~~~~Gev~ 78 (89)
T 3rco_A 10 EGDLVSKMLRAVLQSHKNGVALPRLQGEYRSLTGDWIPFKQLGFP-----TLEAY------LRSVPAVVRIETSRSGEIT 78 (89)
T ss_dssp HHHHHHHHHHHHHHTCTTCEEHHHHHHHHHHHHSSCCCTTTTTCS-----SHHHH------HHTCTTTEEEEECTTSCEE
T ss_pred cHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCcCChhhhCcc-----cHHHH------HhcccCeEEEEecCCCCEE
Confidence 3444444444443 35555555543 59999986664 44444 4799999997 4588887
Q ss_pred EecCCCccch
Q 027139 192 FAGYPGQQRA 201 (227)
Q Consensus 192 F~G~Pgqqra 201 (227)
.-.-|.+..|
T Consensus 79 v~Av~~~~tA 88 (89)
T 3rco_A 79 CYAMACTETA 88 (89)
T ss_dssp EEECC-----
T ss_pred EEEEEccccc
Confidence 6666666544
No 226
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=21.74 E-value=41 Score=25.07 Aligned_cols=114 Identities=19% Similarity=0.146 Sum_probs=57.6
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeEeeec
Q 027139 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK 147 (227)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIk 147 (227)
..+..+.+-.+.+.- .-.+||.+|..+......|.+. +..+..|||..+ ++-+..+.+..- .+=-+..+|+.
T Consensus 54 ~~~~~~~l~~l~~~~--~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 131 (229)
T 2avd_A 54 TCEQAQLLANLARLI--QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL 131 (229)
T ss_dssp CHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CHHHHHHHHHHHHhc--CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHH
Confidence 334444443333332 2358999999988777666664 257888888653 333433333210 01113345542
Q ss_pred CCCC-C----CCCCccEEEecccccccChhhhccccccchh-hccCceEEEec
Q 027139 148 FPLP-Y----RAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 194 (227)
Q Consensus 148 fpLP-Y----R~kSFslVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G 194 (227)
-.+| . ...+|++|+. |+-.--.++++. ++.| +..+|++++..
T Consensus 132 ~~~~~~~~~~~~~~~D~v~~-d~~~~~~~~~l~----~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 132 ETLDELLAAGEAGTFDVAVV-DADKENCSAYYE----RCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHHHHHHHTTCTTCEEEEEE-CSCSTTHHHHHH----HHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCccEEEE-CCCHHHHHHHHH----HHHHHcCCCeEEEEEC
Confidence 1111 1 1168999886 432111123333 3333 45677887743
No 227
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=21.66 E-value=19 Score=25.53 Aligned_cols=29 Identities=10% Similarity=0.121 Sum_probs=25.5
Q ss_pred hccccccchhhccCceEEEecCCCccchh
Q 027139 174 LNKTLPDLARVASDGVLIFAGYPGQQRAK 202 (227)
Q Consensus 174 LNkTLPeLaRvsadglViF~G~Pgqqrak 202 (227)
||+..+|-..+-.+|..+|.|.+|...-+
T Consensus 44 Ld~~~~e~v~i~vng~~~~~ge~g~~~~~ 72 (84)
T 1o9y_A 44 VTGISPGHATLCHGEQVVAEGELVDVEGR 72 (84)
T ss_dssp ECSSCTTEEEEEETTEEEEEEEEEEETTE
T ss_pred eCCCCCCCEEEEECCEEEEEEEEEEECCE
Confidence 67888899999999999999999987654
No 228
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=21.33 E-value=65 Score=28.04 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=59.9
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc--e--eEeeecCCCC-CCCCCccEEEe-
Q 027139 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLP-YRAKSFPLVIV- 162 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi--V--RvADIkfpLP-YR~kSFslVIV- 162 (227)
.+||-+|-.+-..-..|.+. +..+.+|+|..+ ++.+..+++.+ |+ | ..+|..-..+ +...+|+.|++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM---GIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc---CCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 47999988777666666552 335777777654 45555555433 43 3 3356533222 44578999985
Q ss_pred -----cccc-------cccChhhh-------ccccccchhh-ccCceEEEec---CCCccchhhhh
Q 027139 163 -----SDAL-------DYLSPKYL-------NKTLPDLARV-ASDGVLIFAG---YPGQQRAKVAE 205 (227)
Q Consensus 163 -----SDaL-------DyLspryL-------NkTLPeLaRv-sadglViF~G---~Pgqqrakvae 205 (227)
+..+ -..+|..+ -+.|-+..++ ...|.++++- .|.+....+.+
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~ 403 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRW 403 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHH
Confidence 1111 12233333 2334455554 5578888654 55544444443
No 229
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=21.32 E-value=31 Score=29.59 Aligned_cols=26 Identities=23% Similarity=0.408 Sum_probs=21.6
Q ss_pred hhhccccccchhhccCc-eEEEecCCC
Q 027139 172 KYLNKTLPDLARVASDG-VLIFAGYPG 197 (227)
Q Consensus 172 ryLNkTLPeLaRvsadg-lViF~G~Pg 197 (227)
--+|+|+|+|-..+.++ .||+.|--.
T Consensus 196 TlvN~Ti~~lL~~~~~a~~vvl~GPS~ 222 (270)
T 2h1q_A 196 SVVDKTLPRLLELSRNARRITLVGPGT 222 (270)
T ss_dssp HHHHTCHHHHHHHTTTSSEEEEESTTC
T ss_pred eeecCCHHHHHHhCccCCeEEEEecCh
Confidence 36899999999888888 999999443
No 230
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=21.13 E-value=32 Score=29.37 Aligned_cols=106 Identities=14% Similarity=0.120 Sum_probs=61.9
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhh---hcceeEeeecCCCCC---CCCCccEEEecc
Q 027139 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVH---KGIVRVADIKFPLPY---RAKSFPLVIVSD 164 (227)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVr---KGiVRvADIkfpLPY---R~kSFslVIVSD 164 (227)
.+||-+|-.|..+--.+.+..-.+..|||.- -++.|..|.+..-- +--+..+|+.-.||. +..+|++||+ |
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~-D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII-D 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE-C
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE-C
Confidence 5899999999988777777655678888844 46777777664311 112455676433442 2458998875 3
Q ss_pred cccc-cChhhhcccccc---c-----hhhccCceEEEecCCCcc
Q 027139 165 ALDY-LSPKYLNKTLPD---L-----ARVASDGVLIFAGYPGQQ 199 (227)
Q Consensus 165 aLDy-LspryLNkTLPe---L-----aRvsadglViF~G~Pgqq 199 (227)
-=-+ .+...+...+.+ | ..+..+|+++++..+.+.
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 1000 000111112222 1 446788999998877664
No 231
>3iec_E 120 kDa protein, cytotoxicity-associated immunodominant antigen; protein-protein complex, kinase, virulence factor, alternati promoter usage; 2.20A {Helicobacter pylori}
Probab=21.09 E-value=20 Score=28.84 Aligned_cols=37 Identities=38% Similarity=0.458 Sum_probs=25.3
Q ss_pred hhccccccchhhccCceEEEecCCCccchhhhhhcccCCccc
Q 027139 173 YLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGRPVS 214 (227)
Q Consensus 173 yLNkTLPeLaRvsadglViF~G~PgqqrakvaelsKfGrpak 214 (227)
-||++.-.|-++ .=.+|+|-+.-+||.+|||-|+-++
T Consensus 51 ~ln~~as~~~~~-----g~~~gfplkr~~kV~DlSkvGlS~s 87 (125)
T 3iec_E 51 RLNQIASGLGGV-----GQAAGFPLKRHDKVDDLSKVGLSAS 87 (125)
T ss_pred hhhhHHHhhccc-----cccccchhhcccccccccccccccC
Confidence 455555444333 2246899999999999999988655
No 232
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=20.28 E-value=21 Score=29.98 Aligned_cols=43 Identities=12% Similarity=0.177 Sum_probs=34.7
Q ss_pred ccccChhhhccccccchhhccCceEEEe-cCCCccchhhhhhcc
Q 027139 166 LDYLSPKYLNKTLPDLARVASDGVLIFA-GYPGQQRAKVAELSK 208 (227)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF~-G~PgqqrakvaelsK 208 (227)
+++..|...-..+-|+++--..++|+|| |+|.++..++.+.+|
T Consensus 69 Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~ 112 (288)
T 1oi7_A 69 IIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIK 112 (288)
T ss_dssp EECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 3678899888888899888888899988 699887777766654
No 233
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=20.16 E-value=23 Score=25.94 Aligned_cols=66 Identities=21% Similarity=0.273 Sum_probs=39.8
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccccc-----------cccccccccccchhHHHHhhhhhcceeEe
Q 027139 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEET-----------EAWGVEPYDIEDADARCKSLVHKGIVRVA 144 (227)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeet-----------EAWGVEPydiedad~~CKsLVrKGiVRvA 144 (227)
.+.+|--.+.+.|-..+++ ..+.|....|...|-.++.. +..|+++- .+....+.|+++|+||..
T Consensus 10 ~l~ra~r~~~~~~~~~l~~-~gLt~~q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~~~~---tvsr~v~~Le~~glVr~~ 85 (148)
T 4fx0_A 10 TTRRAARQLGQAYDRALRP-SGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERT---TLTRNLEVMRRDGLVRVM 85 (148)
T ss_dssp HHHHHHHHHHHHHHHHHGG-GTCCHHHHHHHHHHHC---------CHHHHHHHHTCCHH---HHHHHHHHHHHTTSBC--
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHCCChh---hHHHHHHHHHHCCCEEee
Confidence 5677777777777766654 45666666666666554432 23444443 356788999999999976
Q ss_pred e
Q 027139 145 D 145 (227)
Q Consensus 145 D 145 (227)
|
T Consensus 86 ~ 86 (148)
T 4fx0_A 86 A 86 (148)
T ss_dssp -
T ss_pred C
Confidence 5
Done!