Query 027140
Match_columns 227
No_of_seqs 142 out of 628
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 08:43:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027140.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027140hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lnwa_ a.4.5.28 (A:) MexR rep 78.5 1.3 9.1E-05 31.4 4.6 61 122-186 64-134 (141)
2 d1s3ja_ a.4.5.28 (A:) Putative 73.4 1.9 0.00014 30.3 4.4 61 122-186 63-133 (143)
3 d3dwya1 a.29.2.1 (A:1084-1197) 69.9 2.8 0.0002 28.8 4.5 69 26-94 3-75 (114)
4 d3deua1 a.4.5.28 (A:2-141) Tra 65.8 3.4 0.00025 28.8 4.3 61 122-186 60-130 (140)
5 d1w7ca2 d.17.2.1 (A:43-169) Ly 55.2 3.1 0.00022 29.6 2.3 19 168-186 16-34 (127)
6 d1jgsa_ a.4.5.28 (A:) Multiple 54.4 4.5 0.00033 28.1 3.2 62 121-186 61-133 (138)
7 d1lj9a_ a.4.5.28 (A:) Transcri 54.0 11 0.00078 26.3 5.3 61 122-186 57-127 (144)
8 d2fbha1 a.4.5.28 (A:8-144) Tra 53.5 7.2 0.00053 26.8 4.2 61 122-186 57-127 (137)
9 d2bwba1 a.5.2.1 (A:328-371) DS 53.1 3.2 0.00023 23.9 1.7 41 124-169 4-44 (44)
10 d2fbia1 a.4.5.28 (A:5-140) Pro 52.1 2.2 0.00016 29.8 1.0 62 121-186 57-128 (136)
11 d3broa1 a.4.5.28 (A:3-137) Tra 52.0 11 0.00079 25.7 5.0 61 122-186 59-129 (135)
12 d2a61a1 a.4.5.28 (A:5-143) Tra 51.2 2.3 0.00016 29.8 1.0 62 121-186 57-128 (139)
13 d2etha1 a.4.5.28 (A:1-140) Put 49.1 11 0.00079 25.9 4.6 62 121-186 59-130 (140)
14 d2elca1 a.46.2.1 (A:1-52) Anth 48.1 3.2 0.00024 24.5 1.2 16 173-188 29-44 (52)
15 d1o17a1 a.46.2.1 (A:1-70) Anth 46.3 1.5 0.00011 27.5 -0.7 35 173-213 32-66 (70)
16 d1khda1 a.46.2.1 (A:12-80) Ant 44.5 5.8 0.00042 24.4 2.2 23 166-188 23-46 (69)
17 d2c0ga1 a.71.1.1 (A:1146-1251) 44.2 14 0.00099 25.1 4.3 36 101-136 63-98 (106)
18 d1g7da_ a.71.1.1 (A:) Endoplas 41.2 13 0.00094 25.1 3.8 35 102-136 63-97 (106)
19 d1z91a1 a.4.5.28 (A:8-144) Org 39.7 26 0.0019 23.7 5.5 59 121-185 60-128 (137)
20 d1ttea1 a.5.2.1 (A:161-215) Ub 37.3 7.6 0.00055 23.3 1.7 14 126-139 24-37 (55)
21 d2tpta1 a.46.2.1 (A:1-70) Thym 31.0 6.1 0.00044 24.4 0.5 17 173-189 33-49 (70)
22 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 28.3 14 0.00099 21.7 1.7 42 123-169 6-47 (50)
23 d2fbka1 a.4.5.28 (A:8-179) Tra 28.3 12 0.00084 27.0 1.8 60 123-186 94-163 (172)
24 d1brwa1 a.46.2.1 (A:1-70) Pyri 28.0 10 0.00073 23.3 1.2 16 173-188 32-47 (70)
25 d1r7ja_ a.4.5.49 (A:) Sso10a ( 27.0 16 0.0012 23.9 2.1 36 117-153 28-66 (90)
26 d1stza1 a.4.5.51 (A:14-100) He 26.6 16 0.0012 23.7 2.1 27 122-148 39-70 (87)
27 d2bv6a1 a.4.5.28 (A:5-140) Tra 24.7 63 0.0046 21.5 5.3 57 122-184 62-128 (136)
28 d2daha1 a.5.2.1 (A:8-48) Ubiqu 24.0 15 0.0011 20.6 1.3 17 125-141 2-18 (41)
29 d1mzga_ d.224.1.1 (A:) SufE (Y 22.9 13 0.00094 26.5 1.1 50 166-217 82-136 (144)
30 d1rwsa_ d.15.3.2 (A:) Hypothet 21.0 11 0.00082 23.4 0.3 27 127-153 23-49 (68)
31 d2ct5a1 g.37.1.6 (A:8-67) Zinc 20.7 9.7 0.00071 23.1 -0.0 23 133-155 5-28 (60)
32 d1s7oa_ a.4.13.3 (A:) Hypothet 20.3 32 0.0023 22.9 2.7 40 170-217 29-68 (106)
33 d1o7fa3 b.82.3.2 (A:322-445) R 20.3 25 0.0019 23.1 2.2 32 159-190 6-37 (124)
No 1
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=78.46 E-value=1.3 Score=31.45 Aligned_cols=61 Identities=15% Similarity=0.124 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhHcCCccC-----C-----CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 122 RDELKNRSRVLKKLGHINA-----D-----GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~-----~-----~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
.+...+.++.|.+.|||.. | -.+|.||+-+.+-. .-..+-+.+.+|++++++|...++.++
T Consensus 64 ~~~vsr~l~~L~~~G~v~r~~~~~D~R~~~l~lT~~G~~~~~~~----~~~~~~~~~~~~~~ls~~e~~~l~~~L 134 (141)
T d1lnwa_ 64 KALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHA----EAIMSRVHDELFAPLTPVEQATLVHLL 134 (141)
T ss_dssp HHHHHHHHHHHHHTTSEEEEECSSSSSSEEEEECHHHHHHHHHH----HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHhhceeeeccCCCCcchhhccCHHHHHHHHHH----HHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4777889999999999952 2 28999999765543 235566778888999999998887654
No 2
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=73.38 E-value=1.9 Score=30.34 Aligned_cols=61 Identities=10% Similarity=-0.025 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhHcCCcc----C-C-----CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 122 RDELKNRSRVLKKLGHIN----A-D-----GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid----~-~-----~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
.+...+.++-|.+.|||. . | -.+|.+|+-.++-.- -..+-.+..+|.+++++|+..+...|
T Consensus 63 ~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT~~G~~~~~~~~----~~~~~~~~~~~~~l~~~e~~~l~~~l 133 (143)
T d1s3ja_ 63 PSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVL----AGRKAIMARYLSFLTEEEMLQAAHIT 133 (143)
T ss_dssp HHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHHHHHH----HHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhheeeeecCCCCceEEEECHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 577888999999999995 2 2 389999998887542 23334667789999999998887655
No 3
>d3dwya1 a.29.2.1 (A:1084-1197) CREB-binding protein, CBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.92 E-value=2.8 Score=28.77 Aligned_cols=69 Identities=22% Similarity=0.394 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCCCCCCCccccCCCCChHHHHHHH---HHHHHHHHHHcCCCCCC-ChHHHHH
Q 027140 26 RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN---QIEELEHKLFAHPLNKS-QDENQIR 94 (227)
Q Consensus 26 ~~~~~~~~~~~~l~~~~~~~~~~~p~l~p~~~~ki~~~~~~~~~~---~~~~l~~~l~~~p~~~c-~~~~~~~ 94 (227)
++.+-++.+...++++.+.-+...|+.+|+.--....+++.+.+. .+..+++++.++-..+- .|...+.
T Consensus 3 ~p~el~~~l~~~l~~l~~~~p~a~pF~~pvd~~~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~s~~ef~~Dv~ 75 (114)
T d3dwya1 3 KPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVW 75 (114)
T ss_dssp CHHHHHHHHHHHHHHHHTCTTTTGGGSSCCCHHHHTCTTHHHHCSSCCCHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCcCCCccCCCCChhhccCCCHHHHcCCCCCHHHHHHHHHcCccccHHHHHHHHH
Confidence 344557778888888876656778999997532222355666554 36777788887766543 4444333
No 4
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=65.75 E-value=3.4 Score=28.75 Aligned_cols=61 Identities=13% Similarity=0.068 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhHcCCccC----C------CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 122 RDELKNRSRVLKKLGHINA----D------GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~----~------~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
.+...+.++-|.+-|||.. + -.+|.+|+-+++-.. . .-+-+...+|.+++|+|...+.+.|
T Consensus 60 ~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT~~G~~~~~~~~--~--~~~~~~~~~~~~l~~ee~~~~~~~L 130 (140)
T d3deua1 60 QPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIAEME--E--VIHKTRGEILAGISSEEIELLIKLI 130 (140)
T ss_dssp HHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHHHHH--H--HHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCEEecccCCCCCceeeEECHHHHHHHHHHH--H--HHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4567789999999999952 2 369999998876442 1 2345566778999999998887755
No 5
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]}
Probab=55.24 E-value=3.1 Score=29.55 Aligned_cols=19 Identities=11% Similarity=0.284 Sum_probs=17.6
Q ss_pred hCCCCCCCHHHHHHHhhhc
Q 027140 168 NGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 168 ~g~f~~L~p~eiaAllS~~ 186 (227)
.|+|.+|+++|++|+.+-+
T Consensus 16 ~nv~adLt~~E~~aV~~~L 34 (127)
T d1w7ca2 16 TNIWTSLAKEEVQEVLDLL 34 (127)
T ss_dssp CCTTCCCCHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHH
Confidence 4899999999999999888
No 6
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=54.37 E-value=4.5 Score=28.13 Aligned_cols=62 Identities=21% Similarity=0.188 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhHcCCccC-----C-----CccchhhHHhh-hhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 121 FRDELKNRSRVLKKLGHINA-----D-----GVVQLKGRAAC-LIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 121 l~~e~~~~~~VL~~Lgyid~-----~-----~~vt~KGrvAc-eI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
-.+.-.+.+.-|.+.|||.. | -.+|.+|+-.. .+.. .+.+-+.+-+|++++++|+..+...+
T Consensus 61 ~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~~~~~~~----~~~~~~~~~~~~~l~~~e~~~l~~~L 133 (138)
T d1jgsa_ 61 DLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQ----LVGQDLHQELTKNLTADEVATLEYLL 133 (138)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHHHHHH----HHHHHHHHHHHTTTTTTCHHHHHHHH
T ss_pred CHhHHHHHHHHHhhCCCEEEeeccCCCCeeEEEECHHHHHHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 35677888999999999952 2 27999999876 3332 12233445567888888888876654
No 7
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=54.00 E-value=11 Score=26.25 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhHcCCccC-----C-----CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 122 RDELKNRSRVLKKLGHINA-----D-----GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~-----~-----~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
.+...+.++-|.+.|||.. | -.+|.+|+-.++--. + .-+-...-+|.+++|+++..+...|
T Consensus 57 ~~tvs~~l~~L~~~glI~r~~~~~D~R~~~l~LT~~G~~~~~~~~--~--~~~~~~~~~~~~l~~ee~~~l~~~L 127 (144)
T d1lj9a_ 57 RTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIV--R--ENQHSNQVALQGLSEVEISQLADYL 127 (144)
T ss_dssp HHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHHHHH--H--HHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhhhcccccCCCCCCCccccccCHHHHHHHHHHH--H--HHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5677888999999999952 2 378999987665432 1 1223345578899999999887766
No 8
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.50 E-value=7.2 Score=26.75 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhHcCCccC----C------CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 122 RDELKNRSRVLKKLGHINA----D------GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~----~------~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
.+...+.++-|.+.|||.. + -.+|.+|+-..+=-. =...-+.+.+|++++|+|+..+...+
T Consensus 57 ~~~vs~~v~~L~~~gli~r~~~~~D~R~~~i~lT~~G~~~~~~~~----~~~~~~~~~~~~~l~~~e~~~l~~~l 127 (137)
T d2fbha1 57 GPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIE----AIAASVRNDVLTGIDESEQALCQQVL 127 (137)
T ss_dssp HHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHHHHH----HHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccccCCCCCCCchhhhcCHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4667889999999999963 2 268999987764321 23335556689999999999887654
No 9
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.06 E-value=3.2 Score=23.90 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=24.2
Q ss_pred HHHHHHHHHhHcCCccCCCccchhhHHhhhhcCCchHHHHHHHHhC
Q 027140 124 ELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNG 169 (227)
Q Consensus 124 e~~~~~~VL~~Lgyid~~~~vt~KGrvAceI~s~~ELllTEll~~g 169 (227)
-|..-+.-|+.+||.|.+-.+. |=..+.+|==-..|+|++|
T Consensus 4 ry~~QL~qL~~MGF~d~~~Ni~-----AL~~t~GdV~~Aie~Ll~g 44 (44)
T d2bwba1 4 RYEHQLRQLNDMGFFDFDRNVA-----ALRRSGGSVQGALDSLLNG 44 (44)
T ss_dssp HTHHHHHHHHHTTCCCHHHHHH-----HHHHHTTCHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCCcHHHHHH-----HHHHcCCCHHHHHHHHhCc
Confidence 4667788899999999653322 3333344433444555554
No 10
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=52.05 E-value=2.2 Score=29.81 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhHcCCccC----C------CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 121 FRDELKNRSRVLKKLGHINA----D------GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 121 l~~e~~~~~~VL~~Lgyid~----~------~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
-.+...+.++-|.+-|||.. + -.+|.||+-+.+-.. -..+-.++.+|++++++|+..++..+
T Consensus 57 ~~~~vs~~i~~L~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~----~~~~~~~~~~~~~l~~ee~~~l~~~L 128 (136)
T d2fbia1 57 LRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMS----GDMEKNYQRIQERFGEEKLAQLLELL 128 (136)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHHHH----HHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEeecCccCchhhhccCHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 35778889999999999953 2 378999998776442 23345566688889999999887654
No 11
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=52.00 E-value=11 Score=25.69 Aligned_cols=61 Identities=10% Similarity=-0.055 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhHcCCccC-----C-----CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 122 RDELKNRSRVLKKLGHINA-----D-----GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~-----~-----~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
.+...+.++-|.+.|||.. | -.+|.+|+-..+-.. -.-+-....+|.+++++|+..+.+.+
T Consensus 59 ~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~G~~~~~~~~----~~~~~~~~~~~~~l~~ee~~~~~~~L 129 (135)
T d3broa1 59 SSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETIIL----SYMDSDQSQMTSGLNKEEVVFLEKIL 129 (135)
T ss_dssp HHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTHHHHH----HHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4566788999999999942 2 378999997665432 22234455678889999999886654
No 12
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=51.23 E-value=2.3 Score=29.81 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhHcCCccC----C------CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 121 FRDELKNRSRVLKKLGHINA----D------GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 121 l~~e~~~~~~VL~~Lgyid~----~------~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
-.+..-++++-|.+.|||.. + -.+|.+|+-+.+--. -..+-+...+|++++|+|+..+.+.+
T Consensus 57 ~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~~----~~~~~~~~~~~~~l~~~e~~~l~~~l 128 (139)
T d2a61a1 57 AKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVI----ERRENFIEKITSDLGKEKSSKILDYL 128 (139)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHHHH----HHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CcccchHHHHHHHhcCeeeeeeccCCCCeEEEEECHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 35778899999999999963 1 388999997765431 23334566778889998888876654
No 13
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=49.13 E-value=11 Score=25.90 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhHcCCcc----CC------CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 121 FRDELKNRSRVLKKLGHIN----AD------GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 121 l~~e~~~~~~VL~~Lgyid----~~------~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
-.+...+.++-|.+.|||. ++ -.+|.+|+-..+-.. + .-.=.+..+|++++++|+..+...+
T Consensus 59 ~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~--~--~~~~~~~~~~~~~~~~e~~~~~~~l 130 (140)
T d2etha1 59 TKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFGEIL--S--NFESLLKSVLEKFSEEDFKVVSEGF 130 (140)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHHHHHH--H--HHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCeeeeecccccchhhhhcCHHHHHHHHHHH--H--HHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3577889999999999996 22 378999987665442 1 1133345577889999988876654
No 14
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}
Probab=48.07 E-value=3.2 Score=24.48 Aligned_cols=16 Identities=13% Similarity=0.140 Sum_probs=14.0
Q ss_pred CCCHHHHHHHhhhccc
Q 027140 173 DLDHHQVAALASCFIP 188 (227)
Q Consensus 173 ~L~p~eiaAllS~~V~ 188 (227)
+.+|.+++|+|.++-.
T Consensus 29 ~~~~~qiaafL~al~~ 44 (52)
T d2elca1 29 EVSPVRAAGLLVALSL 44 (52)
T ss_dssp CSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 6899999999999865
No 15
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=46.34 E-value=1.5 Score=27.51 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=22.3
Q ss_pred CCCHHHHHHHhhhcccccCCCCCcCCcHHHHHHHHHHHHHH
Q 027140 173 DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 213 (227)
Q Consensus 173 ~L~p~eiaAllS~~V~~~r~~~~~~l~~~l~~~~~~l~~ia 213 (227)
+++|.+++|+|.++-...-+ ++++......+++-+
T Consensus 32 ~~s~~qiaafL~al~~kGet------~~Ei~g~~~amr~~~ 66 (70)
T d1o17a1 32 EVPEILVSAILVALRMKGES------KNEIVGFARAMRELA 66 (70)
T ss_dssp CSCHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHhc
Confidence 57889999999888764322 244555555555543
No 16
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=44.52 E-value=5.8 Score=24.44 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=14.6
Q ss_pred HHhCCCC-CCCHHHHHHHhhhccc
Q 027140 166 MFNGTFN-DLDHHQVAALASCFIP 188 (227)
Q Consensus 166 l~~g~f~-~L~p~eiaAllS~~V~ 188 (227)
+++++++ ++++.|++|+|.++-.
T Consensus 23 ~~~~i~~g~~~d~qiaafL~al~~ 46 (69)
T d1khda1 23 LFAAIVRGELEDSQLAAALISMKM 46 (69)
T ss_dssp HHHHHTTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3344444 3677777777777765
No 17
>d2c0ga1 a.71.1.1 (A:1146-1251) Windbeutel, C-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=44.20 E-value=14 Score=25.06 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhHcC
Q 027140 101 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 136 (227)
Q Consensus 101 ~l~~~~~~l~~~l~~~~~l~l~~e~~~~~~VL~~Lg 136 (227)
-+..|+++|.+-+.+.-+..=.++|..+++||+.|.
T Consensus 63 fv~~E~~RL~~ll~g~~s~~K~del~~r~NIL~~F~ 98 (106)
T d2c0ga1 63 FLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFR 98 (106)
T ss_dssp HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356788888888876444556699999999999885
No 18
>d1g7da_ a.71.1.1 (A:) Endoplasmic reticulum protein ERP29, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=41.17 E-value=13 Score=25.10 Aligned_cols=35 Identities=11% Similarity=0.255 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhHcC
Q 027140 102 VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 136 (227)
Q Consensus 102 l~~~~~~l~~~l~~~~~l~l~~e~~~~~~VL~~Lg 136 (227)
+..|+++|.+-+++.-+..=.++|..|++||+.|-
T Consensus 63 ~~~E~~RL~~il~g~vs~~K~del~~r~NIL~sF~ 97 (106)
T d1g7da_ 63 PASELARISKLIENKMSEGKKEELQRSLNILTAFR 97 (106)
T ss_dssp HHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 56778888888866444455799999999999983
No 19
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=39.75 E-value=26 Score=23.70 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhHcCCccC-----C-----CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhh
Q 027140 121 FRDELKNRSRVLKKLGHINA-----D-----GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 185 (227)
Q Consensus 121 l~~e~~~~~~VL~~Lgyid~-----~-----~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~ 185 (227)
-.+...+.++-|.+.|||.. | -.+|.+|+-+++--. + +..+. .. +.+++++|+..+...
T Consensus 60 ~~~~vsr~i~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~~~~~~--~-~~~~~-~~--~~~~~~ee~~~l~~~ 128 (137)
T d1z91a1 60 DSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAV--D-IPGTI-LG--LSKQSGEDLKQLKSA 128 (137)
T ss_dssp CHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGGGGTT--T-HHHHH-HH--HTCCCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhccceEEeecCCCCCeEEEEECHHHHHHHHHHH--H-HHHHH-HH--HhCCCHHHHHHHHHH
Confidence 35777889999999999952 2 278999998776432 2 22222 21 456777777766544
No 20
>d1ttea1 a.5.2.1 (A:161-215) Ubiquitin-protein ligase ubc1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.34 E-value=7.6 Score=23.27 Aligned_cols=14 Identities=29% Similarity=0.441 Sum_probs=12.1
Q ss_pred HHHHHHHhHcCCcc
Q 027140 126 KNRSRVLKKLGHIN 139 (227)
Q Consensus 126 ~~~~~VL~~Lgyid 139 (227)
.+.+.||++|||=.
T Consensus 24 dKvI~VLrrlgik~ 37 (55)
T d1ttea1 24 DKIVEVLRRLGVKS 37 (55)
T ss_dssp HHHHHHHHHSCCSS
T ss_pred hhHHHHHHHhCcCC
Confidence 46799999999985
No 21
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=31.00 E-value=6.1 Score=24.44 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=12.8
Q ss_pred CCCHHHHHHHhhhcccc
Q 027140 173 DLDHHQVAALASCFIPV 189 (227)
Q Consensus 173 ~L~p~eiaAllS~~V~~ 189 (227)
.++|.|++|+|.++-..
T Consensus 33 ~~~d~qi~afL~al~~k 49 (70)
T d2tpta1 33 TISEGQIAALAMTIFFH 49 (70)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHc
Confidence 37888888888887653
No 22
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.32 E-value=14 Score=21.67 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhHcCCccCCCccchhhHHhhhhcCCchHHHHHHHHhC
Q 027140 123 DELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNG 169 (227)
Q Consensus 123 ~e~~~~~~VL~~Lgyid~~~~vt~KGrvAceI~s~~ELllTEll~~g 169 (227)
.-|..-+.-|+.+||.|.+-.+. |=..+.+|==-..|.|++|
T Consensus 6 ~ry~~QL~qL~~MGF~d~~~Ni~-----AL~~t~GdV~~Aie~Ll~~ 47 (50)
T d2dnaa1 6 VRFSKEMECLQAMGFVNYNANLQ-----ALIATDGDTNAAIYKLKSS 47 (50)
T ss_dssp HHTHHHHHHHHHHTCCCHHHHHH-----HHHHTTSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHH-----HHHHcCCCHHHHHHHHHhc
Confidence 45677788899999999653332 3333444433444455443
No 23
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=28.30 E-value=12 Score=27.04 Aligned_cols=60 Identities=17% Similarity=0.035 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhHcCCccCC----------CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhhhc
Q 027140 123 DELKNRSRVLKKLGHINAD----------GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 186 (227)
Q Consensus 123 ~e~~~~~~VL~~Lgyid~~----------~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS~~ 186 (227)
+..-+.++-|.+.|||... -.+|.||+-+++--. -..+-..+.+|.+++++|...+...+
T Consensus 94 ~tvsr~l~~Le~~GlV~r~~~~~DrR~~~i~LT~~G~~l~~~~~----~~~~~~~~~~~~~l~~~E~~~l~~~L 163 (172)
T d2fbka1 94 PSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALVTHLL----PAHLATTQRVLAPLSAQEQRTLEELA 163 (172)
T ss_dssp GGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHHHHHH----HHHHHHHHHHHTTSCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCeeeeccccchhhHHhhcCHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4455778889999999642 378999987765321 12223335567788888887765443
No 24
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=27.96 E-value=10 Score=23.30 Aligned_cols=16 Identities=31% Similarity=0.310 Sum_probs=11.9
Q ss_pred CCCHHHHHHHhhhccc
Q 027140 173 DLDHHQVAALASCFIP 188 (227)
Q Consensus 173 ~L~p~eiaAllS~~V~ 188 (227)
.++|.+++|+|.++-.
T Consensus 32 ~~s~~qi~afL~al~~ 47 (70)
T d1brwa1 32 DIPDYQMSALAMAIYF 47 (70)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4677888888777765
No 25
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=26.95 E-value=16 Score=23.90 Aligned_cols=36 Identities=14% Similarity=0.005 Sum_probs=28.3
Q ss_pred hhhHHHHHHHHHHHHHhHcCCccC---CCccchhhHHhhh
Q 027140 117 QIQKFRDELKNRSRVLKKLGHINA---DGVVQLKGRAACL 153 (227)
Q Consensus 117 ~~l~l~~e~~~~~~VL~~Lgyid~---~~~vt~KGrvAce 153 (227)
.|+. +.-+...+.-|...|+|.. ...+|.||+-.-+
T Consensus 28 aNLs-~~~~~kyl~~L~~~GLI~~~~~~Y~iT~kG~~~L~ 66 (90)
T d1r7ja_ 28 ANLS-YALTGRYIKMLMDLEIIRQEGKQYMLTKKGEELLE 66 (90)
T ss_dssp HTCC-HHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHHH
T ss_pred cCCC-HHHHHHHHHHHHHCCCeeecCCEEEECccHHHHHH
Confidence 4543 6889999999999999954 2589999986644
No 26
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.63 E-value=16 Score=23.68 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhHcCCccCC-----Cccchhh
Q 027140 122 RDELKNRSRVLKKLGHINAD-----GVVQLKG 148 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~~-----~~vt~KG 148 (227)
.-.-.+.+.-|++.|||... .++|.||
T Consensus 39 ~aTIRn~m~~LE~~G~l~~~h~s~GriPT~~g 70 (87)
T d1stza1 39 SATIRNDMKKLEYLGYIYQPHTSAGRIPTDKG 70 (87)
T ss_dssp HHHHHHHHHHHHHTTSEECCSSCSCBEECHHH
T ss_pred HHHHHHHHHHHHHCCcccCCCCCCCCcccHHH
Confidence 35667888999999999753 4778888
No 27
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=24.70 E-value=63 Score=21.50 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhHcCCccC-----C-----CccchhhHHhhhhcCCchHHHHHHHHhCCCCCCCHHHHHHHhh
Q 027140 122 RDELKNRSRVLKKLGHINA-----D-----GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 184 (227)
Q Consensus 122 ~~e~~~~~~VL~~Lgyid~-----~-----~~vt~KGrvAceI~s~~ELllTEll~~g~f~~L~p~eiaAllS 184 (227)
.+...+.++-|.+.|||.. | -.+|.||+-..+--.. ...++ .+ +.+++++|+..+..
T Consensus 62 ~~~~s~~l~~L~~~Gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~~---~~~~~-~~--~~~l~~~e~~~l~~ 128 (136)
T d2bv6a1 62 TGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSN---ASDKV-AS--ASSLSQDEVKELNR 128 (136)
T ss_dssp TTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHHHHTT---HHHHH-HH--HTTCCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHCCCEEEeecCCcccchhhccCHHHHHHHHHHHH---HHHHH-HH--HcCCCHHHHHHHHH
Confidence 3567788999999999952 2 2789999987664332 22232 22 23788888877643
No 28
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.96 E-value=15 Score=20.55 Aligned_cols=17 Identities=18% Similarity=0.479 Sum_probs=14.3
Q ss_pred HHHHHHHHhHcCCccCC
Q 027140 125 LKNRSRVLKKLGHINAD 141 (227)
Q Consensus 125 ~~~~~~VL~~Lgyid~~ 141 (227)
|..-+.-|+.+||.|.+
T Consensus 2 y~~QL~~L~~MGF~d~~ 18 (41)
T d2daha1 2 FQVQLEQLRSMGFLNRE 18 (41)
T ss_dssp SHHHHHHHHHHTCCCHH
T ss_pred hHHHHHHHHHcCCCCHH
Confidence 66778899999999964
No 29
>d1mzga_ d.224.1.1 (A:) SufE (YhnA) {Escherichia coli [TaxId: 562]}
Probab=22.94 E-value=13 Score=26.51 Aligned_cols=50 Identities=6% Similarity=0.136 Sum_probs=29.5
Q ss_pred HHhCCCCCCCHHHHHHH-hhhcccccCCCCCcCCcHH----HHHHHHHHHHHHHHHH
Q 027140 166 MFNGTFNDLDHHQVAAL-ASCFIPVDKSSEQINLRME----LAKPLQQLQESARKIA 217 (227)
Q Consensus 166 l~~g~f~~L~p~eiaAl-lS~~V~~~r~~~~~~l~~~----l~~~~~~l~~ia~~i~ 217 (227)
|+-..|++.+|+||.++ ...|.-+- .-...|||. +..-+++|++.|.+++
T Consensus 82 il~~~~~g~t~~eI~~~d~~~~~~~l--gL~~~Ls~sR~NGl~~mi~~ik~~A~~~~ 136 (144)
T d1mzga_ 82 VVFILYDQMTPQDIVNFDVRPWFEKM--ALTQHLTPSRSQGLEAMIRAIRAKAAALS 136 (144)
T ss_dssp HHHHHTTTCCHHHHHHCCCHHHHHHH--THHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHhcChHHHHHHc--CCccccCccHHHHHHHHHHHHHHHHHHHH
Confidence 44557899999999987 55554321 112356665 4444555555555543
No 30
>d1rwsa_ d.15.3.2 (A:) Hypothetical protein PF1061 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=20.96 E-value=11 Score=23.43 Aligned_cols=27 Identities=11% Similarity=0.337 Sum_probs=22.4
Q ss_pred HHHHHHhHcCCccCCCccchhhHHhhh
Q 027140 127 NRSRVLKKLGHINADGVVQLKGRAACL 153 (227)
Q Consensus 127 ~~~~VL~~Lgyid~~~~vt~KGrvAce 153 (227)
....||+++|+..+...+-.-|+++.|
T Consensus 23 ~v~dvL~~~gl~~e~~vv~~nG~vv~e 49 (68)
T d1rwsa_ 23 KVRDILRAVGFNTESAIAKVNGKVVLE 49 (68)
T ss_dssp CHHHHHHTTTCSSCSSCEEETTEEECS
T ss_pred CHHHHHHHcCCCcceEEEEECCEEecC
Confidence 356899999999988888888988864
No 31
>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.69 E-value=9.7 Score=23.14 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=17.9
Q ss_pred hHcCCccC-CCccchhhHHhhhhc
Q 027140 133 KKLGHINA-DGVVQLKGRAACLID 155 (227)
Q Consensus 133 ~~Lgyid~-~~~vt~KGrvAceI~ 155 (227)
+-+||--. +|.+..+|++.|.|=
T Consensus 5 ~YFGF~~~~~g~i~~~~~i~C~lC 28 (60)
T d2ct5a1 5 KYFGFDTNAEGCILQWKKIYCRIC 28 (60)
T ss_dssp SSSCCCCCSSSCGGGSSCCEETTT
T ss_pred hhcCccCCCCCceeeccchHHHHH
Confidence 45788754 578999999999873
No 32
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=20.33 E-value=32 Score=22.94 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=26.8
Q ss_pred CCCCCCHHHHHHHhhhcccccCCCCCcCCcHHHHHHHHHHHHHHHHHH
Q 027140 170 TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 217 (227)
Q Consensus 170 ~f~~L~p~eiaAllS~~V~~~r~~~~~~l~~~l~~~~~~l~~ia~~i~ 217 (227)
.|.|++..|||..+.+=.- .....+..+...+++.-.++.
T Consensus 29 y~~~ls~~EIA~~lgiS~~--------aV~~~l~RA~~~L~~~e~kL~ 68 (106)
T d1s7oa_ 29 YADDYSLAEIADEFGVSRQ--------AVYDNIKRTEKILETYEMKLH 68 (106)
T ss_dssp HHTCCCHHHHHHHHTCCHH--------HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHHHHHHCcCHH--------HHHHHHHHHHHHHHHHHHHHC
Confidence 5789999999999876432 334456667777766554443
No 33
>d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.32 E-value=25 Score=23.08 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=25.1
Q ss_pred hHHHHHHHHhCCCCCCCHHHHHHHhhhccccc
Q 027140 159 ELLVTELMFNGTFNDLDHHQVAALASCFIPVD 190 (227)
Q Consensus 159 ELllTEll~~g~f~~L~p~eiaAllS~~V~~~ 190 (227)
+.+...|.--.+|.+|+++.+..|++++.++.
T Consensus 6 ~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~ 37 (124)
T d1o7fa3 6 EIIYDELLHIKALSHLSTTVKRELAGVLIFES 37 (124)
T ss_dssp HHHHHHHTTCGGGTTSCHHHHHHHHHHCEEEE
T ss_pred HHHHHHHhCCHhhhcCCHHHHHHHHhhCeEEE
Confidence 34555566667899999999999999998753
Done!