Query 027143
Match_columns 227
No_of_seqs 232 out of 1733
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 08:47:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ej7_A HCG3 gene; HCG3 protein 99.8 5.6E-19 1.9E-23 129.3 7.5 64 158-225 7-70 (82)
2 2dmx_A DNAJ homolog subfamily 99.8 9.6E-19 3.3E-23 130.9 6.4 64 158-225 7-70 (92)
3 2yua_A Williams-beuren syndrom 99.7 3.1E-18 1E-22 130.1 8.4 65 156-225 13-77 (99)
4 2dn9_A DNAJ homolog subfamily 99.7 2E-18 6.9E-23 125.5 6.8 62 159-225 6-67 (79)
5 2lgw_A DNAJ homolog subfamily 99.7 1.9E-18 6.5E-23 131.7 6.7 63 159-225 1-63 (99)
6 2ys8_A RAB-related GTP-binding 99.7 2.2E-18 7.5E-23 129.0 6.8 62 159-226 26-87 (90)
7 1iur_A KIAA0730 protein; DNAJ 99.7 2.7E-18 9.4E-23 128.5 7.2 65 156-224 12-76 (88)
8 2ctr_A DNAJ homolog subfamily 99.7 5.2E-18 1.8E-22 126.1 7.4 61 159-225 6-66 (88)
9 2ctp_A DNAJ homolog subfamily 99.7 4.6E-18 1.6E-22 123.4 6.8 62 158-225 5-66 (78)
10 1wjz_A 1700030A21RIK protein; 99.7 5.7E-18 2E-22 126.8 6.5 65 157-225 13-82 (94)
11 2och_A Hypothetical protein DN 99.7 6.2E-18 2.1E-22 121.4 6.2 61 157-225 5-65 (73)
12 2ctw_A DNAJ homolog subfamily 99.7 1.4E-17 4.8E-22 128.7 8.4 63 158-225 15-77 (109)
13 1hdj_A Human HSP40, HDJ-1; mol 99.7 8.7E-18 3E-22 121.7 6.6 60 160-225 3-62 (77)
14 2ctq_A DNAJ homolog subfamily 99.7 8.9E-18 3.1E-22 130.3 6.3 63 158-225 18-80 (112)
15 2cug_A Mkiaa0962 protein; DNAJ 99.7 2.6E-17 8.9E-22 122.3 8.0 62 158-225 15-76 (88)
16 2o37_A Protein SIS1; HSP40, J- 99.7 1.9E-17 6.5E-22 124.1 6.6 61 157-225 5-65 (92)
17 1faf_A Large T antigen; J doma 99.7 2.9E-17 9.8E-22 120.3 4.8 59 159-226 10-70 (79)
18 1bq0_A DNAJ, HSP40; chaperone, 99.7 1.3E-17 4.4E-22 127.4 2.2 61 160-225 3-63 (103)
19 2guz_A Mitochondrial import in 99.7 1.1E-16 3.8E-21 114.8 6.0 60 157-225 11-71 (71)
20 2l6l_A DNAJ homolog subfamily 99.7 1.9E-16 6.6E-21 128.8 7.9 64 158-225 8-76 (155)
21 3apq_A DNAJ homolog subfamily 99.6 1.5E-16 5.3E-21 132.8 5.6 61 160-225 2-62 (210)
22 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 2.3E-16 7.9E-21 121.4 5.9 65 158-225 13-79 (109)
23 1gh6_A Large T antigen; tumor 99.6 6E-17 2.1E-21 126.6 1.4 59 159-226 7-67 (114)
24 2qwo_B Putative tyrosine-prote 99.6 8.9E-17 3E-21 121.3 2.1 57 160-220 33-91 (92)
25 3hho_A CO-chaperone protein HS 99.6 8.1E-16 2.8E-20 128.0 5.7 65 159-225 3-71 (174)
26 1fpo_A HSC20, chaperone protei 99.6 1.2E-15 4.1E-20 126.7 6.0 63 161-225 2-68 (171)
27 3bvo_A CO-chaperone protein HS 99.6 2.1E-15 7.2E-20 128.9 7.5 66 158-225 41-110 (207)
28 3ag7_A Putative uncharacterize 99.6 3E-16 1E-20 121.1 1.8 58 160-222 41-104 (106)
29 1n4c_A Auxilin; four helix bun 99.6 5.6E-16 1.9E-20 130.1 3.3 62 160-225 117-180 (182)
30 3lz8_A Putative chaperone DNAJ 99.5 4.1E-16 1.4E-20 141.6 0.0 63 157-225 25-87 (329)
31 2pf4_E Small T antigen; PP2A, 99.5 2.1E-15 7.1E-20 125.9 0.7 58 159-225 10-69 (174)
32 3uo3_A J-type CO-chaperone JAC 99.5 8.5E-15 2.9E-19 122.7 2.1 60 158-225 9-75 (181)
33 3apo_A DNAJ homolog subfamily 99.4 4.7E-14 1.6E-18 138.3 0.4 64 157-225 18-81 (780)
34 2guz_B Mitochondrial import in 99.0 6.5E-10 2.2E-14 78.6 5.8 54 159-221 3-59 (65)
35 2y4t_A DNAJ homolog subfamily 98.8 2.4E-09 8.2E-14 94.5 5.2 61 161-225 383-445 (450)
36 2pzi_A Probable serine/threoni 79.4 0.84 2.9E-05 43.7 2.4 44 161-217 630-675 (681)
37 1q90_G Cytochrome B6F complex 66.3 1.9 6.5E-05 26.6 0.9 20 32-51 8-27 (37)
38 1vf5_G Protein PET G; photosyn 60.6 2.7 9.2E-05 25.9 0.8 19 33-51 9-27 (37)
39 3mp7_B Preprotein translocase 30.7 34 0.0012 23.1 2.6 32 15-46 23-55 (61)
40 2khf_A PLNJ; anti-microbial, b 30.6 16 0.00054 20.3 0.7 16 70-85 2-17 (26)
41 3eff_K Voltage-gated potassium 30.3 1.3E+02 0.0044 22.5 6.3 16 34-49 73-88 (139)
42 1iij_A ERBB-2 receptor protein 29.8 30 0.001 20.9 2.0 26 25-50 5-30 (35)
43 2ww9_B Protein transport prote 25.2 24 0.00082 25.3 1.1 25 22-46 48-72 (80)
44 2pjv_A Envelope glycoprotein; 22.4 25 0.00085 20.8 0.6 19 29-47 3-21 (31)
45 2wwb_B SEC61gamma, protein tra 22.4 40 0.0014 23.3 1.7 32 15-46 26-58 (68)
46 3bo0_B Preprotein translocase 21.5 69 0.0024 21.2 2.8 32 14-45 22-56 (65)
47 2jwa_A Receptor tyrosine-prote 20.3 65 0.0022 20.4 2.3 25 25-49 9-33 (44)
No 1
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=5.6e-19 Score=129.29 Aligned_cols=64 Identities=38% Similarity=0.606 Sum_probs=59.6
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.+.+||+||||++++ +.++||++|++|+++||||+++...+.+++.|++|++||++|+||.+|.
T Consensus 7 ~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQA----SSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70 (82)
T ss_dssp SSCCHHHHTTCCTTC----CHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHH
T ss_pred CCcCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 357999999999999 9999999999999999999999876678999999999999999999874
No 2
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=9.6e-19 Score=130.90 Aligned_cols=64 Identities=39% Similarity=0.630 Sum_probs=59.4
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.+.+||+||||++++ +.++||++|++|+++||||+++...+.++++|++|++||++|+||.+|.
T Consensus 7 ~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (92)
T 2dmx_A 7 GMANYYEVLGVQASA----SPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS 70 (92)
T ss_dssp CCCCHHHHHTCCTTC----CTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCcCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 457999999999999 9999999999999999999998876678999999999999999998874
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=3.1e-18 Score=130.09 Aligned_cols=65 Identities=31% Similarity=0.527 Sum_probs=58.5
Q ss_pred CCCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 156 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 156 ~~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.....+||+||||++++ +.++||++||+|+++||||+++++.. ++++|++|++||+||+||.+|.
T Consensus 13 ~~~~~~~Y~vLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~-a~~~f~~i~~Ay~~L~d~~~R~ 77 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTA----TQAQIKAAYYRQCFLYHPDRNSGSAE-AAERFTRISQAYVVLGSATLRR 77 (99)
T ss_dssp SSCSSHHHHHHTCCTTC----CHHHHHHHHHHHHHHSCTTTCSSCSH-HHHHHHHHHHHHHHTTSHHHHH
T ss_pred CCCccCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCHH-HHHHHHHHHHHHHHHCCHHHHH
Confidence 34457999999999999 99999999999999999999986544 7899999999999999998874
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=125.48 Aligned_cols=62 Identities=34% Similarity=0.593 Sum_probs=56.9
Q ss_pred chhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 159 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
..+||+||||++++ +.++||++|++|+++||||++++... +++.|++|++||++|+||.+|.
T Consensus 6 ~~~~y~iLgv~~~a----~~~~Ik~ayr~l~~~~HPD~~~~~~~-a~~~f~~i~~Ay~~L~d~~~R~ 67 (79)
T 2dn9_A 6 SGDYYQILGVPRNA----SQKEIKKAYYQLAKKYHPDTNKDDPK-AKEKFSQLAEAYEVLSDEVKRK 67 (79)
T ss_dssp CSCHHHHHTCCTTC----CHHHHHHHHHHHHHHTCTTTCSSCTT-HHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCHH-HHHHHHHHHHHHHHHCCHHHHH
Confidence 46999999999999 99999999999999999999986543 7899999999999999999874
No 5
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.74 E-value=1.9e-18 Score=131.66 Aligned_cols=63 Identities=41% Similarity=0.665 Sum_probs=58.8
Q ss_pred chhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 159 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
|.|||+||||++++ +.++||++|++|+++||||++++..+.+++.|++|++||++|+||.+|.
T Consensus 1 M~d~Y~iLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~ 63 (99)
T 2lgw_A 1 MASYYEILDVPRSA----SADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63 (99)
T ss_dssp CCCHHHHSSSCTTS----CHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 46899999999999 9999999999999999999998876678999999999999999998874
No 6
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2.2e-18 Score=128.97 Aligned_cols=62 Identities=24% Similarity=0.353 Sum_probs=56.9
Q ss_pred chhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCcccccC
Q 027143 159 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 226 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~~ 226 (227)
..+||+||||++++ +.++||++||+|+++||||++++. .+.++|++|++||++|+||.+|..
T Consensus 26 ~~~~y~iLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGA----SRDEVNKAYRKLAVLLHPDKCVAP--GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTC----CHHHHHHHHHHHHHHHCTTTCCCT--THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCcccccC
Confidence 36999999999999 999999999999999999999763 378899999999999999998865
No 7
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=2.7e-18 Score=128.46 Aligned_cols=65 Identities=23% Similarity=0.242 Sum_probs=59.0
Q ss_pred CCCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCcccc
Q 027143 156 SYSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKD 224 (227)
Q Consensus 156 ~~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR 224 (227)
.....++|+||||+.++ |.++||+|||+|+++||||+++++.+.|+++|++|++||++|+|...|
T Consensus 12 ~~~~~~~y~vLgv~~~a----s~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKL----PESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SSCHHHHHHHHHHTTSS----CSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHhCCCCCC----CHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 34567999999999999 999999999999999999999988777899999999999999996644
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=5.2e-18 Score=126.14 Aligned_cols=61 Identities=34% Similarity=0.632 Sum_probs=56.7
Q ss_pred chhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 159 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
..+||+||||++++ +.++||++||+|+++||||+++. +.+.+.|++|++||++|+||.+|.
T Consensus 6 ~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~ 66 (88)
T 2ctr_A 6 SGSYYDILGVPKSA----SERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRK 66 (88)
T ss_dssp CCSHHHHHTCCTTC----CHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHH
Confidence 46999999999999 99999999999999999999985 458999999999999999998874
No 9
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.6e-18 Score=123.43 Aligned_cols=62 Identities=31% Similarity=0.562 Sum_probs=57.0
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...+||+||||++++ +.++||++|++|+++||||+++. +.+.+.|++|++||++|+||.+|.
T Consensus 5 ~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~ 66 (78)
T 2ctp_A 5 SSGDYYEILGVSRGA----SDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRK 66 (78)
T ss_dssp CSCCHHHHHTCCTTC----CHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHH
Confidence 346999999999999 99999999999999999999986 447899999999999999998874
No 10
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.72 E-value=5.7e-18 Score=126.76 Aligned_cols=65 Identities=22% Similarity=0.381 Sum_probs=58.3
Q ss_pred CCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHHHhcCccccc
Q 027143 157 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN-----KEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 157 ~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~-----~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
....+||+||||++++ +.++||++|++|+++||||+++.+ .+.+++.|++|++||++|+||.+|.
T Consensus 13 ~~~~~~y~iLgv~~~a----s~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 82 (94)
T 1wjz_A 13 TLKKDWYSILGADPSA----NMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKK 82 (94)
T ss_dssp SSCSCHHHHTTCCTTC----CHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHH
T ss_pred CCCCChHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 3457999999999999 999999999999999999998742 3558899999999999999999874
No 11
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.72 E-value=6.2e-18 Score=121.36 Aligned_cols=61 Identities=33% Similarity=0.590 Sum_probs=55.3
Q ss_pred CCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 157 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 157 ~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
....+||+||||++++ +.++||++|++|++++|||++++. .+.|++|++||++|+||.+|.
T Consensus 5 ~~~~~~y~iLgl~~~a----~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~ 65 (73)
T 2och_A 5 VKETGYYDVLGVKPDA----SDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQ 65 (73)
T ss_dssp -CCCCHHHHHTCCTTC----CHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHH
T ss_pred cCCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHH
Confidence 3457999999999999 999999999999999999999873 578999999999999999874
No 12
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=1.4e-17 Score=128.67 Aligned_cols=63 Identities=37% Similarity=0.528 Sum_probs=57.7
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...++|+||||++++ +.++||++|++|+++||||+++++. .+.++|++|++||++|+||.+|.
T Consensus 15 ~~~~~Y~vLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~d~~~R~ 77 (109)
T 2ctw_A 15 SGESLYHVLGLDKNA----TSDDIKKSYRKLALKYHPDKNPDNP-EAADKFKEINNAHAILTDATKRN 77 (109)
T ss_dssp CSCCHHHHHTCCTTC----CHHHHHHHHHHHHHHSCTTTSTTCH-HHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCcH-HHHHHHHHHHHHHHHHcCHHHHH
Confidence 346999999999999 9999999999999999999998754 48899999999999999999874
No 13
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=8.7e-18 Score=121.65 Aligned_cols=60 Identities=40% Similarity=0.678 Sum_probs=55.4
Q ss_pred hhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 160 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 160 ~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.+||+||||++++ |.++||++|++|++++|||++++. .+.+.|+.|++||++|+||.+|.
T Consensus 3 ~~~y~iLgv~~~a----s~~~Ik~ayr~l~~~~HPD~~~~~--~~~~~f~~i~~Ay~~L~d~~~R~ 62 (77)
T 1hdj_A 3 KDYYQTLGLARGA----SDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKRE 62 (77)
T ss_dssp CCSHHHHTCCTTC----CHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCHHHHH
Confidence 4899999999999 999999999999999999999863 37899999999999999998874
No 14
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=8.9e-18 Score=130.27 Aligned_cols=63 Identities=27% Similarity=0.469 Sum_probs=57.6
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...+||+||||++++ +.++||++||+|+++||||+++++.. ++++|++|++||++|+||.+|.
T Consensus 18 ~~~d~Y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~-a~~~f~~i~~Ay~vL~d~~~R~ 80 (112)
T 2ctq_A 18 DTEDYYTLLGCDELS----SVEQILAEFKVRALECHPDKHPENPK-AVETFQKLQKAKEILTNEESRA 80 (112)
T ss_dssp CCCCHHHHTTCCTTS----CHHHHHHHHHHHHHTTCTTTCTTCST-HHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCcHH-HHHHHHHHHHHHHHHCCHHHHH
Confidence 347999999999999 99999999999999999999986543 8999999999999999999874
No 15
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=2.6e-17 Score=122.32 Aligned_cols=62 Identities=35% Similarity=0.614 Sum_probs=56.6
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...+||+||||++++ +.++||++||+|+++||||++++. .+++.|++|++||++|+||.+|.
T Consensus 15 ~~~d~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~ 76 (88)
T 2cug_A 15 LDFDPYRVLGVSRTA----SQADIKKAYKKLAREWHPDKNKDP--GAEDRFIQISKAYEILSNEEKRT 76 (88)
T ss_dssp SSSCHHHHHTCCTTC----CHHHHHHHHHHHHHHSCTTTCCST--THHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCh--hHHHHHHHHHHHHHHHCCHHHHH
Confidence 346999999999999 999999999999999999999863 37899999999999999998874
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.9e-17 Score=124.11 Aligned_cols=61 Identities=30% Similarity=0.576 Sum_probs=55.5
Q ss_pred CCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 157 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 157 ~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
....++|+||||++++ +.++||++|++|+++||||+++.+ .+.|++|++||++|+||.+|.
T Consensus 5 ~~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~ 65 (92)
T 2o37_A 5 VKETKLYDLLGVSPSA----NEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKRE 65 (92)
T ss_dssp CSCCHHHHHHTCCTTC----CHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHH
T ss_pred ccCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHH
Confidence 3457999999999999 999999999999999999999874 469999999999999998874
No 17
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.67 E-value=2.9e-17 Score=120.30 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=53.9
Q ss_pred chhhhhhhccCCC--CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCcccccC
Q 027143 159 LSHHYSVLGLDRL--RKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 226 (227)
Q Consensus 159 ~~d~Y~ILGl~~~--a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~~ 226 (227)
..++|+||||+++ + |.++||++||+|+++||||++++ .++|++|++||++|+|+.+|..
T Consensus 10 ~~~~y~iLgl~~~~~a----~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 10 KERLLELLKLPRQLWG----DFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHTCCSSSTT----CHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCCC----CHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH
Confidence 4689999999999 8 99999999999999999999875 5789999999999999987753
No 18
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.66 E-value=1.3e-17 Score=127.39 Aligned_cols=61 Identities=43% Similarity=0.758 Sum_probs=55.9
Q ss_pred hhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 160 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 160 ~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.+||+||||++++ |.++||++||+|+++||||+++++.. ++++|++|++||++|+||.+|.
T Consensus 3 ~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~-a~~~f~~i~~Ay~~L~d~~~R~ 63 (103)
T 1bq0_A 3 QDYYEILGVSKTA----EEREIRKAYKRLAMKYHPDRNQGDKE-AEAKFKEIKEAYEVLTDSQKRA 63 (103)
T ss_dssp CCSTTTTSSCSSC----CHHHHHHHHHHHHTTTCTTTCTTTCT-HHHHHHHHTTTTTSTTCSHHHH
T ss_pred CCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCcCCCCCcHH-HHHHHHHHHHHHHHHCCHHHHH
Confidence 5899999999999 99999999999999999999986433 7899999999999999998874
No 19
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.1e-16 Score=114.76 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=53.3
Q ss_pred CCchhhhhhhccCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 157 YSLSHHYSVLGLDR-LRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 157 ~~~~d~Y~ILGl~~-~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.+..++|+||||++ ++ |.++||++||+|++++|||++++ .+.|++|++||++|+++..|.
T Consensus 11 m~~~~~y~iLgl~~~~a----~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 11 MNSKEALQILNLTENTL----TKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp CCHHHHHHHTTCCTTTC----CHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHcCCCCCCC----CHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhcC
Confidence 34579999999998 68 99999999999999999999754 469999999999999987663
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.65 E-value=1.9e-16 Score=128.81 Aligned_cols=64 Identities=22% Similarity=0.399 Sum_probs=57.6
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN-----KEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~-----~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...|||+||||++++ +.++||++||+|++++|||+++.. .+.|.+.|+.|++||++|+||.+|.
T Consensus 8 ~~~~~y~iLgv~~~a----~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~ 76 (155)
T 2l6l_A 8 PKKDWYSILGADPSA----NISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKR 76 (155)
T ss_dssp CCSHHHHHHTCCTTC----CHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHC
T ss_pred CCCChhHhcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 357999999999999 999999999999999999998754 2347899999999999999999885
No 21
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.63 E-value=1.5e-16 Score=132.83 Aligned_cols=61 Identities=33% Similarity=0.585 Sum_probs=56.5
Q ss_pred hhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 160 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 160 ~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.|||+||||++++ +.++||+|||+|+++||||+++++.+ +.++|++|++||++|+||.+|.
T Consensus 2 ~~~y~~l~~~~~a----~~~~ik~ay~~l~~~~HPD~~~~~~~-~~~~f~~i~~Ay~~L~~~~~r~ 62 (210)
T 3apq_A 2 QNFYSLLGVSKTA----SSREIRQAFKKLALKLHPDKNPNNPN-AHGDFLKINRAYEVLKDEDLRK 62 (210)
T ss_dssp CCHHHHHTCCTTC----CHHHHHHHHHHHHHHHCGGGCTTCTT-HHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCChH-HHHHHHHHHHHHHHhCCHHHHH
Confidence 5899999999999 99999999999999999999976543 7899999999999999999874
No 22
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.63 E-value=2.3e-16 Score=121.43 Aligned_cols=65 Identities=29% Similarity=0.592 Sum_probs=57.5
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG--NKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~--~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...+||+||||++++ +|.++||++||+|+++||||++++ ..+.+++.|++|++||++|+||.+|.
T Consensus 13 ~~~~~y~iLgv~~~a---~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~ 79 (109)
T 2qsa_A 13 GLENCYDVLEVNREE---FDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKT 79 (109)
T ss_dssp TTSCHHHHTTCCGGG---CCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCCCCCC---CCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 347999999999875 499999999999999999999975 23458999999999999999999874
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.62 E-value=6e-17 Score=126.58 Aligned_cols=59 Identities=29% Similarity=0.442 Sum_probs=54.2
Q ss_pred chhhhhhhccCCCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCcccccC
Q 027143 159 LSHHYSVLGLDRLRKAPYTE--AEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDMN 226 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t~--~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~~ 226 (227)
..++|+||||++++ +. ++||+|||+|++++|||++++ .++|++|++||+||+||.+|..
T Consensus 7 ~~~~Y~iLgv~~~a----s~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~ 67 (114)
T 1gh6_A 7 SLQLMDLLGLERSA----WGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAH 67 (114)
T ss_dssp HHHHHHHTTCCTTS----CSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCC
T ss_pred hhhHHHHcCCCCCC----CcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHH
Confidence 46999999999998 77 999999999999999999886 4789999999999999998864
No 24
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.61 E-value=8.9e-17 Score=121.33 Aligned_cols=57 Identities=19% Similarity=0.374 Sum_probs=51.7
Q ss_pred hhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHhcC
Q 027143 160 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK--EAAEAKFKEVMVSYEAIKQ 220 (227)
Q Consensus 160 ~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~--~~a~~~F~~I~~AYevL~d 220 (227)
.++|++|||++.+ |.++||+|||+++++|||||++++. ..|+++|++|++||+||++
T Consensus 33 ~~~y~~Lgv~~~a----s~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLV----TPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSS----SHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4689999999999 9999999999999999999998653 3488999999999999975
No 25
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.59 E-value=8.1e-16 Score=128.00 Aligned_cols=65 Identities=22% Similarity=0.335 Sum_probs=56.3
Q ss_pred chhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHHHHHHHHhcCccccc
Q 027143 159 LSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKE----AAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~----~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
..|||+||||++++ .++..+||++||+|+++||||++++..+ .|.+.|+.|++||++|+||.+|.
T Consensus 3 ~~d~Y~iLgl~~~a--~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 71 (174)
T 3hho_A 3 AMNYFELFGLPIQF--ELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRA 71 (174)
T ss_dssp -CCHHHHTTCCSSS--CCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 36899999999987 3349999999999999999999976532 37789999999999999999875
No 26
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.58 E-value=1.2e-15 Score=126.69 Aligned_cols=63 Identities=13% Similarity=0.286 Sum_probs=56.2
Q ss_pred hhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHHHhcCccccc
Q 027143 161 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK----EAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 161 d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~----~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
|||+||||++++ .+|..+||++||+|+++||||++++.. ..|.++|+.|++||+||+||.+|.
T Consensus 2 d~y~lLgl~~~a--~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 68 (171)
T 1fpo_A 2 DYFTLFGLPARY--QLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA 68 (171)
T ss_dssp HHHHHTTCCSSS--CCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CHHHHCCCCCCC--CCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 799999999976 669999999999999999999997653 246789999999999999999884
No 27
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.58 E-value=2.1e-15 Score=128.87 Aligned_cols=66 Identities=15% Similarity=0.186 Sum_probs=56.9
Q ss_pred CchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGN----KEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~----~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
...|||+||||++++ .+|..+||++||+|+++||||++++. +..|.++|+.|++||+||+||.+|.
T Consensus 41 ~~~d~y~lLgv~~~~--~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSF--RVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp TTCCHHHHTTSCSCS--CCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 346999999999863 23999999999999999999999764 2347789999999999999999884
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=3e-16 Score=121.10 Aligned_cols=58 Identities=19% Similarity=0.222 Sum_probs=51.4
Q ss_pred hhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C---hHHHHHHHHHHHHHHHHhcCcc
Q 027143 160 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQG---N---KEAAEAKFKEVMVSYEAIKQER 222 (227)
Q Consensus 160 ~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~---~---~~~a~~~F~~I~~AYevL~dp~ 222 (227)
.|||+|||++. + |.++||+|||+|+++|||||+++ + ...|+++|++|++||++|+|+.
T Consensus 41 ~d~Y~vl~~~~-A----s~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-I----EGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-C----SHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-C----CHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 68999999996 8 99999999999999999999863 1 2247899999999999999985
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.57 E-value=5.6e-16 Score=130.13 Aligned_cols=62 Identities=19% Similarity=0.388 Sum_probs=56.6
Q ss_pred hhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHhcCccccc
Q 027143 160 SHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK--EAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 160 ~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~--~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.++|+||||+..+ |.++||+|||+|+++|||||+++.. ..|+++|++|++||++|+||.+|.
T Consensus 117 ~d~Y~vLgv~~~A----s~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~ 180 (182)
T 1n4c_A 117 ETKWKPVGMADLV----TPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKP 180 (182)
T ss_dssp CCCCCCCCGGGGS----SHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cchhhcCCCCCCC----CHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhh
Confidence 5899999999999 9999999999999999999997643 238899999999999999999886
No 30
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.55 E-value=4.1e-16 Score=141.57 Aligned_cols=63 Identities=37% Similarity=0.638 Sum_probs=0.0
Q ss_pred CCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 157 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 157 ~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
....|||+||||++++ |.+|||+|||+|+++||||++++. .|+++|++|++||++|+||.+|.
T Consensus 25 m~~~d~Y~vLgv~~~a----s~~eIk~aYr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~ 87 (329)
T 3lz8_A 25 MELKDYYAILGVQPTD----DLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRRA 87 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCC----CHHHHHHHHHHHHHHHCCCCCCCh--HHHHHHHHHHHHHHHhhhhhhhc
Confidence 3457999999999999 999999999999999999999863 48899999999999999999885
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.50 E-value=2.1e-15 Score=125.86 Aligned_cols=58 Identities=29% Similarity=0.432 Sum_probs=50.6
Q ss_pred chhhhhhhccCCCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 159 LSHHYSVLGLDRLRKAPYT--EAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 159 ~~d~Y~ILGl~~~a~~~~t--~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
..++|+||||++++ + .++||+|||+|++++|||++++ +++|++|++||++|+||.+|.
T Consensus 10 ~~d~Y~vLGl~~~a----s~~~~eIKkAYRkLa~~~HPDk~~~-----~e~F~~I~~AYevLsdp~kR~ 69 (174)
T 2pf4_E 10 SLQLMDLLGLERSA----WGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYA 69 (174)
T ss_dssp HHHHHHTTTCCGGG----TTCHHHHHHHHHHHGGGCSCC---C-----CTTTTHHHHHHHHHHHHHHHH
T ss_pred cccHHHHcCCCCCC----CcCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHhCCHHHHH
Confidence 36999999999998 6 6999999999999999999876 378999999999999999885
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.47 E-value=8.5e-15 Score=122.72 Aligned_cols=60 Identities=17% Similarity=0.303 Sum_probs=53.6
Q ss_pred Cchhhhhhh------ccCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 158 SLSHHYSVL------GLDR-LRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 158 ~~~d~Y~IL------Gl~~-~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
.+.|||+|| |+++ ++ |..+||++||+|+++||||++++ +.++|+.|++||++|+||.+|.
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a----~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~ 75 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTI----DQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRS 75 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCC----CHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCC----CHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHH
Confidence 457999999 4665 56 99999999999999999999987 5788999999999999999874
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.37 E-value=4.7e-14 Score=138.34 Aligned_cols=64 Identities=31% Similarity=0.521 Sum_probs=34.8
Q ss_pred CCchhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCccccc
Q 027143 157 YSLSHHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 157 ~~~~d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
....|||+||||++++ |.++||+|||+|+++||||+++++. .++++|++|++||++|+||.+|.
T Consensus 18 ~~~~~~y~~lg~~~~a----~~~~i~~ay~~l~~~~hpd~~~~~~-~~~~~f~~i~~ay~~L~~~~~r~ 81 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTA----SSREIRQAFKKLALKLHPDKNPNNP-NAHGDFLKINRAYEVLKDEDLRK 81 (780)
T ss_dssp -----CHHHHTCCTTC----CHHHHHHHHCC------------------------CTHHHHHHSHHHHH
T ss_pred CCCCCHHHHcCCCCCC----CHHHHHHHHHHHHHHHCcCCCCCCh-HHHHHHHHHHHHHHHHcChHHHH
Confidence 3457999999999999 9999999999999999999997654 38899999999999999999884
No 34
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.98 E-value=6.5e-10 Score=78.57 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=47.8
Q ss_pred chhhhhhhccCCC---CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhcCc
Q 027143 159 LSHHYSVLGLDRL---RKAPYTEAEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEAIKQE 221 (227)
Q Consensus 159 ~~d~Y~ILGl~~~---a~~~~t~~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYevL~dp 221 (227)
..++|.||||+++ + +.++|+++||+|...+|||+.++ .-.+.+|+.|+++|...
T Consensus 3 ~~EA~~ILgv~~~~~~a----~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 3 LDESCKILNIEESKGDL----NMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHHTTCCGGGTCC----SHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCcC----CHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 4689999999998 7 99999999999999999999876 46677899999999754
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.83 E-value=2.4e-09 Score=94.48 Aligned_cols=61 Identities=30% Similarity=0.489 Sum_probs=55.9
Q ss_pred hhhhhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHhcCccccc
Q 027143 161 HHYSVLGLDRLRKAPYTEAEIKTAFRAKAKEFHPDQNQGNK--EAAEAKFKEVMVSYEAIKQERKDM 225 (227)
Q Consensus 161 d~Y~ILGl~~~a~~~~t~~eIKkAYR~lakk~HPDk~~~~~--~~a~~~F~~I~~AYevL~dp~kR~ 225 (227)
++|.+||+...+ +..+|+++|+++++++|||+.+.+. +.++++|+.|++||++|+||.+|.
T Consensus 383 ~~y~~lg~~~~~----~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~ 445 (450)
T 2y4t_A 383 DYYKILGVKRNA----KKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRK 445 (450)
T ss_dssp CSGGGSCSSTTC----CTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-
T ss_pred hHHHHhCCCccC----CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 799999999998 9999999999999999999998753 568999999999999999999985
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=79.44 E-value=0.84 Score=43.69 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=34.0
Q ss_pred hhhhhhccCCCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHH
Q 027143 161 HHYSVLGLDRLRKAPYTE--AEIKTAFRAKAKEFHPDQNQGNKEAAEAKFKEVMVSYEA 217 (227)
Q Consensus 161 d~Y~ILGl~~~a~~~~t~--~eIKkAYR~lakk~HPDk~~~~~~~a~~~F~~I~~AYev 217 (227)
++|.|||++.+. .. .+|+++||+||+..+++ .+++..|..|+.|
T Consensus 630 ~~~~~lG~~~~~----~~lr~~~~~ayr~la~~~~~~---------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 630 STNHILGFPFTS----HGLRLGVEASLRSLARVAPTQ---------RHRYTLVDMANKV 675 (681)
T ss_dssp SSSEETTEESSH----HHHHHHHHHHHHHHHHHCSSH---------HHHHHHHHHHHHH
T ss_pred CCcccCCCCCCh----HHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHhccc
Confidence 588999996654 33 56999999999976554 4678888888776
No 37
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=66.29 E-value=1.9 Score=26.59 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=16.0
Q ss_pred HHHHHHHHHhHhhhhccccc
Q 027143 32 VFLFGLIGATATTFALSRPQ 51 (227)
Q Consensus 32 ~~~~~~i~~~~~~~~~~~~q 51 (227)
=.|+|+|-.|++|+.|+++.
T Consensus 8 GIVlGlipvtlaGLfv~Ay~ 27 (37)
T 1q90_G 8 GIVLGLVPVTIAGLFVTAYL 27 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhHHHHHHHHHHHHHH
Confidence 35789999999999987654
No 38
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=60.63 E-value=2.7 Score=25.90 Aligned_cols=19 Identities=26% Similarity=0.275 Sum_probs=15.3
Q ss_pred HHHHHHHHhHhhhhccccc
Q 027143 33 FLFGLIGATATTFALSRPQ 51 (227)
Q Consensus 33 ~~~~~i~~~~~~~~~~~~q 51 (227)
.|+|+|-.|++|+.|+++.
T Consensus 9 IVlGlipvtl~GLfv~Ay~ 27 (37)
T 1vf5_G 9 LVLGLVFATLGGLFYAAYQ 27 (37)
T ss_dssp CHHHHHHHHHHHHTHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 4788999999999887754
No 39
>3mp7_B Preprotein translocase subunit SECE; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus}
Probab=30.67 E-value=34 Score=23.11 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=22.1
Q ss_pred CCCCCcc-ccccchhHHHHHHHHHHHHhHhhhh
Q 027143 15 PSPNGPQ-QEKADVKLWGVFLFGLIGATATTFA 46 (227)
Q Consensus 15 ~~~~~~~-~~~g~~k~~~~~~~~~i~~~~~~~~ 46 (227)
..|+... ..-..+-++|+++.|+||-.+-.+.
T Consensus 23 ~KPd~~Ef~~iak~~~iG~~i~G~iGf~Ikli~ 55 (61)
T 3mp7_B 23 KKPNWATYKRAAKITGLGIILIGLIGMLIRIVG 55 (61)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 6667778889999999988775543
No 40
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=30.59 E-value=16 Score=20.26 Aligned_cols=16 Identities=25% Similarity=0.696 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 027143 70 AWKRYNRRMREEYEEE 85 (227)
Q Consensus 70 a~~r~~~r~~~~~~e~ 85 (227)
||+.+|.+++.-+.|-
T Consensus 2 awknfwsslrkgfydg 17 (26)
T 2khf_A 2 AWKNFWSSLRKGFYDG 17 (26)
T ss_dssp CHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHhhcccc
Confidence 5999999999876654
No 41
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=30.32 E-value=1.3e+02 Score=22.45 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=8.4
Q ss_pred HHHHHHHhHhhhhccc
Q 027143 34 LFGLIGATATTFALSR 49 (227)
Q Consensus 34 ~~~~i~~~~~~~~~~~ 49 (227)
++.++|+.+.++.++.
T Consensus 73 ~~~~~G~~~~~~~~~~ 88 (139)
T 3eff_K 73 VVMVAGITSFGLVTAA 88 (139)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4455555555555544
No 42
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=29.78 E-value=30 Score=20.94 Aligned_cols=26 Identities=8% Similarity=-0.021 Sum_probs=17.6
Q ss_pred cchhHHHHHHHHHHHHhHhhhhcccc
Q 027143 25 ADVKLWGVFLFGLIGATATTFALSRP 50 (227)
Q Consensus 25 g~~k~~~~~~~~~i~~~~~~~~~~~~ 50 (227)
+....+++++.|+....+.+++++.+
T Consensus 5 s~~~sIaagVvglll~vii~l~~~~~ 30 (35)
T 1iij_A 5 SPVTFIIATVVGVLLFLILVVVVGIL 30 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTHH
T ss_pred CCCcEeHHHHHHHHHHHHHHHHhheE
Confidence 34455788888877777777776654
No 43
>2ww9_B Protein transport protein SSS1; ribonucleoprotein, transmembrane, phospho signal sequence, membrane, ribosome, transport; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_B
Probab=25.24 E-value=24 Score=25.26 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=19.1
Q ss_pred ccccchhHHHHHHHHHHHHhHhhhh
Q 027143 22 QEKADVKLWGVFLFGLIGATATTFA 46 (227)
Q Consensus 22 ~~~g~~k~~~~~~~~~i~~~~~~~~ 46 (227)
.+-..+-|+|++|.|+||-.+-.+.
T Consensus 48 ~~iak~t~iG~~imG~IGfiIkLI~ 72 (80)
T 2ww9_B 48 TKIVKAVGIGFIAVGIIGYAIKLIH 72 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777889999999998765443
No 44
>2pjv_A Envelope glycoprotein; HIV, GP41, fusion, peptide, domain, membrane, DPC, viral protein; NMR {Human immunodeficiency virus 1}
Probab=22.44 E-value=25 Score=20.77 Aligned_cols=19 Identities=26% Similarity=0.552 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHhHhhhhc
Q 027143 29 LWGVFLFGLIGATATTFAL 47 (227)
Q Consensus 29 ~~~~~~~~~i~~~~~~~~~ 47 (227)
++|+++||++++.-.+.+.
T Consensus 3 ~lGa~FLGFLgaAGSTMGA 21 (31)
T 2pjv_A 3 GIGALFLGFLGAAGSTVGA 21 (31)
T ss_dssp SHHHHHHTHHHHTCCSSSS
T ss_pred hhhhHHHHHhhccccccch
Confidence 4788888888887665443
No 45
>2wwb_B SEC61gamma, protein transport protein SEC61 subunit gamma; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=22.37 E-value=40 Score=23.29 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=22.3
Q ss_pred CCCCCcc-ccccchhHHHHHHHHHHHHhHhhhh
Q 027143 15 PSPNGPQ-QEKADVKLWGVFLFGLIGATATTFA 46 (227)
Q Consensus 15 ~~~~~~~-~~~g~~k~~~~~~~~~i~~~~~~~~ 46 (227)
..|.+.. .+-..+-|+|+++.|+||-.+-.+.
T Consensus 26 ~KPdr~Ef~~iak~~~iG~~i~G~IGf~IklI~ 58 (68)
T 2wwb_B 26 TKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIH 58 (68)
T ss_dssp CCCCTHHHHHHHHHSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 6667777899999999998765544
No 46
>3bo0_B Preprotein translocase SECE subunit; ribosome-SECY complex, protein translocation; 9.60A {Escherichia coli} PDB: 3bo1_B 3kcr_B
Probab=21.47 E-value=69 Score=21.18 Aligned_cols=32 Identities=28% Similarity=0.539 Sum_probs=19.4
Q ss_pred CCCCCCcccccc---chhHHHHHHHHHHHHhHhhh
Q 027143 14 WPSPNGPQQEKA---DVKLWGVFLFGLIGATATTF 45 (227)
Q Consensus 14 ~~~~~~~~~~~g---~~k~~~~~~~~~i~~~~~~~ 45 (227)
||+.....++-. .+-++++++.+++++.+..+
T Consensus 22 wptrKp~~~e~~~v~~~t~vv~~~v~~i~~~i~li 56 (65)
T 3bo0_B 22 WPTRKPTKDEYLAVAKVTALGISLLGIIGYIIHVP 56 (65)
T ss_dssp CTTTTTCTTHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCCCHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 665543334445 56667777777777666544
No 47
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=20.30 E-value=65 Score=20.41 Aligned_cols=25 Identities=4% Similarity=-0.020 Sum_probs=14.4
Q ss_pred cchhHHHHHHHHHHHHhHhhhhccc
Q 027143 25 ADVKLWGVFLFGLIGATATTFALSR 49 (227)
Q Consensus 25 g~~k~~~~~~~~~i~~~~~~~~~~~ 49 (227)
+....+++++.|++.+.+.+++++.
T Consensus 9 ~~~~~Ia~~vVGvll~vi~~l~~~~ 33 (44)
T 2jwa_A 9 SPLTSIISAVVGILLVVVLGVVFGI 33 (44)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHHHHHHh
Confidence 3344466666676666665555544
Done!