Query 027148
Match_columns 227
No_of_seqs 41 out of 43
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 08:55:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027148.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027148hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mxha_ c.2.1.2 (A:) Dihydropt 56.3 10 0.00076 28.3 5.8 23 187-209 66-88 (266)
2 d1e7wa_ c.2.1.2 (A:) Dihydropt 56.1 2.2 0.00016 32.7 1.8 23 187-209 80-102 (284)
3 d1h2ca_ b.31.1.1 (A:) EV matri 48.3 2.6 0.00019 31.9 1.0 26 84-109 20-51 (125)
4 d1yxma1 c.2.1.2 (A:7-303) Pero 20.8 53 0.0038 25.9 4.6 21 189-209 78-98 (297)
5 d1edoa_ c.2.1.2 (A:) beta-keto 20.0 12 0.00088 28.9 0.4 21 189-209 63-83 (244)
6 d1o17a2 c.27.1.1 (A:71-343) An 14.4 2.6E+02 0.019 22.0 7.5 88 38-143 137-240 (273)
7 d2hc5a1 d.352.1.1 (A:1-109) Hy 13.6 1.7E+02 0.012 20.4 5.5 56 134-197 36-102 (109)
8 d1mr1c_ d.217.1.2 (C:) SMAD4-b 11.3 80 0.0058 22.6 3.0 18 187-204 80-97 (97)
9 d1fltx_ b.1.1.4 (X:) Second do 9.7 78 0.0057 21.6 2.3 18 77-96 12-29 (95)
10 d2mev1_ b.121.4.1 (1:) Mengo e 9.2 57 0.0041 26.7 1.6 24 76-99 233-256 (268)
No 1
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=56.25 E-value=10 Score=28.29 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=19.9
Q ss_pred hhHHHHHhHHHHHHHhhcccccC
Q 027148 187 TVLDKVKDFFGDAKESFGKITAL 209 (227)
Q Consensus 187 t~~dkVkdff~~~k~~fg~~~~~ 209 (227)
+..|.++++|+.+.+.||.|-.|
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iDil 88 (266)
T d1mxha_ 66 SLLDCCEDIIDCSFRAFGRCDVL 88 (266)
T ss_dssp THHHHHHHHHHHHHHHHSCCCEE
T ss_pred hHHHHHHHHHHHHHHHhCCCCEE
Confidence 45678899999999999999877
No 2
>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}
Probab=56.07 E-value=2.2 Score=32.71 Aligned_cols=23 Identities=13% Similarity=0.401 Sum_probs=19.8
Q ss_pred hhHHHHHhHHHHHHHhhcccccC
Q 027148 187 TVLDKVKDFFGDAKESFGKITAL 209 (227)
Q Consensus 187 t~~dkVkdff~~~k~~fg~~~~~ 209 (227)
+..+.++++|..+.+.||.|.-|
T Consensus 80 ~~~~~v~~~~~~~~~~~G~iDiL 102 (284)
T d1e7wa_ 80 TLFTRCAELVAACYTHWGRCDVL 102 (284)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCEE
Confidence 44678999999999999998776
No 3
>d1h2ca_ b.31.1.1 (A:) EV matrix protein {Ebola virus [TaxId: 205488]}
Probab=48.29 E-value=2.6 Score=31.94 Aligned_cols=26 Identities=38% Similarity=0.669 Sum_probs=19.4
Q ss_pred EecCCcceeeceeeccC------chHHHHHHH
Q 027148 84 RMANVYLWYPLSIITGG------TTAKIMVAA 109 (227)
Q Consensus 84 R~kg~~~WyPlgvvaGg------~~Ak~lV~a 109 (227)
-.|+.+.|+|||++.-. ++|.+|.++
T Consensus 20 ~~k~ip~wlplgi~~~~~y~~~~t~aa~~~~s 51 (125)
T d1h2ca_ 20 LMKQIPIWLPLGVADQKTYSFDSTTAAIMLAS 51 (125)
T ss_dssp EEEEEEEEEEEEEECSSSSCHHHHHHHHHHSC
T ss_pred hhccCceeeecccccccccchHHHHHHHHhcc
Confidence 35789999999999765 456566555
No 4
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.81 E-value=53 Score=25.92 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=18.0
Q ss_pred HHHHHhHHHHHHHhhcccccC
Q 027148 189 LDKVKDFFGDAKESFGKITAL 209 (227)
Q Consensus 189 ~dkVkdff~~~k~~fg~~~~~ 209 (227)
-+.++++|..+.+.||.|..|
T Consensus 78 ~~~v~~~~~~~~~~~G~iDiL 98 (297)
T d1yxma1 78 EEEVNNLVKSTLDTFGKINFL 98 (297)
T ss_dssp HHHHHHHHHHHHHHHSCCCEE
T ss_pred HHHHHHHHHHHHHHhCCeEEE
Confidence 467889999999999998877
No 5
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}
Probab=20.03 E-value=12 Score=28.92 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=18.0
Q ss_pred HHHHHhHHHHHHHhhcccccC
Q 027148 189 LDKVKDFFGDAKESFGKITAL 209 (227)
Q Consensus 189 ~dkVkdff~~~k~~fg~~~~~ 209 (227)
-+.+++++..+.+.||.|-.|
T Consensus 63 ~~~v~~~~~~~~~~~g~iDiL 83 (244)
T d1edoa_ 63 EADVEAMMKTAIDAWGTIDVV 83 (244)
T ss_dssp HHHHHHHHHHHHHHSSCCSEE
T ss_pred HHHHHHHHHHHHHHcCCCCcc
Confidence 467889999999999999776
No 6
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=14.44 E-value=2.6e+02 Score=21.98 Aligned_cols=88 Identities=9% Similarity=0.093 Sum_probs=56.1
Q ss_pred ccccceeEEEEecccccccccccCCCCCCCCCCCCCCCCceEEEEEEecCCc--ce---------eeceeeccCc---hH
Q 027148 38 RERQRRVLVVQAKGKRGLQARQFQRPPPPSLPKIEDDGNPRFVIFIRMANVY--LW---------YPLSIITGGT---TA 103 (227)
Q Consensus 38 ~~~~~~~~~v~akGk~g~~~rq~qqq~~p~~p~i~~dGnp~FvIFVR~kg~~--~W---------yPlgvvaGg~---~A 103 (227)
+.+.+++++|.|-+ + +|++... .+..+++++..... .| +|+.-+.|++ .|
T Consensus 137 ~lg~~~a~vv~G~d---G------------~DEis~~-g~t~v~~~~~g~i~~~~i~P~d~Gl~~~~~~~l~gg~~~ena 200 (273)
T d1o17a2 137 ELDFNKIILVYGEP---G------------IDEVSPI-GNTFMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAEDSA 200 (273)
T ss_dssp TSCCSEEEEEEETT---T------------BSSCCSS-SEEEEEEEETTEEEEEEEEGGGGTCCCCCGGGTBCSSHHHHH
T ss_pred hhcccceEEecCCc---c------------ccchhcc-ccceeeecccccceeeeeehhhhcccccccccccccCchHHH
Confidence 45566899998853 1 7888666 46677777654321 22 4555567775 56
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHHHhhcHH--HHHHHHH
Q 027148 104 KIMVAAKDNFLGKYIYKDTLARNLAAVIYRDEK--EIQKTAF 143 (227)
Q Consensus 104 k~lV~a~dn~lgk~iyk~tL~~nIa~aIYkdee--~L~k~a~ 143 (227)
+++.+.+.+. ..=+.+.+..|-|.++|-... .|++.+.
T Consensus 201 ~~i~~il~G~--~~~~~d~V~lNAA~aL~~~g~~~sl~eg~~ 240 (273)
T d1o17a2 201 IKIVRAFLGK--DEHVAEFIKINTAVALFALDRVGDFREGYE 240 (273)
T ss_dssp HHHHHHHHTS--CHHHHHHHHHHHHHHHHHTTSSSSHHHHHH
T ss_pred HHHHHHHcCC--CcHHHHHHHHHHHHHHHHcCCcCCHHHHHH
Confidence 6777777665 244568899999999985432 3444433
No 7
>d2hc5a1 d.352.1.1 (A:1-109) Hypothetical protein YvyC {Bacillus subtilis [TaxId: 1423]}
Probab=13.61 E-value=1.7e+02 Score=20.35 Aligned_cols=56 Identities=18% Similarity=0.444 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHhchhhhc-ccceeeee---------EEeecCccccccCCCCee-ecCCCCcchhhHHHHHhHHH
Q 027148 134 DEKEIQKTAFKQFRVLQS-ATEFRYGY---------KLVENGNLRAALSTSDVI-ELPTPDKLKTVLDKVKDFFG 197 (227)
Q Consensus 134 dee~L~k~a~R~yP~Lk~-~~efEYGY---------Kl~dk~np~s~l~~~dvi-~iP~~eelkt~~dkVkdff~ 197 (227)
+.++|++++-+.--.|.. ...|+|.+ +++|.. +.+|| +||++ ++-..+.++.++-|
T Consensus 36 s~~~l~~~v~~ln~~l~~~~~~L~F~~de~~~~~vVkVvD~~-------T~eVIRqIP~E-e~l~l~~~i~e~~G 102 (109)
T d2hc5a1 36 SYTNLAEMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDS-------TNEVIREIPPK-RWLDFYAAMTEFLG 102 (109)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEETT-------TTEEEEEECHH-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCEEEEEEECC-------CCeeeeeCCCH-HHHHHHHHHHHHhC
Confidence 346677766665555554 56777776 677774 67788 78865 44344555555443
No 8
>d1mr1c_ d.217.1.2 (C:) SMAD4-binding domain of oncoprotein Ski {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.35 E-value=80 Score=22.62 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=14.7
Q ss_pred hhHHHHHhHHHHHHHhhc
Q 027148 187 TVLDKVKDFFGDAKESFG 204 (227)
Q Consensus 187 t~~dkVkdff~~~k~~fg 204 (227)
.--+++...|.++|+||+
T Consensus 80 ~~~~~l~~~~edvK~~Fn 97 (97)
T d1mr1c_ 80 EEQARLGRCLDDVKEKFD 97 (97)
T ss_dssp THHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHhhC
Confidence 346678899999999995
No 9
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.68 E-value=78 Score=21.58 Aligned_cols=18 Identities=22% Similarity=0.384 Sum_probs=14.2
Q ss_pred ceEEEEEEecCCcceeecee
Q 027148 77 PRFVIFIRMANVYLWYPLSI 96 (227)
Q Consensus 77 p~FvIFVR~kg~~~WyPlgv 96 (227)
|+ +|||+. |.+.|+||=+
T Consensus 12 p~-~V~v~e-g~~~vIPC~v 29 (95)
T d1fltx_ 12 PE-IIHMTE-GRELVIPCRV 29 (95)
T ss_dssp CE-EEEECT-TSCEEECCCB
T ss_pred CC-EEEEeC-CCCEEEEccC
Confidence 55 899987 6678999964
No 10
>d2mev1_ b.121.4.1 (1:) Mengo encephalomyocarditis virus coat proteins {Mengovirus [TaxId: 12107]}
Probab=9.21 E-value=57 Score=26.70 Aligned_cols=24 Identities=17% Similarity=0.470 Sum_probs=19.6
Q ss_pred CceEEEEEEecCCcceeeceeecc
Q 027148 76 NPRFVIFIRMANVYLWYPLSIITG 99 (227)
Q Consensus 76 np~FvIFVR~kg~~~WyPlgvvaG 99 (227)
+-.|.||||.|+...|.|==++..
T Consensus 233 ~~~~~Vy~R~K~~r~ycPRP~~~~ 256 (268)
T d2mev1_ 233 DIKFTVYLRYKNMRVFCPRPTVFF 256 (268)
T ss_dssp TCCEEEEEEEEEEEEESCCCCCCC
T ss_pred CcEEEEEEEeceeEEEcCCCCcCC
Confidence 457999999999999999665543
Done!