Query 027149
Match_columns 227
No_of_seqs 167 out of 208
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 08:57:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.3 0.00015 5.1E-09 48.3 3.2 54 48-101 9-65 (66)
2 2ct1_A Transcriptional repress 97.3 0.00016 5.6E-09 49.8 3.4 54 49-102 15-71 (77)
3 3uk3_C Zinc finger protein 217 96.7 0.0009 3.1E-08 43.0 2.4 52 48-101 3-57 (57)
4 2yt9_A Zinc finger-containing 96.6 0.0018 6E-08 45.6 3.8 51 49-101 7-60 (95)
5 1x5w_A Zinc finger protein 64, 96.5 0.0018 6.3E-08 43.6 3.1 53 48-102 8-63 (70)
6 1x6h_A Transcriptional repress 96.4 0.0025 8.4E-08 43.9 3.6 54 49-102 15-73 (86)
7 2eod_A TNF receptor-associated 96.4 0.0021 7.1E-08 43.2 3.1 48 48-98 9-59 (66)
8 1bbo_A Human enhancer-binding 96.3 0.0038 1.3E-07 40.0 3.8 50 50-101 2-54 (57)
9 2adr_A ADR1; transcription reg 96.2 0.005 1.7E-07 39.9 3.8 51 49-101 2-55 (60)
10 2ctd_A Zinc finger protein 512 96.1 0.0035 1.2E-07 46.1 3.3 51 48-101 33-87 (96)
11 1x6e_A Zinc finger protein 24; 96.0 0.004 1.4E-07 42.2 2.9 52 48-101 13-67 (72)
12 2gqj_A Zinc finger protein KIA 96.0 0.00093 3.2E-08 48.6 -0.4 54 48-102 23-80 (98)
13 2cot_A Zinc finger protein 435 95.9 0.0088 3E-07 40.9 4.2 52 48-101 17-71 (77)
14 2dmd_A Zinc finger protein 64, 95.8 0.0076 2.6E-07 42.4 3.5 50 49-100 8-60 (96)
15 2wbt_A B-129; zinc finger; 2.7 95.6 0.0092 3.1E-07 44.6 3.6 51 49-103 74-127 (129)
16 2dlq_A GLI-kruppel family memb 95.5 0.011 3.7E-07 43.2 3.8 53 49-101 35-91 (124)
17 2ee8_A Protein ODD-skipped-rel 95.4 0.017 5.9E-07 41.3 4.5 52 48-101 16-70 (106)
18 2d9k_A FLN29 gene product; zin 95.4 0.0035 1.2E-07 44.2 0.6 47 49-98 17-64 (75)
19 2d9h_A Zinc finger protein 692 95.4 0.0052 1.8E-07 42.1 1.5 56 48-103 6-65 (78)
20 1a1h_A QGSR zinc finger peptid 95.4 0.0096 3.3E-07 41.2 2.8 48 50-99 35-85 (90)
21 2kmk_A Zinc finger protein GFI 95.4 0.0072 2.5E-07 41.0 2.1 49 49-99 29-80 (82)
22 2lv2_A Insulinoma-associated p 95.3 0.014 4.7E-07 42.7 3.7 53 48-102 27-82 (85)
23 2dmd_A Zinc finger protein 64, 95.3 0.015 5.3E-07 40.7 3.8 53 48-102 35-90 (96)
24 2rpc_A Zinc finger protein ZIC 95.3 0.015 5.1E-07 44.5 3.9 54 48-101 24-87 (155)
25 2ej4_A Zinc finger protein ZIC 95.3 0.015 5.3E-07 40.8 3.7 54 48-101 24-87 (95)
26 2dlq_A GLI-kruppel family memb 95.2 0.012 4E-07 42.9 3.1 53 48-102 65-120 (124)
27 2lce_A B-cell lymphoma 6 prote 95.2 0.012 4.1E-07 39.9 2.9 52 48-101 16-70 (74)
28 2yt9_A Zinc finger-containing 95.0 0.015 5.1E-07 40.7 3.1 55 48-102 34-91 (95)
29 2csh_A Zinc finger protein 297 95.0 0.012 4.1E-07 42.6 2.5 51 50-102 38-91 (110)
30 2ee8_A Protein ODD-skipped-rel 94.9 0.025 8.6E-07 40.5 4.1 52 48-101 44-98 (106)
31 2kmk_A Zinc finger protein GFI 94.9 0.011 3.9E-07 40.0 2.0 50 50-101 2-54 (82)
32 1wge_A Hypothetical protein 26 94.4 0.017 5.7E-07 43.2 2.0 48 30-89 14-63 (83)
33 2epx_A Zinc finger protein 28 94.3 0.036 1.2E-06 33.9 3.1 35 49-84 12-47 (47)
34 2jr7_A DPH3 homolog; DESR1, CS 94.2 0.016 5.6E-07 43.9 1.6 48 30-89 7-56 (89)
35 2ytn_A Zinc finger protein 347 94.2 0.046 1.6E-06 33.5 3.5 35 48-84 11-46 (46)
36 4gzn_C ZFP-57, zinc finger pro 94.1 0.033 1.1E-06 38.1 2.9 48 49-98 4-54 (60)
37 2eq0_A Zinc finger protein 347 94.0 0.041 1.4E-06 33.7 3.0 35 48-84 11-46 (46)
38 1wjp_A Zinc finger protein 295 93.9 0.03 1E-06 40.4 2.6 45 49-97 16-63 (107)
39 2em0_A Zinc finger protein 224 93.8 0.052 1.8E-06 33.2 3.2 34 49-84 12-46 (46)
40 2eop_A Zinc finger protein 268 93.7 0.054 1.8E-06 33.0 3.2 34 49-84 12-46 (46)
41 1llm_C Chimera of ZIF23-GCN4; 93.7 0.0049 1.7E-07 43.3 -2.0 51 49-101 3-56 (88)
42 1llm_C Chimera of ZIF23-GCN4; 93.7 0.025 8.5E-07 39.5 1.7 53 48-103 30-85 (88)
43 2ema_A Zinc finger protein 347 93.7 0.044 1.5E-06 33.5 2.7 35 48-84 11-46 (46)
44 1ubd_C Protein (YY1 zinc finge 93.6 0.066 2.3E-06 39.2 3.9 51 48-101 4-59 (124)
45 2dmi_A Teashirt homolog 3; zin 93.5 0.037 1.3E-06 40.2 2.5 52 49-100 19-76 (115)
46 2ene_A Zinc finger protein 347 93.5 0.056 1.9E-06 33.0 2.9 34 49-84 12-46 (46)
47 2eps_A POZ-, at HOOK-, and zin 93.2 0.058 2E-06 34.6 2.8 39 48-87 11-50 (54)
48 2gli_A Protein (five-finger GL 93.2 0.044 1.5E-06 41.6 2.5 51 49-101 67-124 (155)
49 2em5_A ZFP-95, zinc finger pro 93.2 0.069 2.4E-06 32.7 3.0 35 48-84 11-46 (46)
50 2ep2_A Zinc finger protein 484 93.1 0.068 2.3E-06 32.7 2.9 34 49-84 12-46 (46)
51 1yop_A KTI11P; zinc finger, me 93.1 0.03 1E-06 41.8 1.4 48 30-89 7-56 (83)
52 2el4_A Zinc finger protein 268 93.1 0.073 2.5E-06 32.4 3.0 34 49-84 12-46 (46)
53 2ebt_A Krueppel-like factor 5; 93.0 0.077 2.6E-06 37.2 3.4 52 48-101 14-72 (100)
54 2eoq_A Zinc finger protein 224 93.0 0.067 2.3E-06 32.7 2.7 34 49-84 12-46 (46)
55 2ytq_A Zinc finger protein 268 93.0 0.079 2.7E-06 32.4 3.1 34 49-84 12-46 (46)
56 2em9_A Zinc finger protein 224 93.0 0.075 2.6E-06 32.3 3.0 34 49-84 12-46 (46)
57 1wjp_A Zinc finger protein 295 93.0 0.04 1.4E-06 39.7 1.9 50 49-101 42-94 (107)
58 2emy_A Zinc finger protein 268 92.8 0.051 1.8E-06 33.2 2.0 35 48-84 11-46 (46)
59 2dlk_A Novel protein; ZF-C2H2 92.8 0.069 2.4E-06 36.0 2.8 53 48-101 6-65 (79)
60 2emf_A Zinc finger protein 484 92.8 0.092 3.1E-06 32.1 3.2 34 49-84 12-46 (46)
61 2ytr_A Zinc finger protein 347 92.8 0.089 3.1E-06 32.0 3.1 34 49-84 12-46 (46)
62 2ghf_A ZHX1, zinc fingers and 92.8 0.067 2.3E-06 40.3 2.9 49 48-96 17-70 (102)
63 2enc_A Zinc finger protein 224 92.7 0.075 2.6E-06 32.5 2.6 34 49-84 12-46 (46)
64 2eoe_A Zinc finger protein 347 92.7 0.063 2.1E-06 32.7 2.2 34 49-84 12-46 (46)
65 2eov_A Zinc finger protein 484 92.6 0.062 2.1E-06 32.7 2.2 34 49-84 12-46 (46)
66 2ytj_A Zinc finger protein 484 92.6 0.078 2.7E-06 32.4 2.6 34 49-84 12-46 (46)
67 2epz_A Zinc finger protein 28 92.6 0.11 3.6E-06 31.7 3.2 34 49-84 12-46 (46)
68 2ytk_A Zinc finger protein 347 92.6 0.057 1.9E-06 33.0 1.9 35 48-84 11-46 (46)
69 2epw_A Zinc finger protein 268 92.6 0.066 2.3E-06 32.6 2.2 34 49-84 12-46 (46)
70 2i13_A AART; DNA binding, zinc 92.4 0.06 2.1E-06 42.5 2.4 51 49-101 105-158 (190)
71 2lt7_A Transcriptional regulat 92.4 0.047 1.6E-06 42.4 1.7 49 48-98 21-72 (133)
72 2eme_A Zinc finger protein 473 92.4 0.11 3.6E-06 31.6 3.0 34 49-84 12-46 (46)
73 2emk_A Zinc finger protein 28 92.3 0.073 2.5E-06 32.6 2.2 34 49-84 12-46 (46)
74 1f2i_G Fusion of N-terminal 17 92.3 0.065 2.2E-06 35.8 2.1 49 48-98 18-71 (73)
75 2eq4_A Zinc finger protein 224 92.3 0.082 2.8E-06 32.2 2.4 34 49-84 12-46 (46)
76 2em7_A Zinc finger protein 224 92.3 0.11 3.8E-06 31.6 3.0 34 49-84 12-46 (46)
77 1a1h_A QGSR zinc finger peptid 92.2 0.065 2.2E-06 36.9 2.1 52 48-101 3-59 (90)
78 2ytg_A ZFP-95, zinc finger pro 92.2 0.1 3.5E-06 31.8 2.8 34 49-84 12-46 (46)
79 2ep0_A Zinc finger protein 28 92.1 0.11 3.9E-06 31.6 2.9 34 49-84 12-46 (46)
80 2elz_A Zinc finger protein 224 91.9 0.13 4.5E-06 31.4 3.1 34 49-84 12-46 (46)
81 2ely_A Zinc finger protein 224 91.9 0.071 2.4E-06 32.6 1.8 34 49-84 12-46 (46)
82 2dmi_A Teashirt homolog 3; zin 91.8 0.069 2.4E-06 38.8 1.9 53 48-102 49-106 (115)
83 2en8_A Zinc finger protein 224 91.8 0.13 4.6E-06 31.1 3.0 34 49-84 12-46 (46)
84 2en6_A Zinc finger protein 268 91.7 0.058 2E-06 33.0 1.2 35 48-84 11-46 (46)
85 2ep3_A Zinc finger protein 484 91.7 0.13 4.6E-06 31.2 2.9 34 49-84 12-46 (46)
86 2ysp_A Zinc finger protein 224 91.7 0.09 3.1E-06 32.1 2.1 34 49-84 12-46 (46)
87 2csh_A Zinc finger protein 297 91.6 0.12 4E-06 37.2 3.0 52 48-102 9-63 (110)
88 2epr_A POZ-, at HOOK-, and zin 91.6 0.11 3.6E-06 32.3 2.4 36 48-85 11-47 (48)
89 2emh_A Zinc finger protein 484 91.6 0.08 2.7E-06 32.3 1.8 34 49-84 12-46 (46)
90 1tf6_A Protein (transcription 91.6 0.16 5.3E-06 40.1 3.9 49 50-98 73-128 (190)
91 2j7j_A Transcription factor II 91.6 0.088 3E-06 35.5 2.2 50 50-101 2-58 (85)
92 2eml_A Zinc finger protein 28 91.6 0.14 4.7E-06 31.2 2.9 34 49-84 12-46 (46)
93 2en1_A Zinc finger protein 224 91.5 0.099 3.4E-06 31.9 2.2 34 49-84 12-46 (46)
94 2gli_A Protein (five-finger GL 91.5 0.14 4.7E-06 38.8 3.4 53 49-101 3-64 (155)
95 2ytm_A Zinc finger protein 28 91.5 0.064 2.2E-06 33.0 1.2 34 49-84 12-46 (46)
96 1ubd_C Protein (YY1 zinc finge 91.4 0.16 5.4E-06 37.1 3.6 52 48-101 33-89 (124)
97 2eoo_A ZFP-95, zinc finger pro 91.4 0.072 2.5E-06 32.6 1.4 34 49-84 12-46 (46)
98 2el6_A Zinc finger protein 268 91.4 0.15 5.3E-06 31.1 3.0 34 49-84 12-46 (46)
99 2ytd_A Zinc finger protein 473 91.3 0.12 4E-06 31.6 2.3 34 49-84 12-46 (46)
100 2emm_A ZFP-95, zinc finger pro 91.1 0.12 4.2E-06 31.3 2.3 34 49-84 12-46 (46)
101 2epq_A POZ-, at HOOK-, and zin 91.0 0.094 3.2E-06 31.9 1.6 34 49-84 10-44 (45)
102 2i13_A AART; DNA binding, zinc 90.7 0.1 3.6E-06 41.2 2.1 50 49-100 21-73 (190)
103 2yu8_A Zinc finger protein 347 90.4 0.084 2.9E-06 32.2 1.1 34 49-84 12-46 (46)
104 2emp_A Zinc finger protein 347 90.4 0.12 3.9E-06 31.6 1.7 34 49-84 12-46 (46)
105 2emx_A Zinc finger protein 268 90.4 0.15 5.1E-06 30.7 2.2 34 49-84 10-44 (44)
106 2ytt_A Zinc finger protein 473 90.3 0.09 3.1E-06 32.2 1.1 34 49-84 12-46 (46)
107 2yso_A ZFP-95, zinc finger pro 90.0 0.18 6.3E-06 30.6 2.4 34 49-84 12-46 (46)
108 2j7j_A Transcription factor II 89.9 0.15 5.1E-06 34.4 2.1 48 48-100 30-85 (85)
109 2em8_A Zinc finger protein 224 89.6 0.13 4.4E-06 31.4 1.5 34 49-84 12-46 (46)
110 2wbs_A Krueppel-like factor 4; 89.5 0.22 7.7E-06 34.0 2.8 52 48-101 4-62 (89)
111 2em2_A Zinc finger protein 28 89.3 0.21 7.3E-06 30.4 2.3 34 49-84 12-46 (46)
112 2wbs_A Krueppel-like factor 4; 88.8 0.35 1.2E-05 33.0 3.4 49 48-98 34-87 (89)
113 1wgm_A Ubiquitin conjugation f 88.5 0.37 1.3E-05 36.0 3.5 35 48-89 21-68 (98)
114 2rpc_A Zinc finger protein ZIC 88.3 0.47 1.6E-05 35.9 4.1 51 50-102 63-118 (155)
115 1vd4_A Transcription initiatio 88.1 0.2 6.9E-06 33.1 1.6 35 49-87 14-48 (62)
116 1tf6_A Protein (transcription 88.0 0.47 1.6E-05 37.3 4.1 52 48-101 103-161 (190)
117 2lt7_A Transcriptional regulat 87.9 0.19 6.5E-06 38.9 1.6 52 49-102 50-104 (133)
118 2ctu_A Zinc finger protein 483 87.3 0.054 1.8E-06 35.7 -1.6 45 48-100 17-63 (73)
119 2l6l_A DNAJ homolog subfamily 87.2 0.12 4.2E-06 41.2 0.1 50 33-95 99-150 (155)
120 2kr4_A Ubiquitin conjugation f 87.0 0.29 1E-05 35.3 2.1 35 48-89 13-59 (85)
121 2ysl_A Tripartite motif-contai 87.0 0.15 5E-06 34.9 0.4 43 48-90 19-69 (73)
122 2jp9_A Wilms tumor 1; DNA bind 86.5 0.32 1.1E-05 34.9 2.1 47 50-98 37-88 (119)
123 1t1h_A Gspef-atpub14, armadill 86.4 0.22 7.5E-06 34.5 1.1 42 48-89 7-54 (78)
124 2ep1_A Zinc finger protein 484 85.8 0.64 2.2E-05 28.0 2.9 33 49-83 12-45 (46)
125 1paa_A Yeast transcription fac 85.4 0.54 1.8E-05 25.2 2.2 26 49-74 2-28 (30)
126 2ebt_A Krueppel-like factor 5; 85.3 0.59 2E-05 32.5 2.9 50 48-99 44-98 (100)
127 2lv2_A Insulinoma-associated p 84.8 0.51 1.7E-05 34.2 2.4 29 49-77 56-85 (85)
128 3mjh_B Early endosome antigen 84.7 0.47 1.6E-05 29.8 1.9 28 48-75 4-32 (34)
129 2kre_A Ubiquitin conjugation f 84.7 0.71 2.4E-05 34.5 3.3 35 48-89 28-74 (100)
130 2epa_A Krueppel-like factor 10 84.6 0.71 2.4E-05 30.5 3.0 48 48-97 16-70 (72)
131 2jp9_A Wilms tumor 1; DNA bind 84.5 0.52 1.8E-05 33.8 2.4 52 48-101 5-63 (119)
132 2enf_A Zinc finger protein 347 84.4 0.87 3E-05 27.4 3.1 33 49-83 12-45 (46)
133 2emg_A Zinc finger protein 484 84.4 0.94 3.2E-05 27.3 3.2 33 49-83 12-45 (46)
134 2em3_A Zinc finger protein 28 84.4 0.51 1.7E-05 28.5 2.0 33 49-83 12-45 (46)
135 2eon_A ZFP-95, zinc finger pro 84.2 0.92 3.2E-05 27.5 3.2 33 49-83 12-45 (46)
136 1wii_A Hypothetical UPF0222 pr 84.1 0.26 8.8E-06 36.9 0.6 35 48-87 22-56 (85)
137 2eq2_A Zinc finger protein 347 84.1 0.88 3E-05 27.4 3.0 33 49-83 12-45 (46)
138 2yti_A Zinc finger protein 347 83.9 0.83 2.9E-05 27.5 2.9 33 49-83 12-45 (46)
139 2yts_A Zinc finger protein 484 83.9 0.94 3.2E-05 27.2 3.1 33 49-83 12-45 (46)
140 2emi_A Zinc finger protein 484 83.8 0.83 2.9E-05 27.5 2.8 33 49-83 12-45 (46)
141 2ytp_A Zinc finger protein 484 83.1 0.97 3.3E-05 27.3 2.9 33 49-83 12-45 (46)
142 2yth_A Zinc finger protein 224 82.9 1.1 3.6E-05 27.1 3.0 33 49-83 12-45 (46)
143 2eq1_A Zinc finger protein 347 81.9 1.2 4.2E-05 26.7 3.1 33 49-83 12-45 (46)
144 2eow_A Zinc finger protein 347 81.4 0.79 2.7E-05 27.5 2.0 33 49-83 12-45 (46)
145 3ztg_A E3 ubiquitin-protein li 81.4 0.11 3.8E-06 37.2 -2.3 41 48-88 12-60 (92)
146 2egp_A Tripartite motif-contai 81.0 0.64 2.2E-05 31.9 1.6 43 48-90 11-65 (79)
147 2emj_A Zinc finger protein 28 80.8 0.79 2.7E-05 27.7 1.9 33 49-83 12-45 (46)
148 2yrj_A Zinc finger protein 473 80.5 1.3 4.5E-05 26.5 2.8 33 49-83 12-45 (46)
149 2ytf_A Zinc finger protein 268 80.3 1.3 4.4E-05 26.5 2.7 33 49-83 12-45 (46)
150 2adr_A ADR1; transcription reg 80.0 1.3 4.3E-05 28.1 2.7 28 49-76 30-58 (60)
151 2el5_A Zinc finger protein 268 79.9 1.4 4.7E-05 25.9 2.7 32 49-82 10-42 (42)
152 2eoy_A Zinc finger protein 473 79.7 1.4 4.6E-05 26.6 2.7 34 49-83 12-46 (46)
153 6rxn_A Rubredoxin; electron tr 79.4 0.8 2.7E-05 30.5 1.6 33 48-86 3-38 (46)
154 2em4_A Zinc finger protein 28 79.0 1.2 3.9E-05 26.9 2.2 33 49-83 12-45 (46)
155 1wir_A Protein arginine N-meth 78.9 1 3.5E-05 35.5 2.4 31 48-78 14-45 (121)
156 2en9_A Zinc finger protein 28 78.9 1.2 4E-05 26.9 2.2 33 49-83 12-45 (46)
157 1twf_L ABC10-alpha, DNA-direct 78.8 0.77 2.6E-05 33.0 1.5 29 48-88 27-55 (70)
158 3hcs_A TNF receptor-associated 78.8 1.2 4.2E-05 35.3 2.9 49 49-100 82-133 (170)
159 2ct1_A Transcriptional repress 78.4 1.1 3.6E-05 30.1 2.0 28 49-76 45-73 (77)
160 1klr_A Zinc finger Y-chromosom 78.2 1 3.4E-05 23.8 1.6 23 50-72 3-26 (30)
161 2epu_A Zinc finger protein 32; 78.1 1.2 4E-05 26.8 2.0 33 49-83 12-45 (45)
162 1e4u_A Transcriptional repress 77.9 0.66 2.3E-05 33.3 0.9 41 48-89 10-61 (78)
163 3pwf_A Rubrerythrin; non heme 77.8 1.6 5.3E-05 35.9 3.3 25 48-86 137-161 (170)
164 2ect_A Ring finger protein 126 77.7 0.92 3.1E-05 31.3 1.6 42 48-89 14-63 (78)
165 2ent_A Krueppel-like factor 15 77.6 2.1 7.1E-05 25.7 3.1 35 48-84 11-48 (48)
166 2ecv_A Tripartite motif-contai 77.3 0.4 1.4E-05 33.1 -0.4 43 48-90 18-71 (85)
167 2elp_A Zinc finger protein 406 77.2 0.8 2.7E-05 26.1 1.0 21 49-69 9-31 (37)
168 2eof_A Zinc finger protein 268 76.8 1.7 5.8E-05 25.6 2.5 32 49-82 12-44 (44)
169 2yrm_A B-cell lymphoma 6 prote 76.7 1.6 5.4E-05 26.0 2.3 33 49-83 10-43 (43)
170 2em6_A Zinc finger protein 224 76.7 2.1 7.3E-05 25.6 3.0 33 49-83 12-45 (46)
171 2csy_A Zinc finger protein 183 76.5 0.33 1.1E-05 34.0 -1.1 42 48-89 14-60 (81)
172 2ecw_A Tripartite motif-contai 76.5 0.39 1.3E-05 33.2 -0.7 43 48-90 18-71 (85)
173 2eor_A Zinc finger protein 224 76.3 1.2 4E-05 26.7 1.6 33 49-83 12-45 (46)
174 2k5c_A Uncharacterized protein 76.1 0.76 2.6E-05 34.7 0.8 13 48-60 50-62 (95)
175 2ysj_A Tripartite motif-contai 76.1 0.51 1.7E-05 31.4 -0.1 14 48-61 19-32 (63)
176 1zw8_A Zinc-responsive transcr 75.9 2.4 8.2E-05 29.0 3.3 46 55-100 9-64 (64)
177 2c2l_A CHIP, carboxy terminus 75.4 1.5 5.3E-05 36.5 2.7 36 48-89 207-254 (281)
178 2dlk_A Novel protein; ZF-C2H2 74.9 1.3 4.5E-05 29.4 1.7 37 48-86 37-76 (79)
179 1znf_A 31ST zinc finger from X 74.9 2.2 7.5E-05 22.1 2.4 20 50-69 2-22 (27)
180 2ecj_A Tripartite motif-contai 74.4 1 3.6E-05 28.9 1.1 14 48-61 14-27 (58)
181 2eom_A ZFP-95, zinc finger pro 74.3 1.8 6.1E-05 26.1 2.1 33 49-83 12-45 (46)
182 2enh_A Zinc finger protein 28 74.2 2.7 9.3E-05 25.2 3.0 32 49-82 12-44 (46)
183 2k5c_A Uncharacterized protein 74.1 0.85 2.9E-05 34.4 0.6 38 49-86 8-59 (95)
184 3iuf_A Zinc finger protein UBI 74.1 1.7 5.7E-05 27.0 2.0 29 49-77 7-36 (48)
185 1x6h_A Transcriptional repress 74.0 2.3 8E-05 28.4 2.9 37 49-87 47-84 (86)
186 2kiz_A E3 ubiquitin-protein li 73.8 0.42 1.4E-05 32.3 -1.1 42 48-89 13-62 (69)
187 2m0f_A Zinc finger and BTB dom 73.7 1.7 5.8E-05 22.7 1.7 21 49-69 2-23 (29)
188 2en7_A Zinc finger protein 268 73.7 2.9 0.0001 24.5 3.0 31 49-81 12-43 (44)
189 1ard_A Yeast transcription fac 73.7 1.6 5.5E-05 22.9 1.6 22 49-70 2-24 (29)
190 2eoz_A Zinc finger protein 473 73.6 1.3 4.4E-05 26.7 1.3 33 49-83 12-45 (46)
191 1lko_A Rubrerythrin all-iron(I 73.6 1 3.5E-05 37.4 1.1 26 48-86 154-179 (191)
192 2elu_A Zinc finger protein 406 73.4 1.1 3.7E-05 28.3 0.9 25 50-74 10-35 (37)
193 1bor_A Transcription factor PM 73.3 1.7 5.7E-05 28.6 1.9 42 48-89 5-48 (56)
194 2yur_A Retinoblastoma-binding 73.3 0.52 1.8E-05 32.6 -0.7 40 48-87 14-61 (74)
195 2m0d_A Zinc finger and BTB dom 73.3 1.9 6.6E-05 22.6 1.9 22 49-70 3-25 (30)
196 2f42_A STIP1 homology and U-bo 72.4 2 6.9E-05 35.7 2.6 36 48-89 105-152 (179)
197 1p7a_A BF3, BKLF, kruppel-like 72.1 2.5 8.4E-05 23.9 2.3 22 49-70 11-33 (37)
198 2d9h_A Zinc finger protein 692 72.0 3.2 0.00011 27.7 3.1 30 48-77 37-67 (78)
199 2els_A Zinc finger protein 406 71.9 1.9 6.6E-05 24.2 1.8 23 48-70 8-31 (36)
200 3uk3_C Zinc finger protein 217 71.8 1.4 4.9E-05 27.4 1.3 24 49-72 32-56 (57)
201 2eoh_A Zinc finger protein 28 71.7 2.7 9.2E-05 25.2 2.5 32 49-82 12-44 (46)
202 1rik_A E6APC1 peptide; E6-bind 71.6 1.7 5.7E-05 22.9 1.4 20 50-69 3-23 (29)
203 2yuc_A TNF receptor-associated 71.3 2.5 8.7E-05 29.2 2.6 47 48-96 15-63 (76)
204 2kvh_A Zinc finger and BTB dom 71.2 2 6.7E-05 22.6 1.6 21 49-69 3-24 (27)
205 2eq3_A Zinc finger protein 347 71.1 2.6 8.9E-05 25.1 2.3 32 49-82 12-44 (46)
206 2yte_A Zinc finger protein 473 71.0 3.3 0.00011 24.0 2.8 25 49-74 10-35 (42)
207 2m0e_A Zinc finger and BTB dom 70.6 1.9 6.5E-05 22.4 1.4 21 49-69 2-23 (29)
208 2ecy_A TNF receptor-associated 70.2 0.88 3E-05 30.5 -0.1 43 48-90 14-62 (66)
209 2lcq_A Putative toxin VAPC6; P 70.2 1.2 4.2E-05 35.6 0.8 28 48-88 131-158 (165)
210 2elx_A Zinc finger protein 406 70.2 2.1 7.3E-05 23.7 1.6 22 49-70 7-29 (35)
211 2kvf_A Zinc finger and BTB dom 70.1 2.6 9E-05 22.1 2.0 21 49-69 3-24 (28)
212 2emb_A Zinc finger protein 473 70.0 4 0.00014 24.1 3.0 24 49-73 12-36 (44)
213 1iym_A EL5; ring-H2 finger, ub 70.0 0.67 2.3E-05 29.7 -0.7 40 49-88 5-53 (55)
214 2yto_A Zinc finger protein 484 70.0 2.2 7.6E-05 25.6 1.8 32 49-82 12-44 (46)
215 3fl2_A E3 ubiquitin-protein li 69.7 0.48 1.6E-05 35.9 -1.7 41 48-89 51-98 (124)
216 2drp_A Protein (tramtrack DNA- 69.5 1.8 6.1E-05 27.9 1.4 26 48-73 39-65 (66)
217 1srk_A Zinc finger protein ZFP 68.9 2.9 9.8E-05 23.2 2.0 23 48-70 6-29 (35)
218 2emz_A ZFP-95, zinc finger pro 68.8 1.7 5.7E-05 26.2 1.0 32 49-82 12-44 (46)
219 2elm_A Zinc finger protein 406 67.2 2.3 7.9E-05 24.4 1.4 25 49-73 9-34 (37)
220 2elq_A Zinc finger protein 406 66.8 2.7 9.1E-05 23.6 1.6 23 48-70 8-31 (36)
221 2eoj_A Zinc finger protein 268 66.8 3.5 0.00012 24.2 2.2 25 49-74 12-37 (44)
222 3htk_C E3 SUMO-protein ligase 66.7 1.2 4.3E-05 39.6 0.1 42 48-89 180-231 (267)
223 2elt_A Zinc finger protein 406 66.2 2.8 9.7E-05 23.4 1.6 21 49-69 9-30 (36)
224 2lvr_A Zinc finger and BTB dom 69.5 1.2 4.2E-05 23.6 0.0 21 49-69 3-24 (30)
225 2elv_A Zinc finger protein 406 65.6 4.1 0.00014 22.8 2.3 23 48-70 8-31 (36)
226 2kvg_A Zinc finger and BTB dom 65.2 2.4 8.3E-05 22.4 1.1 21 49-69 3-24 (27)
227 1bbo_A Human enhancer-binding 65.2 3.1 0.00011 25.8 1.8 24 49-72 29-53 (57)
228 2ytb_A Zinc finger protein 32; 65.0 4.4 0.00015 23.4 2.4 25 49-74 11-36 (42)
229 2ct2_A Tripartite motif protei 64.8 3.7 0.00013 28.4 2.4 43 48-90 14-68 (88)
230 2elo_A Zinc finger protein 406 64.7 2 6.7E-05 24.3 0.7 22 49-70 9-31 (37)
231 1jm7_B BARD1, BRCA1-associated 64.5 1.6 5.4E-05 32.8 0.3 42 48-89 21-66 (117)
232 2d8t_A Dactylidin, ring finger 64.1 2.3 7.9E-05 28.8 1.1 46 48-93 14-64 (71)
233 2elr_A Zinc finger protein 406 64.0 3.7 0.00013 22.8 1.8 22 48-69 8-30 (36)
234 2ea5_A Cell growth regulator w 63.7 1.3 4.5E-05 30.6 -0.2 41 48-89 14-57 (68)
235 2ct5_A Zinc finger BED domain 63.7 1.6 5.3E-05 31.6 0.2 16 90-105 46-61 (73)
236 1rim_A E6APC2 peptide; E6-bind 63.0 3.9 0.00013 22.9 1.8 20 50-69 3-23 (33)
237 3jyw_9 60S ribosomal protein L 62.8 2 7E-05 31.2 0.6 10 48-57 25-34 (72)
238 2yu5_A Zinc finger protein 473 62.7 4.1 0.00014 24.0 2.0 22 49-70 12-34 (44)
239 2yuc_A TNF receptor-associated 62.7 5.4 0.00019 27.4 2.9 31 49-82 44-74 (76)
240 2y43_A E3 ubiquitin-protein li 62.6 1.1 3.9E-05 32.3 -0.8 43 48-90 21-69 (99)
241 2i5o_A DNA polymerase ETA; zin 62.5 2.9 9.8E-05 26.9 1.2 22 48-69 8-29 (39)
242 2lvt_A Zinc finger and BTB dom 66.5 1.6 5.4E-05 23.2 0.0 21 49-69 2-23 (29)
243 2l0b_A E3 ubiquitin-protein li 62.3 1 3.5E-05 32.5 -1.1 42 48-89 39-88 (91)
244 2eou_A Zinc finger protein 473 62.0 5.1 0.00017 23.6 2.3 22 49-70 12-34 (44)
245 1x5w_A Zinc finger protein 64, 62.0 3 0.0001 27.2 1.4 26 49-74 37-63 (70)
246 2lvu_A Zinc finger and BTB dom 65.9 1.7 5.7E-05 22.6 0.0 21 49-69 2-23 (26)
247 1vq8_Z 50S ribosomal protein L 61.8 2.3 8E-05 31.4 0.8 27 48-87 26-54 (83)
248 3j21_i 50S ribosomal protein L 61.7 2.1 7.3E-05 31.8 0.6 10 48-57 34-43 (83)
249 2ept_A Zinc finger protein 32; 61.5 5 0.00017 23.2 2.2 25 49-74 10-35 (41)
250 4a17_Y RPL37A, 60S ribosomal p 61.2 2.5 8.5E-05 32.7 0.9 12 48-59 35-47 (103)
251 3iz5_m 60S ribosomal protein L 60.6 2.4 8.1E-05 32.2 0.7 10 48-57 35-44 (92)
252 2ckl_A Polycomb group ring fin 59.8 1.5 5.2E-05 32.3 -0.5 41 48-90 14-62 (108)
253 3izc_m 60S ribosomal protein R 59.8 2.3 8E-05 32.2 0.5 12 48-59 35-47 (92)
254 2e72_A POGO transposable eleme 59.6 4.7 0.00016 27.3 1.9 22 48-69 11-33 (49)
255 1ffk_W Ribosomal protein L37AE 59.5 2.7 9.2E-05 30.5 0.8 13 48-60 26-39 (73)
256 1njq_A Superman protein; zinc- 59.3 5.1 0.00017 23.0 1.9 25 49-74 6-31 (39)
257 2l7x_A Envelope glycoprotein; 59.1 3.3 0.00011 30.2 1.2 21 49-69 30-50 (77)
258 3l11_A E3 ubiquitin-protein li 58.7 2.8 9.7E-05 31.0 0.8 42 48-90 14-62 (115)
259 1jm7_A BRCA1, breast cancer ty 58.1 1.2 4.2E-05 32.5 -1.3 43 48-90 20-70 (112)
260 1e8j_A Rubredoxin; iron-sulfur 58.1 6.4 0.00022 26.5 2.4 12 49-60 3-14 (52)
261 3mkr_B Coatomer subunit alpha; 58.0 2.9 0.0001 38.0 1.0 35 47-94 276-311 (320)
262 2kfq_A FP1; protein, de novo p 57.8 5 0.00017 22.2 1.6 24 50-74 3-27 (32)
263 3mv2_A Coatomer subunit alpha; 57.6 3.6 0.00012 37.5 1.5 35 46-93 284-319 (325)
264 2epv_A Zinc finger protein 268 57.4 6 0.00021 23.4 2.1 25 49-74 12-37 (44)
265 2ep4_A Ring finger protein 24; 57.4 1.1 3.8E-05 30.5 -1.5 42 48-89 14-63 (74)
266 2eos_A B-cell lymphoma 6 prote 57.1 6.5 0.00022 22.8 2.2 26 48-74 10-36 (42)
267 2djb_A Polycomb group ring fin 57.1 0.73 2.5E-05 31.5 -2.5 42 48-89 14-61 (72)
268 1yuz_A Nigerythrin; rubrythrin 56.8 4.3 0.00015 34.0 1.7 25 48-86 170-194 (202)
269 2ea6_A Ring finger protein 4; 56.7 1.6 5.6E-05 28.8 -0.7 41 48-88 14-66 (69)
270 3cc2_Z 50S ribosomal protein L 56.6 3.2 0.00011 32.7 0.8 29 48-88 59-88 (116)
271 2en2_A B-cell lymphoma 6 prote 55.5 6 0.00021 22.9 1.8 24 49-73 11-35 (42)
272 1v87_A Deltex protein 2; ring- 54.9 0.96 3.3E-05 33.5 -2.4 12 50-61 26-37 (114)
273 3lrq_A E3 ubiquitin-protein li 54.8 1.1 3.8E-05 32.8 -2.0 42 48-89 21-69 (100)
274 1wim_A KIAA0161 protein; ring 54.8 2.2 7.5E-05 30.7 -0.4 49 48-96 4-72 (94)
275 2ckl_B Ubiquitin ligase protei 54.2 1.2 4E-05 35.4 -2.1 42 48-89 53-101 (165)
276 1x6e_A Zinc finger protein 24; 54.1 4.9 0.00017 26.4 1.4 22 49-70 42-64 (72)
277 2kn9_A Rubredoxin; metalloprot 53.5 6 0.00021 29.2 1.8 39 48-86 26-68 (81)
278 1z6u_A NP95-like ring finger p 53.3 2.4 8.3E-05 33.6 -0.4 42 48-90 77-125 (150)
279 2ghf_A ZHX1, zinc fingers and 52.7 4 0.00014 30.3 0.8 38 48-86 49-87 (102)
280 4rxn_A Rubredoxin; electron tr 52.6 6.6 0.00022 26.8 1.8 9 49-57 3-11 (54)
281 1dx8_A Rubredoxin; electron tr 52.6 5.4 0.00019 28.5 1.4 13 48-60 6-18 (70)
282 3flo_B DNA polymerase alpha ca 52.4 3 0.0001 35.5 0.0 39 48-89 21-60 (206)
283 2cot_A Zinc finger protein 435 52.3 7.9 0.00027 25.6 2.2 25 49-74 46-71 (77)
284 2epc_A Zinc finger protein 32; 51.8 7.1 0.00024 22.5 1.7 26 48-74 10-36 (42)
285 2d9k_A FLN29 gene product; zin 51.6 4.3 0.00015 27.9 0.8 22 48-69 42-63 (75)
286 3ng2_A RNF4, snurf, ring finge 51.4 1.2 3.9E-05 29.9 -2.2 42 48-89 9-62 (71)
287 2jvx_A NF-kappa-B essential mo 51.1 6.8 0.00023 23.5 1.5 22 48-69 2-24 (28)
288 2en3_A ZFP-95, zinc finger pro 50.9 6.1 0.00021 23.4 1.3 32 49-82 12-44 (46)
289 4gzn_C ZFP-57, zinc finger pro 50.5 9.7 0.00033 25.4 2.4 26 49-75 32-58 (60)
290 2xeu_A Ring finger protein 4; 50.3 0.99 3.4E-05 29.5 -2.7 43 48-90 2-56 (64)
291 4ic3_A E3 ubiquitin-protein li 50.1 3.5 0.00012 28.5 0.1 41 48-89 23-66 (74)
292 2kdx_A HYPA, hydrogenase/ureas 50.0 6.3 0.00022 30.0 1.6 27 48-87 72-99 (119)
293 2v3b_B Rubredoxin 2, rubredoxi 49.8 5.8 0.0002 27.0 1.2 9 49-57 3-11 (55)
294 2epp_A POZ-, at HOOK-, and zin 49.6 9.9 0.00034 26.2 2.4 35 49-86 13-48 (66)
295 2gqj_A Zinc finger protein KIA 49.4 5.8 0.0002 28.0 1.2 26 49-74 54-80 (98)
296 1yui_A GAGA-factor; complex (D 49.1 8.2 0.00028 24.0 1.8 23 48-70 23-46 (54)
297 4ayc_A E3 ubiquitin-protein li 47.7 2.4 8.3E-05 32.7 -1.2 42 48-89 52-98 (138)
298 2qgp_A HNH endonuclease; Q39X4 47.0 4.2 0.00014 30.9 0.1 22 48-69 34-56 (112)
299 2czr_A TBP-interacting protein 46.9 6.4 0.00022 33.7 1.2 28 44-74 151-178 (226)
300 1sp2_A SP1F2; zinc finger, tra 44.9 15 0.00053 19.4 2.3 21 50-70 3-26 (31)
301 3h0g_L DNA-directed RNA polyme 42.5 12 0.0004 26.4 1.8 29 48-88 20-48 (63)
302 1rmd_A RAG1; V(D)J recombinati 42.1 5.2 0.00018 29.6 -0.1 45 44-90 20-70 (116)
303 2eox_A Zinc finger protein 473 41.8 7 0.00024 22.9 0.5 23 48-70 11-34 (44)
304 1l8d_A DNA double-strand break 41.4 7.2 0.00025 29.0 0.6 12 50-61 48-59 (112)
305 1x4j_A Ring finger protein 38; 41.2 2.8 9.5E-05 28.7 -1.6 42 48-89 22-71 (75)
306 4ap4_A E3 ubiquitin ligase RNF 40.9 9.8 0.00034 27.9 1.3 37 48-89 47-83 (133)
307 3sp4_A Aprataxin-like protein; 39.2 11 0.00037 32.1 1.5 24 48-71 168-193 (204)
308 2ctd_A Zinc finger protein 512 39.1 15 0.0005 26.2 2.0 26 49-74 62-88 (96)
309 3hcs_A TNF receptor-associated 38.9 22 0.00076 27.8 3.2 48 49-98 110-158 (170)
310 1pft_A TFIIB, PFTFIIBN; N-term 38.7 5.7 0.00019 25.8 -0.3 35 48-93 4-39 (50)
311 3t6p_A Baculoviral IAP repeat- 38.6 7.2 0.00025 35.3 0.3 41 48-89 294-337 (345)
312 2wbt_A B-129; zinc finger; 2.7 38.1 16 0.00056 26.4 2.1 25 49-73 100-125 (129)
313 3pih_A Uvrabc system protein A 37.6 14 0.00046 37.8 2.1 34 48-86 248-281 (916)
314 1zfd_A SWI5; DNA binding motif 36.5 20 0.0007 19.0 1.9 22 49-70 3-27 (32)
315 3vhs_A ATPase wrnip1; zinc fin 36.1 15 0.00052 21.8 1.3 19 78-96 6-25 (29)
316 4ayb_P DNA-directed RNA polyme 36.1 12 0.0004 25.2 0.9 31 49-88 3-33 (48)
317 3hct_A TNF receptor-associated 36.1 6.1 0.00021 29.5 -0.5 42 48-89 17-64 (118)
318 2a25_A Ubiquitin ligase SIAH1; 36.0 12 0.0004 30.9 1.2 50 49-102 6-65 (193)
319 1fv5_A First zinc finger of U- 35.9 13 0.00045 22.5 1.1 21 48-68 7-28 (36)
320 3h0l_B Aspartyl/glutamyl-tRNA( 35.4 13 0.00044 35.5 1.5 22 68-89 27-48 (478)
321 2eln_A Zinc finger protein 406 35.2 19 0.00064 21.8 1.7 21 49-69 9-32 (38)
322 2ecg_A Baculoviral IAP repeat- 35.1 6.8 0.00023 27.0 -0.4 41 48-89 24-67 (75)
323 2ecn_A Ring finger protein 141 35.0 6 0.00021 26.4 -0.7 42 48-89 14-59 (70)
324 3a43_A HYPD, hydrogenase nicke 35.0 13 0.00044 29.4 1.2 16 48-63 69-84 (139)
325 2akl_A PHNA-like protein PA012 34.8 14 0.00046 29.9 1.3 26 49-86 27-52 (138)
326 3al0_B Aspartyl/glutamyl-tRNA( 34.7 14 0.00046 35.4 1.5 17 73-89 31-47 (482)
327 1wir_A Protein arginine N-meth 34.6 14 0.00049 28.9 1.4 31 74-104 11-43 (121)
328 2ecm_A Ring finger and CHY zin 34.5 4.4 0.00015 25.6 -1.4 41 48-88 4-53 (55)
329 2yho_A E3 ubiquitin-protein li 34.1 5.1 0.00017 28.3 -1.2 42 48-90 17-61 (79)
330 2ab3_A ZNF29; zinc finger prot 33.8 17 0.00059 18.5 1.3 21 49-69 2-25 (29)
331 1va1_A Transcription factor SP 33.6 22 0.00074 20.0 1.8 22 48-69 7-31 (37)
332 3ip4_B Aspartyl/glutamyl-tRNA( 33.5 14 0.00049 35.2 1.5 22 68-89 25-46 (483)
333 2lo3_A SAGA-associated factor 31.5 14 0.00048 24.3 0.7 26 49-75 17-42 (44)
334 1dl6_A Transcription factor II 31.4 11 0.00039 25.5 0.3 36 48-94 10-46 (58)
335 2djr_A Zinc finger BED domain- 31.2 14 0.00048 26.7 0.7 16 90-105 49-64 (76)
336 4a0k_B E3 ubiquitin-protein li 30.9 10 0.00035 29.2 0.0 38 50-87 49-109 (117)
337 3dpl_R Ring-box protein 1; ubi 30.2 5.2 0.00018 30.2 -1.8 37 51-87 39-98 (106)
338 2ecl_A Ring-box protein 2; RNF 29.5 4.4 0.00015 28.5 -2.2 10 79-88 65-74 (81)
339 3kfu_F Aspartyl/glutamyl-tRNA( 29.4 18 0.00063 34.4 1.4 17 73-89 30-46 (466)
340 1bhi_A CRE-BP1, ATF-2; CRE bin 29.2 29 0.00099 19.2 1.8 21 49-69 6-29 (38)
341 2hf1_A Tetraacyldisaccharide-1 29.1 16 0.00055 25.8 0.7 28 48-86 7-34 (68)
342 1x3c_A Zinc finger protein 292 28.9 29 0.00098 25.1 2.1 28 49-76 27-57 (73)
343 2r6f_A Excinuclease ABC subuni 28.5 19 0.00065 37.2 1.4 34 48-86 266-299 (972)
344 3knv_A TNF receptor-associated 28.2 6.3 0.00022 30.9 -1.7 40 48-88 30-76 (141)
345 1yk4_A Rubredoxin, RD; electro 28.2 21 0.0007 23.9 1.1 10 48-57 34-43 (52)
346 2jr6_A UPF0434 protein NMA0874 28.2 17 0.00057 25.7 0.7 28 48-86 7-34 (68)
347 2jz8_A Uncharacterized protein 27.5 17 0.0006 27.2 0.7 15 49-63 48-62 (87)
348 2pk7_A Uncharacterized protein 27.3 19 0.00065 25.5 0.9 28 48-86 7-34 (69)
349 2gmg_A Hypothetical protein PF 27.0 35 0.0012 26.3 2.4 27 48-86 66-92 (105)
350 1chc_A Equine herpes virus-1 r 26.5 9.6 0.00033 25.1 -0.8 41 49-89 5-51 (68)
351 2jvm_A Uncharacterized protein 26.0 19 0.00064 26.6 0.6 14 49-62 53-66 (80)
352 2js4_A UPF0434 protein BB2007; 25.8 18 0.00063 25.6 0.6 28 48-86 7-34 (70)
353 2jny_A Uncharacterized BCR; st 25.0 29 0.00098 24.5 1.4 30 44-86 7-36 (67)
354 3bhp_A UPF0291 protein YNZC; N 24.9 55 0.0019 22.8 2.8 21 197-217 20-41 (60)
355 2bai_A Genome polyprotein; zin 24.4 8.9 0.0003 23.6 -1.1 9 79-87 17-25 (32)
356 2jne_A Hypothetical protein YF 24.4 11 0.00039 28.9 -0.8 54 50-107 33-93 (101)
357 2ygr_A Uvrabc system protein A 24.2 32 0.0011 35.6 2.2 34 48-86 274-308 (993)
358 4dvc_A Thiol:disulfide interch 22.9 8.5 0.00029 29.4 -1.9 10 48-57 29-38 (184)
359 2jrr_A Uncharacterized protein 22.6 24 0.00083 25.1 0.7 11 49-59 40-50 (67)
360 2fiy_A Protein FDHE homolog; F 21.9 17 0.00059 32.5 -0.3 10 48-57 181-190 (309)
361 1x6f_A Zinc finger protein 462 21.6 40 0.0014 23.8 1.7 50 49-102 25-75 (88)
362 2gag_D Heterotetrameric sarcos 21.3 20 0.00069 27.4 0.0 15 49-64 3-17 (99)
363 3mwm_A ZUR, putative metal upt 21.2 32 0.0011 26.5 1.1 40 48-87 86-136 (139)
364 2yu4_A E3 SUMO-protein ligase 20.8 55 0.0019 23.3 2.3 39 48-87 6-59 (94)
365 3mhs_C SAGA-associated factor 20.5 34 0.0012 26.1 1.2 22 48-69 69-90 (99)
366 2l8e_A Polyhomeotic-like prote 20.4 63 0.0021 21.4 2.3 14 48-61 17-30 (49)
367 3eyy_A Putative iron uptake re 20.3 24 0.00083 27.4 0.3 41 47-87 88-139 (145)
368 1ncs_A Peptide M30F, transcrip 20.1 31 0.0011 20.6 0.7 21 49-69 18-41 (47)
369 1s24_A Rubredoxin 2; electron 20.1 33 0.0011 25.5 1.0 10 48-57 67-76 (87)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.30 E-value=0.00015 Score=48.33 Aligned_cols=54 Identities=28% Similarity=0.604 Sum_probs=44.4
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|+.|+..| ....|..|....|....+.-.|++|...-. .++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 469999999955 578899999987866677889999987543 689999988886
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.29 E-value=0.00016 Score=49.81 Aligned_cols=54 Identities=26% Similarity=0.415 Sum_probs=44.8
Q ss_pred eeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 49 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 49 ~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
.|.|++|+. =.....|..|+...|..+.+.-.|++|...-. .++..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 599999999 45678899999888887767889999987543 6899999988865
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.66 E-value=0.0009 Score=43.03 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=38.3
Q ss_pred ceeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++|+.. -....|..|+.. |.. .+.-.|++|...-. .++..|+...|+
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CCccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 46999999994 567789999885 433 35578999987533 689999988774
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.60 E-value=0.0018 Score=45.65 Aligned_cols=51 Identities=31% Similarity=0.541 Sum_probs=28.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|+
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 46677776633 45566666653 322 23456777755332 466666665554
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.47 E-value=0.0018 Score=43.61 Aligned_cols=53 Identities=21% Similarity=0.335 Sum_probs=41.0
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 359999999954 57789999986 544 35579999987543 6899999887764
No 6
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.41 E-value=0.0025 Score=43.94 Aligned_cols=54 Identities=24% Similarity=0.356 Sum_probs=42.2
Q ss_pred eeeCCCCCC-CccHHHhhhhhcccCCCC--CCcccCCccccccc--hhhHhhhhccccc
Q 027149 49 EYPCPFCSE-DFDLVGLCCHIDEEHPVE--AKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 49 ~F~CPfC~e-~~d~~~L~~H~~~eH~~e--~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
.|.|++|+. =.....|..|+...|... .+.-.|++|..... .+|..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 599999999 446678999998777654 36689999987543 6899999877764
No 7
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.41 E-value=0.0021 Score=43.16 Aligned_cols=48 Identities=21% Similarity=0.518 Sum_probs=38.9
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCC-cccccc--chhhHhhhhc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCP-VCVTRV--TMDMVDHITT 98 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCP-VC~~~~--~~d~i~Hl~~ 98 (227)
-.|.|++|+..|....|..|... ...+...|+ +|...- ..++..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 36999999998888899999876 556788999 997753 3588899865
No 8
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.31 E-value=0.0038 Score=40.00 Aligned_cols=50 Identities=20% Similarity=0.352 Sum_probs=38.1
Q ss_pred eeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 50 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 50 F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 8999999955 67789999875 543 45678999987543 689999876654
No 9
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.16 E-value=0.005 Score=39.90 Aligned_cols=51 Identities=24% Similarity=0.436 Sum_probs=38.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 48999999955 57889999875 543 35678999987543 588999865564
No 10
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.14 E-value=0.0035 Score=46.07 Aligned_cols=51 Identities=22% Similarity=0.416 Sum_probs=40.2
Q ss_pred ceeeCCCCCCCc--cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~--d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|+.|++.| ....|..|+.. | ..+.-.|++|...-. .+|..|++..|.
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 359999999988 78999999874 5 457789999987543 688999555564
No 11
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.03 E-value=0.004 Score=42.22 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=38.8
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CCccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 359999999954 67789999875 433 45679999987543 588899876553
No 12
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.01 E-value=0.00093 Score=48.59 Aligned_cols=54 Identities=24% Similarity=0.371 Sum_probs=41.6
Q ss_pred ceeeCCCCCCCc--cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e~~--d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.|++|+..| ....|..|+.. |....+.-.|++|...-. .+|..|+...|+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 359999999977 57899999875 433245679999987543 6899999887764
No 13
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.89 E-value=0.0088 Score=40.87 Aligned_cols=52 Identities=23% Similarity=0.438 Sum_probs=39.4
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 369999999955 57789999874 543 35679999987543 689999876554
No 14
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.75 E-value=0.0076 Score=42.36 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=28.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 100 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH 100 (227)
.|.|++|+..| ....|..|+...+ . .+.-.|++|..... .++..|+...+
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~ 60 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRCHT-G-VKPYKCKTCDYAAADSSSLNKHLRIHS 60 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGGCC-C-CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred CeECCCCCCccCCHHHHHHHHHhcC-C-CCCEeCCCCCCccCCHHHHHHHHHHhC
Confidence 47777777744 4556667766332 2 23456777765432 46666766544
No 15
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.59 E-value=0.0092 Score=44.55 Aligned_cols=51 Identities=33% Similarity=0.675 Sum_probs=39.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 103 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~~ 103 (227)
.|.|++|+..| ....|..|+.. | .+.-.|++|...-. .++..|+...|+..
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence 59999999955 56779999875 5 45568999987543 68999998888753
No 16
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.54 E-value=0.011 Score=43.16 Aligned_cols=53 Identities=23% Similarity=0.461 Sum_probs=34.3
Q ss_pred eeeCCCCCC-CccHHHhhhhhcccCC-CCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 49 EYPCPFCSE-DFDLVGLCCHIDEEHP-VEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e-~~d~~~L~~H~~~eH~-~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|++|+. -.....|..|+...|. ...+...|++|...-. .++..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 478888888 4466777788776542 2345567888866433 577777765544
No 17
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.44 E-value=0.017 Score=41.33 Aligned_cols=52 Identities=21% Similarity=0.442 Sum_probs=36.2
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++|+..| ....|..|+...+. .+...|++|..... .++..|+...++
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 458899998855 56778888875432 34578999977543 578888776554
No 18
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.38 E-value=0.0035 Score=44.24 Aligned_cols=47 Identities=21% Similarity=0.383 Sum_probs=38.9
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccccccc-hhhHhhhhc
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHITT 98 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~-~d~i~Hl~~ 98 (227)
.|.|+||+..|....|-.|. .|+ ..+.+.||.|...+. .+|..|+..
T Consensus 17 ~~~C~~C~~~~~~~~L~~H~--~~c-~~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 17 LAVCQHCDLELSILKLKEHE--DYC-GARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CEECSSSCCEECHHHHHHHH--HHH-HHCEEECSSSCCEEETTGGGTHHHH
T ss_pred ccCCcccChHhhHHHHHHHH--hHc-CCCceEcccCCCcCcHHHHHHHHHH
Confidence 69999999999999999997 464 456789999987654 688888865
No 19
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.38 E-value=0.0052 Score=42.06 Aligned_cols=56 Identities=18% Similarity=0.295 Sum_probs=41.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCC-CCCcccCCccccccc--hhhHhhhhcccccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPV-EAKSGVCPVCVTRVT--MDMVDHITTQHGNI 103 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~-e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~~ 103 (227)
-.|.|++|+..| ....|..|+...+.. ..+.-.|++|...-. .+|..|+...|...
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 359999999955 567899998754321 246679999987543 68999998778654
No 20
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.35 E-value=0.0096 Score=41.20 Aligned_cols=48 Identities=21% Similarity=0.378 Sum_probs=22.4
Q ss_pred eeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcc
Q 027149 50 YPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQ 99 (227)
Q Consensus 50 F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~q 99 (227)
|.|++|+. --....|..|+.. |.. .+.-.|++|...-. .++..|+...
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 85 (90)
T 1a1h_A 35 FQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIH 85 (90)
T ss_dssp EECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred ccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHh
Confidence 55666655 2334455555542 221 23345555554322 3555555443
No 21
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.35 E-value=0.0072 Score=41.02 Aligned_cols=49 Identities=22% Similarity=0.529 Sum_probs=24.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQ 99 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~q 99 (227)
.|.|++|+..| ....|..|+...+ . .+.-.|++|...-. .++..|+...
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHT-G-EKPHKCQVCGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHH-T-CCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhc-C-CCCCcCCCcchhhCChHHHHHHHHhh
Confidence 36666666633 4455556655322 1 23355666654322 3555555443
No 22
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.33 E-value=0.014 Score=42.67 Aligned_cols=53 Identities=23% Similarity=0.324 Sum_probs=40.9
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.||+|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|..
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL-LHA-AQVFPCKYCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT-TSC-SSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh-ccC-CCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence 469999999965 56789999885 443 45679999987543 6899999777753
No 23
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.29 E-value=0.015 Score=40.74 Aligned_cols=53 Identities=21% Similarity=0.419 Sum_probs=40.0
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.|++|+. -.....|..|+.. |.. .+.-.|++|...-. .+|..|+...|+.
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3599999999 4467889999985 433 35678999987543 6899999876653
No 24
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=95.27 E-value=0.015 Score=44.51 Aligned_cols=54 Identities=24% Similarity=0.429 Sum_probs=41.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCc-------ccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKS-------GVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~-------vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|+|+.|+..| ....|..|+...|..+... -.|++|..... .++..|+...++
T Consensus 24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 469999999955 6788999999888875432 47999987543 588999886554
No 25
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.26 E-value=0.015 Score=40.77 Aligned_cols=54 Identities=24% Similarity=0.429 Sum_probs=40.0
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCc-------ccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKS-------GVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~-------vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|+|+.|+..| ....|..|+...|..+... -.|++|..... .+|..|+...++
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 358899999955 5778999998767765321 68999987543 688999876443
No 26
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.22 E-value=0.012 Score=42.94 Aligned_cols=53 Identities=21% Similarity=0.394 Sum_probs=40.5
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.|++|+. =-....|..|+.. |.. .+.-.|++|...-. .+|..|+...|+.
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVS-HTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HSS-SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 4699999999 4567789999975 433 35678999987543 6899999877754
No 27
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.21 E-value=0.012 Score=39.86 Aligned_cols=52 Identities=23% Similarity=0.450 Sum_probs=38.9
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 469999999965 57789999875 443 35578999987543 688999876554
No 28
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.05 E-value=0.015 Score=40.74 Aligned_cols=55 Identities=20% Similarity=0.385 Sum_probs=42.6
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.|++|+. --....|..|+...|....+.-.|++|...-. .+|..|+...|+.
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence 3599999999 44678899999866554457889999987543 5899999766753
No 29
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.98 E-value=0.012 Score=42.56 Aligned_cols=51 Identities=24% Similarity=0.410 Sum_probs=25.1
Q ss_pred eeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 50 YPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 50 F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
|.|++|+.. -....|..|+.. |.. .+.-.|++|...-. .+|..|+...|..
T Consensus 38 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 38 YGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp EECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence 666666662 234555566543 222 23345666654322 4556665554443
No 30
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.93 E-value=0.025 Score=40.45 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=39.1
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 359999999955 67889999875 433 35578999987543 589999876554
No 31
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=94.88 E-value=0.011 Score=40.01 Aligned_cols=50 Identities=24% Similarity=0.496 Sum_probs=38.0
Q ss_pred eeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 50 YPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 50 F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
|.|+.|+.. -....|..|+.. |. ..+...|++|..... .++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI-HS-DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HH-TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHH-cC-CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 899999994 467889999985 33 345678999987543 688999876554
No 32
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=94.40 E-value=0.017 Score=43.24 Aligned_cols=48 Identities=27% Similarity=0.600 Sum_probs=33.2
Q ss_pred ccccccCCcchhhhccCcceeeCCCCCC--CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 30 CIDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 30 ~~g~e~~~~ddd~e~r~~~~F~CPfC~e--~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
.+.+||++-|++++.+ .|+|| ||. .+....|... .-.+.||-|+-.+.
T Consensus 14 ev~LeDm~~de~~~~y---~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 14 EVEIEDFQYDEDSETY---FYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EEEGGGSCCBTTTTEE---EECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EEEHHHceEccCCCEE---EEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 4457788776654333 89999 999 5666667432 13688999998664
No 33
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.25 E-value=0.036 Score=33.89 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=27.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+...|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 59999999955 5677889987567544 56789988
No 34
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=94.20 E-value=0.016 Score=43.91 Aligned_cols=48 Identities=27% Similarity=0.605 Sum_probs=33.2
Q ss_pred ccccccCCcchhhhccCcceeeCCCCCC--CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 30 CIDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 30 ~~g~e~~~~ddd~e~r~~~~F~CPfC~e--~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
.+.+||++-|++++.+ .|+|| ||. .++...|... .-.+.||-|+-.+.
T Consensus 7 eV~LeDm~~de~~~~y---~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 7 EVEIEDFQYDEDSETY---FYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp EEETTTSEEETTTTEE---EEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred EEEHHHcEEcCCCCEE---EEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 3457777766553343 89999 999 6666777532 13688999998764
No 35
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.16 E-value=0.046 Score=33.45 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=26.4
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNSHLARHRG-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHGG-GTSCC-CCCSCCCC
T ss_pred cCeECCCCCCeeCCHHHHHHHhh-hcCCC-CCCCCCCC
Confidence 359999999954 5677889976 46544 66789998
No 36
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=94.10 E-value=0.033 Score=38.07 Aligned_cols=48 Identities=25% Similarity=0.575 Sum_probs=37.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 98 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~ 98 (227)
-|.|+.|+..| ....|..|.. .|.. .+.-.|++|...-. .+|..|+.+
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~-~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRR-AHLG-YRPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHH-HHHT-CCCEECTTTCCEESSHHHHHHHGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHH-HhCC-CcCeECCCCCCCcCCHHHHHHHhCc
Confidence 49999999965 5678999987 4654 46679999988543 689999875
No 37
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.05 E-value=0.041 Score=33.69 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=26.6
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQL-IHTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHT-TTCCC-CCSCCSCC
T ss_pred CCeECCCCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 359999999944 5677888976 46544 56789998
No 38
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.93 E-value=0.03 Score=40.42 Aligned_cols=45 Identities=24% Similarity=0.502 Sum_probs=33.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhh
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHIT 97 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~ 97 (227)
.|.|++|+..| ....|..|+.. | .+.-.|++|..... .++..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 58899999844 56778888875 4 25678999977543 57888874
No 39
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=93.79 E-value=0.052 Score=33.21 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=26.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 59999999954 56778899875 644 356789998
No 40
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.75 E-value=0.054 Score=33.03 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=26.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999954 56788899874 654 356789998
No 41
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.74 E-value=0.0049 Score=43.27 Aligned_cols=51 Identities=25% Similarity=0.468 Sum_probs=32.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|+
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHI 56 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence 47788888744 55667777764 433 34467888866432 577777777775
No 42
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.67 E-value=0.025 Score=39.53 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=42.1
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 103 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~~ 103 (227)
..|.|++|+..| ....|..|+...|. ...+|+.|..... .++..||...|+..
T Consensus 30 ~~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~~ 85 (88)
T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKLV 85 (88)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 359999999954 67889999998883 6789999977543 58899998777653
No 43
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=93.66 E-value=0.044 Score=33.52 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=26.4
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ema_A 11 KRYKCNECGKVFSRNSQLSQHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTG-GGCC-CCCSSSCC
T ss_pred cCcCCCCCcchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 359999999954 56778889774 5543 56789998
No 44
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=93.56 E-value=0.066 Score=39.16 Aligned_cols=51 Identities=24% Similarity=0.491 Sum_probs=38.1
Q ss_pred ceeeCC--CCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCP--FCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CP--fC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|| .|+..| +...|..|+. .| ..+.-.|++|...-. .++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred CcccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 369999 899954 6778999987 45 556788999977543 688899876554
No 45
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.52 E-value=0.037 Score=40.21 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=33.2
Q ss_pred eeeCCCCCC-CccHHHhhhhhccc-CCCCCCcccCCcccccc----chhhHhhhhccc
Q 027149 49 EYPCPFCSE-DFDLVGLCCHIDEE-HPVEAKSGVCPVCVTRV----TMDMVDHITTQH 100 (227)
Q Consensus 49 ~F~CPfC~e-~~d~~~L~~H~~~e-H~~e~~~vvCPVC~~~~----~~d~i~Hl~~qH 100 (227)
.|.|+.|+. =.....|..|+... |..+.....|++|...- ..++..|+...+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 488999988 44567788888741 33333344588887532 256777776543
No 46
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.50 E-value=0.056 Score=33.04 Aligned_cols=34 Identities=26% Similarity=0.270 Sum_probs=26.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCCC-CCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCCC-CCCCCCCC
Confidence 59999999954 56778899874 6543 56789988
No 47
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.21 E-value=0.058 Score=34.60 Aligned_cols=39 Identities=31% Similarity=0.524 Sum_probs=30.1
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~ 87 (227)
..|.|++|+..| ....|..|+...|..+ +.-.|++|...
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~-k~~~C~~C~k~ 50 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSE-RPHKCQVWVSG 50 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCCC-CCCCSSSSCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC-CCccCCCCCCC
Confidence 359999999955 6778999987667654 56789999653
No 48
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.16 E-value=0.044 Score=41.58 Aligned_cols=51 Identities=25% Similarity=0.468 Sum_probs=36.8
Q ss_pred eeeCCC--CCC-CccHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhhcccc
Q 027149 49 EYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPf--C~e-~~d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|++ |+. =.....|..|+.. |.. .+.-.|++ |...-. .++..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 599997 999 4467789999875 433 35678998 977543 588999855553
No 49
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.16 E-value=0.069 Score=32.70 Aligned_cols=35 Identities=17% Similarity=0.027 Sum_probs=26.5
Q ss_pred ceeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 11 KSHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CCeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 35999999994 466789999864 644 356789998
No 50
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.13 E-value=0.068 Score=32.65 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=26.2
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQ-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TTSSC-CSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 5999999994 45678889987 56544 56789988
No 51
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=93.13 E-value=0.03 Score=41.85 Aligned_cols=48 Identities=29% Similarity=0.649 Sum_probs=32.5
Q ss_pred ccccccCCcchhhhccCcceeeCCCCCC--CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 30 CIDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 30 ~~g~e~~~~ddd~e~r~~~~F~CPfC~e--~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
.+.+||++-|++++.+ .|+|| ||. .++...|... --.+.||-|+-.+.
T Consensus 7 ev~leDm~~de~~~~y---~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 7 EIEIEDMTFEPENQMF---TYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp CCBGGGSEEETTTTEE---EEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred EEEHHHcEEcCCCCEE---EEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 3456777766553333 89999 998 6666677432 23688999998664
No 52
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=93.10 E-value=0.073 Score=32.39 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQR-SHTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGG-GSSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999944 5677889986 4654 356789998
No 53
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=93.02 E-value=0.077 Score=37.21 Aligned_cols=52 Identities=21% Similarity=0.405 Sum_probs=35.9
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCC--ccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCP--VC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++ |+..| ....|..|+.. |.. .+...|| +|..... .++..|+...++
T Consensus 14 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 14 RIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred cceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 4689998 99944 67788889875 432 3457886 5876433 578888876554
No 54
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.01 E-value=0.067 Score=32.68 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=25.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSM-VHTAE-KPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HTTCC-CSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 59999999955 5677888976 46543 56789988
No 55
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.01 E-value=0.079 Score=32.44 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=26.0
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456788899874 644 356789988
No 56
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=93.01 E-value=0.075 Score=32.33 Aligned_cols=34 Identities=26% Similarity=0.275 Sum_probs=25.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTSC-CCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCCC-CCCCCCCC
Confidence 59999999954 56788899764 5543 56789988
No 57
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.98 E-value=0.04 Score=39.75 Aligned_cols=50 Identities=22% Similarity=0.329 Sum_probs=38.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|++|+..| ....|..|+. |.. .+.-.|++|...-. .+|..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 59999999954 5778889984 654 45689999987543 689999975664
No 58
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.83 E-value=0.051 Score=33.22 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=26.2
Q ss_pred ceeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 11 NPYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred cCcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 35999999994 456788899875 544 356789988
No 59
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.83 E-value=0.069 Score=36.02 Aligned_cols=53 Identities=26% Similarity=0.468 Sum_probs=39.7
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++ |+..| ....|..|+...|.. .+.-.|++ |...-. .+|..|+...++
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 3588988 99955 678899999866755 35678998 987543 688999876543
No 60
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.80 E-value=0.092 Score=32.12 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=26.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGG-GTSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5678888987 4543 456789998
No 61
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.77 E-value=0.089 Score=31.99 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=25.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHT-TTTTC-SCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999954 5677889976 46543 56789988
No 62
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.75 E-value=0.067 Score=40.25 Aligned_cols=49 Identities=33% Similarity=0.534 Sum_probs=37.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCC--CCCCcccCCcccccc--chhhHhhh
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHP--VEAKSGVCPVCVTRV--TMDMVDHI 96 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~--~e~~~vvCPVC~~~~--~~d~i~Hl 96 (227)
..|.|++|+..| ....|..|+...|. ...+.-.|++|...- ..+|..|+
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHH
T ss_pred cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHH
Confidence 359999999955 56789999876675 345678999998754 36888994
No 63
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.68 E-value=0.075 Score=32.45 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=26.2
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. .....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQR-SHSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HSCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 5999999994 46678899976 4644 356789998
No 64
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.66 E-value=0.063 Score=32.71 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=26.0
Q ss_pred eeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+. =-....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQR-IHTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHG-GGSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 599999999 455677888986 46544 56789998
No 65
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.63 E-value=0.062 Score=32.72 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=25.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK-CHTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH-HHSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999955 5678889976 45543 56789988
No 66
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.58 E-value=0.078 Score=32.37 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQK-IHTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HTSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 59999999944 5677889986 4644 356789988
No 67
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.58 E-value=0.11 Score=31.74 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT-TTTTC-CCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 59999999955 4577889987 45443 56789988
No 68
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.56 E-value=0.057 Score=33.01 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=26.3
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+..| ....|..|.. .|.. .+.-.|+||
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~c 46 (46)
T 2ytk_A 11 KPYKCNECGKVFTQNSHLTNHWR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH-HHSS-SSCSSCCCC
T ss_pred CCEeCCcCCCccCCHHHHHHHHH-HHCC-CCCCCCCCC
Confidence 359999999954 5677888987 4543 356789998
No 69
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.56 E-value=0.066 Score=32.60 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVDD-KHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCSC-CCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCCC-CCCCCCCC
Confidence 59999999954 55788899874 6543 56789988
No 70
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=92.44 E-value=0.06 Score=42.54 Aligned_cols=51 Identities=29% Similarity=0.590 Sum_probs=35.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
.|.|++|+..| ....|..|+...+. .+.-.|++|...-. .++..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 58999999844 56778888875432 34567999977533 578888876554
No 71
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.42 E-value=0.047 Score=42.40 Aligned_cols=49 Identities=24% Similarity=0.335 Sum_probs=33.9
Q ss_pred ceeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhc
Q 027149 48 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 98 (227)
Q Consensus 48 ~~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~ 98 (227)
-.|.|+.|+.. -....|..|+. .|..+ +.-.|++|...-. .++..|+..
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSWE-KKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHCC-SCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCCC-CCeeCCccCeecccccchhhhccc
Confidence 35889999884 45677888876 46433 4567888876433 578888764
No 72
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.38 E-value=0.11 Score=31.64 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=25.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999944 5678899986 4544 355789988
No 73
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=92.34 E-value=0.073 Score=32.59 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999944 55778889864 544 356789988
No 74
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=92.32 E-value=0.065 Score=35.80 Aligned_cols=49 Identities=31% Similarity=0.591 Sum_probs=35.4
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 98 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~ 98 (227)
..|.||+ |+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 3599996 99944 66788999864 443 34578999987543 578888753
No 75
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.31 E-value=0.082 Score=32.16 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 59999999954 56778899764 544 356789988
No 76
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.27 E-value=0.11 Score=31.64 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=25.8
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456788899764 543 456789988
No 77
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=92.23 E-value=0.065 Score=36.87 Aligned_cols=52 Identities=29% Similarity=0.579 Sum_probs=38.0
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.||+ |+..| ....|..|+...+ . .+.-.|++|..... .++..|+...++
T Consensus 3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 3 RPYACPVESCDRRFSQSGSLTRHIRIHT-G-QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHH-C-CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CceECCCCCCCCccCCHHHHHHHHHHhC-C-CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 3599995 99955 5778999987433 2 35579999987543 688999876554
No 78
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.20 E-value=0.1 Score=31.80 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQR-VHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGG-GGSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 59999999954 4577889976 4544 356789988
No 79
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.06 E-value=0.11 Score=31.58 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=26.1
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 5999999994 45678889976 4654 356789988
No 80
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.90 E-value=0.13 Score=31.37 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999955 5677889977 4543 356789988
No 81
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=91.86 E-value=0.071 Score=32.65 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999955 45778889874 543 456789988
No 82
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.82 E-value=0.069 Score=38.76 Aligned_cols=53 Identities=11% Similarity=0.033 Sum_probs=39.2
Q ss_pred ceeeCCCCCCCc---cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSEDF---DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e~~---d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..+.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|..
T Consensus 49 ~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 49 NHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 456799999976 67788899764 544 35578999987543 6899998776643
No 83
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.82 E-value=0.13 Score=31.15 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQR-VHMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHT-TTCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999955 5678889976 4644 356789988
No 84
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.74 E-value=0.058 Score=32.96 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.3
Q ss_pred ceeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|++|+.. -....|..|... |..+ +.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en6_A 11 KPYGCNECGKTFSQKSILSAHQRT-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEEETTTTEEESSHHHHHHHHHH-HSSC-CCSSSCCC
T ss_pred cCeECCCCCcccCchHHHHHHHHH-cCCC-CCCCCCCC
Confidence 35999999994 456778899875 5543 56789988
No 85
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.68 E-value=0.13 Score=31.25 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=25.3
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 5999999994 45677888986 4544 356789886
No 86
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.67 E-value=0.09 Score=32.06 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=25.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 59999999954 56778899874 554 356789988
No 87
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.64 E-value=0.12 Score=37.18 Aligned_cols=52 Identities=23% Similarity=0.438 Sum_probs=38.7
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
..|.| .|+..| ....|..|+...+ . .+...|++|..... .++..|+...++.
T Consensus 9 k~~~C-~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 9 KLYPC-QCGKSFTHKSQRDRHMSMHL-G-LRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp CCEEC-TTSCEESSHHHHHHHHHHHS-C-CCSEECTTTSCEESSSHHHHHHHTTTCCC
T ss_pred CCEec-cCCCccCCHHHHHHHHHHcC-C-CcCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 35999 999944 6788999998543 2 35579999987543 6899998876543
No 88
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.64 E-value=0.11 Score=32.30 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=27.7
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCV 85 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~ 85 (227)
..|.|++|+..| ....|..|+. .|.. .+.-.|++|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKL-SHSG-EKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGG-GSCS-CCCCCSCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHH-hcCC-CCCccCCCCC
Confidence 469999999954 6778999987 4544 3567899995
No 89
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.63 E-value=0.08 Score=32.32 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999944 5677888976 4543 356789988
No 90
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=91.60 E-value=0.16 Score=40.11 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=23.4
Q ss_pred eeCC--CCCC-CccHHHhhhhhcccCCCCCCcccC--Cccccccc--hhhHhhhhc
Q 027149 50 YPCP--FCSE-DFDLVGLCCHIDEEHPVEAKSGVC--PVCVTRVT--MDMVDHITT 98 (227)
Q Consensus 50 F~CP--fC~e-~~d~~~L~~H~~~eH~~e~~~vvC--PVC~~~~~--~d~i~Hl~~ 98 (227)
|.|+ .|+. =.....|..|+...|....+.-.| ++|...-. .++..|+..
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence 5555 4555 334445555554455444444455 44544222 345555544
No 91
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=91.59 E-value=0.088 Score=35.55 Aligned_cols=50 Identities=26% Similarity=0.458 Sum_probs=24.2
Q ss_pred eeC--CCCCCCc-cHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhhcccc
Q 027149 50 YPC--PFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 50 F~C--PfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~~qH~ 101 (227)
|.| +.|+..| ....|..|... |.. .+.-.|++ |...-. .++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 556 5566633 34555556542 322 23345655 654322 455556555444
No 92
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.58 E-value=0.14 Score=31.20 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=25.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 59999999944 56778889874 544 355789988
No 93
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.52 E-value=0.099 Score=31.88 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=25.5
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+.. -....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQR-VHTGE-KPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGG-GGSCC-CCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 5999999994 45677888986 45443 56789988
No 94
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.50 E-value=0.14 Score=38.76 Aligned_cols=53 Identities=28% Similarity=0.362 Sum_probs=36.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC-CCCcccCCccc-----cc--cchhhHhhhhcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV-EAKSGVCPVCV-----TR--VTMDMVDHITTQHG 101 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~-e~~~vvCPVC~-----~~--~~~d~i~Hl~~qH~ 101 (227)
.|.|+.|+..| +...|..|+...|.. +.+.-+|++|. .. -...+..|+...++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 58999999954 578899999875533 44566777643 22 22578888876554
No 95
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.47 E-value=0.064 Score=32.96 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ-RPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC-CCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999999944 56778889874 5443 56789988
No 96
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=91.43 E-value=0.16 Score=37.09 Aligned_cols=52 Identities=23% Similarity=0.399 Sum_probs=38.4
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++|+..| ....|..|+.. |.. .+.-.|++ |..... .++..|+...++
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 359999999944 67789999884 433 35578987 977543 688999876554
No 97
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.42 E-value=0.072 Score=32.62 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 59999999944 56778889765 543 356789988
No 98
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=91.40 E-value=0.15 Score=31.06 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=25.7
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456788899764 554 356789988
No 99
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.26 E-value=0.12 Score=31.55 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999944 56778889764 544 356789988
No 100
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.11 E-value=0.12 Score=31.32 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=25.6
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456778889764 543 356789988
No 101
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=90.97 E-value=0.094 Score=31.93 Aligned_cols=34 Identities=24% Similarity=0.513 Sum_probs=26.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+..| ....|..|+.. |.. .+.-.||+|
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~c 44 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSS 44 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCC
Confidence 59999999954 67788899875 543 456789999
No 102
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=90.73 E-value=0.1 Score=41.16 Aligned_cols=50 Identities=28% Similarity=0.528 Sum_probs=18.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 100 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH 100 (227)
.|.||.|+..| ....|..|+...+ ..+...|++|..... .++..|+...+
T Consensus 21 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 73 (190)
T 2i13_A 21 PYACPECGKSFSRSDHLAEHQRTHT--GEKPYKCPECGKSFSDKKDLTRHQRTHT 73 (190)
T ss_dssp ----------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHHHHHH
T ss_pred CCcCCCCccccCCHHHHHHHHHHcC--CCCCccCCCcCchhCCHHHHHHHHHhcC
Confidence 36666666633 3445666655322 123455666655322 45566655443
No 103
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.43 E-value=0.084 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=25.2
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR-VHTGG-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH-HHHSC-CCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 5999999994 45577888976 45443 56789988
No 104
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.41 E-value=0.12 Score=31.56 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=25.3
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456778889764 543 356789988
No 105
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.37 E-value=0.15 Score=30.73 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999944 56788899874 543 356789988
No 106
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.27 E-value=0.09 Score=32.17 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=25.4
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456788889775 543 345789988
No 107
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.97 E-value=0.18 Score=30.61 Aligned_cols=34 Identities=26% Similarity=0.216 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999955 56778899764 543 356789988
No 108
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=89.91 E-value=0.15 Score=34.36 Aligned_cols=48 Identities=21% Similarity=0.251 Sum_probs=36.6
Q ss_pred ceeeCCC--CCC-CccHHHhhhhhcccCCCCCCcccCCc---ccccc--chhhHhhhhccc
Q 027149 48 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPV---CVTRV--TMDMVDHITTQH 100 (227)
Q Consensus 48 ~~F~CPf--C~e-~~d~~~L~~H~~~eH~~e~~~vvCPV---C~~~~--~~d~i~Hl~~qH 100 (227)
..|.||+ |+. =.....|..|+...+. -.|++ |...- ..++..|+...|
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 3599999 999 4467889999976544 68999 87643 368899987655
No 109
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.64 E-value=0.13 Score=31.41 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 59999999944 56788899874 543 355789988
No 110
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=89.55 E-value=0.22 Score=33.97 Aligned_cols=52 Identities=19% Similarity=0.429 Sum_probs=32.7
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCC--ccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCP--VC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++ |+..| ....|..|+.. |.. .+.-.|| +|..... .++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 62 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTG 62 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCC
Confidence 4688888 88844 56677788774 332 3456786 4866432 577777765443
No 111
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.30 E-value=0.21 Score=30.39 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=25.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
.|.|++|+..| ....|..|... |.. .+.-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999954 56778889764 543 356788886
No 112
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=88.84 E-value=0.35 Score=32.98 Aligned_cols=49 Identities=20% Similarity=0.398 Sum_probs=35.5
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 98 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~ 98 (227)
..|.||+ |+..| ....|..|+. .|..+ +.-.|++|...-. .++..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYR-KHTGH-RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHH-HHHCC-CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHH-HcCCC-CCccCCCCCcccCCHHHHHHHHHh
Confidence 4599986 99955 6778899986 45433 4578999987443 578888753
No 113
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=88.52 E-value=0.37 Score=35.95 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=23.5
Q ss_pred ceeeCCCCCC-------------CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSE-------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e-------------~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+ .|+...+..|+.. ...||+|...+.
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCC
T ss_pred HhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCC
Confidence 6899999854 3445555555542 358999988655
No 114
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=88.25 E-value=0.47 Score=35.94 Aligned_cols=51 Identities=27% Similarity=0.419 Sum_probs=36.7
Q ss_pred eeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhhccccc
Q 027149 50 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 50 F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~~qH~~ 102 (227)
|.|++|+..| ....|..|+.. |. ..+.-.|++ |..... .++..|+...++.
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRV-HT-GEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHH-HH-CCCSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred cCCCCcccccCCHHHHHHHHHh-cC-CCCcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 8999999954 56778899885 33 235578988 977543 6888998766543
No 115
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=88.09 E-value=0.2 Score=33.13 Aligned_cols=35 Identities=26% Similarity=0.545 Sum_probs=24.9
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccccc
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 87 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~ 87 (227)
.|.||.|+..|....-.. ..|.. .+.-.|++|...
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~ 48 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTE 48 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCB
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCc
Confidence 599999999877655332 45544 356899999764
No 116
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=88.04 E-value=0.47 Score=37.28 Aligned_cols=52 Identities=23% Similarity=0.332 Sum_probs=38.8
Q ss_pred ceeeC--CCCCC-CccHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhhcccc
Q 027149 48 YEYPC--PFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~C--PfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.| +.|+. =-....|..|+.. |.. .+.-.||+ |...-. .++..|+...++
T Consensus 103 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 103 CVYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp SCCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred ceeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 35999 77999 5567889999885 443 35578988 987543 689999987666
No 117
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=87.87 E-value=0.19 Score=38.89 Aligned_cols=52 Identities=27% Similarity=0.439 Sum_probs=40.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH~~ 102 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|...-. .+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTGE-RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHTC-CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhcc-ccCCC-ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 59999999955 5678999976 46443 5679999987543 6899999988864
No 118
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.32 E-value=0.054 Score=35.70 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=29.4
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 100 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~qH 100 (227)
..|.|+.|+..|.......- .+.-.|++|..... .++..|+...+
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~ 63 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNES 63 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred CCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence 35999999996654332221 45678999976443 46777776544
No 119
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=87.17 E-value=0.12 Score=41.24 Aligned_cols=50 Identities=12% Similarity=0.213 Sum_probs=30.4
Q ss_pred cccCCcchhhhccCcceeeCCCCCC--CccHHHhhhhhcccCCCCCCcccCCccccccchhhHhh
Q 027149 33 FEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDH 95 (227)
Q Consensus 33 ~e~~~~ddd~e~r~~~~F~CPfC~e--~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~~d~i~H 95 (227)
+++++.+++++.. .++|| ||. .+....|-. ...+.|+-|+..+..-|..|
T Consensus 99 ~~~m~~~e~~~~f---~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~ 150 (155)
T 2l6l_A 99 LEEMSWNEGDHSF---YLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNH 150 (155)
T ss_dssp TTTSEEETTTTEE---EEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCC
T ss_pred HHHhccccCCcEE---EEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEccc
Confidence 4455543332233 59999 998 444444432 16799999998776545544
No 120
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=86.99 E-value=0.29 Score=35.32 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=24.1
Q ss_pred ceeeCCCCCC------------CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e------------~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+ .|+...+..|+.. ...||+|...+.
T Consensus 13 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 59 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLT 59 (85)
T ss_dssp TTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCC
T ss_pred hheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCC
Confidence 6799999854 4555555566552 368999988654
No 121
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.98 E-value=0.15 Score=34.86 Aligned_cols=43 Identities=26% Similarity=0.375 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHHH--hhhh-----hcccCCCC-CCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVE-AKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H-----~~~eH~~e-~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+.... -|.| |...+-.. .....||+|...+..
T Consensus 19 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred cCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 6799999998555321 2333 22222211 346689999887653
No 122
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=86.52 E-value=0.32 Score=34.93 Aligned_cols=47 Identities=23% Similarity=0.379 Sum_probs=20.7
Q ss_pred eeCC--CCCCC-ccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhc
Q 027149 50 YPCP--FCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 98 (227)
Q Consensus 50 F~CP--fC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~ 98 (227)
|.|+ .|+.. -....|..|+.. |. ..+.-.|++|...-. .++..|+..
T Consensus 37 ~~C~~~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 37 YQCDFKDCERRFSRSDQLKRHQRR-HT-GVKPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HH-CCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred ccCCCCCCcCccCCHHHHHHHHHH-cC-CCCCccCCccCchhCCHHHHHHHHHH
Confidence 5555 25552 234445555543 21 123345555544322 345555543
No 123
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=86.40 E-value=0.22 Score=34.53 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=24.2
Q ss_pred ceeeCCCCCCCccHHH--hhhhhcccCCC----CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHIDEEHPV----EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~~~eH~~----e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+-|.... -|-|.-...+. ......||+|...+.
T Consensus 7 ~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 6799999988554321 23332111111 223678999988664
No 124
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.76 E-value=0.64 Score=27.96 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=22.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999999955 56778888764 5443 4556764
No 125
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=85.36 E-value=0.54 Score=25.25 Aligned_cols=26 Identities=27% Similarity=0.489 Sum_probs=19.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 38899999965 457788886556654
No 126
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=85.30 E-value=0.59 Score=32.48 Aligned_cols=50 Identities=24% Similarity=0.361 Sum_probs=36.7
Q ss_pred ceeeCCC--CCC-CccHHHhhhhhcccCCCCCCcccCCccccccc--hhhHhhhhcc
Q 027149 48 YEYPCPF--CSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQ 99 (227)
Q Consensus 48 ~~F~CPf--C~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~--~d~i~Hl~~q 99 (227)
..|.||+ |+. --....|..|+.. |.. .+.-.|++|...-. .++..|+...
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHh
Confidence 3599986 999 4467889999875 433 35578999987543 6888888654
No 127
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=84.78 E-value=0.51 Score=34.17 Aligned_cols=29 Identities=34% Similarity=0.888 Sum_probs=24.9
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCC
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAK 77 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~ 77 (227)
.|.|++|+.. .....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 4999999994 5788999999999998764
No 128
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=84.72 E-value=0.47 Score=29.83 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=23.4
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCC
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVE 75 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e 75 (227)
+-|.||.|-+ =-....|..|-+..|..+
T Consensus 4 EGFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 4 EGFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred cccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 3599999998 557788999999999864
No 129
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=84.67 E-value=0.71 Score=34.49 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=23.5
Q ss_pred ceeeCCCCCC------------CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e------------~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+ .|+...+..|+.. ...||+|...+.
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 74 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLT 74 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCC
T ss_pred HhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCC
Confidence 6899999865 3444555555442 468999988654
No 130
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=84.56 E-value=0.71 Score=30.50 Aligned_cols=48 Identities=21% Similarity=0.385 Sum_probs=34.6
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhcccCCCCCCcccCCc--cccccc--hhhHhhhh
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHIT 97 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~~eH~~e~~~vvCPV--C~~~~~--~d~i~Hl~ 97 (227)
..|.|++ |+..| ....|..|+.. |.. .+.-.|++ |..... .++..|+.
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred CceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 4699999 99954 57789999874 543 35678976 987543 57777764
No 131
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=84.46 E-value=0.52 Score=33.78 Aligned_cols=52 Identities=25% Similarity=0.513 Sum_probs=38.4
Q ss_pred ceeeCCC--CCCC-ccHHHhhhhhcccCCCCCCcccCC--ccccccc--hhhHhhhhcccc
Q 027149 48 YEYPCPF--CSED-FDLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 101 (227)
Q Consensus 48 ~~F~CPf--C~e~-~d~~~L~~H~~~eH~~e~~~vvCP--VC~~~~~--~d~i~Hl~~qH~ 101 (227)
..|.|++ |+.. .....|..|+.. |.. .+.-.|+ +|...-. .++..|+...++
T Consensus 5 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 5 RPFMCAYPGCNKRYFKLSHLQMHSRK-HTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CCBCCCSTTSCCCBSCHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeeCCCCCCcchhCCHHHHHHHHHh-hCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 3599998 9994 467889999884 433 3557899 7977543 689999887554
No 132
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.43 E-value=0.87 Score=27.41 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=22.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTTS-SCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCCC-CCCCCCC
Confidence 59999999944 5567888875 45443 4556764
No 133
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.37 E-value=0.94 Score=27.26 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=22.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQK-IHTGE-RPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHT-TTSCC-CCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 59999999954 5577888876 45443 4556764
No 134
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.36 E-value=0.51 Score=28.52 Aligned_cols=33 Identities=27% Similarity=0.382 Sum_probs=22.4
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+.. -....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCCC-CCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 4899999994 455678888764 5433 4556764
No 135
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.16 E-value=0.92 Score=27.46 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=22.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|+.|+..| ....|..|+. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHS-VHSGE-RPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTT-TTTSC-CSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHH-hcCCC-CCCCCCC
Confidence 58999999944 5567888876 45543 4566764
No 136
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=84.07 E-value=0.26 Score=36.88 Aligned_cols=35 Identities=20% Similarity=0.652 Sum_probs=22.8
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~ 87 (227)
..|.||||+-+=.+ ++.-+.......+.|-+|-..
T Consensus 22 t~F~CPfCnh~~sV-----~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 22 TQFTCPFCNHEKSC-----DVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp SCCCCTTTCCSSCE-----EEEEETTTTEEEEEESSSCCE
T ss_pred CeEcCCCCCCCCeE-----EEEEEccCCEEEEEcccCCCe
Confidence 68999999873211 233333444556889999763
No 137
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.07 E-value=0.88 Score=27.40 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=22.2
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|+. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGG-GGCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 58999999954 4567888876 45443 4456764
No 138
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.91 E-value=0.83 Score=27.50 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=22.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSCS-CCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCCC-CCCCCCC
Confidence 48999999955 4567888875 45443 4556764
No 139
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.90 E-value=0.94 Score=27.16 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=22.7
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+.. -....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSSC-CSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCCC-CCcCCCC
Confidence 5999999994 45677888876 45443 4556764
No 140
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.82 E-value=0.83 Score=27.50 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=22.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 59999999944 45778888764 5433 4456664
No 141
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.14 E-value=0.97 Score=27.28 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=23.0
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+.. -....|..|.. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSCC-CCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 5999999994 45677888876 45433 4566764
No 142
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.92 E-value=1.1 Score=27.10 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=21.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|+.|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGG-GGTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHH-hcCCC-CCCCCCC
Confidence 48899998844 4567788866 35433 4456654
No 143
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.93 E-value=1.2 Score=26.71 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=22.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQV-IHTGE-KPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHT-TTCCS-CCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 59999999955 4577888876 45433 4456664
No 144
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.42 E-value=0.79 Score=27.53 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=21.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSGE-KPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCCC-SCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 48899999844 55678888763 5433 4456664
No 145
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=81.35 E-value=0.11 Score=37.24 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=24.5
Q ss_pred ceeeCCCCCCCccH-HHh--hhh-----hcccCCCCCCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDL-VGL--CCH-----IDEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~-~~L--~~H-----~~~eH~~e~~~vvCPVC~~~~ 88 (227)
..|.||.|.+.|.. ..| |-| |...+-.......||+|...+
T Consensus 12 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 67999999884432 233 444 222222233446899998764
No 146
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=81.04 E-value=0.64 Score=31.94 Aligned_cols=43 Identities=30% Similarity=0.514 Sum_probs=25.7
Q ss_pred ceeeCCCCCCCccHHH-h-hhh-----hcccCCCC-----CCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLVG-L-CCH-----IDEEHPVE-----AKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~-L-~~H-----~~~eH~~e-----~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+.... | |.| |...+-.. .....||+|...+..
T Consensus 11 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 5799999988554321 1 333 33333222 236789999887653
No 147
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=80.76 E-value=0.79 Score=27.69 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=21.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTTS-CSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999999844 55678888764 5433 4456764
No 148
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.54 E-value=1.3 Score=26.48 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=22.1
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|+. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSSC-CSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 58999999944 5577888876 45433 4456664
No 149
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.26 E-value=1.3 Score=26.55 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=22.3
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+.. -....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQR-THTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TSCSS-SSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 5899999994 45677888876 45433 4456664
No 150
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=80.03 E-value=1.3 Score=28.07 Aligned_cols=28 Identities=29% Similarity=0.532 Sum_probs=22.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 76 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~ 76 (227)
.|.||+|+..| ....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 59999999954 67889999988887643
No 151
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=79.91 E-value=1.4 Score=25.86 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=19.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+..| ....|..|... |..+ +.-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 48888888844 45667778763 4433 334454
No 152
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.70 E-value=1.4 Score=26.59 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=22.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|+.|+..| ....|..|.. .|....+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 58999999944 4577888875 4554234556764
No 153
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=79.45 E-value=0.8 Score=30.45 Aligned_cols=33 Identities=27% Similarity=0.624 Sum_probs=20.4
Q ss_pred ceeeCCCCCCCccHH-HhhhhhcccCCCCCCc--ccCCcccc
Q 027149 48 YEYPCPFCSEDFDLV-GLCCHIDEEHPVEAKS--GVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~-~L~~H~~~eH~~e~~~--vvCPVC~~ 86 (227)
..|.|+.||--+|.. +-- .+++.-. -+||+|.+
T Consensus 3 ~~y~C~vCGyvyd~~~Gd~------t~f~~lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEHDN------VPFDQLPDDWCCPVCGV 38 (46)
T ss_dssp CCEEETTTCCEECGGGGTT------CCGGGSCTTCBCTTTCC
T ss_pred CEEECCCCCeEEeCCcCCC------cchhhCCCCCcCcCCCC
Confidence 368899998866542 111 4444333 48999976
No 154
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.02 E-value=1.2 Score=26.92 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=21.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 48899998844 45677888763 443 34556664
No 155
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=78.88 E-value=1 Score=35.54 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=27.1
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCc
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKS 78 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~ 78 (227)
..+.|=||.+ --++..+..||.+.|.++-..
T Consensus 14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 4699999999 668999999999999997554
No 156
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.87 E-value=1.2 Score=26.88 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=22.1
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTSS-CCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 58999999954 45677888764 5433 4456764
No 157
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=78.82 E-value=0.77 Score=33.03 Aligned_cols=29 Identities=28% Similarity=0.635 Sum_probs=21.9
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~ 88 (227)
-.|.|+-|+..|++. ....+.||-|..++
T Consensus 27 v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 27 LKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred EEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 579999999987653 23457899997654
No 158
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=78.81 E-value=1.2 Score=35.33 Aligned_cols=49 Identities=24% Similarity=0.364 Sum_probs=31.0
Q ss_pred eeeCC--CCCCCccHHHhhhhhcccCCCCCCcccCCccccccc-hhhHhhhhccc
Q 027149 49 EYPCP--FCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHITTQH 100 (227)
Q Consensus 49 ~F~CP--fC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~-~d~i~Hl~~qH 100 (227)
.+.|| -|.+-+.+..|..|.. + -+-+.+.||-|...+. .++..|+....
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~-~--C~~~~v~C~~C~~~~~r~~l~~H~~~~C 133 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA-H--CEFALMDCPQCQRPFQKFHINIHILKDC 133 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT-T--CTTSEEECTTTCCEEEGGGHHHHHHHTC
T ss_pred ccCCCCCCCCceecHhHHHHHHh-c--CCceeeECCCCChHHHHHHHHHHhhhhC
Confidence 47775 4777777777777753 1 2234577888876543 57777775433
No 159
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=78.40 E-value=1.1 Score=30.13 Aligned_cols=28 Identities=21% Similarity=0.599 Sum_probs=23.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 76 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~ 76 (227)
.|.|++|+..| ....|..|+...|..+.
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred ccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 59999999955 67889999999998653
No 160
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=78.24 E-value=1 Score=23.83 Aligned_cols=23 Identities=35% Similarity=0.710 Sum_probs=15.8
Q ss_pred eeCCCCCCCc-cHHHhhhhhcccC
Q 027149 50 YPCPFCSEDF-DLVGLCCHIDEEH 72 (227)
Q Consensus 50 F~CPfC~e~~-d~~~L~~H~~~eH 72 (227)
|.|++|+..| ....|..|....|
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred ccCCCCCCccCCHHHHHHHHHHHc
Confidence 7888888855 4467777766433
No 161
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.14 E-value=1.2 Score=26.77 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=22.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTGE-KSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSSC-CCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCCC-CCCCCCC
Confidence 59999999954 4567888876 45543 4556764
No 162
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=77.87 E-value=0.66 Score=33.25 Aligned_cols=41 Identities=22% Similarity=0.567 Sum_probs=25.4
Q ss_pred ceeeCCCCCCCccHHH---h---hhhh-----cccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG---L---CCHI-----DEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~---L---~~H~-----~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..+.||.|-+.++... + |-|. -... .+..+..||+|...+.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~-~~~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI-RTDENGLCPACRKPYP 61 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHH-TTSSCSBCTTTCCBCS
T ss_pred cCCcCCccCccCccccccccccCCCCCcCHHHHHHH-HhcCCCCCCCCCCccC
Confidence 4588999999775432 1 4442 2111 1224678999988665
No 163
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=77.84 E-value=1.6 Score=35.93 Aligned_cols=25 Identities=32% Similarity=0.676 Sum_probs=17.5
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.||.||.=++- .-+.+||||..
T Consensus 137 ~~~~C~~CG~i~~~--------------~~p~~CP~Cg~ 161 (170)
T 3pwf_A 137 KVYICPICGYTAVD--------------EAPEYCPVCGA 161 (170)
T ss_dssp CEEECTTTCCEEES--------------CCCSBCTTTCC
T ss_pred CeeEeCCCCCeeCC--------------CCCCCCCCCCC
Confidence 56899999984430 12349999975
No 164
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.72 E-value=0.92 Score=31.26 Aligned_cols=42 Identities=31% Similarity=0.713 Sum_probs=26.8
Q ss_pred ceeeCCCCCCCccHHH-----hhhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG-----LCCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~-----L~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 5689999988765331 367754333432 13468999987664
No 165
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.55 E-value=2.1 Score=25.70 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=25.7
Q ss_pred ceeeCC--CCCCC-ccHHHhhhhhcccCCCCCCcccCCcc
Q 027149 48 YEYPCP--FCSED-FDLVGLCCHIDEEHPVEAKSGVCPVC 84 (227)
Q Consensus 48 ~~F~CP--fC~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC 84 (227)
..|.|+ .|+.. .....|..|... |.. .+.-.|++|
T Consensus 11 k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 11 KPFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 359997 89994 456788899874 544 356789988
No 166
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.26 E-value=0.4 Score=33.14 Aligned_cols=43 Identities=26% Similarity=0.416 Sum_probs=24.6
Q ss_pred ceeeCCCCCCCccHHH--hhhhhcccCCC---------CCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHIDEEHPV---------EAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~~~eH~~---------e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+.... -|.|.-=..+. ......||+|...+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 6799999998654321 13332211111 1236789999877653
No 167
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.24 E-value=0.8 Score=26.15 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=17.0
Q ss_pred eeeCCCCCCCccH--HHhhhhhc
Q 027149 49 EYPCPFCSEDFDL--VGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~d~--~~L~~H~~ 69 (227)
.|.|++|+..|.. ..|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHH
Confidence 5999999997766 57888875
No 168
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.83 E-value=1.7 Score=25.61 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=19.6
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+.. -....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 4888888884 455677778753 5433 334443
No 169
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.71 E-value=1.6 Score=26.03 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=22.1
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|+.|+..| ....|..|... |.. .+.-.|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 58999999954 55678888764 443 34456664
No 170
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.70 E-value=2.1 Score=25.64 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=22.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSSS-CCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 58999999955 5677888865 45433 4456664
No 171
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.54 E-value=0.33 Score=34.05 Aligned_cols=42 Identities=19% Similarity=0.355 Sum_probs=23.8
Q ss_pred ceeeCCCCCCCccHHHh--hhhhcccCCC---CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVGL--CCHIDEEHPV---EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L--~~H~~~eH~~---e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.+....+ |-|.--..+. -.+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 57999999885544322 3332111111 012457999988765
No 172
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=76.48 E-value=0.39 Score=33.20 Aligned_cols=43 Identities=28% Similarity=0.446 Sum_probs=24.9
Q ss_pred ceeeCCCCCCCccHHH--hhhhh-----cccCC----CCCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHI-----DEEHP----VEAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~-----~~eH~----~e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+.... -|.|. ...+. .......||+|...+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 5689999988654332 24442 11111 11236789999887653
No 173
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.32 E-value=1.2 Score=26.74 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=21.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |..+ +.-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHSC-CCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 48899999844 45677788763 4433 4456764
No 174
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=76.13 E-value=0.76 Score=34.65 Aligned_cols=13 Identities=38% Similarity=1.262 Sum_probs=10.8
Q ss_pred ceeeCCCCCCCcc
Q 027149 48 YEYPCPFCSEDFD 60 (227)
Q Consensus 48 ~~F~CPfC~e~~d 60 (227)
-.|.||.||++|-
T Consensus 50 F~FkCP~CgEEFy 62 (95)
T 2k5c_A 50 FVFKCPVCGEEFY 62 (95)
T ss_dssp SEEECTTTCCEEE
T ss_pred HhhcCCCccHHHh
Confidence 4699999999774
No 175
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.09 E-value=0.51 Score=31.35 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=11.0
Q ss_pred ceeeCCCCCCCccH
Q 027149 48 YEYPCPFCSEDFDL 61 (227)
Q Consensus 48 ~~F~CPfC~e~~d~ 61 (227)
..+.||.|.+.+..
T Consensus 19 ~~~~C~IC~~~~~~ 32 (63)
T 2ysj_A 19 EEVICPICLDILQK 32 (63)
T ss_dssp CCCBCTTTCSBCSS
T ss_pred cCCCCCcCCchhCC
Confidence 67999999885553
No 176
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=75.87 E-value=2.4 Score=29.00 Aligned_cols=46 Identities=30% Similarity=0.491 Sum_probs=33.2
Q ss_pred CCCCc-cHHHhhhhhcccCCCCC-----CcccCC--ccccc--cchhhHhhhhccc
Q 027149 55 CSEDF-DLVGLCCHIDEEHPVEA-----KSGVCP--VCVTR--VTMDMVDHITTQH 100 (227)
Q Consensus 55 C~e~~-d~~~L~~H~~~eH~~e~-----~~vvCP--VC~~~--~~~d~i~Hl~~qH 100 (227)
|++.| +...|+.|+..+|.... .+.+|. -|... ....|+.||+..|
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 88844 45679999999997654 256776 67553 2357999998876
No 177
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=75.42 E-value=1.5 Score=36.53 Aligned_cols=36 Identities=17% Similarity=0.048 Sum_probs=21.3
Q ss_pred ceeeCCCCCCCc------------cHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDF------------DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~------------d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+-| +...+..|+... ...||+|...+.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~ 254 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLT 254 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCC
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCc
Confidence 579999997633 233333333321 223999988664
No 178
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.90 E-value=1.3 Score=29.42 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=28.1
Q ss_pred ceeeCCC--CCCC-ccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPF--CSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPf--C~e~-~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.|++ |+.. -....|..|+.. |.. .+.-.|++|..
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k 76 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGP 76 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSC
T ss_pred CCeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCC
Confidence 3599999 9994 467889999884 543 35678999965
No 179
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=74.85 E-value=2.2 Score=22.10 Aligned_cols=20 Identities=30% Similarity=0.649 Sum_probs=14.7
Q ss_pred eeCCCCCCCcc-HHHhhhhhc
Q 027149 50 YPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 50 F~CPfC~e~~d-~~~L~~H~~ 69 (227)
|.|+.|+..|. ...|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 78899988554 567777765
No 180
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.41 E-value=1 Score=28.94 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=10.8
Q ss_pred ceeeCCCCCCCccH
Q 027149 48 YEYPCPFCSEDFDL 61 (227)
Q Consensus 48 ~~F~CPfC~e~~d~ 61 (227)
..+.||.|.+.+..
T Consensus 14 ~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 14 VEASCSVCLEYLKE 27 (58)
T ss_dssp CCCBCSSSCCBCSS
T ss_pred cCCCCccCCcccCc
Confidence 56899999885544
No 181
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.31 E-value=1.8 Score=26.09 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=21.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+..| ....|..|... |..+ +.-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSSC-CCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCCC-CCCCCCC
Confidence 48899999855 45678888764 5433 3445553
No 182
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.20 E-value=2.7 Score=25.16 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=20.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQR-VHSGE-KPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGG-GSCCS-CCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 48899998855 4466778876 35432 344555
No 183
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=74.15 E-value=0.85 Score=34.40 Aligned_cols=38 Identities=24% Similarity=0.368 Sum_probs=26.9
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCC--------------CCcccCCcccc
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVE--------------AKSGVCPVCVT 86 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e--------------~~~vvCPVC~~ 86 (227)
--.||.||+-+|-.+|+.-+-.--.++ .-.-.||+|-.
T Consensus 8 ~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgE 59 (95)
T 2k5c_A 8 MAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGE 59 (95)
T ss_dssp CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCC
T ss_pred cccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccH
Confidence 358999999999999988765443331 11234999976
No 184
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=74.08 E-value=1.7 Score=26.96 Aligned_cols=29 Identities=28% Similarity=0.689 Sum_probs=17.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAK 77 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~ 77 (227)
-|.|++|+..| ....|..|+...|..+..
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 47888888844 456677777645655443
No 185
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.04 E-value=2.3 Score=28.45 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=28.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTR 87 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~ 87 (227)
.|.|++|+..| ....|..|+...|. .+...|++|...
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~~ 84 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGPS 84 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCCC
T ss_pred ceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCCC
Confidence 59999999954 67889999986554 345678888653
No 186
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=73.76 E-value=0.42 Score=32.28 Aligned_cols=42 Identities=21% Similarity=0.475 Sum_probs=22.7
Q ss_pred ceeeCCCCCCCccH----H-HhhhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDL----V-GLCCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~----~-~L~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
....||.|.+.|.. . --|.|.-=.++.. .+...||+|...+.
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 62 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCcccc
Confidence 56889999876642 1 1244532111111 12346999987654
No 187
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.70 E-value=1.7 Score=22.73 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=15.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~ 69 (227)
.|.|+.|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHH
Confidence 38899999854 4667777765
No 188
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.66 E-value=2.9 Score=24.51 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=19.2
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVC 81 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvC 81 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C 43 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THTGE-SGPSS 43 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTCCS-SSSCC
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcCCC-CCCCC
Confidence 48888888844 4566777875 45433 33344
No 189
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=73.65 E-value=1.6 Score=22.92 Aligned_cols=22 Identities=23% Similarity=0.511 Sum_probs=15.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 38899999955 45667777653
No 190
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.55 E-value=1.3 Score=26.68 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=21.0
Q ss_pred eeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCc
Q 027149 49 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV 83 (227)
Q Consensus 49 ~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPV 83 (227)
.|.|++|+. =-....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQE-TLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSSC-CSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 488999988 4455677888764 4332 3455653
No 191
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=73.55 E-value=1 Score=37.40 Aligned_cols=26 Identities=19% Similarity=0.580 Sum_probs=18.0
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.|+.||--++-. + -+-+||+|.+
T Consensus 154 ~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~ 179 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT--------G-----APELCPACAH 179 (191)
T ss_dssp EEEEETTTCCEEEEE--------E-----CCSBCTTTCC
T ss_pred ceEEECCCCCEeeCC--------C-----CCCCCCCCcC
Confidence 479999999855511 1 1229999976
No 192
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=73.43 E-value=1.1 Score=28.29 Aligned_cols=25 Identities=32% Similarity=0.577 Sum_probs=22.1
Q ss_pred eeCCCCCC-CccHHHhhhhhcccCCC
Q 027149 50 YPCPFCSE-DFDLVGLCCHIDEEHPV 74 (227)
Q Consensus 50 F~CPfC~e-~~d~~~L~~H~~~eH~~ 74 (227)
--|-||-+ .-|+.-|..|+.+.|-.
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46999999 88999999999999864
No 193
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=73.34 E-value=1.7 Score=28.59 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=26.7
Q ss_pred ceeeCCCCCCCccHHH--hhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|.... =|.|.-=..+.......||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 4688999988555432 24454333344446678999987654
No 194
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=73.34 E-value=0.52 Score=32.64 Aligned_cols=40 Identities=20% Similarity=0.463 Sum_probs=22.8
Q ss_pred ceeeCCCCCCCccHHH-h--hhhhcccCCC-----CCCcccCCccccc
Q 027149 48 YEYPCPFCSEDFDLVG-L--CCHIDEEHPV-----EAKSGVCPVCVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~-L--~~H~~~eH~~-----e~~~vvCPVC~~~ 87 (227)
..+.||.|.+.|.... | |-|.-=..+. ......||+|...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 6799999988554432 2 3343211111 1223589999775
No 195
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.26 E-value=1.9 Score=22.59 Aligned_cols=22 Identities=27% Similarity=0.785 Sum_probs=17.1
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
.|.|+.|+..| ....|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 58999999955 56778888763
No 196
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=72.37 E-value=2 Score=35.74 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=25.2
Q ss_pred ceeeCCCCCC------------CccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e------------~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+ .|+...+..|+...+ ..||+|...+.
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~ 152 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLT 152 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCC
T ss_pred HhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCC
Confidence 6799999754 566777777776421 16999987654
No 197
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=72.12 E-value=2.5 Score=23.87 Aligned_cols=22 Identities=27% Similarity=0.614 Sum_probs=16.7
Q ss_pred eeeCCCCCCCcc-HHHhhhhhcc
Q 027149 49 EYPCPFCSEDFD-LVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~~ 70 (227)
.|.|++|+..|. ...|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 599999999554 5677778653
No 198
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.97 E-value=3.2 Score=27.65 Aligned_cols=30 Identities=27% Similarity=0.695 Sum_probs=24.2
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCC
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAK 77 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~ 77 (227)
..|.|++|+..| ....|..|+...|..+..
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred cccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 359999999955 678899999888887543
No 199
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.92 E-value=1.9 Score=24.25 Aligned_cols=23 Identities=22% Similarity=0.492 Sum_probs=17.3
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
..|.|++|+..| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCEECCCCCceeCCHHHHHHHHHH
Confidence 369999999955 56778888763
No 200
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=71.77 E-value=1.4 Score=27.39 Aligned_cols=24 Identities=29% Similarity=0.693 Sum_probs=19.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEH 72 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH 72 (227)
.|.||+|+..| ....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 49999999954 6778999988666
No 201
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.67 E-value=2.7 Score=25.17 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=20.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+..| ....|..|.. .|..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKR-VHTGE-RSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HCSSC-CSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 48888888854 4567778876 35433 344554
No 202
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=71.59 E-value=1.7 Score=22.92 Aligned_cols=20 Identities=35% Similarity=0.695 Sum_probs=14.7
Q ss_pred eeCCCCCCCc-cHHHhhhhhc
Q 027149 50 YPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 50 F~CPfC~e~~-d~~~L~~H~~ 69 (227)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHT
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 8899998854 4566777765
No 203
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=71.25 E-value=2.5 Score=29.15 Aligned_cols=47 Identities=19% Similarity=0.409 Sum_probs=34.2
Q ss_pred ceeeCC-CCCCCccHHHhhhhhcccCCCCCCcccCCccccccc-hhhHhhh
Q 027149 48 YEYPCP-FCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHI 96 (227)
Q Consensus 48 ~~F~CP-fC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~-~d~i~Hl 96 (227)
....|| .|++.+-...|-.|+..+ -..+.+.|+.|...+. .++..|.
T Consensus 15 ~~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 15 NVIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp SCCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred cccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 357885 799888888888887632 2346788999977654 5777776
No 204
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=71.23 E-value=2 Score=22.56 Aligned_cols=21 Identities=19% Similarity=0.692 Sum_probs=15.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~ 69 (227)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 48999999955 4567777764
No 205
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.13 E-value=2.6 Score=25.07 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=20.1
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+.. -....|..|+. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQA-IHTGK-KPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHT-TSCCC-CCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 4888888884 44567778876 35432 344555
No 206
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.04 E-value=3.3 Score=23.98 Aligned_cols=25 Identities=40% Similarity=0.667 Sum_probs=16.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|+.|+..| ....|..|... |..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 35 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTV 35 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCC
Confidence 48888888844 45667778663 543
No 207
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=70.56 E-value=1.9 Score=22.44 Aligned_cols=21 Identities=33% Similarity=0.814 Sum_probs=14.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~ 69 (227)
.|.|+.|+..| ....|..|..
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHH
Confidence 37888898855 4456667764
No 208
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.25 E-value=0.88 Score=30.50 Aligned_cols=43 Identities=21% Similarity=0.318 Sum_probs=24.8
Q ss_pred ceeeCCCCCCCccHH--HhhhhhcccCCC----CCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLV--GLCCHIDEEHPV----EAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~--~L~~H~~~eH~~----e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+... --|.|.-=..+. ......||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred cCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 679999998854432 223332111111 2455789999887653
No 209
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=70.20 E-value=1.2 Score=35.56 Aligned_cols=28 Identities=36% Similarity=0.917 Sum_probs=20.6
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~ 88 (227)
-.|.|+-||..|+.. .....||.|-..+
T Consensus 131 ~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 131 WRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred EEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 369999999977643 3346999996643
No 210
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=70.19 E-value=2.1 Score=23.66 Aligned_cols=22 Identities=36% Similarity=0.800 Sum_probs=17.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
.|.|+.|+..| ....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 59999999954 55778888764
No 211
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=70.15 E-value=2.6 Score=22.06 Aligned_cols=21 Identities=24% Similarity=0.623 Sum_probs=15.6
Q ss_pred eeeCCCCCCCcc-HHHhhhhhc
Q 027149 49 EYPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~ 69 (227)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 489999999554 467777865
No 212
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.05 E-value=4 Score=24.06 Aligned_cols=24 Identities=29% Similarity=0.515 Sum_probs=16.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHP 73 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~ 73 (227)
.|.|+.|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 36 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THA 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcC
Confidence 48899998844 4567778876 454
No 213
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=69.97 E-value=0.67 Score=29.75 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=22.9
Q ss_pred eeeCCCCCCCccH----HHh--hhhhcccCCC---CCCcccCCcccccc
Q 027149 49 EYPCPFCSEDFDL----VGL--CCHIDEEHPV---EAKSGVCPVCVTRV 88 (227)
Q Consensus 49 ~F~CPfC~e~~d~----~~L--~~H~~~eH~~---e~~~vvCPVC~~~~ 88 (227)
...||.|.+++.. ..| |.|.-=.++. -.+...||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 4679999886654 223 5554222221 12356899997654
No 214
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.97 E-value=2.2 Score=25.58 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=19.2
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+..| ....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 48888888844 45667777653 4332 334444
No 215
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=69.73 E-value=0.48 Score=35.91 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=24.2
Q ss_pred ceeeCCCCCCCccHHH--hhhh-----hcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H-----~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|.... -|-| |...+- ..+...||+|...+.
T Consensus 51 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQHNVCKDCLDRSF-RAQVFSCPACRYDLG 98 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCC
T ss_pred cCCCCCcCChHHcCcEEeeCCCcccHHHHHHHH-hHCcCCCCCCCccCC
Confidence 5699999988555322 2333 222211 234458999987664
No 216
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=69.55 E-value=1.8 Score=27.86 Aligned_cols=26 Identities=35% Similarity=0.828 Sum_probs=20.7
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCC
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHP 73 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~ 73 (227)
..|.||+|+..| ....|..|+...|.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999955 56789999887764
No 217
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=68.95 E-value=2.9 Score=23.25 Aligned_cols=23 Identities=17% Similarity=0.457 Sum_probs=17.6
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
..|.|++|+..| ....|..|...
T Consensus 6 k~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 6 RPFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp SCEECSSSCCEESSHHHHHHHHGG
T ss_pred cCeeCCCCCcccCCHHHHHHHHHH
Confidence 359999999955 56778888764
No 218
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.77 E-value=1.7 Score=26.16 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=19.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+..| ....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSRE-KSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHHT-TCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 48888888844 44567777653 4322 344555
No 219
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.21 E-value=2.3 Score=24.40 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=18.2
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHP 73 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~ 73 (227)
.|.|+.|+..| ....|..|+...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 59999999955 56778888444554
No 220
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.76 E-value=2.7 Score=23.63 Aligned_cols=23 Identities=17% Similarity=0.478 Sum_probs=17.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
..|.|++|+..| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 8 KPFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp CSEECSSSSCEESCHHHHHHHHHH
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 359999999955 56778888753
No 221
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.76 E-value=3.5 Score=24.24 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=16.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+..| ....|..|.. .|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQK-THSG 37 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHT-TSSS
T ss_pred CeeCCCCCCccCCHHHHHHHHH-HcCC
Confidence 48888888844 4566777865 3543
No 222
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=66.69 E-value=1.2 Score=39.55 Aligned_cols=42 Identities=21% Similarity=0.470 Sum_probs=24.9
Q ss_pred ceeeCCCCCCCccHHH---hhhhhcc-----cCCCCCCcccCCc--cccccc
Q 027149 48 YEYPCPFCSEDFDLVG---LCCHIDE-----EHPVEAKSGVCPV--CVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~---L~~H~~~-----eH~~e~~~vvCPV--C~~~~~ 89 (227)
..|.||.|..-|.... -|-|.-+ .+..+.....||| |...+.
T Consensus 180 ~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 180 IELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 6899999987433222 2444322 2222334578999 988654
No 223
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.24 E-value=2.8 Score=23.35 Aligned_cols=21 Identities=33% Similarity=0.634 Sum_probs=16.5
Q ss_pred eeeCCCCCCCcc-HHHhhhhhc
Q 027149 49 EYPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~ 69 (227)
.|.|++|+..|. ...|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 599999999654 567888875
No 224
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=69.53 E-value=1.2 Score=23.60 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=15.4
Q ss_pred eeeCCCCCCCcc-HHHhhhhhc
Q 027149 49 EYPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~ 69 (227)
.|.|++|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 489999999554 456777765
No 225
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.60 E-value=4.1 Score=22.80 Aligned_cols=23 Identities=22% Similarity=0.459 Sum_probs=16.8
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
..|.|+.|+..| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 8 LLYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 359999999944 45667788763
No 226
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.20 E-value=2.4 Score=22.41 Aligned_cols=21 Identities=29% Similarity=0.828 Sum_probs=15.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~ 69 (227)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 48999999955 4566777865
No 227
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=65.15 E-value=3.1 Score=25.77 Aligned_cols=24 Identities=25% Similarity=0.614 Sum_probs=19.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEH 72 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH 72 (227)
.|.|++|+..| ....|..|+...|
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 29 PYHCTYCNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred CccCCCCCchhcCHHHHHHHHHHhc
Confidence 59999999955 6788999987443
No 228
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.04 E-value=4.4 Score=23.41 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=18.7
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+..| ....|..|.. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIR-VHTG 36 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGG-GTSC
T ss_pred CeeCCCccchhCCHHHHHHHHH-HhCC
Confidence 59999999955 4577888976 4543
No 229
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.81 E-value=3.7 Score=28.42 Aligned_cols=43 Identities=26% Similarity=0.502 Sum_probs=24.9
Q ss_pred ceeeCCCCCCCccH----H-Hh-hhhhcccCCC------CCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDL----V-GL-CCHIDEEHPV------EAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~----~-~L-~~H~~~eH~~------e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.|.. . .| |.|.-=..+. ......||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 57899999997765 2 11 3332111111 1235789999887654
No 230
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.65 E-value=2 Score=24.31 Aligned_cols=22 Identities=32% Similarity=0.770 Sum_probs=16.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
.|.|++|+..| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 59999999944 55678888764
No 231
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=64.54 E-value=1.6 Score=32.78 Aligned_cols=42 Identities=31% Similarity=0.459 Sum_probs=25.6
Q ss_pred ceeeCCCCCCCc-cHHHh--hhhhcccCCCCCC-cccCCccccccc
Q 027149 48 YEYPCPFCSEDF-DLVGL--CCHIDEEHPVEAK-SGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L--~~H~~~eH~~e~~-~vvCPVC~~~~~ 89 (227)
..+.||.|.+.| +...| |-|.-=..+.... ...||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 579999999844 43444 5554333333221 157999987654
No 232
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.06 E-value=2.3 Score=28.84 Aligned_cols=46 Identities=20% Similarity=0.321 Sum_probs=26.8
Q ss_pred ceeeCCCCCCCccHH-Hh-hhhhcccCCC---CCCcccCCccccccchhhH
Q 027149 48 YEYPCPFCSEDFDLV-GL-CCHIDEEHPV---EAKSGVCPVCVTRVTMDMV 93 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~-~L-~~H~~~eH~~---e~~~vvCPVC~~~~~~d~i 93 (227)
..+.||.|.+.+... .| |.|.-=..+. -.....||+|...+..+.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 468999999854432 22 5553211111 1233689999988876544
No 233
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.02 E-value=3.7 Score=22.83 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=17.1
Q ss_pred ceeeCCCCCCCcc-HHHhhhhhc
Q 027149 48 YEYPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e~~d-~~~L~~H~~ 69 (227)
..|.|+.|+..|. ...|..|..
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHHHHH
Confidence 3599999999664 567888875
No 234
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.68 E-value=1.3 Score=30.65 Aligned_cols=41 Identities=27% Similarity=0.460 Sum_probs=24.3
Q ss_pred ceeeCCCCCC-CccHHHh-hhhh-cccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L-~~H~-~~eH~~e~~~vvCPVC~~~~~ 89 (227)
....|+.|.+ .-++.-| |-|. -=..+.. +...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQ 57 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchh
Confidence 4578999988 5554433 4454 1111221 3468999988664
No 235
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=63.67 E-value=1.6 Score=31.57 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=13.6
Q ss_pred hhhHhhhhcccccccc
Q 027149 90 MDMVDHITTQHGNISN 105 (227)
Q Consensus 90 ~d~i~Hl~~qH~~~~K 105 (227)
.||.+||...|...++
T Consensus 46 SnL~rHL~~~H~~e~~ 61 (73)
T 2ct5_A 46 SNLSYHLEKNHPEEFC 61 (73)
T ss_dssp HHHHHHHHHSCHHHHH
T ss_pred HhHHHHHHHHCHHHHH
Confidence 6999999999987665
No 236
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=62.96 E-value=3.9 Score=22.86 Aligned_cols=20 Identities=35% Similarity=0.750 Sum_probs=14.6
Q ss_pred eeCCCCCCCc-cHHHhhhhhc
Q 027149 50 YPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 50 F~CPfC~e~~-d~~~L~~H~~ 69 (227)
|.|+.|+..| ....|..|+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 7888888854 5566777765
No 237
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=62.83 E-value=2 Score=31.15 Aligned_cols=10 Identities=40% Similarity=1.242 Sum_probs=9.3
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..|.||||+.
T Consensus 25 ~ky~C~fCgk 34 (72)
T 3jyw_9 25 ARYDCSFCGK 34 (72)
T ss_dssp SCBCCSSCCS
T ss_pred cCccCCCCCC
Confidence 7899999998
No 238
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.72 E-value=4.1 Score=23.98 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=14.1
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
.|.|++|+..| ....|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT 34 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHhHh
Confidence 47788887743 34566677653
No 239
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=62.70 E-value=5.4 Score=27.41 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=23.4
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
...|+||+..+-...|-.|.+ + -....+.||
T Consensus 44 ~v~C~~C~~~~~~~~l~~H~~-~--Cp~~~v~C~ 74 (76)
T 2yuc_A 44 RLKCEFCGCDFSGEAYESHEG-M--CPQESSGPS 74 (76)
T ss_dssp CCCCSSSCCCCCHHHHHHTTT-S--CTTSSCCCS
T ss_pred ceECCCCCCccCHHHHHHHHh-H--CCCCccCCC
Confidence 689999999999999999974 2 223345565
No 240
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=62.60 E-value=1.1 Score=32.34 Aligned_cols=43 Identities=26% Similarity=0.463 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHH-Hh--hhhhcccCCC---CCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLV-GL--CCHIDEEHPV---EAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~-~L--~~H~~~eH~~---e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+... .+ |.|.-=..+. -.....||+|...+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 579999999965543 33 5553211111 0124689999887663
No 241
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=62.53 E-value=2.9 Score=26.85 Aligned_cols=22 Identities=23% Similarity=0.452 Sum_probs=18.7
Q ss_pred ceeeCCCCCCCccHHHhhhhhc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~ 69 (227)
..|.||-|++.|.+...-+|.+
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 5799999999888888888865
No 242
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=66.47 E-value=1.6 Score=23.20 Aligned_cols=21 Identities=24% Similarity=0.654 Sum_probs=15.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~ 69 (227)
.|.|++|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 37899999855 4466777765
No 243
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=62.35 E-value=1 Score=32.46 Aligned_cols=42 Identities=33% Similarity=0.612 Sum_probs=23.5
Q ss_pred ceeeCCCCCCCccHH-----HhhhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLV-----GLCCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~-----~L~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
....||.|.++|... --|.|.-=.++.. .++..||+|...+.
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 458899998765431 1155532111111 13458999987654
No 244
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.02 E-value=5.1 Score=23.64 Aligned_cols=22 Identities=23% Similarity=0.218 Sum_probs=15.6
Q ss_pred eeeCCCCCCCcc-HHHhhhhhcc
Q 027149 49 EYPCPFCSEDFD-LVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~~ 70 (227)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 488888888554 5567778653
No 245
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=61.98 E-value=3 Score=27.23 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=20.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+..| ....|..|+...|.-
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 49999999954 678899999876653
No 246
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=65.93 E-value=1.7 Score=22.65 Aligned_cols=21 Identities=33% Similarity=0.611 Sum_probs=14.9
Q ss_pred eeeCCCCCCCcc-HHHhhhhhc
Q 027149 49 EYPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~ 69 (227)
.|.|+.|+..|. ...|..|..
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 388999998665 466777754
No 247
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=61.78 E-value=2.3 Score=31.40 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=18.5
Q ss_pred ceeeCCCCCCC--ccHHHhhhhhcccCCCCCCcccCCccccc
Q 027149 48 YEYPCPFCSED--FDLVGLCCHIDEEHPVEAKSGVCPVCVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e~--~d~~~L~~H~~~eH~~e~~~vvCPVC~~~ 87 (227)
..|+|||||.+ ++.. .....||-|-..
T Consensus 26 ~~y~Cp~CG~~~v~r~a-------------tGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG-------------TGIWQCSYCDYK 54 (83)
T ss_dssp SCEECSSSCCEEEEEEE-------------TTEEEETTTCCE
T ss_pred ccCcCCCCCCcceeccC-------------CCeEECCCCCCE
Confidence 67999999983 2221 235779999764
No 248
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.73 E-value=2.1 Score=31.84 Aligned_cols=10 Identities=30% Similarity=0.962 Sum_probs=9.3
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..|.||||+.
T Consensus 34 ~ky~CpfCGk 43 (83)
T 3j21_i 34 QKHTCPVCGR 43 (83)
T ss_dssp SCBCCSSSCS
T ss_pred cccCCCCCCC
Confidence 7899999998
No 249
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.49 E-value=5 Score=23.19 Aligned_cols=25 Identities=28% Similarity=0.460 Sum_probs=18.6
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+..| ....|..|.. .|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 35 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHER-IHTG 35 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGG-GCCC
T ss_pred CeECCCCCCCcCCHHHHHHHHH-HhCC
Confidence 59999999955 5567888976 4543
No 250
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=61.19 E-value=2.5 Score=32.73 Aligned_cols=12 Identities=42% Similarity=1.226 Sum_probs=10.2
Q ss_pred ceeeCCCCCC-Cc
Q 027149 48 YEYPCPFCSE-DF 59 (227)
Q Consensus 48 ~~F~CPfC~e-~~ 59 (227)
..|.||||+. .+
T Consensus 35 aky~CpfCgk~~v 47 (103)
T 4a17_Y 35 AKYGCPFCGKVAV 47 (103)
T ss_dssp SCEECTTTCCEEE
T ss_pred cCCCCCCCCCcee
Confidence 7899999998 53
No 251
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=60.60 E-value=2.4 Score=32.18 Aligned_cols=10 Identities=40% Similarity=1.145 Sum_probs=9.3
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..|.||||+.
T Consensus 35 ~ky~CpfCgk 44 (92)
T 3iz5_m 35 SKYFCEFCGK 44 (92)
T ss_dssp SCBCCTTTCS
T ss_pred ccccCcccCC
Confidence 7899999998
No 252
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=59.83 E-value=1.5 Score=32.26 Aligned_cols=41 Identities=27% Similarity=0.494 Sum_probs=24.5
Q ss_pred ceeeCCCCCCCcc-HHHh--hhhh-----cccCCCCCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFD-LVGL--CCHI-----DEEHPVEAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d-~~~L--~~H~-----~~eH~~e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+. ...+ |.|. ...+- . ....||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~-~-~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL-E-TSKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHH-T-SCSBCTTTCCBSCS
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHH-H-hCCcCcCCCccccc
Confidence 5689999988543 3333 4442 22221 1 23789999887653
No 253
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=59.77 E-value=2.3 Score=32.23 Aligned_cols=12 Identities=33% Similarity=1.038 Sum_probs=10.1
Q ss_pred ceeeCCCCCC-Cc
Q 027149 48 YEYPCPFCSE-DF 59 (227)
Q Consensus 48 ~~F~CPfC~e-~~ 59 (227)
..|.||||+. .+
T Consensus 35 ~ky~CpfCgk~~v 47 (92)
T 3izc_m 35 ARYDCSFCGKKTV 47 (92)
T ss_dssp SCCCCSSSCSSCC
T ss_pred cCCcCCCCCCcee
Confidence 7899999998 43
No 254
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.56 E-value=4.7 Score=27.29 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=18.5
Q ss_pred ceeeCCCCCCCcc-HHHhhhhhc
Q 027149 48 YEYPCPFCSEDFD-LVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e~~d-~~~L~~H~~ 69 (227)
-.|.||-|+..|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 3699999999887 778888876
No 255
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=59.48 E-value=2.7 Score=30.54 Aligned_cols=13 Identities=31% Similarity=0.935 Sum_probs=10.7
Q ss_pred ceeeCCCCCC-Ccc
Q 027149 48 YEYPCPFCSE-DFD 60 (227)
Q Consensus 48 ~~F~CPfC~e-~~d 60 (227)
..|.||||+. .+.
T Consensus 26 ~ky~C~fCgk~~vk 39 (73)
T 1ffk_W 26 KKYKCPVCGFPKLK 39 (73)
T ss_pred cCccCCCCCCceeE
Confidence 7899999998 544
No 256
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=59.26 E-value=5.1 Score=22.98 Aligned_cols=25 Identities=32% Similarity=0.785 Sum_probs=18.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|+.|+..| ....|..|.. .|..
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 31 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMN-VHRR 31 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-TTCC
T ss_pred ceECCCCCcccCCHHHHHHHHH-HcCC
Confidence 59999999955 5577888876 3543
No 257
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=59.10 E-value=3.3 Score=30.21 Aligned_cols=21 Identities=29% Similarity=0.714 Sum_probs=17.9
Q ss_pred eeeCCCCCCCccHHHhhhhhc
Q 027149 49 EYPCPFCSEDFDLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~ 69 (227)
.=-||||+--+.-.+|..|+-
T Consensus 30 ~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHHT
T ss_pred cccChhhhccCCccchhhhcc
Confidence 347999999999999999964
No 258
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=58.74 E-value=2.8 Score=31.01 Aligned_cols=42 Identities=31% Similarity=0.452 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHH--Hhhhh-----hcccCCCCCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLV--GLCCH-----IDEEHPVEAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~--~L~~H-----~~~eH~~e~~~vvCPVC~~~~~~ 90 (227)
..|.||.|.+.+... --|.| |...+. ......||+|...+..
T Consensus 14 ~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 468999998854422 12444 332222 2335789999987753
No 259
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=58.12 E-value=1.2 Score=32.51 Aligned_cols=43 Identities=26% Similarity=0.433 Sum_probs=24.0
Q ss_pred ceeeCCCCCCCccHHH--hhhhhc-----ccCCCC-CCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHID-----EEHPVE-AKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~~-----~eH~~e-~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+.... -|.|.- ..+-.. .....||+|...+..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 5689999988554321 244421 111111 223589999887653
No 260
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=58.08 E-value=6.4 Score=26.50 Aligned_cols=12 Identities=33% Similarity=1.018 Sum_probs=7.0
Q ss_pred eeeCCCCCCCcc
Q 027149 49 EYPCPFCSEDFD 60 (227)
Q Consensus 49 ~F~CPfC~e~~d 60 (227)
.|.|+.||--+|
T Consensus 3 ~y~C~~CGyvYd 14 (52)
T 1e8j_A 3 IYVCTVCGYEYD 14 (52)
T ss_dssp CEECSSSCCCCC
T ss_pred cEEeCCCCeEEc
Confidence 466777765443
No 261
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=58.01 E-value=2.9 Score=37.97 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=23.1
Q ss_pred cceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccc-cccchhhHh
Q 027149 47 EYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCV-TRVTMDMVD 94 (227)
Q Consensus 47 ~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~-~~~~~d~i~ 94 (227)
.+...|||||.-+.. +-+.-+||||- ..||.+-+|
T Consensus 276 ~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~G 311 (320)
T 3mkr_B 276 KPVEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVIG 311 (320)
T ss_dssp SCCEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCCC
T ss_pred CCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCcccC
Confidence 356699999985421 22456999994 477766554
No 262
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=57.85 E-value=5 Score=22.16 Aligned_cols=24 Identities=29% Similarity=0.620 Sum_probs=15.7
Q ss_pred eeCCCCCCCccH-HHhhhhhcccCCC
Q 027149 50 YPCPFCSEDFDL-VGLCCHIDEEHPV 74 (227)
Q Consensus 50 F~CPfC~e~~d~-~~L~~H~~~eH~~ 74 (227)
|.|+.|+..|.. ..|..|.. .|..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 27 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIK-TAFI 27 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTT-SSSS
T ss_pred CCCCCCCcccCCHHHHHHHHH-HHcc
Confidence 788888886654 45666764 3443
No 263
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=57.65 E-value=3.6 Score=37.52 Aligned_cols=35 Identities=6% Similarity=0.175 Sum_probs=22.6
Q ss_pred CcceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccc-cccchhhH
Q 027149 46 GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCV-TRVTMDMV 93 (227)
Q Consensus 46 ~~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~-~~~~~d~i 93 (227)
|.+...|||||.-+.. +-+.-+||||- ..||.+.+
T Consensus 284 g~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a~ 319 (325)
T 3mv2_A 284 DTPSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPAS 319 (325)
T ss_dssp SSCEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCCC
T ss_pred CCCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCcc
Confidence 3466789999985422 12356999994 46665544
No 264
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.44 E-value=6 Score=23.36 Aligned_cols=25 Identities=28% Similarity=0.393 Sum_probs=18.8
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+..| ....|..|... |..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~ 37 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT-HAG 37 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS
T ss_pred CeECCCCCcccCchHHHHHHHhH-hcC
Confidence 59999999955 56788889764 543
No 265
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.42 E-value=1.1 Score=30.49 Aligned_cols=42 Identities=29% Similarity=0.509 Sum_probs=22.9
Q ss_pred ceeeCCCCCCCccHHH-----hhhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG-----LCCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~-----L~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 4578999998764322 244532111111 12348999977653
No 266
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.10 E-value=6.5 Score=22.78 Aligned_cols=26 Identities=35% Similarity=0.696 Sum_probs=19.0
Q ss_pred ceeeCCCCCCCcc-HHHhhhhhcccCCC
Q 027149 48 YEYPCPFCSEDFD-LVGLCCHIDEEHPV 74 (227)
Q Consensus 48 ~~F~CPfC~e~~d-~~~L~~H~~~eH~~ 74 (227)
..|.|+.|+..|. ...|..|+. .|..
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQTLKSHLR-IHTG 36 (42)
T ss_dssp CCBCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred CCEECCCCCCccCCHHHHHHHHH-hcCC
Confidence 3599999999555 577888976 4543
No 267
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.06 E-value=0.73 Score=31.54 Aligned_cols=42 Identities=21% Similarity=0.329 Sum_probs=24.4
Q ss_pred ceeeCCCCCCCcc-HHHh--hhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFD-LVGL--CCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d-~~~L--~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.+. ...| |-|.-=..+.. .....||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVH 61 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccC
Confidence 6799999998654 3333 55522111110 11467999988765
No 268
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=56.80 E-value=4.3 Score=34.05 Aligned_cols=25 Identities=28% Similarity=0.677 Sum_probs=18.2
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.|+.||--++ + ..+-+||+|..
T Consensus 170 ~~~~C~~CG~i~~--g------------~~p~~CP~C~~ 194 (202)
T 1yuz_A 170 KFHLCPICGYIHK--G------------EDFEKCPICFR 194 (202)
T ss_dssp CEEECSSSCCEEE--S------------SCCSBCTTTCC
T ss_pred cEEEECCCCCEEc--C------------cCCCCCCCCCC
Confidence 4799999998555 1 12379999965
No 269
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.70 E-value=1.6 Score=28.84 Aligned_cols=41 Identities=20% Similarity=0.636 Sum_probs=23.7
Q ss_pred ceeeCCCCCCCccHH---------HhhhhhcccCCCC---CCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVE---AKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~---------~L~~H~~~eH~~e---~~~vvCPVC~~~~ 88 (227)
..+.||.|.+.+... .-|.|.-=..+.. .+...||+|...+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 66 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCcc
Confidence 568999999977654 1244432111111 1245799997755
No 270
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=56.56 E-value=3.2 Score=32.73 Aligned_cols=29 Identities=28% Similarity=0.570 Sum_probs=19.4
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCcccccc
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~ 88 (227)
..|.|||||. .+-..+ ...-.|+-|-..+
T Consensus 59 akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp SCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred cCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 7899999998 544332 1345688886653
No 271
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.53 E-value=6 Score=22.86 Aligned_cols=24 Identities=29% Similarity=0.643 Sum_probs=18.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHP 73 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~ 73 (227)
.|.|++|+..| ....|..|.. .|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 35 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHT 35 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHH
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcC
Confidence 59999999954 5677888876 443
No 272
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=54.93 E-value=0.96 Score=33.45 Aligned_cols=12 Identities=25% Similarity=0.672 Sum_probs=9.1
Q ss_pred eeCCCCCCCccH
Q 027149 50 YPCPFCSEDFDL 61 (227)
Q Consensus 50 F~CPfC~e~~d~ 61 (227)
..||.|-+.|..
T Consensus 26 ~~C~ICl~~~~~ 37 (114)
T 1v87_A 26 EDCIICMEKLAV 37 (114)
T ss_dssp CEETTTTEETTS
T ss_pred CcCccCChhhcC
Confidence 579999887644
No 273
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=54.77 E-value=1.1 Score=32.82 Aligned_cols=42 Identities=19% Similarity=0.448 Sum_probs=24.5
Q ss_pred ceeeCCCCCCCccHHHh---hhhhcccCCC----CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVGL---CCHIDEEHPV----EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L---~~H~~~eH~~----e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|..... |.|.-=..+. ......||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 67999999996654333 4442111111 111268999988765
No 274
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=54.76 E-value=2.2 Score=30.69 Aligned_cols=49 Identities=14% Similarity=0.386 Sum_probs=30.5
Q ss_pred ceeeCCCCCCCccHHHh-----hhh-----hcccCCC----C--CCcccCCc--cccc--cchhhHhhh
Q 027149 48 YEYPCPFCSEDFDLVGL-----CCH-----IDEEHPV----E--AKSGVCPV--CVTR--VTMDMVDHI 96 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L-----~~H-----~~~eH~~----e--~~~vvCPV--C~~~--~~~d~i~Hl 96 (227)
..|.||.|.+.+..... |.| |-..|-. + ...+.||. |... +..+.+..+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 46899999987765432 555 2222211 1 13578999 9888 776666544
No 275
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=54.17 E-value=1.2 Score=35.35 Aligned_cols=42 Identities=21% Similarity=0.505 Sum_probs=25.4
Q ss_pred ceeeCCCCCCCccHH-Hh--hhhhcccCCC----CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLV-GL--CCHIDEEHPV----EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~-~L--~~H~~~eH~~----e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|... .+ |-|.--..+. ......||+|...+.
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 679999998855543 22 4453222221 223578999988763
No 276
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.13 E-value=4.9 Score=26.39 Aligned_cols=22 Identities=32% Similarity=0.569 Sum_probs=18.0
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
.|.|++|+..| ....|..|+..
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~ 64 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRI 64 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHh
Confidence 59999999954 56789999874
No 277
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=53.54 E-value=6 Score=29.21 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=20.6
Q ss_pred ceeeCCCCCCCccHHH--hhhhhcccCCCCCCc--ccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHIDEEHPVEAKS--GVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~~~eH~~e~~~--vvCPVC~~ 86 (227)
..|.|+.||--+|... -..=+.---+++.-. -+||+|.+
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 68 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA 68 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 4799999997554321 111111112233323 38999977
No 278
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=53.25 E-value=2.4 Score=33.59 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=24.7
Q ss_pred ceeeCCCCCCCccHHH--hhhh-----hcccCCCCCCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLVG--LCCH-----IDEEHPVEAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H-----~~~eH~~e~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.|.... -|-| |...+- ......||+|...+..
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVCKDCLQRSF-KAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCT
T ss_pred cCCEeecCChhhcCCEEcCCCCchhHHHHHHHH-HhCCCcCCCCCccCCC
Confidence 6799999988554322 2333 222221 1234589999887654
No 279
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.67 E-value=4 Score=30.26 Aligned_cols=38 Identities=21% Similarity=0.141 Sum_probs=28.4
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.|+.|+..| ....|..|....|..+ ++-.|.+|-.
T Consensus 49 kpf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~ 87 (102)
T 2ghf_A 49 SSYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKR 87 (102)
T ss_dssp CCEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCC
T ss_pred CCcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccC
Confidence 359999999955 5678999955577654 5678988654
No 280
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=52.64 E-value=6.6 Score=26.79 Aligned_cols=9 Identities=33% Similarity=1.110 Sum_probs=5.0
Q ss_pred eeeCCCCCC
Q 027149 49 EYPCPFCSE 57 (227)
Q Consensus 49 ~F~CPfC~e 57 (227)
.|.|+.||-
T Consensus 3 ~y~C~vCGy 11 (54)
T 4rxn_A 3 KYTCTVCGY 11 (54)
T ss_dssp CEEETTTCC
T ss_pred ceECCCCCe
Confidence 355666654
No 281
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=52.62 E-value=5.4 Score=28.48 Aligned_cols=13 Identities=23% Similarity=0.677 Sum_probs=9.5
Q ss_pred ceeeCCCCCCCcc
Q 027149 48 YEYPCPFCSEDFD 60 (227)
Q Consensus 48 ~~F~CPfC~e~~d 60 (227)
..|.|+.||--+|
T Consensus 6 ~~y~C~vCGyiYd 18 (70)
T 1dx8_A 6 GKYECEACGYIYE 18 (70)
T ss_dssp SCEEETTTCCEEC
T ss_pred ceEEeCCCCEEEc
Confidence 4689999986444
No 282
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=52.36 E-value=3 Score=35.54 Aligned_cols=39 Identities=26% Similarity=0.506 Sum_probs=26.5
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCC-CCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHP-VEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~-~e~~~vvCPVC~~~~~ 89 (227)
-.|.||.|+..+...++.. .... ....-..||-|...++
T Consensus 21 l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~ 60 (206)
T 3flo_B 21 LELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFT 60 (206)
T ss_dssp EEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCC
T ss_pred eEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCC
Confidence 4799999998666666643 1111 3445678999988765
No 283
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.28 E-value=7.9 Score=25.61 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=19.5
Q ss_pred eeeCCCCCCC-ccHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSED-FDLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~-~d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+.. .....|..|+.. |..
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~-H~~ 71 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRV-HTG 71 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-SCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC
Confidence 5999999994 466789999874 543
No 284
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=51.80 E-value=7.1 Score=22.46 Aligned_cols=26 Identities=23% Similarity=0.423 Sum_probs=19.0
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
..|.|++|+..| ....|..|.. .|..
T Consensus 10 ~~~~C~~C~k~f~~~~~l~~H~~-~H~~ 36 (42)
T 2epc_A 10 TPYLCGQCGKSFTQRGSLAVHQR-SCSQ 36 (42)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH-HTTC
T ss_pred CCeECCCCCcccCCHHHHHHHhh-hcCC
Confidence 359999999955 5677888876 3443
No 285
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.60 E-value=4.3 Score=27.93 Aligned_cols=22 Identities=18% Similarity=0.267 Sum_probs=19.8
Q ss_pred ceeeCCCCCCCccHHHhhhhhc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~ 69 (227)
..|.||+|+..|-...|-.|..
T Consensus 42 ~~~~C~~C~~~~~~~~l~~H~~ 63 (75)
T 2d9k_A 42 RTELCGNCGRNVLVKDLKTHPE 63 (75)
T ss_dssp CEEECSSSCCEEETTGGGTHHH
T ss_pred CceEcccCCCcCcHHHHHHHHH
Confidence 4699999999888999999986
No 286
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=51.41 E-value=1.2 Score=29.94 Aligned_cols=42 Identities=19% Similarity=0.625 Sum_probs=24.0
Q ss_pred ceeeCCCCCCCccHH---------HhhhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~---------~L~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.+... .-|.|.-=..+.. .+...||+|...+.
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 62 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccC
Confidence 458899999977653 1244421111110 12358999988765
No 287
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=51.05 E-value=6.8 Score=23.46 Aligned_cols=22 Identities=27% Similarity=0.510 Sum_probs=13.7
Q ss_pred ceeeCCCCCC-CccHHHhhhhhc
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~ 69 (227)
+.|.||.|.. -=|...|..|.+
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHHH
Confidence 3567777766 556666666654
No 288
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.94 E-value=6.1 Score=23.41 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=21.1
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 82 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCP 82 (227)
.|.|++|+..| ....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~ 44 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS-HERT-DPSGPS 44 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-HHHS-CCSSCS
T ss_pred CeeCcccChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 59999999955 56778888753 4322 334454
No 289
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=50.51 E-value=9.7 Score=25.39 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=20.4
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVE 75 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e 75 (227)
.|.|+.|+..| ....|..|+. .|..+
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~-~Htge 58 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLK-VHQNK 58 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGG-GGSCC
T ss_pred CeECCCCCCCcCCHHHHHHHhC-ccCCC
Confidence 59999999954 5678999976 57654
No 290
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=50.28 E-value=0.99 Score=29.49 Aligned_cols=43 Identities=19% Similarity=0.600 Sum_probs=25.1
Q ss_pred ceeeCCCCCCCccHH---------HhhhhhcccCCCC---CCcccCCccccccch
Q 027149 48 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVE---AKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~---------~L~~H~~~eH~~e---~~~vvCPVC~~~~~~ 90 (227)
..+.||.|.+.+... .-|.|.-=..+.. .+...||+|...+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 458899999977653 2244532111111 124589999887653
No 291
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=50.09 E-value=3.5 Score=28.55 Aligned_cols=41 Identities=29% Similarity=0.592 Sum_probs=23.0
Q ss_pred ceeeCCCCCCCc-cHHHh-hhhh-cccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDF-DLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L-~~H~-~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.+ +...| |.|. -=..+.. +...||+|...+.
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~ 66 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAE-AVDKCPMCYTVIT 66 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTCCBCCCHHHHT-TCSBCTTTCCBCS
T ss_pred cCCCCCCCCCCCCCEEEcCCCChhHHHHhhh-cCccCCCcCcCcc
Confidence 578999999844 43331 3343 1111111 1178999988664
No 292
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=49.99 E-value=6.3 Score=30.03 Aligned_cols=27 Identities=33% Similarity=0.566 Sum_probs=20.4
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcc-cCCccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSG-VCPVCVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~v-vCPVC~~~ 87 (227)
..|.|+-||..|... .... .||.|...
T Consensus 72 ~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 579999999977762 2346 89999664
No 293
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=49.82 E-value=5.8 Score=27.00 Aligned_cols=9 Identities=22% Similarity=0.848 Sum_probs=5.2
Q ss_pred eeeCCCCCC
Q 027149 49 EYPCPFCSE 57 (227)
Q Consensus 49 ~F~CPfC~e 57 (227)
.|.|+.||-
T Consensus 3 ~y~C~~CGy 11 (55)
T 2v3b_B 3 KWQCVVCGF 11 (55)
T ss_dssp EEEETTTCC
T ss_pred cEEeCCCCe
Confidence 456666654
No 294
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=49.64 E-value=9.9 Score=26.17 Aligned_cols=35 Identities=29% Similarity=0.315 Sum_probs=23.3
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
-|.|+.|++.| ....|..|... |..+ ...|-+|..
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg~--~~~~~~~~~ 48 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGVT--SLQLGYIDL 48 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTTT--SCCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCCC--ccccccccC
Confidence 59999999955 45678888774 5443 345555544
No 295
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.38 E-value=5.8 Score=27.99 Aligned_cols=26 Identities=31% Similarity=0.645 Sum_probs=20.9
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~ 74 (227)
.|.|++|+..| ....|..|+...|..
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 59999999955 567899999876643
No 296
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=49.15 E-value=8.2 Score=23.96 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=17.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
..|.|+.|+..| ....|..|...
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 359999999955 56778888763
No 297
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=47.71 E-value=2.4 Score=32.69 Aligned_cols=42 Identities=31% Similarity=0.544 Sum_probs=23.6
Q ss_pred ceeeCCCCCCCccH-HHh-hhhhcccCCC---CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDL-VGL-CCHIDEEHPV---EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~-~~L-~~H~~~eH~~---e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.|.. ..| |.|.-=..+. -.+...||+|...+.
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred ccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 46889999984433 322 4442211111 123467999987654
No 298
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=46.97 E-value=4.2 Score=30.93 Aligned_cols=22 Identities=23% Similarity=0.313 Sum_probs=14.7
Q ss_pred ceeeCCCCCCCccHHH-hhhhhc
Q 027149 48 YEYPCPFCSEDFDLVG-LCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~-L~~H~~ 69 (227)
..+.|+||+..++... -+.|+.
T Consensus 34 ~~~~C~yCg~~~~~~~~~vDHIi 56 (112)
T 2qgp_A 34 ARGICHYCGEIFPPEELTMDHLV 56 (112)
T ss_dssp HHTBCTTTCCBCCGGGEEEEESS
T ss_pred cCCcCCCCCCcCCCCCcEEEEEe
Confidence 4589999999776433 245554
No 299
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=46.94 E-value=6.4 Score=33.71 Aligned_cols=28 Identities=29% Similarity=0.510 Sum_probs=23.9
Q ss_pred ccCcceeeCCCCCCCccHHHhhhhhcccCCC
Q 027149 44 VKGEYEYPCPFCSEDFDLVGLCCHIDEEHPV 74 (227)
Q Consensus 44 ~r~~~~F~CPfC~e~~d~~~L~~H~~~eH~~ 74 (227)
.| +-|.|-.||+-+|+..|..|+. .|--
T Consensus 151 FW--QFYKCe~CgKYvDId~~~~Hlk-~Hg~ 178 (226)
T 2czr_A 151 FW--QFYKCEECGKYVDIENLEAHLR-EHGI 178 (226)
T ss_dssp EE--EEEECTTTCCEEEGGGHHHHHH-TTTC
T ss_pred EE--EEEehhhcCceecHHHHHHHHH-HcCc
Confidence 46 8899999999999999999987 4443
No 300
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=44.88 E-value=15 Score=19.44 Aligned_cols=21 Identities=24% Similarity=0.572 Sum_probs=15.6
Q ss_pred eeCC--CCCCCc-cHHHhhhhhcc
Q 027149 50 YPCP--FCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 50 F~CP--fC~e~~-d~~~L~~H~~~ 70 (227)
|.|+ .|+..| ....|..|...
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 7887 899955 56678888763
No 301
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=42.46 E-value=12 Score=26.38 Aligned_cols=29 Identities=24% Similarity=0.434 Sum_probs=21.9
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~ 88 (227)
-.|.|.-|+.++++. ....+.||-|..+|
T Consensus 20 v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 469999999988744 13468999996654
No 302
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=42.13 E-value=5.2 Score=29.60 Aligned_cols=45 Identities=16% Similarity=0.263 Sum_probs=25.0
Q ss_pred ccCcceeeCCCCCCCccHHH--hhhhhcccCCC----CCCcccCCccccccch
Q 027149 44 VKGEYEYPCPFCSEDFDLVG--LCCHIDEEHPV----EAKSGVCPVCVTRVTM 90 (227)
Q Consensus 44 ~r~~~~F~CPfC~e~~d~~~--L~~H~~~eH~~----e~~~vvCPVC~~~~~~ 90 (227)
+. ..|.||.|.+.+.... -|.|.-=..+. ......||+|...+..
T Consensus 20 ~~--~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 20 FV--KSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HH--HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cc--CCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 55 6799999988554322 13332111010 1124579999887653
No 303
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.79 E-value=7 Score=22.89 Aligned_cols=23 Identities=26% Similarity=0.521 Sum_probs=17.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhhcc
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~~~ 70 (227)
..|.|+.|+..| ....|..|...
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 11 KSYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CCEEETTTTEEESSSHHHHTTHHH
T ss_pred CCeECcccCcccCCHHHHHHHHHH
Confidence 359999999944 56778888764
No 304
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=41.43 E-value=7.2 Score=28.98 Aligned_cols=12 Identities=25% Similarity=0.766 Sum_probs=9.2
Q ss_pred eeCCCCCCCccH
Q 027149 50 YPCPFCSEDFDL 61 (227)
Q Consensus 50 F~CPfC~e~~d~ 61 (227)
=+||.||-.++.
T Consensus 48 ~~CPvCgs~l~~ 59 (112)
T 1l8d_A 48 GKCPVCGRELTD 59 (112)
T ss_dssp EECTTTCCEECH
T ss_pred CCCCCCCCcCCH
Confidence 479999987663
No 305
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.25 E-value=2.8 Score=28.67 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=24.5
Q ss_pred ceeeCCCCCCCccHH----Hh-hhhhcccCCCC---CCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLV----GL-CCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~----~L-~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
....||.|.+.|... .| |.|.-=.++.. .++..||+|...+.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 347899999866543 22 66653222221 12357999977654
No 306
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=40.90 E-value=9.8 Score=27.92 Aligned_cols=37 Identities=16% Similarity=0.454 Sum_probs=25.1
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
....||.|...++...+..- ........||||-..+.
T Consensus 47 ~~~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 47 NANTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYS 83 (133)
T ss_dssp TCSBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHH
T ss_pred hCCCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCccc
Confidence 34689999998876655332 22455678999977543
No 307
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=39.19 E-value=11 Score=32.09 Aligned_cols=24 Identities=33% Similarity=0.627 Sum_probs=20.8
Q ss_pred ceeeCCCCCCCc--cHHHhhhhhccc
Q 027149 48 YEYPCPFCSEDF--DLVGLCCHIDEE 71 (227)
Q Consensus 48 ~~F~CPfC~e~~--d~~~L~~H~~~e 71 (227)
..+.|..|+.+| .+..|-.|++++
T Consensus 168 ~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 168 EDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp SCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCceeCCCCchhhcccHHHHHHHHHH
Confidence 578999999987 399999999865
No 308
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.10 E-value=15 Score=26.25 Aligned_cols=26 Identities=23% Similarity=0.648 Sum_probs=20.6
Q ss_pred eeeCCCCCCCcc-HHHhhhhhcccCCC
Q 027149 49 EYPCPFCSEDFD-LVGLCCHIDEEHPV 74 (227)
Q Consensus 49 ~F~CPfC~e~~d-~~~L~~H~~~eH~~ 74 (227)
.|.|+.|+..|. ...|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 599999999664 57899996667754
No 309
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=38.88 E-value=22 Score=27.84 Aligned_cols=48 Identities=21% Similarity=0.369 Sum_probs=35.7
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccccc-chhhHhhhhc
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-TMDMVDHITT 98 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~-~~d~i~Hl~~ 98 (227)
...||.|+..+....|..|...+= ..+.+.||.|...+ ..++..|..+
T Consensus 110 ~v~C~~C~~~~~r~~l~~H~~~~C--~~r~~~C~~C~~~~~~~~l~~H~~~ 158 (170)
T 3hcs_A 110 LMDCPQCQRPFQKFHINIHILKDC--PRRQVSCDNCAASMAFEDKEIHDQN 158 (170)
T ss_dssp EEECTTTCCEEEGGGHHHHHHHTC--TTCEEECTTTCCEEEGGGHHHHHTT
T ss_pred eeECCCCChHHHHHHHHHHhhhhC--CCCCeECCCCCCccCHHHHHhHHHh
Confidence 468999999889999999986433 34668899997754 4677777643
No 310
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=38.68 E-value=5.7 Score=25.77 Aligned_cols=35 Identities=20% Similarity=0.481 Sum_probs=22.0
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccchhhH
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMV 93 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~~d~i 93 (227)
..+.||.|+. .+.. + .+....||+.|-.-+..+.|
T Consensus 4 ~~~~CP~C~~~~l~~---------d--~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 4 KQKVCPACESAELIY---------D--PERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp SCCSCTTTSCCCEEE---------E--TTTTEEEESSSCCBCCCCCC
T ss_pred ccEeCcCCCCcceEE---------c--CCCCeEECcccCCccccccc
Confidence 4688999976 3311 1 13556899999765554443
No 311
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=38.64 E-value=7.2 Score=35.33 Aligned_cols=41 Identities=22% Similarity=0.552 Sum_probs=26.3
Q ss_pred ceeeCCCCCC-CccHHHh-hhhh-cccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L-~~H~-~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+ -.+...| |-|. -=..+... ...||+|...+.
T Consensus 294 ~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~ 337 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIK 337 (345)
T ss_dssp TTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCC
T ss_pred CCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCcc
Confidence 5789999999 4444443 6665 32333322 268999988664
No 312
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=38.07 E-value=16 Score=26.38 Aligned_cols=25 Identities=24% Similarity=0.559 Sum_probs=20.2
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCC
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHP 73 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~ 73 (227)
.|.|++|+..| ....|..|+...|.
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 49999999965 56779999887664
No 313
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=37.61 E-value=14 Score=37.83 Aligned_cols=34 Identities=24% Similarity=0.561 Sum_probs=22.8
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.||.||..|...+- . ...+.+..+.||.|.-
T Consensus 248 ~~~~c~~~~~~~~~~~~--~---~fsfn~p~g~C~~C~G 281 (916)
T 3pih_A 248 ENLMCPVCGIGFPEITP--K---LFSFNSPYGACPNCHG 281 (916)
T ss_dssp SSCBCTTTCCCCCCCSG--G---GGCTTSTTTBCTTTTT
T ss_pred ccccCcccCCccCCCCH--h---hcCCCCCCCcCCeeec
Confidence 56999999976543222 1 2245566799999965
No 314
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=36.51 E-value=20 Score=18.99 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=16.0
Q ss_pred eeeCC--CCCCCc-cHHHhhhhhcc
Q 027149 49 EYPCP--FCSEDF-DLVGLCCHIDE 70 (227)
Q Consensus 49 ~F~CP--fC~e~~-d~~~L~~H~~~ 70 (227)
.|.|+ .|+..| ....|..|...
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 48898 799955 45677888763
No 315
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=36.13 E-value=15 Score=21.85 Aligned_cols=19 Identities=26% Similarity=0.602 Sum_probs=10.8
Q ss_pred cccCCcccc-ccchhhHhhh
Q 027149 78 SGVCPVCVT-RVTMDMVDHI 96 (227)
Q Consensus 78 ~vvCPVC~~-~~~~d~i~Hl 96 (227)
.|-||||-. +|...+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 367999965 4434444443
No 316
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=36.12 E-value=12 Score=25.23 Aligned_cols=31 Identities=26% Similarity=0.485 Sum_probs=16.6
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccccc
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~ 88 (227)
.|.|=-||..|+..+|--- -.+.||+|--++
T Consensus 3 iY~C~rCg~~fs~~el~~l---------P~IrCpyCGyri 33 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVL---------PGVRCPYCGYKI 33 (48)
T ss_dssp --CCCCTTTTCCCCCSCCC---------SSSCCTTTCCSC
T ss_pred EEEeeccCCCccHHHHhhC---------CCcccCccCcEE
Confidence 5667777776666655211 235677775544
No 317
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=36.06 E-value=6.1 Score=29.48 Aligned_cols=42 Identities=21% Similarity=0.361 Sum_probs=23.4
Q ss_pred ceeeCCCCCCCccHHH--hhhhhcccCCC----CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLVG--LCCHIDEEHPV----EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~--L~~H~~~eH~~----e~~~vvCPVC~~~~~ 89 (227)
..|.||.|.+.+.... -|.|.-=..+. ......||+|...+.
T Consensus 17 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 64 (118)
T 3hct_A 17 SKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILL 64 (118)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCC
T ss_pred CCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcC
Confidence 6799999998554322 24442111111 112238999988765
No 318
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=35.95 E-value=12 Score=30.91 Aligned_cols=50 Identities=22% Similarity=0.469 Sum_probs=14.4
Q ss_pred eeeCCC----CCCCccHHHhhhhhcccCCCCCCcccCCc----cccccc--hhhHhhhhccccc
Q 027149 49 EYPCPF----CSEDFDLVGLCCHIDEEHPVEAKSGVCPV----CVTRVT--MDMVDHITTQHGN 102 (227)
Q Consensus 49 ~F~CPf----C~e~~d~~~L~~H~~~eH~~e~~~vvCPV----C~~~~~--~d~i~Hl~~qH~~ 102 (227)
.|+||| |.+-+.-.+...|-+ .-.-+.-.||+ |.- .| .++..|+...|+.
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~---~C~f~p~~Cp~~g~~C~~-~G~~~~l~~H~~~~H~~ 65 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEE---LCEFRPYSCPCPGASCKW-QGSLDAVMPHLMHQHKS 65 (193)
T ss_dssp ---------------------------------CEECCCC--CCCC-EECSTTHHHHHHHHCTT
T ss_pred EecCCCCCCCCCcccccccccchhh---cCCCCCccCCCCCCCCcC-CCCHHHHHHHHHHHCCC
Confidence 477777 666555555555532 11223445665 643 23 4777777777764
No 319
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=35.95 E-value=13 Score=22.50 Aligned_cols=21 Identities=24% Similarity=0.380 Sum_probs=16.5
Q ss_pred ceeeCCCCCCCc-cHHHhhhhh
Q 027149 48 YEYPCPFCSEDF-DLVGLCCHI 68 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L~~H~ 68 (227)
--|.|+.|++.| ....|..|.
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHH
T ss_pred cCeECCCCCCccCCHhHccCcC
Confidence 359999999955 467788886
No 320
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=35.36 E-value=13 Score=35.48 Aligned_cols=22 Identities=32% Similarity=0.601 Sum_probs=17.0
Q ss_pred hcccCCCCCCcccCCccccccc
Q 027149 68 IDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 68 ~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
|..+.-.+++.-|||||...||
T Consensus 27 ~~~~fg~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 27 CKVEFGAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp CBCCTTCCTTCSCCTTTTTCTT
T ss_pred CCcccCCCCccccCccccCCCC
Confidence 3334455788899999999988
No 321
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.16 E-value=19 Score=21.84 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=16.6
Q ss_pred eeeCCC--CCC-CccHHHhhhhhc
Q 027149 49 EYPCPF--CSE-DFDLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPf--C~e-~~d~~~L~~H~~ 69 (227)
-|.|++ |+. =.....|..|+.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 499987 999 456777888875
No 322
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.07 E-value=6.8 Score=26.96 Aligned_cols=41 Identities=27% Similarity=0.563 Sum_probs=23.1
Q ss_pred ceeeCCCCCCCc-cHHHh-hhhh-cccCCCCCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDF-DLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~-d~~~L-~~H~-~~eH~~e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.+ +...| |-|. -=..+. .+...||+|...+.
T Consensus 24 ~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~ 67 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVIT 67 (75)
T ss_dssp HHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCC
T ss_pred CCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceec
Confidence 678999998844 33321 3333 111111 13368999987664
No 323
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.05 E-value=6 Score=26.38 Aligned_cols=42 Identities=21% Similarity=0.427 Sum_probs=23.5
Q ss_pred ceeeCCCCCCCccHH-HhhhhhcccCCC---CCCcccCCccccccc
Q 027149 48 YEYPCPFCSEDFDLV-GLCCHIDEEHPV---EAKSGVCPVCVTRVT 89 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~-~L~~H~~~eH~~---e~~~vvCPVC~~~~~ 89 (227)
..+.||.|.+.+... --|.|.-=..+. -.+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSCCSEEETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCccCcccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 568999999854432 224443111111 124678999976553
No 324
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=35.00 E-value=13 Score=29.40 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=13.1
Q ss_pred ceeeCCCCCCCccHHH
Q 027149 48 YEYPCPFCSEDFDLVG 63 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~ 63 (227)
..+.|+-||..+....
T Consensus 69 ~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 69 AVFKCRNCNYEWKLKE 84 (139)
T ss_dssp CEEEETTTCCEEEGGG
T ss_pred CcEECCCCCCEEeccc
Confidence 5799999999777655
No 325
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=34.82 E-value=14 Score=29.90 Aligned_cols=26 Identities=31% Similarity=0.832 Sum_probs=17.6
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
.=+||.|+.++.- .+....|||-|+.
T Consensus 27 lP~CP~C~seytY------------eDg~l~vCPeC~h 52 (138)
T 2akl_A 27 LPPCPQCNSEYTY------------EDGALLVCPECAH 52 (138)
T ss_dssp SCCCTTTCCCCCE------------ECSSSEEETTTTE
T ss_pred CCCCCCCCCcceE------------ecCCeEECCcccc
Confidence 4589999775532 1345689999965
No 326
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=34.69 E-value=14 Score=35.38 Aligned_cols=17 Identities=24% Similarity=0.755 Sum_probs=14.4
Q ss_pred CCCCCcccCCccccccc
Q 027149 73 PVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 73 ~~e~~~vvCPVC~~~~~ 89 (227)
-.+++.-|||||...||
T Consensus 31 g~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 31 ELPPNTAICPVCTGQPG 47 (482)
T ss_dssp TCCTTSSCCTTTTTCTT
T ss_pred cCCCcCccCceecCCCC
Confidence 44688899999999987
No 327
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=34.65 E-value=14 Score=28.93 Aligned_cols=31 Identities=13% Similarity=0.159 Sum_probs=24.8
Q ss_pred CCCCcccCCcccccc--chhhHhhhhccccccc
Q 027149 74 VEAKSGVCPVCVTRV--TMDMVDHITTQHGNIS 104 (227)
Q Consensus 74 ~e~~~vvCPVC~~~~--~~d~i~Hl~~qH~~~~ 104 (227)
-+...++|-.|...- ...++.|+..+|++=|
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~ 43 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNI 43 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCH
Confidence 345679999998753 3799999999999844
No 328
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=34.47 E-value=4.4 Score=25.60 Aligned_cols=41 Identities=27% Similarity=0.495 Sum_probs=21.7
Q ss_pred ceeeCCCCCCCccH-----HH-hhhhhcccCCCC---CCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDL-----VG-LCCHIDEEHPVE---AKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~-----~~-L~~H~~~eH~~e---~~~vvCPVC~~~~ 88 (227)
..+.||.|.+.+.. .. -|.|.-=.++.. .....||+|...+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPS 53 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSS
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcC
Confidence 35789999887632 11 244432111111 1126799997654
No 329
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=34.12 E-value=5.1 Score=28.33 Aligned_cols=42 Identities=29% Similarity=0.501 Sum_probs=25.0
Q ss_pred ceeeCCCCCC-CccHHHh-hhhh-cccCCCCCCcccCCccccccch
Q 027149 48 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVTM 90 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L-~~H~-~~eH~~e~~~vvCPVC~~~~~~ 90 (227)
....||.|.+ ..+..-| |-|. -=..+.. +...||+|...+..
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAA-QLQSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHT-TCSBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHH-hcCcCCCCCchhhC
Confidence 5678999988 5555444 5554 1111221 12389999887653
No 330
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=33.80 E-value=17 Score=18.52 Aligned_cols=21 Identities=33% Similarity=0.556 Sum_probs=15.0
Q ss_pred eeeCC--CCCCCc-cHHHhhhhhc
Q 027149 49 EYPCP--FCSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CP--fC~e~~-d~~~L~~H~~ 69 (227)
.|.|+ .|+..| ....|..|..
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHH
Confidence 37888 898854 5567777765
No 331
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=33.56 E-value=22 Score=19.96 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=16.4
Q ss_pred ceeeCCC--CCCCc-cHHHhhhhhc
Q 027149 48 YEYPCPF--CSEDF-DLVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPf--C~e~~-d~~~L~~H~~ 69 (227)
-.|.|++ |+..| ....|..|..
T Consensus 7 k~~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 7 KQHICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHH
Confidence 3599996 99955 5567888865
No 332
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=33.54 E-value=14 Score=35.21 Aligned_cols=22 Identities=9% Similarity=-0.034 Sum_probs=16.9
Q ss_pred hcccCCCCCCcccCCccccccc
Q 027149 68 IDEEHPVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 68 ~~~eH~~e~~~vvCPVC~~~~~ 89 (227)
|..+.-.+++.-|||||...||
T Consensus 25 ~~~~fg~~PNt~v~pv~lg~PG 46 (483)
T 3ip4_B 25 SPAHFGAEPNSNTNVIDLAYPG 46 (483)
T ss_dssp SBSSCCSSTTCSCCTTTTTCTT
T ss_pred CCCcCCCCCccCcCchhccCCC
Confidence 3334456788899999999988
No 333
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=31.50 E-value=14 Score=24.33 Aligned_cols=26 Identities=19% Similarity=0.439 Sum_probs=22.1
Q ss_pred eeeCCCCCCCccHHHhhhhhcccCCCC
Q 027149 49 EYPCPFCSEDFDLVGLCCHIDEEHPVE 75 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L~~H~~~eH~~e 75 (227)
.=.|--||..+-+..++.|++ +|+..
T Consensus 17 YRvC~~CgkPi~lsAIvdHLe-nhC~~ 42 (44)
T 2lo3_A 17 YRVCEKCGKPLALTAIVDHLE-NHCAG 42 (44)
T ss_dssp EEECTTTCCEEETTTHHHHHH-HCCTT
T ss_pred chhhcccCCcchHHHHHHHHH-HHhcc
Confidence 457999999999999999998 67653
No 334
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=31.40 E-value=11 Score=25.53 Aligned_cols=36 Identities=25% Similarity=0.435 Sum_probs=23.6
Q ss_pred ceeeCCCCCC-CccHHHhhhhhcccCCCCCCcccCCccccccchhhHh
Q 027149 48 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVD 94 (227)
Q Consensus 48 ~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~~d~i~ 94 (227)
....||.|+. .+ ..+ .+...+||..|-.-+..+.|.
T Consensus 10 ~~~~Cp~C~~~~l---------v~D--~~~ge~vC~~CGlVl~e~~iD 46 (58)
T 1dl6_A 10 PRVTCPNHPDAIL---------VED--YRAGDMICPECGLVVGDRVID 46 (58)
T ss_dssp SCCSBTTBSSSCC---------EEC--SSSCCEECTTTCCEECCSCCC
T ss_pred ccccCcCCCCCce---------eEe--CCCCeEEeCCCCCEEeccccc
Confidence 3457999986 42 112 245669999997777665554
No 335
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.20 E-value=14 Score=26.74 Aligned_cols=16 Identities=13% Similarity=0.235 Sum_probs=12.1
Q ss_pred hhhHhhhhcccccccc
Q 027149 90 MDMVDHITTQHGNISN 105 (227)
Q Consensus 90 ~d~i~Hl~~qH~~~~K 105 (227)
.+|.+||..-|..-++
T Consensus 49 S~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 49 TALWKHLKSMHREELE 64 (76)
T ss_dssp CHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCHHHHH
Confidence 5788888888877665
No 336
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=30.92 E-value=10 Score=29.24 Aligned_cols=38 Identities=24% Similarity=0.495 Sum_probs=0.0
Q ss_pred eeCCCCCCCccHH--------------------HhhhhhcccCCCCC---CcccCCccccc
Q 027149 50 YPCPFCSEDFDLV--------------------GLCCHIDEEHPVEA---KSGVCPVCVTR 87 (227)
Q Consensus 50 F~CPfC~e~~d~~--------------------~L~~H~~~eH~~e~---~~vvCPVC~~~ 87 (227)
=.|+.|-+.|+.. .-|.|.--.|+... .+..||+|...
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp -------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 3688888877642 13777766666643 35689999664
No 337
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=30.23 E-value=5.2 Score=30.16 Aligned_cols=37 Identities=24% Similarity=0.534 Sum_probs=21.2
Q ss_pred eCCCCCCCccHH--------------------HhhhhhcccCCCCC---CcccCCccccc
Q 027149 51 PCPFCSEDFDLV--------------------GLCCHIDEEHPVEA---KSGVCPVCVTR 87 (227)
Q Consensus 51 ~CPfC~e~~d~~--------------------~L~~H~~~eH~~e~---~~vvCPVC~~~ 87 (227)
.|+.|.+.|+.. .-|.|.--.|+... .+..||+|...
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 588887766643 22455443333321 35679999764
No 338
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.49 E-value=4.4 Score=28.52 Aligned_cols=10 Identities=30% Similarity=0.880 Sum_probs=7.5
Q ss_pred ccCCcccccc
Q 027149 79 GVCPVCVTRV 88 (227)
Q Consensus 79 vvCPVC~~~~ 88 (227)
..||+|...+
T Consensus 65 ~~CP~CR~~~ 74 (81)
T 2ecl_A 65 NRCPLCQQDW 74 (81)
T ss_dssp CBCTTTCCBC
T ss_pred CCCCCcCCCc
Confidence 4899997654
No 339
>3kfu_F Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=29.35 E-value=18 Score=34.41 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=15.0
Q ss_pred CCCCCcccCCccccccc
Q 027149 73 PVEAKSGVCPVCVTRVT 89 (227)
Q Consensus 73 ~~e~~~vvCPVC~~~~~ 89 (227)
-.+++.-|||||...||
T Consensus 30 g~~PNt~vcpvclglPG 46 (466)
T 3kfu_F 30 GAEPNTHTCPVCLGLPG 46 (466)
T ss_dssp SCCTTSSCCTTTTTCTT
T ss_pred CCCCCCccCccccCCCC
Confidence 56788899999999988
No 340
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.16 E-value=29 Score=19.22 Aligned_cols=21 Identities=24% Similarity=0.569 Sum_probs=15.6
Q ss_pred eeeCCC--CCCCc-cHHHhhhhhc
Q 027149 49 EYPCPF--CSEDF-DLVGLCCHID 69 (227)
Q Consensus 49 ~F~CPf--C~e~~-d~~~L~~H~~ 69 (227)
.|.|++ |+..| ....|..|+.
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHH
Confidence 599995 99954 4566888875
No 341
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=29.07 E-value=16 Score=25.81 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=19.3
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 7 EILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp EECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999987554321 235678999854
No 342
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=28.89 E-value=29 Score=25.14 Aligned_cols=28 Identities=25% Similarity=0.481 Sum_probs=20.5
Q ss_pred eeeCCC--CCCCcc-HHHhhhhhcccCCCCC
Q 027149 49 EYPCPF--CSEDFD-LVGLCCHIDEEHPVEA 76 (227)
Q Consensus 49 ~F~CPf--C~e~~d-~~~L~~H~~~eH~~e~ 76 (227)
-|.|++ |+.-|. ...|..|+...|..+.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgEK 57 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDL 57 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCCC
Confidence 399976 999554 5678889866677543
No 343
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=28.46 E-value=19 Score=37.18 Aligned_cols=34 Identities=21% Similarity=0.515 Sum_probs=22.5
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.||.|+..|...+ - ..-.|.+-.+.||.|.-
T Consensus 266 ~~~~cp~~g~~~~~~~--p---~~FSfN~p~GaCp~C~G 299 (972)
T 2r6f_A 266 EKHACPYCGFSIGELE--P---RLFSFNSPFGACPDCDG 299 (972)
T ss_dssp SSEECTTTCCEEECCC--G---GGGCSSSTTTBCTTTTS
T ss_pred ccccCCCCCCcCCCCC--h---hhcCcCCCCCCCCCCcC
Confidence 5699999997554321 1 12245566699999975
No 344
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=28.25 E-value=6.3 Score=30.87 Aligned_cols=40 Identities=20% Similarity=0.417 Sum_probs=23.4
Q ss_pred ceeeCCCCCCCccHH--Hhhhhh-----cccCCCCCCcccCCcccccc
Q 027149 48 YEYPCPFCSEDFDLV--GLCCHI-----DEEHPVEAKSGVCPVCVTRV 88 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~--~L~~H~-----~~eH~~e~~~vvCPVC~~~~ 88 (227)
..|.||.|.+-|... .-|.|. .... .......||+|...+
T Consensus 30 ~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~-~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQAQCGHRYCSFCLASI-LSSGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHH-GGGSCEECHHHHHTT
T ss_pred cCcCCCCCChhhcCcEECCCCCccCHHHHHHH-HhcCCCCCCCCCCcc
Confidence 679999998854422 234442 2221 123446899997743
No 345
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=28.24 E-value=21 Score=23.93 Aligned_cols=10 Identities=30% Similarity=1.172 Sum_probs=8.9
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..+.||.|+.
T Consensus 34 ~dw~CP~Cg~ 43 (52)
T 1yk4_A 34 DDWVCPLCGA 43 (52)
T ss_dssp TTCBCTTTCC
T ss_pred CCCcCCCCCC
Confidence 6789999997
No 346
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=28.16 E-value=17 Score=25.69 Aligned_cols=28 Identities=7% Similarity=0.054 Sum_probs=19.1
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp CCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999987554322 235678998854
No 347
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=27.52 E-value=17 Score=27.16 Aligned_cols=15 Identities=33% Similarity=0.733 Sum_probs=10.6
Q ss_pred eeeCCCCCCCccHHH
Q 027149 49 EYPCPFCSEDFDLVG 63 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~ 63 (227)
.-.||||+.-|-...
T Consensus 48 ~~~CpYCg~~y~~~~ 62 (87)
T 2jz8_A 48 EKICPYCSTLYRYDP 62 (87)
T ss_dssp EECCTTTCCEEECCT
T ss_pred eEECCCCCCEeEcCC
Confidence 478999998654433
No 348
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=27.32 E-value=19 Score=25.49 Aligned_cols=28 Identities=14% Similarity=0.292 Sum_probs=19.3
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
....||.|.-.+.... +....+||-|..
T Consensus 7 eiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (69)
T 2pk7_A 7 DILACPICKGPLKLSA-----------DKTELISKGAGL 34 (69)
T ss_dssp GTCCCTTTCCCCEECT-----------TSSEEEETTTTE
T ss_pred hheeCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999987554321 235678999954
No 349
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=27.01 E-value=35 Score=26.25 Aligned_cols=27 Identities=22% Similarity=0.442 Sum_probs=19.8
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.|--||..|. .--.+++.||.|..
T Consensus 66 ~p~~C~~CG~~F~------------~~~~kPsrCP~CkS 92 (105)
T 2gmg_A 66 KPAQCRKCGFVFK------------AEINIPSRCPKCKS 92 (105)
T ss_dssp CCCBBTTTCCBCC------------CCSSCCSSCSSSCC
T ss_pred ECcChhhCcCeec------------ccCCCCCCCcCCCC
Confidence 3589999999881 12245689999965
No 350
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=26.51 E-value=9.6 Score=25.11 Aligned_cols=41 Identities=27% Similarity=0.468 Sum_probs=23.3
Q ss_pred eeeCCCCCCCccH---HHhhhhhcccCCCC---CCcccCCccccccc
Q 027149 49 EYPCPFCSEDFDL---VGLCCHIDEEHPVE---AKSGVCPVCVTRVT 89 (227)
Q Consensus 49 ~F~CPfC~e~~d~---~~L~~H~~~eH~~e---~~~vvCPVC~~~~~ 89 (227)
...||.|.+.+.. ..-|.|.-=..+.. .+...||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 4689999886643 22355542111211 12357999987664
No 351
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=25.97 E-value=19 Score=26.58 Aligned_cols=14 Identities=14% Similarity=0.456 Sum_probs=10.4
Q ss_pred eeeCCCCCCCccHH
Q 027149 49 EYPCPFCSEDFDLV 62 (227)
Q Consensus 49 ~F~CPfC~e~~d~~ 62 (227)
...||||+.-|-..
T Consensus 53 ~~~CpYCg~~f~l~ 66 (80)
T 2jvm_A 53 FVECGYCDRRYIHE 66 (80)
T ss_dssp EEECSSSSCEEEEH
T ss_pred eEECCCCCCEEEec
Confidence 57899999955444
No 352
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=25.80 E-value=18 Score=25.62 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=19.1
Q ss_pred ceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 7 DILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 6789999988554321 235678999854
No 353
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=25.00 E-value=29 Score=24.47 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=20.0
Q ss_pred ccCcceeeCCCCCCCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 44 VKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 44 ~r~~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
+. ....||.|.-.+.... +....+||-|..
T Consensus 7 LL--eiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 7 LL--EVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp GT--CCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HH--HHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 55 6889999987544321 235678998854
No 354
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=24.95 E-value=55 Score=22.82 Aligned_cols=21 Identities=19% Similarity=0.569 Sum_probs=15.4
Q ss_pred CCCCHHHHHHHHh-HhhHHHHH
Q 027149 197 SSLSNEDHLEKAN-RSNFAQGL 217 (227)
Q Consensus 197 ~~ls~ed~eEk~~-R~eFVQgL 217 (227)
..|+++|++|+.+ |-++++.+
T Consensus 20 ~gLT~eEk~EQ~~LR~eYl~~f 41 (60)
T 3bhp_A 20 GVITEEEKAEQQKLRQEYLKGF 41 (60)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 5699999999855 66666543
No 355
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=24.43 E-value=8.9 Score=23.60 Aligned_cols=9 Identities=33% Similarity=0.874 Sum_probs=7.5
Q ss_pred ccCCccccc
Q 027149 79 GVCPVCVTR 87 (227)
Q Consensus 79 vvCPVC~~~ 87 (227)
-+||+|.+.
T Consensus 17 ~~CP~CtA~ 25 (32)
T 2bai_A 17 EECPKCSAL 25 (32)
T ss_dssp GGHHHHHCS
T ss_pred cccccccee
Confidence 789999774
No 356
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=24.41 E-value=11 Score=28.88 Aligned_cols=54 Identities=22% Similarity=0.312 Sum_probs=29.7
Q ss_pred eeCCCCCCCccHHHhhhhhcccCCCCCCcccCCccccccc-------hhhHhhhhcccccccccc
Q 027149 50 YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-------MDMVDHITTQHGNISNSW 107 (227)
Q Consensus 50 F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~-------~d~i~Hl~~qH~~~~K~~ 107 (227)
-.||-|..+++..+=.-||..=+..=.+.+.||-|...+- .|+.- +|++-+|++
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC----~~chgLiSK 93 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFC----QHGHGLISK 93 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEE----TTTTEEECT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhh----ccCCceeec
Confidence 5677777666544322233322222344578999988653 34432 566777653
No 357
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=24.18 E-value=32 Score=35.62 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=22.2
Q ss_pred ceeeCCCCC-CCccHHHhhhhhcccCCCCCCcccCCcccc
Q 027149 48 YEYPCPFCS-EDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 86 (227)
Q Consensus 48 ~~F~CPfC~-e~~d~~~L~~H~~~eH~~e~~~vvCPVC~~ 86 (227)
..|.||.|+ ..|...+= ..-.|.+-.+.||.|.-
T Consensus 274 ~~~~c~~~g~~~~~~~~p-----~~FSfN~p~GaCp~C~G 308 (993)
T 2ygr_A 274 EKLACPNGHALAVDDLEP-----RSFSFNSPYGACPDCSG 308 (993)
T ss_dssp SSCBCTTCCCCSCSCCCG-----GGGCTTSTTTBCTTTTT
T ss_pred ccccCCCCCCcccCCCCh-----hhcCcCCCCCCCCCCcC
Confidence 469999999 55543211 12245566699999975
No 358
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=22.91 E-value=8.5 Score=29.37 Aligned_cols=10 Identities=30% Similarity=1.284 Sum_probs=8.4
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 4699999976
No 359
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=22.61 E-value=24 Score=25.06 Aligned_cols=11 Identities=27% Similarity=0.996 Sum_probs=8.7
Q ss_pred eeeCCCCCCCc
Q 027149 49 EYPCPFCSEDF 59 (227)
Q Consensus 49 ~F~CPfC~e~~ 59 (227)
...||||+.-|
T Consensus 40 ~~~CpYCg~~f 50 (67)
T 2jrr_A 40 WVECPYCDCKY 50 (67)
T ss_dssp EEEETTTTEEE
T ss_pred eEECCCCCCEE
Confidence 57899999744
No 360
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=21.92 E-value=17 Score=32.53 Aligned_cols=10 Identities=30% Similarity=0.773 Sum_probs=7.7
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..=.||.||-
T Consensus 181 ~~~~CPvCGs 190 (309)
T 2fiy_A 181 SRTLCPACGS 190 (309)
T ss_dssp TCSSCTTTCC
T ss_pred cCCCCCCCCC
Confidence 4568999987
No 361
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.64 E-value=40 Score=23.81 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=29.5
Q ss_pred eeeCCCCCCCc-cHHHhhhhhcccCCCCCCcccCCccccccchhhHhhhhccccc
Q 027149 49 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGN 102 (227)
Q Consensus 49 ~F~CPfC~e~~-d~~~L~~H~~~eH~~e~~~vvCPVC~~~~~~d~i~Hl~~qH~~ 102 (227)
.|.|++|+..| ....|..|... |..+ +.-.|.-|..+ ..++.|....-+.
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~~-Ht~e-kp~~C~~~~~~--~~~~~~~~~~~~~ 75 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLNI-HNEE-FQKRAKRQERR--KQLLSKQKYADGA 75 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHHH-HHHHCCCCSCC--CCCCCCCCCCCCS
T ss_pred CCcCCCCCCEeCCHHHHHHHHHH-hCCC-CCcccchhhhH--HHHHhhhcccccc
Confidence 59999999955 45678888763 4332 34457666432 2444444443333
No 362
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=21.32 E-value=20 Score=27.36 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=9.6
Q ss_pred eeeCCCCCCCccHHHh
Q 027149 49 EYPCPFCSEDFDLVGL 64 (227)
Q Consensus 49 ~F~CPfC~e~~d~~~L 64 (227)
..+||+||. =|..++
T Consensus 3 ~I~CP~CG~-R~e~EF 17 (99)
T 2gag_D 3 LIDCPNCGP-RNENEF 17 (99)
T ss_dssp EEEETTTEE-EEGGGS
T ss_pred EecCCCCCC-cchhhE
Confidence 368999985 444443
No 363
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=21.21 E-value=32 Score=26.48 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=27.1
Q ss_pred ceeeCCCCCC--CccHH---HhhhhhcccCCCCCC------cccCCccccc
Q 027149 48 YEYPCPFCSE--DFDLV---GLCCHIDEEHPVEAK------SGVCPVCVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e--~~d~~---~L~~H~~~eH~~e~~------~vvCPVC~~~ 87 (227)
.-|-|--||. +++.. .+...+...+-|... .++||-|..+
T Consensus 86 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 136 (139)
T 3mwm_A 86 HHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGA 136 (139)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC
T ss_pred cEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCc
Confidence 5689999998 66533 445566666666443 2789999764
No 364
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.83 E-value=55 Score=23.34 Aligned_cols=39 Identities=21% Similarity=0.564 Sum_probs=21.2
Q ss_pred ceeeCCCCCC-------------CccHHHhhhhhcccCCCCCCcccCCc--cccc
Q 027149 48 YEYPCPFCSE-------------DFDLVGLCCHIDEEHPVEAKSGVCPV--CVTR 87 (227)
Q Consensus 48 ~~F~CPfC~e-------------~~d~~~L~~H~~~eH~~e~~~vvCPV--C~~~ 87 (227)
..|.||.|.+ .|+...+..++...+. ......||+ |...
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 3577776655 3444444444443221 123568999 9754
No 365
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=20.48 E-value=34 Score=26.13 Aligned_cols=22 Identities=23% Similarity=0.449 Sum_probs=18.8
Q ss_pred ceeeCCCCCCCccHHHhhhhhc
Q 027149 48 YEYPCPFCSEDFDLVGLCCHID 69 (227)
Q Consensus 48 ~~F~CPfC~e~~d~~~L~~H~~ 69 (227)
..|.||-|+..+-..-..-|++
T Consensus 69 ~~~~C~nC~R~vaa~RFApHLe 90 (99)
T 3mhs_C 69 QYIHCENCGRDVSANRLAAHLQ 90 (99)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CeEECCCCCCCchhhhhHHHHH
Confidence 6899999999888888888875
No 366
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=20.37 E-value=63 Score=21.42 Aligned_cols=14 Identities=14% Similarity=0.415 Sum_probs=9.7
Q ss_pred ceeeCCCCCCCccH
Q 027149 48 YEYPCPFCSEDFDL 61 (227)
Q Consensus 48 ~~F~CPfC~e~~d~ 61 (227)
..-.|++||+.+-.
T Consensus 17 ~~~~C~~CG~~i~~ 30 (49)
T 2l8e_A 17 NLLKCEYCGKYAPA 30 (49)
T ss_dssp SEEECTTTCCEEEG
T ss_pred CCCcChhccCcccc
Confidence 34579999985543
No 367
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=20.31 E-value=24 Score=27.36 Aligned_cols=41 Identities=20% Similarity=0.511 Sum_probs=23.2
Q ss_pred cceeeCCCCCC--CccHH---HhhhhhcccCCCCCC------cccCCccccc
Q 027149 47 EYEYPCPFCSE--DFDLV---GLCCHIDEEHPVEAK------SGVCPVCVTR 87 (227)
Q Consensus 47 ~~~F~CPfC~e--~~d~~---~L~~H~~~eH~~e~~------~vvCPVC~~~ 87 (227)
+.-|-|--||. +++.. .+...+...+-|... .++||-|..+
T Consensus 88 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 139 (145)
T 3eyy_A 88 HIHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCESCSLK 139 (145)
T ss_dssp SEEEEESSSSCEEEECGGGGHHHHHHHHHHTCEEECSCSSCEEEEECC----
T ss_pred ceEEEECCCCCEEEecCccHHHHHHHHHHhCCCEEEeEEEEEEEECHHHhCc
Confidence 35799999998 77643 345555444444221 3889999764
No 368
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=20.10 E-value=31 Score=20.61 Aligned_cols=21 Identities=24% Similarity=0.618 Sum_probs=14.9
Q ss_pred eeeCC--CCCCCccH-HHhhhhhc
Q 027149 49 EYPCP--FCSEDFDL-VGLCCHID 69 (227)
Q Consensus 49 ~F~CP--fC~e~~d~-~~L~~H~~ 69 (227)
.|.|+ .|+..|.. ..|..|..
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~ 41 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQ 41 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHH
Confidence 59996 59995544 55777765
No 369
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=20.06 E-value=33 Score=25.47 Aligned_cols=10 Identities=30% Similarity=0.912 Sum_probs=8.5
Q ss_pred ceeeCCCCCC
Q 027149 48 YEYPCPFCSE 57 (227)
Q Consensus 48 ~~F~CPfC~e 57 (227)
..|.||.|+.
T Consensus 67 ddW~CPvCga 76 (87)
T 1s24_A 67 DDWCCPDCGA 76 (87)
T ss_dssp TTCCCSSSCC
T ss_pred CCCCCCCCCC
Confidence 5789999987
Done!