BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027151
(227 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423547|ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266199 [Vitis vinifera]
gi|297738051|emb|CBI27252.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/229 (69%), Positives = 183/229 (79%), Gaps = 2/229 (0%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGLHLRVTF 58
MVQ +S+STLTTSGNGG YGS ALW RHF+L+ K++I G +R H Q L
Sbjct: 1 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQL 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
+ RQRNLR AGWLFKGG D+GLDASSE SESANEDIL FFFQLDLATRVQ ALN E+Y
Sbjct: 61 VMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQY 120
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQQLR+KLTEVE E+ +Q EAKRG +SKSEAQDKALS+IRLRADLQKAI++ENYALAA
Sbjct: 121 EIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAA 180
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGNNMPFIG 227
+LRD+I KLEAESLAASA AL +EN +AFRLGQKV HK+FG + G
Sbjct: 181 ELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICG 229
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/229 (69%), Positives = 183/229 (79%), Gaps = 2/229 (0%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGLHLRVTF 58
MVQ +S+STLTTSGNGG YGS ALW RHF+L+ K++I G +R H Q L
Sbjct: 1 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQL 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
+ RQRNLR AGWLFKGG D+GLDASSE SESANEDIL FFFQLDLATRVQ ALN E+Y
Sbjct: 61 VMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQY 120
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQQLR+KLTEVE E+ +Q EAKRG +SKSEAQDKALS+IRLRADLQKAI++ENYALAA
Sbjct: 121 EIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAA 180
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGNNMPFIG 227
+LRD+I KLEAESLAASA AL +EN +AFRLGQKV HK+FG + G
Sbjct: 181 ELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICG 229
>gi|255542114|ref|XP_002512121.1| DNA binding protein, putative [Ricinus communis]
gi|223549301|gb|EEF50790.1| DNA binding protein, putative [Ricinus communis]
Length = 336
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/223 (69%), Positives = 171/223 (76%), Gaps = 7/223 (3%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWR-RHFKLLEKSR--IGIDRPCFCHQFVQGLHLRVT 57
MVQ LSL+ LT S N G S WR RHFKL+ ++ GIDR HQ VQ L+
Sbjct: 1 MVQNLSLNALTVSRNCGICVSLPSWRGRHFKLVRRTHNAFGIDR----HQLVQSLYFMGN 56
Query: 58 FNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEE 117
NL R RNLR AGWLF G ++ +AS ERSESANEDIL FFFQLDLATRVQ ALN E+
Sbjct: 57 PNLSRHRNLRVEAGWLFNRGGNQESEASCERSESANEDILIFFFQLDLATRVQYALNTEQ 116
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALA 177
YDIAQQLRNKLTEVE E+ RQ EAKRG SSKSEAQDKALSIIRLRADLQ AI++ENYA+A
Sbjct: 117 YDIAQQLRNKLTEVEAEVIRQQEAKRGSSSKSEAQDKALSIIRLRADLQNAIENENYAMA 176
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
A LRDQI KLEAESLAAS ALA+ENA++AFRLGQKV HK FG
Sbjct: 177 AQLRDQISKLEAESLAASVNALAYENAQYAFRLGQKVTHKTFG 219
>gi|356499859|ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794023 [Glycine max]
Length = 327
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/222 (65%), Positives = 171/222 (77%), Gaps = 9/222 (4%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGID--RPCFCHQFVQGLHLRVTF 58
MVQV+SLSTL T GN GS W F+ ++S+I R + VQ L L
Sbjct: 1 MVQVVSLSTLATCGNSRLCGSSPSWMAPFEPYKRSQITSSNGRHLVWNNSVQSLFL---- 56
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
R + RA A W+F+GG ++GLDASSE SESANEDIL FFFQLDLATRVQ ALNME+Y
Sbjct: 57 --TRHSDFRAEAAWMFRGG-EQGLDASSEHSESANEDILMFFFQLDLATRVQYALNMEQY 113
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIA+QLRNKL EVEEE+ +Q ++KRGLSSK EAQDKA+SIIRLR+DLQKAI++E+YALAA
Sbjct: 114 DIAKQLRNKLAEVEEEVIKQQQSKRGLSSKGEAQDKAISIIRLRSDLQKAIENEDYALAA 173
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
+LRD+I KLEAESLAASATALA ENA++AFRLGQKV HK FG
Sbjct: 174 ELRDEISKLEAESLAASATALAHENAQYAFRLGQKVRHKKFG 215
>gi|42568906|ref|NP_178438.2| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
gi|51971212|dbj|BAD44298.1| unknown protein [Arabidopsis thaliana]
gi|51971335|dbj|BAD44332.1| unknown protein [Arabidopsis thaliana]
gi|330250601|gb|AEC05695.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
Length = 330
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/221 (62%), Positives = 158/221 (71%), Gaps = 4/221 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R ++ S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSVKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYD 119
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+YD
Sbjct: 58 LKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQYD 117
Query: 120 IAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAAD 179
IAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 118 IAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAAK 177
Query: 180 LRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
LRD+I KLEAESLA SA ALAFE A +AFRLGQK+ HK FG
Sbjct: 178 LRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFG 218
>gi|449452875|ref|XP_004144184.1| PREDICTED: uncharacterized protein LOC101203572 [Cucumis sativus]
Length = 336
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 161/222 (72%), Gaps = 3/222 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIG--IDRPCFCHQFVQGLHLRVTF 58
MVQ LS+ +T G+ YGS WRR+FK +++ + R CF HQ ++ L
Sbjct: 1 MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++ + + AGWLFKGG ERSE+AN DIL FFFQLDLATRVQ ALN+E+Y
Sbjct: 61 RRSKRGSFKIRAGWLFKGGGQES-GGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 119
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQ+LR KLTEVE E+ +Q E+K+GL+SKSE QDK L+IIRLRADLQKA++SENYALAA
Sbjct: 120 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAA 179
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
LRD+I KLE +SLAASA LA+E+A ++FRLGQKV HKIFG
Sbjct: 180 QLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRHKIFG 221
>gi|297817996|ref|XP_002876881.1| hypothetical protein ARALYDRAFT_904615 [Arabidopsis lyrata subsp.
lyrata]
gi|297322719|gb|EFH53140.1| hypothetical protein ARALYDRAFT_904615 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 138/222 (62%), Positives = 158/222 (71%), Gaps = 5/222 (2%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R + S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSSKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGS-DRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+Y
Sbjct: 58 IKQRNLLRVEARWPFQGGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 117
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 118 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 177
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
LRD+I KLEAESLA SA ALAFENA +AFRLGQK+ HK FG
Sbjct: 178 KLRDEISKLEAESLAVSAKALAFENAEYAFRLGQKLRHKTFG 219
>gi|357487407|ref|XP_003613991.1| F-box only protein [Medicago truncatula]
gi|355515326|gb|AES96949.1| F-box only protein [Medicago truncatula]
Length = 300
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 172/230 (74%), Gaps = 10/230 (4%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGL-HLRVT 57
MVQ +SLSTL T G YGSP F+ ++S I + ++ V+ L +
Sbjct: 1 MVQGVSLSTLATCGKSRIYGSP------FEPFKQSHITSSTGKHLVWNKCVKSLVFIGYP 54
Query: 58 FNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEE 117
F ++ + AGW+F+GG ++ LDAS E+SESANEDIL FFFQLDLATRVQCALNMEE
Sbjct: 55 FASRQRSGFKVEAGWMFRGG-EQELDASVEQSESANEDILMFFFQLDLATRVQCALNMEE 113
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALA 177
YDIA+QLRNKLTEVEEE+ +Q ++KRG+SSKSEAQDKALS+IRLR+DLQ AI++E+YALA
Sbjct: 114 YDIAKQLRNKLTEVEEEVIKQKQSKRGMSSKSEAQDKALSVIRLRSDLQSAIENEDYALA 173
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGNNMPFIG 227
A LRD+I KLEAESLAASA ALA ENA++ FRLGQKV HK+FG +G
Sbjct: 174 AKLRDEISKLEAESLAASAKALAHENAQYVFRLGQKVKHKMFGYRAIIVG 223
>gi|356494893|ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783767 [Glycine max]
Length = 303
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/162 (74%), Positives = 140/162 (86%), Gaps = 2/162 (1%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDIL-FFFFQLDLATRVQCALNMEEY 118
L R RA A W+F+GG ++GLD SSE SESANEDIL FFFFQLDLATRVQ ALNME+Y
Sbjct: 31 LTRHSGFRAEAAWMFRGG-EQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQY 89
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIA+QLRNKL EVEEE+ +Q ++KRGLSSKSEAQDKA+SIIRL +DLQ AI++E+YALAA
Sbjct: 90 DIAKQLRNKLAEVEEEVIKQQQSKRGLSSKSEAQDKAISIIRLHSDLQNAIENEHYALAA 149
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
+LRD+I KLEAESLAASA ALA ENA++AFRLGQKV HK FG
Sbjct: 150 ELRDEISKLEAESLAASAKALAHENAQYAFRLGQKVRHKKFG 191
>gi|413952331|gb|AFW84980.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
gi|413952332|gb|AFW84981.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
gi|413952333|gb|AFW84982.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 334
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 139/189 (73%), Gaps = 12/189 (6%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEA 151
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG S K+EA
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG-SPKTEA 148
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLG 211
QDKAL++IR+RADLQKAIDSENYALAA LRD I KLE ESLA SA ALA++N ++AFRLG
Sbjct: 149 QDKALNLIRVRADLQKAIDSENYALAAGLRDDIAKLEVESLAVSAKALAYQNVKYAFRLG 208
Query: 212 QKVNHKIFG 220
QKV H I G
Sbjct: 209 QKVRHNIHG 217
>gi|125527819|gb|EAY75933.1| hypothetical protein OsI_03852 [Oryza sativa Indica Group]
gi|125572130|gb|EAZ13645.1| hypothetical protein OsJ_03562 [Oryza sativa Japonica Group]
Length = 275
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/157 (68%), Positives = 130/157 (82%), Gaps = 3/157 (1%)
Query: 65 NLRANAGWLFKGGSDRGL-DASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQ 123
+R NA WLF GG DR +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+Q
Sbjct: 4 TVRTNAKWLF-GGDDRSSSNARLERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQ 62
Query: 124 LRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQ 183
LR KLTE+E EI RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+
Sbjct: 63 LREKLTEIETEIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDE 121
Query: 184 ICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
I KLE ESLA SA ALA++N +AFRLGQKV HK+ G
Sbjct: 122 IAKLETESLAVSAKALAYQNVEYAFRLGQKVRHKVHG 158
>gi|115475007|ref|NP_001061100.1| Os08g0172200 [Oryza sativa Japonica Group]
gi|40253874|dbj|BAD05809.1| unknown protein [Oryza sativa Japonica Group]
gi|113623069|dbj|BAF23014.1| Os08g0172200 [Oryza sativa Japonica Group]
Length = 334
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 49 VQGLHLRVTFNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATR 108
V+ LH+R + +R NA WLF G +A ERSESANEDIL F+FQLDL TR
Sbjct: 48 VKKLHMRTNRRQM-GTTVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTR 106
Query: 109 VQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKA 168
+Q ALN+E++D+A+QLR KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA
Sbjct: 107 IQYALNIEQFDVAKQLREKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKA 165
Query: 169 IDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGNNMPFIG 227
+DSENYALAA LRD+I KLE ESLA SA ALA++N ++AFRLGQKV HK+ G G
Sbjct: 166 VDSENYALAAALRDEIAKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICG 224
>gi|413952334|gb|AFW84983.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 218
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 138/187 (73%), Gaps = 12/187 (6%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEA 151
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG S K+EA
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG-SPKTEA 148
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLG 211
QDKAL++IR+RADLQKAIDSENYALAA LRD I KLE ESLA SA ALA++N ++AFRLG
Sbjct: 149 QDKALNLIRVRADLQKAIDSENYALAAGLRDDIAKLEVESLAVSAKALAYQNVKYAFRLG 208
Query: 212 QKVNHKI 218
QKV H I
Sbjct: 209 QKVRHNI 215
>gi|222639995|gb|EEE68127.1| hypothetical protein OsJ_26212 [Oryza sativa Japonica Group]
Length = 275
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 127/156 (81%), Gaps = 1/156 (0%)
Query: 65 NLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQL 124
+R NA WLF G +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QL
Sbjct: 4 TVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQL 63
Query: 125 RNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
R KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 64 REKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEI 122
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
KLE ESLA SA ALA++N ++AFRLGQKV HK+ G
Sbjct: 123 AKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHG 158
>gi|218200550|gb|EEC82977.1| hypothetical protein OsI_27993 [Oryza sativa Indica Group]
Length = 275
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
Query: 65 NLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQL 124
+R NA WLF G +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QL
Sbjct: 4 TVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQL 63
Query: 125 RNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
R KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 64 REKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEI 122
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGNNMPFIG 227
KLE ESLA SA ALA++N ++AFRLGQKV HK+ G G
Sbjct: 123 AKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICG 165
>gi|226528204|ref|NP_001146614.1| uncharacterized protein LOC100280211 [Zea mays]
gi|219888031|gb|ACL54390.1| unknown [Zea mays]
Length = 218
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 137/187 (73%), Gaps = 12/187 (6%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEA 151
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG S K+EA
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG-SPKTEA 148
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLG 211
QDKAL++IR+RADLQKAIDSENYA AA LRD I KLE ESLA SA ALA++N ++AFRLG
Sbjct: 149 QDKALNLIRVRADLQKAIDSENYASAAGLRDDIAKLEVESLAVSAKALAYQNVKYAFRLG 208
Query: 212 QKVNHKI 218
QKV H I
Sbjct: 209 QKVRHNI 215
>gi|357136589|ref|XP_003569886.1| PREDICTED: uncharacterized protein LOC100832648 [Brachypodium
distachyon]
Length = 337
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 129/158 (81%), Gaps = 4/158 (2%)
Query: 66 LRANAGWLFKG---GSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQ 122
+R NA WLF G S+ +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D A+
Sbjct: 64 VRTNARWLFGGDGRNSNSNANARLERSESANEDILIFYFQLDLQTRIQYALNIEQFDAAK 123
Query: 123 QLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRD 182
QLR KLTE+E EI+RQ EAKRG SSK+EAQDK+++++R+RADLQKAI+SENYALAA+LRD
Sbjct: 124 QLREKLTEIETEITRQREAKRG-SSKNEAQDKSINLLRVRADLQKAIESENYALAAELRD 182
Query: 183 QICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
I KLE ESLA SA ALA++N ++ FRLGQKV HK+ G
Sbjct: 183 AIAKLEGESLALSAKALAYQNVKYEFRLGQKVRHKVHG 220
>gi|326495156|dbj|BAJ85674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 339
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 145/231 (62%), Gaps = 7/231 (3%)
Query: 2 VQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNLL 61
+Q +S+ S +G S + R + K C + LH+R +
Sbjct: 1 MQGISVCDSVVSPHGTSCRSACVARNDLRFCYKINPVSHGACAWRWCAEKLHVRTDRRKM 60
Query: 62 RQRNLRANAGWLFKG-----GSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNME 116
+R NA W F G SD A ERSESANEDIL F+FQLD+ TR+Q ALN+E
Sbjct: 61 NT-TVRTNARWFFGGDARNSNSDGNAKARLERSESANEDILIFYFQLDVQTRIQYALNIE 119
Query: 117 EYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYAL 176
++D A+QLR KL E+E EI+RQ EAKRG SSK+EAQDK+L+++R ADLQKAI+SENYAL
Sbjct: 120 QFDAAKQLREKLAEMETEINRQREAKRG-SSKNEAQDKSLNLLRACADLQKAIESENYAL 178
Query: 177 AADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGNNMPFIG 227
AA+LRD I KLE +SLA SA ALA+++ ++ FRLGQKV HK+ G G
Sbjct: 179 AAELRDTIAKLEGDSLALSAKALAYQSVKYEFRLGQKVRHKVHGYRAVICG 229
>gi|148906096|gb|ABR16207.1| unknown [Picea sitchensis]
Length = 340
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 137/177 (77%), Gaps = 3/177 (1%)
Query: 46 HQFVQGLHLRVTFNLLRQR-NLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLD 104
H+ LH + ++ QR LR A + KG +D + A SE SESANEDIL FFFQLD
Sbjct: 45 HELSHALHFSLMSSVDSQRRGLRVIAAGMSKG-NDPTVTAISECSESANEDILLFFFQLD 103
Query: 105 LATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG-LSSKSEAQDKALSIIRLRA 163
L TR+QCALN ++Y+IAQQLR+KL EVE+E++RQ E+K G SSK EAQDKA++I+RLR
Sbjct: 104 LTTRIQCALNSDQYEIAQQLRSKLAEVEQEVARQRESKMGSTSSKDEAQDKAIAILRLRT 163
Query: 164 DLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
DLQKAI+ E+YA AA+LR++I KLEA+SLAA+A ALA++NA +AFRLGQKV H IFG
Sbjct: 164 DLQKAIEDEDYAYAAELRNKISKLEADSLAAAAKALAYQNAEYAFRLGQKVRHAIFG 220
>gi|297818002|ref|XP_002876884.1| hypothetical protein ARALYDRAFT_322643 [Arabidopsis lyrata subsp.
lyrata]
gi|297322722|gb|EFH53143.1| hypothetical protein ARALYDRAFT_322643 [Arabidopsis lyrata subsp.
lyrata]
Length = 220
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 91/108 (84%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSE 172
+N+E+YDIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE
Sbjct: 1 MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60
Query: 173 NYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
+Y LAA LRD+I KLEAESLA SA ALAFENA +AFRLGQK+ HK FG
Sbjct: 61 DYGLAAKLRDEISKLEAESLAVSAKALAFENAEYAFRLGQKLRHKTFG 108
>gi|449534064|ref|XP_004173989.1| PREDICTED: uncharacterized protein LOC101228319, partial [Cucumis
sativus]
Length = 163
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 3/164 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIG--IDRPCFCHQFVQGLHLRVTF 58
MVQ LS+ +T G+ YGS WRR+FK +++ + R CF HQ ++ L
Sbjct: 1 MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++ + + AGWLFKGG ERSE+AN DIL FFFQLDLATRVQ ALN+E+Y
Sbjct: 61 RRSKRGSFKIRAGWLFKGGGQES-GGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 119
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLR 162
+IAQ+LR KLTEVE E+ +Q E+K+GL+SKSE QDK L+IIRLR
Sbjct: 120 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLR 163
>gi|334184123|ref|NP_001189504.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
gi|4335771|gb|AAD17448.1| unknown protein [Arabidopsis thaliana]
gi|330250602|gb|AEC05696.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/108 (75%), Positives = 90/108 (83%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSE 172
+N+E+YDIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE
Sbjct: 1 MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60
Query: 173 NYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
+Y LAA LRD+I KLEAESLA SA ALAFE A +AFRLGQK+ HK FG
Sbjct: 61 DYGLAAKLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFG 108
>gi|302793464|ref|XP_002978497.1| hypothetical protein SELMODRAFT_56554 [Selaginella moellendorffii]
gi|300153846|gb|EFJ20483.1| hypothetical protein SELMODRAFT_56554 [Selaginella moellendorffii]
Length = 241
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Query: 82 LDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEA 141
L E SES NE++L+F FQLDLATR+Q ALN + YD AQ +R K+++VE+E+S+ E
Sbjct: 1 LSPKDEYSESVNEELLYFLFQLDLATRLQRALNQDHYDAAQAIREKISQVEKEVSKLREK 60
Query: 142 KRG-LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALA 200
K G +S+K+EAQDK ++++R R++L +I+ E+Y A L+D+I KLE+ESLAAS ALA
Sbjct: 61 KAGAVSAKNEAQDKEIALLRFRSELSASIEREDYEGARQLKDKISKLESESLAASVRALA 120
Query: 201 FENARFAFRLGQKVNHKIFG 220
++N ++AFRLGQKV HK+FG
Sbjct: 121 YQNVKYAFRLGQKVRHKLFG 140
>gi|224108918|ref|XP_002315015.1| predicted protein [Populus trichocarpa]
gi|222864055|gb|EEF01186.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 80/90 (88%)
Query: 131 VEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
VE E+ RQ EAKRG SSKSEAQDKA+SIIRLRADLQ AI++ENYA+AA+LRDQI +LEAE
Sbjct: 2 VEGEVIRQQEAKRGSSSKSEAQDKAISIIRLRADLQNAIENENYAVAAELRDQISELEAE 61
Query: 191 SLAASATALAFENARFAFRLGQKVNHKIFG 220
SLAASA AL +ENA++AFRLGQKV HK FG
Sbjct: 62 SLAASAKALVYENAQYAFRLGQKVKHKTFG 91
>gi|302773998|ref|XP_002970416.1| hypothetical protein SELMODRAFT_93877 [Selaginella moellendorffii]
gi|300161932|gb|EFJ28546.1| hypothetical protein SELMODRAFT_93877 [Selaginella moellendorffii]
Length = 215
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG-LSSKSEAQDKALSIIRLRADLQKAIDS 171
LN + YD AQ +R K+++VE+E+S+ E K G +S+K+EAQDK ++++R R++L +I+
Sbjct: 1 LNQDHYDAAQAIREKISQVEKEVSKLREKKAGAVSAKNEAQDKEIALLRFRSELAASIER 60
Query: 172 ENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
E+Y A L+D+I KLE+ESLAAS ALA++N ++AFRLGQKV HK+FG
Sbjct: 61 EDYEGARQLKDKISKLESESLAASVRALAYQNVKYAFRLGQKVRHKLFG 109
>gi|255638073|gb|ACU19351.1| unknown [Glycine max]
Length = 103
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDIL-FFFFQLDLATRVQCALNMEEY 118
L R RA A W+F+GG ++GLD SSE SESANEDIL FFFFQLDLATRVQ ALNME+Y
Sbjct: 31 LTRHSGFRAEAAWMFRGG-EQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQY 89
Query: 119 DIAQQLRNKLTEV 131
DIA+QLRNKL EV
Sbjct: 90 DIAKQLRNKLAEV 102
>gi|168037572|ref|XP_001771277.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677366|gb|EDQ63837.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 217
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGL-SSKSEAQDKALSIIRLRADLQKAIDSENYAL 176
Y+ AQ LR K+ EVE+E++RQ +AK G SSK+E QD ++I++L+A+LQ+ I E+YA
Sbjct: 2 YEAAQGLREKIAEVEQEMARQRKAKTGSDSSKNEVQDTGIAILQLKAELQRLIAEEDYAA 61
Query: 177 AADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFG 220
A +R+++ LEAESLAA AL+++ F FRLGQKV H++ G
Sbjct: 62 AGAIRNKLTALEAESLAAQVQALSYQQRSFQFRLGQKVRHRVIG 105
>gi|449531615|ref|XP_004172781.1| PREDICTED: F-box only protein 21-like, partial [Cucumis sativus]
Length = 179
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 57/64 (89%)
Query: 157 SIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNH 216
+IIRLRADLQKA++SENYALAA LRD+I KLE +SLAASA LA+E+A ++FRLGQKV H
Sbjct: 1 NIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRH 60
Query: 217 KIFG 220
KIFG
Sbjct: 61 KIFG 64
>gi|223974865|gb|ACN31620.1| unknown [Zea mays]
Length = 152
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEI 135
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E+++
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIEQKL 133
>gi|4335759|gb|AAD17436.1| unknown protein [Arabidopsis thaliana]
gi|45773924|gb|AAS76766.1| At2g03400 [Arabidopsis thaliana]
Length = 131
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R ++ S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSVKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQ 110
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ
Sbjct: 58 LKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQ 108
>gi|195613214|gb|ACG28437.1| hypothetical protein [Zea mays]
Length = 148
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 10/98 (10%)
Query: 42 PCFCHQFVQGLH-LRVTFNLLRQRN--------LRANAGWLFKGGSDRGLDASSERSESA 92
PC + QGLH L + + +N ++ NA WLF GG R DA ERSESA
Sbjct: 31 PCEVNAVSQGLHSLHWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSESA 89
Query: 93 NEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE 130
NEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE
Sbjct: 90 NEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTE 127
>gi|413952335|gb|AFW84984.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 149
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 11/99 (11%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE 130
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTE 128
>gi|159483241|ref|XP_001699669.1| hypothetical protein CHLREDRAFT_141656 [Chlamydomonas reinhardtii]
gi|158281611|gb|EDP07365.1| predicted protein [Chlamydomonas reinhardtii]
Length = 293
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Query: 75 KGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLT-EVEE 133
+GG+ ERS+ NE++++F FQLDL T++Q LN E Y+ AQ++R K ++E
Sbjct: 9 EGGATVRPVGERERSQLVNEEVVYFIFQLDLDTQLQRCLNYEAYEAAQEVRKKRQRSMKE 68
Query: 134 EISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLA 193
+R A + + A D A ++RLR ++Q+A+++E+Y AA RD + +LE E+
Sbjct: 69 RKARNTGAPVAVQRLAGA-DYAAELLRLRTEMQRAVEAEDYGSAAKYRDLLKELETEAKK 127
Query: 194 ASATALAFENAR---FAFRLGQKVNHKIFGNNMPFIG 227
A+A A ++ RLGQ+V HK G +G
Sbjct: 128 AAALAAEWDTTSPNGPVLRLGQRVLHKQLGYRGVVVG 164
>gi|302843425|ref|XP_002953254.1| hypothetical protein VOLCADRAFT_94016 [Volvox carteri f.
nagariensis]
gi|300261351|gb|EFJ45564.1| hypothetical protein VOLCADRAFT_94016 [Volvox carteri f.
nagariensis]
Length = 381
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 102 QLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAK------RGLSSKSEAQDKA 155
QLDL T++Q LN E Y+ AQ++R K V+E + + E K S+K A D A
Sbjct: 15 QLDLDTQLQRCLNYEAYEAAQEVRKKRQRVDEAVQQMRERKARNTGMPAASTKLGAADFA 74
Query: 156 LSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFA-----FRL 210
+RLR+++Q+A+++ENYA AA RD + +LE + A+A A ++ + RL
Sbjct: 75 TEGLRLRSEMQRAVEAENYADAAKYRDLLRELETQVKKAAALAAEWDTTTSSSGGPKLRL 134
Query: 211 GQKVNHKIFGNNMPFIG 227
GQ+V H+ G +G
Sbjct: 135 GQRVLHRQLGYRGVVVG 151
>gi|384245506|gb|EIE19000.1| hypothetical protein COCSUDRAFT_54839 [Coccomyxa subellipsoidea
C-169]
Length = 253
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 94 EDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQD 153
++++ F FQ + T++Q ALN E+YD A +R + V+E I E + S+
Sbjct: 14 QELVLFIFQQEFDTQLQRALNYEDYDQANDIRQRRQTVDEAI----EKLQVFPSQD---- 65
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAAS---ATALAFENARFAFRL 210
++LR LQ+AI+ + Y AA LRD I L+ + A+ + ++ + R +L
Sbjct: 66 -----VQLRVQLQRAIEEQRYDDAAALRDTIGALQQKMRDAALQRSNSMQAQQPR-RLKL 119
Query: 211 GQKVNHKIFG 220
GQ+V H G
Sbjct: 120 GQRVEHATSG 129
>gi|297720435|ref|NP_001172579.1| Os01g0764500 [Oryza sativa Japonica Group]
gi|255673711|dbj|BAH91309.1| Os01g0764500, partial [Oryza sativa Japonica Group]
Length = 73
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFG 220
ESLA SA ALA++N +AFRLGQKV HK+ G
Sbjct: 2 ESLAVSAKALAYQNVEYAFRLGQKVRHKVHG 32
>gi|307103624|gb|EFN51882.1| hypothetical protein CHLNCDRAFT_59044 [Chlorella variabilis]
Length = 285
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
++ERS N++++ F FQL++ +++Q AL E +D+AQ++R + +V+ + R+L+ +G
Sbjct: 70 TAERSMLINKEVVLFLFQLEMDSQLQRALTYERFDMAQEVRGRREQVDAAL-RELQQLKG 128
>gi|283781590|ref|YP_003372345.1| UvrB/UvrC protein [Pirellula staleyi DSM 6068]
gi|283440043|gb|ADB18485.1| UvrB/UvrC protein [Pirellula staleyi DSM 6068]
Length = 171
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 141 AKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
KR + S SE D +IRLR ++++A+D E+Y A+ LRD+I ++E E
Sbjct: 119 GKRPVGS-SEGTDAQTDLIRLRREMKEAVDREDYEQASKLRDEIRRVETE 167
>gi|297819718|ref|XP_002877742.1| hypothetical protein ARALYDRAFT_485388 [Arabidopsis lyrata subsp.
lyrata]
gi|297323580|gb|EFH54001.1| hypothetical protein ARALYDRAFT_485388 [Arabidopsis lyrata subsp.
lyrata]
Length = 2182
Score = 40.4 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR-------- 162
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ +
Sbjct: 552 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKESADVVDW 611
Query: 163 ADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
D ++ +D + DL I S +SAT+ + F F QK
Sbjct: 612 EDSERMVDRITTSSTLDLSVPI-----RSFESSATSQFSRDGSFGFPDRQK 657
>gi|47497763|dbj|BAD19863.1| unknown protein [Oryza sativa Japonica Group]
Length = 231
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 146 SSKSEAQDKALSIIR----LRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAF 201
S ++E SI R L+ DLQ AI ENYA AA LRD++ L+ +S +A A
Sbjct: 57 SGEAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAA--- 113
Query: 202 ENARF--AFRLGQKV 214
NARF AF+ G V
Sbjct: 114 -NARFYNAFKNGDLV 127
>gi|115449137|ref|NP_001048348.1| Os02g0788500 [Oryza sativa Japonica Group]
gi|113537879|dbj|BAF10262.1| Os02g0788500 [Oryza sativa Japonica Group]
gi|215692516|dbj|BAG87936.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737625|dbj|BAG96755.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191718|gb|EEC74145.1| hypothetical protein OsI_09224 [Oryza sativa Indica Group]
gi|222623813|gb|EEE57945.1| hypothetical protein OsJ_08664 [Oryza sativa Japonica Group]
Length = 240
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 146 SSKSEAQDKALSIIR----LRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAF 201
S ++E SI R L+ DLQ AI ENYA AA LRD++ L+ +S +A A
Sbjct: 66 SGEAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAA--- 122
Query: 202 ENARF--AFRLGQKV 214
NARF AF+ G V
Sbjct: 123 -NARFYNAFKNGDLV 136
>gi|6523048|emb|CAB62316.1| putative protein [Arabidopsis thaliana]
Length = 2152
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR--ADLQKA 168
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ + AD+
Sbjct: 555 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDW 614
Query: 169 IDSE 172
DSE
Sbjct: 615 EDSE 618
>gi|240255576|ref|NP_190606.6| uncharacterized protein [Arabidopsis thaliana]
gi|332645138|gb|AEE78659.1| uncharacterized protein [Arabidopsis thaliana]
Length = 2156
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR--ADLQKA 168
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ + AD+
Sbjct: 528 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDW 587
Query: 169 IDSE 172
DSE
Sbjct: 588 EDSE 591
>gi|296121028|ref|YP_003628806.1| UvrB/UvrC protein [Planctomyces limnophilus DSM 3776]
gi|296013368|gb|ADG66607.1| UvrB/UvrC protein [Planctomyces limnophilus DSM 3776]
Length = 173
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 123 QLRNKLTEVEEEISRQLEAKRGLSSK-SEAQDKALSIIRLRADLQKAIDSENYALAADLR 181
R +LT + E I +++ + + +A + +IRL+ L++AID ENY AA LR
Sbjct: 97 HFREELTRLIENIHSEVQHVGKVPKRQPDASRQQFDLIRLKLQLKEAIDEENYEKAAGLR 156
Query: 182 DQICKLEAESLAASATA 198
DQI ++E E L +S+ A
Sbjct: 157 DQIRQVELE-LRSSSPA 172
>gi|159483425|ref|XP_001699761.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281703|gb|EDP07457.1| predicted protein [Chlamydomonas reinhardtii]
Length = 951
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 14/104 (13%)
Query: 94 EDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQD 153
+D LF FQ A + N+++ AQQ R E+E + LE G S+ EA+
Sbjct: 550 QDCLFIVFQEAKARLAELGTNLQD---AQQGRQ-----EKEAA--LEVLSGRVSQLEARA 599
Query: 154 KALSIIRLR-ADLQK---AIDSENYALAADLRDQICKLEAESLA 193
L +RLR A+L+ ++D+ YA+ A+LRD++ +LEAE+ A
Sbjct: 600 AELEAMRLRVAELEAQGASLDASRYAVTAELRDRVGELEAETEA 643
>gi|363581114|ref|ZP_09313924.1| two component regulator three Y domain-containing protein
[Flavobacteriaceae bacterium HQM9]
Length = 202
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 112 ALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDS 171
L E+ D+ QL +K E++IS L + LS + ++ K S I++ DLQK I +
Sbjct: 39 TLETEKLDLVTQLISK----EKDIS--LRTREILSLQMQSVKKLQSKIKIAEDLQKVIKN 92
Query: 172 ----ENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
+ Y++ AD+R KLE E + +A NA F F+L K
Sbjct: 93 KTKVDTYSILADIRS--SKLEDEKVLVIKQQIAEHNASFIFQLTGK 136
>gi|308163407|gb|EFO65747.1| Hypothetical protein GLP15_5013 [Giardia lamblia P15]
Length = 367
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 150 EAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKL 187
EA + A +I L+ +Q+A+D+++Y LAA LRDQI +L
Sbjct: 7 EASNIASTIATLKQRMQEAVDAQDYVLAAKLRDQIGEL 44
>gi|32475126|ref|NP_868120.1| hypothetical protein RB7962 [Rhodopirellula baltica SH 1]
gi|421613772|ref|ZP_16054843.1| UvrB/UvrC protein [Rhodopirellula baltica SH28]
gi|440716892|ref|ZP_20897395.1| UvrB/UvrC protein [Rhodopirellula baltica SWK14]
gi|449138300|ref|ZP_21773570.1| UvrB/UvrC protein [Rhodopirellula europaea 6C]
gi|32445666|emb|CAD75672.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
gi|408495358|gb|EKJ99945.1| UvrB/UvrC protein [Rhodopirellula baltica SH28]
gi|436438085|gb|ELP31661.1| UvrB/UvrC protein [Rhodopirellula baltica SWK14]
gi|448883073|gb|EMB13617.1| UvrB/UvrC protein [Rhodopirellula europaea 6C]
Length = 173
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 100 FFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSII 159
FF+ + R+ C L+ + ++ L+ L + + + KR + + A +A +I
Sbjct: 80 FFEFRNSGRLGCPLDYDHFEA--DLKPLLINIHDSLEHT--GKRPTRAAATADSQA-DLI 134
Query: 160 RLRADLQKAIDSENYALAADLRDQICKLEAES 191
RLR +++ A++ E Y A++LRDQI ++ E
Sbjct: 135 RLRKEMEAAVEREEYERASELRDQINAIQGEP 166
>gi|373454703|ref|ZP_09546567.1| hypothetical protein HMPREF9453_00736 [Dialister succinatiphilus
YIT 11850]
gi|371935566|gb|EHO63311.1| hypothetical protein HMPREF9453_00736 [Dialister succinatiphilus
YIT 11850]
Length = 180
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 146 SSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATA 198
K+E ++++ + LR L K + ENY AA +RD+I KLE E T+
Sbjct: 127 PKKAEVKEESPELTGLRNKLSKLVADENYEEAAKVRDEIHKLEEEGKGKGGTS 179
>gi|334139319|ref|ZP_08512711.1| excinuclease ABC, B subunit [Paenibacillus sp. HGF7]
gi|333602132|gb|EGL13563.1| excinuclease ABC, B subunit [Paenibacillus sp. HGF7]
Length = 665
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 109 VQCALNMEE----YDIAQQLRNKL--TEVEEEISRQL-EAKRGLSSKSEAQDKALSIIRL 161
+Q A N+E IA+++R+ + T+V EE + L E K G SK +D+A I RL
Sbjct: 579 IQEAYNIEHGITPQTIAKKIRDVIEATKVAEEKTEYLAEVKTGKMSK---KDRAAVIERL 635
Query: 162 RADLQKAIDSENYALAADLRDQICKLEAE 190
A+++ A S + AA+LRD + +L+AE
Sbjct: 636 EAEMKDAAKSLQFERAAELRDALLELKAE 664
>gi|302844992|ref|XP_002954035.1| hypothetical protein VOLCADRAFT_106212 [Volvox carteri f.
nagariensis]
gi|300260534|gb|EFJ44752.1| hypothetical protein VOLCADRAFT_106212 [Volvox carteri f.
nagariensis]
Length = 1401
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 47 QFVQGLHLRVTFNLLRQRNLRANAGWLFKGGSD-------RGLDASSERSESANEDILFF 99
+F + H R +L +R R NAG L + S + D E +E A
Sbjct: 277 EFRESSHARAAPSLKGERE-RVNAGDLLQTSSRSSWDEWLKHFDTMDELAEDAAH----- 330
Query: 100 FFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSII 159
+Q++L T A+ E+Y A + + KL E++ + D S+
Sbjct: 331 -YQIELNT----AVRQEQYGDAARFKRKLQEIQ------------------SSDTVASVQ 367
Query: 160 RLRADLQKAIDSENYALAADLRDQ 183
R LQ+A+ +E Y AADLRD+
Sbjct: 368 R---QLQEALATEQYGAAADLRDR 388
>gi|402306007|ref|ZP_10825060.1| UvrB/UvrC domain protein [Prevotella sp. MSX73]
gi|400380096|gb|EJP32923.1| UvrB/UvrC domain protein [Prevotella sp. MSX73]
Length = 166
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 134 EISRQLEAKRGLSSK-SEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
E+ R L+ +++K + Q++ L + RL +DL +AI +EN+ L A +R+QI
Sbjct: 108 ELKRTLKQFSAIATKLQKRQNRVLLVARLESDLNEAIQAENFELCASIREQI 159
>gi|357137361|ref|XP_003570269.1| PREDICTED: uncharacterized protein LOC100845596 [Brachypodium
distachyon]
Length = 249
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 146 SSKSEAQDKALSII---RLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFE 202
SS +E A+ ++ LR DL+ AI+ E+Y AA LRD++ L + +A A
Sbjct: 73 SSDTENATTAIPVVDEETLRRDLEAAIEDEDYVSAARLRDELRHLREDGRSAVLAA---- 128
Query: 203 NARF--AFRLG 211
NARF AFR G
Sbjct: 129 NARFYDAFREG 139
>gi|357129692|ref|XP_003566495.1| PREDICTED: uncharacterized protein LOC100832438 [Brachypodium
distachyon]
Length = 297
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 77 GSDRGLDASSERSESANEDILFFFFQLD----LATRVQCALNMEEYDIAQQLRNKLTEVE 132
G D + ++ R E ++ F + L ++ A +E+Y A +LR+ L E
Sbjct: 62 GKDEETEEAAARREEGDKAAAAFLLRSQKYAMLKQQLAVAAQLEDYKEAARLRDSLRSFE 121
Query: 133 EEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESL 192
EE ++RLR L+KA++ E +A AA RD++ L SL
Sbjct: 122 EE---------------------EPVLRLRRSLKKAVEEERFADAAKYRDELMILAPHSL 160
>gi|217073514|gb|ACJ85117.1| unknown [Medicago truncatula]
Length = 185
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 137 RQLEAKRGLSSKS-----EAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAES 191
R+ ++G+ S+ ++D AL L +LQ AI ENYA AA++RD + L+ +
Sbjct: 2 RRFRTRQGVKSEDAESMLSSEDIALDENTLEEELQNAIAEENYAKAAEIRDTLKNLQKD- 60
Query: 192 LAASATALAFENARF--AFRLG 211
S TA+ N++F +FR G
Sbjct: 61 ---SNTAVFGANSKFYDSFRNG 79
>gi|283768498|ref|ZP_06341410.1| excinuclease ABC, B subunit [Bulleidia extructa W1219]
gi|283104890|gb|EFC06262.1| excinuclease ABC, B subunit [Bulleidia extructa W1219]
Length = 660
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 109 VQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSE--AQDKALSIIRLRADLQ 166
+Q N E + + + ++ + +V Q A R + K++ QD A I L A+++
Sbjct: 575 IQETYNKEHHIVPKTVQKSIGDVIRGKETQEMASRYIRKKAKMSKQDTATLITHLEAEMK 634
Query: 167 KAIDSENYALAADLRDQICKLEAES 191
+A + N+ AA+LRD + +L+AES
Sbjct: 635 EAAANLNFERAAELRDMVLELKAES 659
>gi|325109941|ref|YP_004271009.1| UvrB/UvrC protein [Planctomyces brasiliensis DSM 5305]
gi|324970209|gb|ADY60987.1| UvrB/UvrC protein [Planctomyces brasiliensis DSM 5305]
Length = 183
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 153 DKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
++ +I+LR DL +A+++E+Y AA LRD+I LE E
Sbjct: 141 EQQFRLIQLRKDLSEAVEAEDYEQAAQLRDEIQSLEEE 178
>gi|257457777|ref|ZP_05622938.1| UVR domain protein [Treponema vincentii ATCC 35580]
gi|257444827|gb|EEV19909.1| UVR domain protein [Treponema vincentii ATCC 35580]
Length = 176
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 153 DKALSIIRLRADLQKAIDSENYALAADLRDQI 184
+ A S+ RL +LQKA+++E Y LAA LRD+I
Sbjct: 138 ETAFSLHRLEEELQKAVENEEYELAAYLRDKI 169
>gi|301096229|ref|XP_002897212.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107297|gb|EEY65349.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1262
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 43 CFCHQFVQGLHLRVTFNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQ 102
F H +GL + F + +A+ G D SE S ++ ++ F
Sbjct: 854 VFYHSLNEGLPVTRRFQWGQPEEWKASEG---------NEDEESESSVTSRSELSAGSFT 904
Query: 103 LDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLR 162
+ T Q +N E Q+L L E +E+ +QL+AK GL+S+S +A + R
Sbjct: 905 VSTITSKQ-QVNSE---AQQELMRSLLE-DEQFLQQLKAKLGLTSRSRPASRAAARSGRR 959
Query: 163 ADLQKAIDSENYALAADLRDQICKLEAESLAASATAL-AFENARFAFRLGQKVNHKI 218
+ + + + EN A DL+D++ L E++ S +AL A + A+ +L Q ++
Sbjct: 960 SLVFEDREDENDARQVDLKDEMDALVDEAMDRSKSALVAAKVAKLQLKLPQTTGVRV 1016
>gi|255587201|ref|XP_002534177.1| conserved hypothetical protein [Ricinus communis]
gi|223525737|gb|EEF28201.1| conserved hypothetical protein [Ricinus communis]
Length = 190
Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 143 RGLSSKSEAQDKALS---II----RLRADLQKAIDSENYALAADLRDQICKLEAESLAAS 195
R KSE ++ LS II L DLQ AI+ ENYA AA +RD + L+ +S A+
Sbjct: 12 RACQVKSEDSEEMLSGESIILDEQALTRDLQIAIEEENYAQAAKIRDSLRLLQEDSKASV 71
Query: 196 ATALAFENARF--AFRLG 211
A NARF AFR G
Sbjct: 72 LAA----NARFYNAFRNG 85
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,006,166,255
Number of Sequences: 23463169
Number of extensions: 106956969
Number of successful extensions: 362771
Number of sequences better than 100.0: 221
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 362552
Number of HSP's gapped (non-prelim): 307
length of query: 227
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 90
effective length of database: 9,144,741,214
effective search space: 823026709260
effective search space used: 823026709260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)