Query 027152
Match_columns 227
No_of_seqs 30 out of 32
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 09:02:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027152.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027152hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3d85d1 b.1.1.4 (D:1-87) The p 16.3 31 0.0022 24.5 1.8 21 104-124 1-21 (87)
2 d2pila_ d.24.1.1 (A:) Pilin Gc 11.1 57 0.0042 20.8 1.9 13 133-145 9-21 (158)
3 d1xgsa2 d.127.1.1 (A:1-194,A:2 10.1 48 0.0035 23.6 1.3 13 101-113 180-192 (218)
4 d1z2la1 c.56.5.4 (A:4-212,A:33 9.8 78 0.0057 25.5 2.7 35 94-130 53-93 (293)
5 d2v3za2 d.127.1.1 (A:177-440) 8.4 43 0.0031 24.4 0.4 16 101-116 200-215 (264)
6 d1chma2 d.127.1.1 (A:157-402) 7.5 81 0.0059 22.4 1.6 14 101-114 195-208 (246)
7 d1mqia_ c.94.1.1 (A:) Glutamat 7.2 88 0.0064 21.8 1.7 11 75-85 1-13 (260)
8 d1deca_ g.3.15.2 (A:) Decorsin 7.1 54 0.0039 20.2 0.4 10 52-61 16-25 (39)
9 d2nlva1 d.326.1.1 (A:1-111) Hy 7.0 57 0.0042 23.6 0.5 16 78-93 93-108 (111)
10 d2nwva1 d.326.1.1 (A:2-113) Hy 6.7 60 0.0044 23.5 0.5 16 78-93 94-109 (112)
No 1
>d3d85d1 b.1.1.4 (D:1-87) The p40 domain of interleukin-12 (IL-12 beta chain), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.30 E-value=31 Score=24.51 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=17.2
Q ss_pred eeeecceeeeeccccccCCcC
Q 027152 104 IYAVEPTVYVADSAISSGSAG 124 (227)
Q Consensus 104 IyaVEP~vyvAeSaiSsg~AG 124 (227)
|...+|-|||-|+.-+++++|
T Consensus 1 ~W~L~~nV~VVevdw~~~~~~ 21 (87)
T d3d85d1 1 IWELKKDVYVVELDWYPDAPG 21 (87)
T ss_dssp CEEEETTEEEEEEECCSSCCC
T ss_pred CceecCcEEEEEecCCCCCCc
Confidence 567899999999987777655
No 2
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=11.14 E-value=57 Score=20.79 Aligned_cols=13 Identities=38% Similarity=0.393 Sum_probs=7.8
Q ss_pred hHHHHhhHHHHHH
Q 027152 133 TIAITAGVAFLAI 145 (227)
Q Consensus 133 t~ai~aglaliav 145 (227)
.++|+|.|+.+++
T Consensus 9 ViaIIgILaaia~ 21 (158)
T d2pila_ 9 VIAIVGILAAVAL 21 (158)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3566666666654
No 3
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=10.10 E-value=48 Score=23.57 Aligned_cols=13 Identities=23% Similarity=0.687 Sum_probs=10.7
Q ss_pred Ccceeeecceeee
Q 027152 101 QTNIYAVEPTVYV 113 (227)
Q Consensus 101 QtNIyaVEP~vyv 113 (227)
-+++|+|||-+|+
T Consensus 180 ~GmV~tiEP~i~~ 192 (218)
T d1xgsa2 180 EGDVFAIEPFATI 192 (218)
T ss_dssp TTCEEEECCEEES
T ss_pred CCCEEEECCEEEe
Confidence 4557999999987
No 4
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]}
Probab=9.77 E-value=78 Score=25.49 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=19.3
Q ss_pred eeccCCCCcceeeecc------eeeeeccccccCCcCCCCCCc
Q 027152 94 VEKDTAGQTNIYAVEP------TVYVADSAISSGSAGSSAAGS 130 (227)
Q Consensus 94 VEkDTAGQtNIyaVEP------~vyvAeSaiSsg~AGtss~G~ 130 (227)
|.-|.+| |||..-| ...+..|-+-+-..|+..||.
T Consensus 53 v~~D~~G--Nvig~~~G~~~~~~~v~iGSHlDtV~~gG~~Dg~ 93 (293)
T d1z2la1 53 TRFDEVG--NLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQ 93 (293)
T ss_dssp EEECTTS--CEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTH
T ss_pred EEEecCC--cEEEEEeccCCCCceeEeeeecccCCCCCCCCCc
Confidence 4457777 9997621 123335555555556555543
No 5
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=8.38 E-value=43 Score=24.36 Aligned_cols=16 Identities=25% Similarity=0.522 Sum_probs=12.8
Q ss_pred Ccceeeecceeeeecc
Q 027152 101 QTNIYAVEPTVYVADS 116 (227)
Q Consensus 101 QtNIyaVEP~vyvAeS 116 (227)
-.++|++||.+|..+.
T Consensus 200 ~gMv~~iEP~i~~~~~ 215 (264)
T d2v3za2 200 PGMVLTVAPGLYIAPD 215 (264)
T ss_dssp TTCEEEECCEEEECTT
T ss_pred CCcEEeecCCEEecCC
Confidence 3568999999998654
No 6
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]}
Probab=7.48 E-value=81 Score=22.42 Aligned_cols=14 Identities=14% Similarity=0.401 Sum_probs=11.5
Q ss_pred Ccceeeecceeeee
Q 027152 101 QTNIYAVEPTVYVA 114 (227)
Q Consensus 101 QtNIyaVEP~vyvA 114 (227)
.+++|+|||.+|.-
T Consensus 195 ~GMv~~iEp~i~~~ 208 (246)
T d1chma2 195 PGMVVSMEPMIMLP 208 (246)
T ss_dssp TTCEEEECCEEEEC
T ss_pred CCCEEEEcCeEEcc
Confidence 35689999999974
No 7
>d1mqia_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Rat (Rattus norvegicus), GluR2 [TaxId: 10116]}
Probab=7.18 E-value=88 Score=21.80 Aligned_cols=11 Identities=45% Similarity=0.422 Sum_probs=8.3
Q ss_pred ccceEeee--CCC
Q 027152 75 EKTKVAGT--FPP 85 (227)
Q Consensus 75 erTkVvgt--fpP 85 (227)
.||-+|+| +||
T Consensus 1 ~~t~~v~t~~~pP 13 (260)
T d1mqia_ 1 NKTVVVTTILESP 13 (260)
T ss_dssp CCCEEEEECCBTT
T ss_pred CeEEEEEEcccCC
Confidence 37888887 666
No 8
>d1deca_ g.3.15.2 (A:) Decorsin {North american leech (Macrobdella decora) [TaxId: 6405]}
Probab=7.05 E-value=54 Score=20.15 Aligned_cols=10 Identities=50% Similarity=1.252 Sum_probs=8.0
Q ss_pred CCCCcCccCc
Q 027152 52 DCNDEECAPD 61 (227)
Q Consensus 52 dCN~eeCAP~ 61 (227)
-||..||-|.
T Consensus 16 lcnkdecppg 25 (39)
T d1deca_ 16 LCNKDECPPG 25 (39)
T ss_dssp ESSSSEECTT
T ss_pred cccCCCCCCc
Confidence 3799999885
No 9
>d2nlva1 d.326.1.1 (A:1-111) Hypothetical protein Ava3825 {Anabaena variabilis [TaxId: 1172]}
Probab=6.95 E-value=57 Score=23.63 Aligned_cols=16 Identities=44% Similarity=0.688 Sum_probs=14.5
Q ss_pred eEeeeCCCCcccccce
Q 027152 78 KVAGTFPPRKREWTGY 93 (227)
Q Consensus 78 kVvgtfpP~k~~wTGY 93 (227)
.|+|--||.+|.-|||
T Consensus 93 IVLgFh~P~~R~~T~f 108 (111)
T d2nlva1 93 IVLGLQAPYKRQYTDY 108 (111)
T ss_dssp EEETTSCGGGGGGSSS
T ss_pred EEEeccCcccccCCcc
Confidence 6888889999999998
No 10
>d2nwva1 d.326.1.1 (A:2-113) Hypothetical protein Ava3320 {Anabaena variabilis [TaxId: 1172]}
Probab=6.70 E-value=60 Score=23.51 Aligned_cols=16 Identities=31% Similarity=0.598 Sum_probs=14.4
Q ss_pred eEeeeCCCCcccccce
Q 027152 78 KVAGTFPPRKREWTGY 93 (227)
Q Consensus 78 kVvgtfpP~k~~wTGY 93 (227)
.|+|--||.+|.-|||
T Consensus 94 IVLgFh~P~~R~~T~f 109 (112)
T d2nwva1 94 IVLAFHPPDVRKFTDF 109 (112)
T ss_dssp EEETTSCGGGGGGSSS
T ss_pred EEEeecCcccccCCcc
Confidence 6888888999999998
Done!