BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027158
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6TGY8|EMC2_DANRE ER membrane protein complex subunit 2 OS=Danio rerio GN=emc2 PE=2
SV=1
Length = 297
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 134/213 (62%), Gaps = 1/213 (0%)
Query: 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVL 60
+DC D+A C++ L++QFP+S RV RL G+ LEA + +A K Y S+L+D+P +
Sbjct: 64 LDCSRDDLAWSCLQELKRQFPDSHRVKRLAGMRLEALERYDDANKLYDSILQDDPTNTAA 123
Query: 61 HKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120
KR++ I +AQG AI LN+YLE F+ D +AW EL+E+Y++ Y +AAFC EEL++
Sbjct: 124 RKRKICILRAQGKSSEAIRELNEYLEQFVGDQEAWHELSELYINEHDYAKAAFCLEELMM 183
Query: 121 SQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQL 180
+ P LY YA+V YT GG++N+ LA+KY+A + L +N +ALFG+ + +S IA
Sbjct: 184 TNPHNHLYCEQYAEVKYTQGGLENLELARKYFAQALKLN-NRNMRALFGLYMSASHIAAS 242
Query: 181 TKGRNKEDKESPELQSLAAAALEKDYKQRAPAK 213
K K K++ + + AAA + + Y+ K
Sbjct: 243 PKVSAKVKKDNVKYAAWAAAQISRAYQMAGRGK 275
>sp|Q6INS3|EMC2A_XENLA ER membrane protein complex subunit 2-A OS=Xenopus laevis GN=emc2-a
PE=2 SV=1
Length = 297
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 130/207 (62%), Gaps = 1/207 (0%)
Query: 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVL 60
+DC D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+D+P +
Sbjct: 64 LDCGRDDIAMSCLQELRRQFPGSHRVKRLTGLRFEAMERYDDALQIYDRILQDDPTNTAA 123
Query: 61 HKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120
KR++AI KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EELIL
Sbjct: 124 RKRKIAIRKAQGRNSEAIRELNEYLEQFVGDQEAWHELAELYINELDYAKAAFCLEELIL 183
Query: 121 SQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQL 180
+ P Y+ +A+V YT GG++N+ L++KY++ + L N +ALFG+ + S IA
Sbjct: 184 TNPHNHFYYQQFAEVKYTQGGLENLELSRKYFSQALKL-NNHNMRALFGLYISSVHIASN 242
Query: 181 TKGRNKEDKESPELQSLAAAALEKDYK 207
K K K++ + + AA+ ++K Y+
Sbjct: 243 PKASAKMKKDNVKYATWAASQIKKAYQ 269
>sp|Q5M7J9|EMC2_XENTR ER membrane protein complex subunit 2 OS=Xenopus tropicalis GN=emc2
PE=2 SV=1
Length = 297
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 129/207 (62%), Gaps = 1/207 (0%)
Query: 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVL 60
+DC D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+D+P +
Sbjct: 64 LDCGRDDIAMSCLQELRRQFPGSHRVKRLTGLRFEAMERYDDALQIYDRILQDDPTNTAA 123
Query: 61 HKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120
KR++AI KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EELIL
Sbjct: 124 RKRKIAIRKAQGRNAEAIRELNEYLEQFVGDQEAWHELAELYINELDYAKAAFCLEELIL 183
Query: 121 SQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQL 180
+ P Y+ +A+V YT GG++N+ L++KY++ + L N +ALFG+ + S IA
Sbjct: 184 TNPHNHFYYQQFAEVKYTQGGLENLELSRKYFSQALKL-NNHNMRALFGLYISSVHIASN 242
Query: 181 TKGRNKEDKESPELQSLAAAALEKDYK 207
K K K++ + + A + ++K Y+
Sbjct: 243 PKASAKMKKDNVKYATWATSQIKKAYQ 269
>sp|Q8AVU9|EMC2B_XENLA ER membrane protein complex subunit 2-B OS=Xenopus laevis GN=emc2-b
PE=2 SV=1
Length = 297
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 129/207 (62%), Gaps = 1/207 (0%)
Query: 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVL 60
+DC D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+D+P +
Sbjct: 64 LDCGRDDIAMSCLQELRRQFPGSHRVKRLTGLRFEAMERYDDALQIYDRILQDDPTNTAT 123
Query: 61 HKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120
KR++AI KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EELIL
Sbjct: 124 RKRKIAIRKAQGRNAEAIRELNEYLEQFVGDQEAWHELAELYINELDYAKAAFCLEELIL 183
Query: 121 SQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQL 180
+ P Y+ +A+V YT GG++N+ L++KY++ + L + +ALFG+ + S IA
Sbjct: 184 TNPHNHFYYQQFAEVKYTQGGLENLELSRKYFSQALKL-NNHSMRALFGLYMSSVHIASN 242
Query: 181 TKGRNKEDKESPELQSLAAAALEKDYK 207
K K K++ + + A + ++K Y+
Sbjct: 243 PKASAKMKKDNVKYATWATSQIKKAYQ 269
>sp|Q5E993|EMC2_BOVIN ER membrane protein complex subunit 2 OS=Bos taurus GN=EMC2 PE=2
SV=1
Length = 297
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Query: 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVA 66
D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+++P + KR++A
Sbjct: 70 DLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIA 129
Query: 67 IAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP 126
I KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EEL+++ P
Sbjct: 130 IRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPYNH 189
Query: 127 LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNK 186
LY YA+V YT GG++N+ L++KY+A + L +N +ALFG+ + +S IA K K
Sbjct: 190 LYCQQYAEVKYTQGGLENLELSRKYFAQALKLN-NRNMRALFGLYMSASHIASNPKASAK 248
Query: 187 EDKESPELQSLAAAALEKDYK 207
K++ + S AA+ + K Y+
Sbjct: 249 TKKDNMKYASWAASQINKAYQ 269
>sp|Q15006|EMC2_HUMAN ER membrane protein complex subunit 2 OS=Homo sapiens GN=EMC2 PE=1
SV=1
Length = 297
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Query: 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVA 66
D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+++P + KR++A
Sbjct: 70 DLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIA 129
Query: 67 IAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP 126
I KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EEL+++ P
Sbjct: 130 IRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNH 189
Query: 127 LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNK 186
LY YA+V YT GG++N+ L++KY+A + L +N +ALFG+ + +S IA K K
Sbjct: 190 LYCQQYAEVKYTQGGLENLELSRKYFAQALKLN-NRNMRALFGLYMSASHIASNPKASAK 248
Query: 187 EDKESPELQSLAAAALEKDYK 207
K++ + S AA+ + + Y+
Sbjct: 249 TKKDNMKYASWAASQINRAYQ 269
>sp|Q5R882|EMC2_PONAB ER membrane protein complex subunit 2 OS=Pongo abelii GN=EMC2 PE=2
SV=1
Length = 297
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Query: 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVA 66
D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+++P + KR++A
Sbjct: 70 DLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIA 129
Query: 67 IAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP 126
I KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EEL+++ P
Sbjct: 130 IRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNH 189
Query: 127 LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNK 186
LY YA+V YT GG++N+ L++KY+A + L +N +ALFG+ + +S IA K K
Sbjct: 190 LYCQQYAEVKYTQGGLENLELSRKYFAQALKLN-NRNMRALFGLYMSASHIASNPKASAK 248
Query: 187 EDKESPELQSLAAAALEKDYK 207
K++ + S AA+ + + Y+
Sbjct: 249 TKKDNMKYASWAASQINRAYQ 269
>sp|Q9CRD2|EMC2_MOUSE ER membrane protein complex subunit 2 OS=Mus musculus GN=Emc2 PE=2
SV=1
Length = 297
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Query: 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVA 66
D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+++P + KR++A
Sbjct: 70 DLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIA 129
Query: 67 IAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP 126
I KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EEL+++ P
Sbjct: 130 IRKAQGKTVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNH 189
Query: 127 LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNK 186
LY YA+V YT GG++N+ L++KY+A + L +N +ALFG+ + +S IA K K
Sbjct: 190 LYCQQYAEVKYTQGGLENLELSRKYFAQALKLN-NRNMRALFGLYMSASHIASNPKASAK 248
Query: 187 EDKESPELQSLAAAALEKDYK 207
K++ + S AA + + Y+
Sbjct: 249 MKKDNIKYASWAANQINRAYQ 269
>sp|B0BNG0|EMC2_RAT ER membrane protein complex subunit 2 OS=Rattus norvegicus GN=Emc2
PE=2 SV=1
Length = 297
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 125/201 (62%), Gaps = 1/201 (0%)
Query: 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVA 66
D+A C++ L++QFP S RV RL G+ EA + +A + Y +L+++P + KR++A
Sbjct: 70 DLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIA 129
Query: 67 IAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP 126
I KAQG AI LN+YLE F+ D +AW ELAE+Y++ Y +AAFC EEL+++ P
Sbjct: 130 IRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNH 189
Query: 127 LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNK 186
LY YA+V YT GG++N+ L++KY+A + L +N +ALFG+ + +S IA K K
Sbjct: 190 LYCQQYAEVKYTQGGLENLELSRKYFAQALKLN-NRNMRALFGLYMSASHIASNPKASAK 248
Query: 187 EDKESPELQSLAAAALEKDYK 207
K++ AA + + Y+
Sbjct: 249 MKKDNIRYAGWAANQINRAYQ 269
>sp|Q86K48|EMC2_DICDI ER membrane protein complex subunit 2 OS=Dictyostelium discoideum
GN=emc2 PE=3 SV=1
Length = 322
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 1 MDCQCLDVAKDCIKVLQKQF-PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPV 59
+DC K + L+ +F +S RV R+ + LE+ AEA + + S+L+ P D +
Sbjct: 84 LDCGDHTNPKKLFEQLKSKFGKDSVRVQRIHALCLESNNQLAEALQIFESILKKYPSDAL 143
Query: 60 LHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELI 119
KR+VAI K QGN AI+ LN YL+ +M D +AW EL+ ++S Y A +C EE++
Sbjct: 144 SMKRQVAIFKGQGNLSKAIQVLNAYLQIYMCDLEAWLELSSFHISYLSYSTALYCLEEVL 203
Query: 120 LSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTG 160
L+ P ++++ YA+ LY LGG +N A +YY ++L
Sbjct: 204 LNAPINFVFYIKYAEPLYCLGGNENYNSAVQYYTHALELNS 244
>sp|O60110|OCA3_SCHPO TPR repeat protein oca3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=oca3 PE=4 SV=3
Length = 282
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 8 VAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAI 67
+AK C L +F +S RV L G+ LEA +A Y+S L ++P V++KR++A+
Sbjct: 55 LAKKCWNRLNDRFHKSPRVEGLYGMFLEATASEKDAMSYYNSKLSEDPTHTVIYKRKLAL 114
Query: 68 AKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPL 127
++ G I+ L YL+TF D +AW ELA+IYVS++ ++ A FCYEE++L QP P
Sbjct: 115 LRSMGQTKECIQGLINYLDTFYNDLEAWAELADIYVSVEAFESAIFCYEEMVLLQPFEPR 174
Query: 128 YHLAYADVLYTLG--GVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182
D+ + L N + K+Y ++++ + FGI C + +L++
Sbjct: 175 LFARLGDLYFVLAQSNATNYWFSLKHYCRSVEIC-EEYFHGWFGISKCCQQLLELSR 230
>sp|Q6PD62|CTR9_HUMAN RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens
GN=CTR9 PE=1 SV=1
Length = 1173
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 33 LLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH 92
L EA + EAEK Y ++L ++P + R A+A+ +GNF A +W + L+
Sbjct: 506 LYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHP 565
Query: 93 DAWRELAEIYVSLQMYKQAAFCYEELILSQPTV 125
DAW + ++++ Q + +E IL QP+
Sbjct: 566 DAWSLIGNLHLAKQEWGPGQKKFER-ILKQPST 597
>sp|Q62018|CTR9_MOUSE RNA polymerase-associated protein CTR9 homolog OS=Mus musculus
GN=Ctr9 PE=1 SV=2
Length = 1173
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 33 LLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH 92
L EA + EAEK Y ++L ++P + R A+A+ +GNF A +W + L+
Sbjct: 506 LYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHP 565
Query: 93 DAWRELAEIYVSLQMYKQAAFCYEELILSQPTV 125
DAW + ++++ Q + +E IL QP
Sbjct: 566 DAWSLIGNLHLAKQEWGPGQKKFER-ILKQPAT 597
>sp|Q8BGB2|TTC7A_MOUSE Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1
SV=1
Length = 858
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVL 60
M+ + L A CI+ FP S V + G L E KG + EA++ Y L NP D V
Sbjct: 722 MEQRQLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGSFEEAKQLYKEALTVNP-DGVR 780
Query: 61 HKRRVAIAKAQ-GNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCY---E 116
+ + +Q G+ A + L +E H+AW+ L E+ + A C+
Sbjct: 781 IMHSLGLMLSQLGHKSLAQKVLRDAVERQSTFHEAWQGLGEVLQDQGQNEAAVDCFLTAL 840
Query: 117 ELILSQPTVPLYHLA 131
EL S P +P +A
Sbjct: 841 ELEASSPVLPFSIIA 855
>sp|Q9ULT0|TTC7A_HUMAN Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1
SV=3
Length = 858
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD-PV 59
M+ Q L A CI+ FP S V + G L E KG EA++ Y L NP +
Sbjct: 722 MEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRI 781
Query: 60 LHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCY---E 116
+H + +++ G+ A + L +E H+AW+ L E+ + + A C+
Sbjct: 782 MHSLGLMLSRL-GHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTAL 840
Query: 117 ELILSQPTVPL 127
EL S P +P
Sbjct: 841 ELEASSPVLPF 851
>sp|Q6DEU9|CTR9_XENTR RNA polymerase-associated protein CTR9 homolog OS=Xenopus
tropicalis GN=ctr9 PE=2 SV=1
Length = 1172
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 40 WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELA 99
+ E+EK Y ++L ++P + R A+A+ +GNF A +W + L+ DAW +
Sbjct: 513 FHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIG 572
Query: 100 EIYVSLQMYKQAAFCYEELILSQPTV 125
++++ Q + +E IL QP+
Sbjct: 573 NLHLAKQEWGPGQKKFER-ILKQPST 597
>sp|Q4QR29|CTR9_XENLA RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis
GN=ctr9 PE=2 SV=1
Length = 1157
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 40 WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELA 99
+ E+EK Y ++L ++P + R A+A+ +GNF A +W + L+ DAW +
Sbjct: 513 FHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIG 572
Query: 100 EIYVSLQMYKQAAFCYEELILSQPTV 125
++++ Q + +E IL QP+
Sbjct: 573 NLHLAKQEWGPGQKKFER-ILKQPST 597
>sp|P15150|C11B1_BOVIN Cytochrome P450 11B1, mitochondrial OS=Bos taurus GN=CYP11B1 PE=1
SV=2
Length = 503
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 81 LNKYLETFMADHDAWRELAEIYVSLQMYKQAAF--CYEELILSQPTVPLYHLAYADVLYT 138
L++++ T M WRE E + + Y A Y+EL L P +H Y+ ++
Sbjct: 244 LSRWMSTNM-----WREHFEAWDYIFQYANRAIQRIYQELALGHP----WH--YSGIVAE 292
Query: 139 LGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNKEDKESPELQSLA 198
L ++ L A+TIDLT G F + + +A RN E +++ +SL
Sbjct: 293 LLMRADMTL-DTIKANTIDLTAGSVDTTAFPLLMTLFELA-----RNPEVQQAVRQESLV 346
Query: 199 AAALEKDYKQRAPAKLLLLTSALK 222
A A + QRA +L LL +ALK
Sbjct: 347 AEARISENPQRAITELPLLRAALK 370
>sp|B3PCM8|RSMH_CELJU Ribosomal RNA small subunit methyltransferase H OS=Cellvibrio
japonicus (strain Ueda107) GN=rsmH PE=3 SV=1
Length = 309
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 23/129 (17%)
Query: 8 VAKDCIKVLQKQFPESKRVGRLEGILLE---AKGLWAEAEKAYSSLLEDNPLDPVLHKRR 64
+A D L+ E VGR++GILL+ + EAE+ + S ++D PLD + + R
Sbjct: 75 IAHDSFASLKNLAAERGLVGRVQGILLDLGVSSPQLDEAERGF-SFMQDGPLDMRMDQTR 133
Query: 65 VAIAKAQGNFPTAIEWLNKYLETFMADHDAW--RELAEIYVSLQMYKQAAFCYEELILSQ 122
P+A EW+N E D AW RE E + +M + A E +
Sbjct: 134 ---------GPSAAEWVNTASE----DEIAWVLREYGEERFAKRMAR--AIIAER--QKR 176
Query: 123 PTVPLYHLA 131
P V HLA
Sbjct: 177 PFVRTGHLA 185
>sp|P51663|C11B1_SHEEP Cytochrome P450 11B1, mitochondrial OS=Ovis aries GN=CYP11B1 PE=2
SV=2
Length = 503
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 95 WRELAEIYVSLQMYKQAAF--CYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYY 152
WRE E + + Y A Y+EL L P +H Y+ ++ L ++ L
Sbjct: 253 WREHFEAWDYIFQYANRAIQRIYQELALGHP----WH--YSGIVAELLMRADMTL-DTIK 305
Query: 153 ASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNKEDKESPELQSLAAAALEKDYKQRAPA 212
A+TIDLT G F + + +A RN E +++ +SL A A + QRA
Sbjct: 306 ANTIDLTAGSVDTTAFPLLMTLFELA-----RNPEVQQALRQESLVAEARISENPQRATT 360
Query: 213 KLLLLTSALK 222
+L LL +ALK
Sbjct: 361 ELPLLRAALK 370
>sp|Q57711|Y941_METJA TPR repeat-containing protein MJ0941 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0941 PE=4 SV=3
Length = 338
Score = 37.4 bits (85), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLED---NPLDPVLHKRRVAIAKAQGNFPTA 77
P K L+G+LL+ G + EA + + L+++ +D + H V++ A + A
Sbjct: 196 PHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHA--VSLMLALDDLKDA 253
Query: 78 IEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLY 137
++N LE D W E+Y L +A CYE++I QP L+ A +
Sbjct: 254 ERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPHYIKALLSKARIYE 313
Query: 138 TLGGVDNILLAKKYYASTID 157
G NI A +YY ++
Sbjct: 314 RQG---NIEAAIEYYNKAVE 330
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 29 LEGILLEAKGLWAEAEKAYSSLLEDNP--LDPVLHKRRVAIAKAQGNFPTAIEWLNKYLE 86
+G L E G EA K Y ++E P + +L K R I + QGN AIE+ NK +E
Sbjct: 273 FKGELYERLGKLDEALKCYEKVIELQPHYIKALLSKAR--IYERQGNIEAAIEYYNKAVE 330
Query: 87 TFMADH 92
DH
Sbjct: 331 NIHKDH 336
>sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1
Length = 1036
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 6 LDVAKDCIKV---LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHK 62
+D+A D + LQ FP++ L L E KG AEAE Y++ L P
Sbjct: 265 IDLAIDTYRRAIELQPHFPDA--YCNLANALKE-KGSVAEAEDCYNTALRLCPTHADSLN 321
Query: 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ 122
I + QGN A+ K LE F A LA + ++A Y+E I
Sbjct: 322 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 123 PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159
PT + AY+++ TL + ++ A + Y I +
Sbjct: 382 PT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 415
>sp|P81436|OGT1_RABIT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1
SV=2
Length = 1046
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 6 LDVAKDCIKV---LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHK 62
+D+A D + LQ FP++ L L E KG AEAE Y++ L P
Sbjct: 275 IDLAIDTYRRAIELQPHFPDA--YCNLANALKE-KGSVAEAEDCYNTALRLCPTHADSLN 331
Query: 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ 122
I + QGN A+ K LE F A LA + ++A Y+E I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 123 PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159
PT + AY+++ TL + ++ A + Y I +
Sbjct: 392 PT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 425
>sp|Q8CGY8|OGT1_MOUSE UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2
Length = 1046
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 6 LDVAKDCIKV---LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHK 62
+D+A D + LQ FP++ L L E KG AEAE Y++ L P
Sbjct: 275 IDLAIDTYRRAIELQPHFPDA--YCNLANALKE-KGSVAEAEDCYNTALRLCPTHADSLN 331
Query: 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ 122
I + QGN A+ K LE F A LA + ++A Y+E I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 123 PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159
PT + AY+++ TL + ++ A + Y I +
Sbjct: 392 PT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 425
>sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3
Length = 1046
Score = 37.4 bits (85), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 6 LDVAKDCIKV---LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHK 62
+D+A D + LQ FP++ L L E KG AEAE Y++ L P
Sbjct: 275 IDLAIDTYRRAIELQPHFPDA--YCNLANALKE-KGSVAEAEDCYNTALRLCPTHADSLN 331
Query: 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ 122
I + QGN A+ K LE F A LA + ++A Y+E I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 123 PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159
PT + AY+++ TL + ++ A + Y I +
Sbjct: 392 PT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 425
>sp|Q27HV0|OGT1_PIG UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1
Length = 1046
Score = 37.0 bits (84), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 6 LDVAKDCIKV---LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHK 62
+D+A D + LQ FP++ L L E KG AEAE Y++ L P
Sbjct: 275 IDLAIDTYRRAIELQPHFPDA--YCNLANALKE-KGSVAEAEDCYNTALRLCPTHADSLN 331
Query: 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ 122
I + QGN A+ K LE F A LA + ++A Y+E I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 123 PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159
PT + AY+++ TL + ++ A + Y I +
Sbjct: 392 PT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 425
>sp|Q29552|C11B1_PIG Cytochrome P450 11B1, mitochondrial OS=Sus scrofa GN=CYP11B1 PE=2
SV=1
Length = 503
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 94 AWRELAEIYVSLQMYKQAAF--CYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKY 151
W+E E + + Y A Y+EL L P +H Y+ V+ L N+ +
Sbjct: 252 TWKEHFEAWDCIFQYANKAIQRLYQELTLGHP----WH--YSGVVAELLTHANMTV-DAI 304
Query: 152 YASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNKEDKESPELQSLAAAALEKDYKQRAP 211
A++IDLT G + + + +A RN E +++ +SLAAAA + Q+A
Sbjct: 305 KANSIDLTAGSVDTTAYPLLMTLFELA-----RNPEVQQALRQESLAAAARISENPQKAI 359
Query: 212 AKLLLLTSALK 222
+L LL +ALK
Sbjct: 360 TELPLLRAALK 370
>sp|O06917|Y263_METJA TPR repeat-containing protein MJ0263 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0263 PE=4 SV=1
Length = 320
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRV 65
LD A DC+ + + L+G +L+ G EA A + N ++K
Sbjct: 164 LDEALDCVNKILSIKKDDAHAWYLKGRILKKLGNIKEALDALKMAINLNENLVHVYKDIA 223
Query: 66 AIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELI 119
+ A N+ A+ ++ KYLE F D +A LA IY +L A Y+++I
Sbjct: 224 YLELANNNYEEALNYITKYLEKFPNDVEAKFYLALIYENLNKVDDALKIYDKII 277
>sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC OS=Arabidopsis
thaliana GN=SEC PE=2 SV=1
Length = 977
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 31 GILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA 90
G L++A+GL EA Y + P + + G+ A+++ + ++ A
Sbjct: 196 GNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPA 255
Query: 91 DHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKK 150
DA+ L +Y +L +A CY+ + +P + A + Y G +D LA +
Sbjct: 256 FPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLD---LAIR 312
Query: 151 YY 152
+Y
Sbjct: 313 HY 314
>sp|P15705|STI1_YEAST Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STI1 PE=1 SV=1
Length = 589
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEW 80
PE RLEG K W A KAY+ +++ P D + R A +FP AI
Sbjct: 393 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIAD 452
Query: 81 LNKYLE 86
NK +E
Sbjct: 453 CNKAIE 458
>sp|Q9Y5Q9|TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens
GN=GTF3C3 PE=1 SV=1
Length = 886
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 10 KDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLL-----EDNPLDPVLHKRR 64
++ K+++++ P SK L G++ EA +A E+ + L+ PL
Sbjct: 130 RETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTL 189
Query: 65 VAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPT 124
I + QG+ ++++ +D + W LAE+ + KQA FCY + + +PT
Sbjct: 190 AMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPT 249
>sp|A7YE96|TT30A_DANRE Tetratricopeptide repeat protein 30A OS=Danio rerio GN=ttc30a PE=2
SV=2
Length = 651
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 71 QGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130
+G + AI L+K + A L Y +Q + AA CYE+L P V Y L
Sbjct: 21 EGRYGDAIHILSKEHQKHTKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEVEDYKL 80
Query: 131 AYADVLY 137
YA LY
Sbjct: 81 YYAQSLY 87
>sp|O34452|YRRB_BACSU TPR repeat-containing protein YrrB OS=Bacillus subtilis (strain
168) GN=yrrB PE=1 SV=1
Length = 206
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Query: 37 KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWR 96
+G + +A +A++ +E+N D + + + + A+ + +K LE + A+
Sbjct: 3 EGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYY 62
Query: 97 ELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGV----DNILLAKKYY 152
+YV +MYK+A +E+ + + + D+ Y LG V + LA Y
Sbjct: 63 GAGNVYVVKEMYKEAKDMFEKALRA-------GMENGDLFYMLGTVLVKLEQPKLALPYL 115
Query: 153 ASTIDLT-GGKNTKALFGICLCSSAI 177
++L + FG+CL + +
Sbjct: 116 QRAVELNENDTEARFQFGMCLANEGM 141
>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis
GN=tmtc2 PE=2 SV=1
Length = 836
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 31 GILLEAKGLWAEAEKAY---SSLLEDNPLDPVLHKRRVA--------IAKAQGNFPTAI- 78
GI+L +G EA + + S + ++N DP HK V + QG + A+
Sbjct: 568 GIILMNQGRTEEARRTFLKCSEIPDENLKDPNAHKSSVTSCLYNLGKLYHEQGQYEDALI 627
Query: 79 ---EWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADV 135
E + K F + + + E Y+ L + +A Y E + S+P HL Y +
Sbjct: 628 VYKEAIQKMPRQF-SPQSLYNMMGEAYMRLNVVSEAEHWYTESLKSKPDHIPAHLTYGKL 686
Query: 136 LYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGR 184
L TL G N A++Y+ I L K G C L +GR
Sbjct: 687 L-TLTGRKN--EAERYFLKAIQLDPNK------GNCYMHYGQFLLEEGR 726
>sp|Q6DFB8|TTC37_XENLA Tetratricopeptide repeat protein 37 OS=Xenopus laevis GN=ttc37 PE=2
SV=1
Length = 1564
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 68 AKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEE 117
++AQ + P +E L K + + H+AW LAE+Y SL M A CY +
Sbjct: 1377 SQAQISEPV-LEELKKTVLSNFTSHNAWHWLAEVYQSLGMMMDAEMCYRK 1425
>sp|Q8NEE8|TTC16_HUMAN Tetratricopeptide repeat protein 16 OS=Homo sapiens GN=TTC16 PE=2
SV=2
Length = 873
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 23/172 (13%)
Query: 33 LLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH 92
+L +G A + + +E+NPLDP L R + + F A+E K L+ D
Sbjct: 260 ILAVQGKLQHALQRINRAIENNPLDPSLFLFRGTMYRRLQEFDGAVEDFLKVLDMVTEDQ 319
Query: 93 D-----AWRELAEIY--VSLQMYKQAAFCYEELILS------QPTVPLYHLAYADVLYTL 139
+ A R+L Y ++ Y+Q A+ L+L+ Q LY + D + L
Sbjct: 320 EDMVRQAQRQLLLTYNDFAVHCYRQGAYQEGVLLLNKALRDEQQEKGLY-INRGDCFFQL 378
Query: 140 GGVDNILLAKKYYASTIDLTG---GKNTKALF---GICLCSSAIAQLTKGRN 185
G N+ A+ Y + L+ G NT+ + C Q K N
Sbjct: 379 G---NLAFAEADYQQALALSPQDEGANTRMGLLQEKMGFCEQRRKQFQKAEN 427
>sp|Q9FJW6|PP451_ARATH Pentatricopeptide repeat-containing protein At5g67570,
chloroplastic OS=Arabidopsis thaliana GN=DG1 PE=1 SV=2
Length = 798
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 32 ILLEAK--GLWAEAEKAYSSLLEDNPL-DPVLHKRRVAIAKAQGNFPTAIEWLNKY-LET 87
+L+EA G W+ E A+ ++LED + P+ + A A+G+F AI +N L +
Sbjct: 595 MLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALAS 654
Query: 88 FMADHDAWRELAEIYVSL----QMYKQAAFCYEELILSQPTV 125
F + W +L E + ++K + E +S+PTV
Sbjct: 655 FQISEEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTV 696
>sp|Q29527|C11B1_PAPHU Cytochrome P450 11B1, mitochondrial OS=Papio hamadryas ursinus
GN=CYP11B1 PE=3 SV=1
Length = 503
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 94 AWRELAEIYVSLQMYKQAAF--CYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKY 151
W+E E + + Y Y+EL LS+P Y A++L ++ L
Sbjct: 252 VWKEHFEAWDCIFQYGDNCIQKIYQELALSRPQQ--YTSIVAELL-----LNAELSPDAI 304
Query: 152 YASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNKEDKESPELQSLAAAALEKDYKQRAP 211
A++++LT G +F + + +A RN +++ +SLAAAA ++ Q+A
Sbjct: 305 KANSMELTAGSVDTTVFPLLMTLFELA-----RNPNVQQALRQESLAAAASISEHPQKAT 359
Query: 212 AKLLLLTSALK 222
+L LL +ALK
Sbjct: 360 TELPLLRAALK 370
>sp|Q95LZ5|TTC16_MACFA Tetratricopeptide repeat protein 16 OS=Macaca fascicularis GN=TTC16
PE=2 SV=1
Length = 872
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 33 LLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH 92
+L +G A + + +E+NPLDP R + + F A+E K L+ D
Sbjct: 260 ILAVQGRLQHALQRINCAIENNPLDPSFFLFRGTMYRRLQEFDGAVEDFLKVLDMVTEDQ 319
Query: 93 D-----AWRELAEIY--VSLQMYKQAAFCYEELILS------QPTVPLYHLAYADVLYTL 139
+ A R+L Y ++ Y+Q A+ L+L+ Q LY + D + L
Sbjct: 320 EDIMRQAQRQLLLTYNDFAVHCYRQGAYQEGVLLLNKALRDEQQEKGLY-INRGDCFFQL 378
Query: 140 GGVDNILLAKKYYASTIDLTG---GKNTK 165
G N+ A+ Y + L+ G NT+
Sbjct: 379 G---NLAFAEADYQQALALSPQDEGANTR 404
>sp|Q16JL4|TTC30_AEDAE Tetratricopeptide repeat protein 30 homolog OS=Aedes aegypti
GN=AAEL013294 PE=3 SV=1
Length = 659
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 98 LAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLG 140
L Y Q + +A+ CYE L+ P VP Y L YA L+ G
Sbjct: 49 LGHCYYQTQDFIEASNCYEYLVNLVPDVPEYKLYYAQSLFQAG 91
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 54 NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWR-------ELAEIYVSLQ 106
NP DP+L+ + I G + AI++ +K LE DAW +L +I +++
Sbjct: 245 NPDDPLLYLYKGIILNKLGKYNEAIKYFDKVLEINPNIPDAWNGKAIALEKLGKINEAIE 304
Query: 107 MYKQAAFCYE 116
Y +A YE
Sbjct: 305 CYNRALDIYE 314
>sp|O60184|CYC8_SCHPO General transcriptional corepressor ssn6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1
Length = 1102
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 31 GILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQG----NFPTAIEWLNKYLE 86
G + E + + A++AY +L + P + ++ + Q N AI++L K LE
Sbjct: 519 GHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLE 578
Query: 87 TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNIL 146
D +W + YV+ Q Y +A Y++ + P + + + Y + + L
Sbjct: 579 ADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDAL 638
Query: 147 LA 148
A
Sbjct: 639 DA 640
>sp|O77033|CYC8_DICDI General transcriptional corepressor trfA OS=Dictyostelium
discoideum GN=trfA PE=2 SV=1
Length = 1390
Score = 32.3 bits (72), Expect = 2.7, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 31 GILLEAKGLWAEAEKAYSSLLE-DNPLDPV--LHKRRVAIAKAQGNFPTAIEWLNKYLET 87
GIL + G + AE+A++++L+ DN + ++ R + K QG + ++E+ ++
Sbjct: 282 GILYDRYGSYDHAEEAFTAVLKMDNKFEKSTEIYFRLGVLYKHQGKYDQSLEYFQHLVKN 341
Query: 88 F---MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGV-- 142
+ D W ++ +Y + Y ++ YE+++ T ++ VL LG +
Sbjct: 342 PPLPLTTSDIWFQIGHVYELQKEYHKSKDAYEKVLKDNAT-------HSKVLQQLGWLYH 394
Query: 143 DNILLAKKYYA 153
N L + YA
Sbjct: 395 HNPLFTNQEYA 405
>sp|Q6INU8|TT30A_XENLA Tetratricopeptide repeat protein 30A OS=Xenopus laevis GN=ttc30a
PE=2 SV=1
Length = 651
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 71 QGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130
+ + AI+ L+ L+ L Y +Q + AA CYE+LI P V Y L
Sbjct: 21 EARYGEAIQVLSNELQKQYRSRAGLSLLGYCYYQIQDFVNAADCYEQLIQISPEVEEYKL 80
Query: 131 AYADVLY 137
YA LY
Sbjct: 81 YYAQSLY 87
>sp|P15538|C11B1_HUMAN Cytochrome P450 11B1, mitochondrial OS=Homo sapiens GN=CYP11B1 PE=1
SV=5
Length = 503
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 153 ASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNKEDKESPELQSLAAAALEKDYKQRAPA 212
A++++LT G +F + + +A RN +++ +SLAAAA ++ Q+A
Sbjct: 306 ANSMELTAGSVDTTVFPLLMTLFELA-----RNPNVQQALRQESLAAAASISEHPQKATT 360
Query: 213 KLLLLTSALK 222
+L LL +ALK
Sbjct: 361 ELPLLRAALK 370
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 23/169 (13%)
Query: 4 QCLDVAKDCIKVL-QKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL------ 56
+ ++ K CI ++ K+F +K + L LWA+ E + +L E +
Sbjct: 383 KAREIYKTCISIIPHKKFTFAK-------VWL----LWAKFEIRHGNLPEARKILGRGLG 431
Query: 57 ----DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAA 112
P L+K +A+ F + +KY+E F W E AE+ L ++A
Sbjct: 432 MSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERAR 491
Query: 113 FCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161
+ EL +SQP + + L + + +N A+ Y +D T G
Sbjct: 492 AIF-ELAVSQPEMEMPELVWKRFIEFEAEEENYDRARAIYRQLLDRTHG 539
>sp|A4IHR1|TT30A_XENTR Tetratricopeptide repeat protein 30A OS=Xenopus tropicalis
GN=ttc30a PE=2 SV=1
Length = 651
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 71 QGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130
+ + AI+ L+ L+ L Y +Q + AA CYE+LI P V Y L
Sbjct: 21 EARYGEAIQILSNELQKQYRSRAGLSLLGYCYYQIQDFVNAADCYEQLIQITPEVEEYKL 80
Query: 131 AYADVLY 137
YA LY
Sbjct: 81 YYAQSLY 87
>sp|Q9VK41|TTC30_DROME Tetratricopeptide repeat protein 30 homolog OS=Drosophila
melanogaster GN=CG5142 PE=2 SV=3
Length = 655
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 98 LAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLG 140
L Y Q Y++AA CYE+L P Y YA LY G
Sbjct: 49 LGHCYYHAQKYEEAATCYEQLCQLAPKEAKYRFYYAQSLYQAG 91
>sp|Q29L58|TTC30_DROPS Tetratricopeptide repeat protein 30 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA18687 PE=3 SV=1
Length = 654
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 98 LAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLG 140
L Y Q Y++AA CYE+L P Y YA LY G
Sbjct: 49 LGHCYYHAQKYEEAATCYEQLCQLAPKEAKYRFYYAQSLYQAG 91
>sp|Q7PRA4|TTC30_ANOGA Tetratricopeptide repeat protein 30 homolog OS=Anopheles gambiae
GN=AGAP002877 PE=3 SV=2
Length = 654
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 74 FPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYA 133
F AI LN E+ L Y Q + +AA CYE L+ P V Y L YA
Sbjct: 26 FQDAINTLNTIPES-STTRAGLSLLGHCYYQTQDFIEAANCYEHLLNLVPDVQEYRLYYA 84
Query: 134 DVLYTLGGVDNILLAKKYYASTID 157
L+ G + A+K A+ +D
Sbjct: 85 QSLFQAGLFEE---AQKIIATGLD 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,989,209
Number of Sequences: 539616
Number of extensions: 3106802
Number of successful extensions: 9143
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 9022
Number of HSP's gapped (non-prelim): 142
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)