Query 027158
Match_columns 227
No_of_seqs 349 out of 2779
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 09:12:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pl2_A Hypothetical conserved 100.0 2E-28 6.7E-33 180.7 21.4 177 2-183 17-204 (217)
2 3vtx_A MAMA; tetratricopeptide 100.0 5.1E-27 1.7E-31 168.3 20.9 160 2-165 17-176 (184)
3 2h6f_A Protein farnesyltransfe 99.9 9.3E-26 3.2E-30 179.3 20.0 172 3-178 110-288 (382)
4 4i17_A Hypothetical protein; T 99.9 1.3E-25 4.6E-30 166.3 18.0 167 2-172 19-222 (228)
5 4abn_A Tetratricopeptide repea 99.9 5.7E-25 2E-29 179.9 21.4 177 2-183 114-311 (474)
6 2pl2_A Hypothetical conserved 99.9 1.3E-24 4.6E-29 160.1 20.8 156 21-181 2-168 (217)
7 4gyw_A UDP-N-acetylglucosamine 99.9 3.4E-25 1.1E-29 188.5 19.6 157 2-161 21-177 (723)
8 3vtx_A MAMA; tetratricopeptide 99.9 2E-24 6.9E-29 154.7 20.8 157 21-181 2-158 (184)
9 4gyw_A UDP-N-acetylglucosamine 99.9 6.1E-25 2.1E-29 186.9 20.2 158 20-181 5-162 (723)
10 4eqf_A PEX5-related protein; a 99.9 5.5E-24 1.9E-28 167.9 22.7 176 3-182 78-299 (365)
11 2q7f_A YRRB protein; TPR, prot 99.9 3E-24 1E-28 159.7 19.2 174 2-179 35-208 (243)
12 3u4t_A TPR repeat-containing p 99.9 1.1E-23 3.8E-28 159.4 22.0 173 2-179 15-191 (272)
13 1w3b_A UDP-N-acetylglucosamine 99.9 6.5E-24 2.2E-28 168.9 21.5 178 2-183 181-358 (388)
14 1w3b_A UDP-N-acetylglucosamine 99.9 1E-23 3.5E-28 167.7 22.4 175 3-181 148-322 (388)
15 3uq3_A Heat shock protein STI1 99.9 1.1E-23 3.7E-28 157.9 19.2 175 2-181 17-224 (258)
16 2vq2_A PILW, putative fimbrial 99.9 1.8E-22 6.2E-27 148.1 25.4 173 2-178 20-196 (225)
17 4ga2_A E3 SUMO-protein ligase 99.9 1.2E-24 4E-29 151.3 12.6 139 3-141 10-149 (150)
18 2h6f_A Protein farnesyltransfe 99.9 5.4E-23 1.8E-27 163.4 23.4 172 3-179 144-324 (382)
19 2q7f_A YRRB protein; TPR, prot 99.9 3.9E-23 1.3E-27 153.7 21.1 169 2-174 69-237 (243)
20 1fch_A Peroxisomal targeting s 99.9 1.1E-22 3.7E-27 160.3 24.1 178 2-183 76-304 (368)
21 2ho1_A Type 4 fimbrial biogene 99.9 4E-23 1.4E-27 154.7 20.7 174 2-179 49-224 (252)
22 3qky_A Outer membrane assembly 99.9 1.7E-23 5.9E-28 158.1 18.4 177 2-182 27-250 (261)
23 3hym_B Cell division cycle pro 99.9 5.5E-23 1.9E-27 159.3 21.1 177 2-182 34-211 (330)
24 4i17_A Hypothetical protein; T 99.9 4.4E-22 1.5E-26 147.2 25.0 156 21-180 4-169 (228)
25 1fch_A Peroxisomal targeting s 99.9 1.5E-22 5.2E-27 159.4 23.8 176 2-181 110-347 (368)
26 3hym_B Cell division cycle pro 99.9 6E-23 2.1E-27 159.1 21.2 175 3-181 69-253 (330)
27 3ieg_A DNAJ homolog subfamily 99.9 7.5E-23 2.6E-27 160.1 21.7 177 2-182 15-206 (359)
28 2pzi_A Probable serine/threoni 99.9 7.4E-24 2.5E-28 180.2 16.7 170 2-176 403-580 (681)
29 3urz_A Uncharacterized protein 99.9 2.1E-23 7.1E-28 152.7 16.9 156 2-161 16-189 (208)
30 3uq3_A Heat shock protein STI1 99.9 6.4E-23 2.2E-27 153.6 19.3 166 2-171 50-254 (258)
31 4eqf_A PEX5-related protein; a 99.9 1.1E-22 3.9E-27 160.3 21.3 174 3-179 112-342 (365)
32 4ga2_A E3 SUMO-protein ligase 99.9 1.2E-24 4E-29 151.3 8.7 141 30-174 3-144 (150)
33 3as5_A MAMA; tetratricopeptide 99.9 1.2E-22 4.1E-27 144.6 19.2 156 3-161 21-176 (186)
34 4abn_A Tetratricopeptide repea 99.9 9.7E-23 3.3E-27 166.7 19.7 174 5-183 83-277 (474)
35 4gco_A Protein STI-1; structur 99.9 4.1E-23 1.4E-27 139.3 14.6 118 18-135 7-124 (126)
36 3ieg_A DNAJ homolog subfamily 99.9 2.1E-21 7E-26 151.9 25.2 178 2-183 132-325 (359)
37 3mkr_A Coatomer subunit epsilo 99.9 3.5E-21 1.2E-25 147.9 25.6 168 3-179 78-249 (291)
38 2y4t_A DNAJ homolog subfamily 99.9 4.7E-22 1.6E-26 160.7 20.4 177 2-182 38-229 (450)
39 2ho1_A Type 4 fimbrial biogene 99.9 3.2E-21 1.1E-25 144.4 23.2 161 2-166 83-245 (252)
40 1xnf_A Lipoprotein NLPI; TPR, 99.9 1.2E-21 4E-26 148.3 20.8 128 3-130 18-149 (275)
41 2vsy_A XCC0866; transferase, g 99.9 4.6E-22 1.6E-26 166.0 19.8 162 3-168 2-166 (568)
42 4gco_A Protein STI-1; structur 99.9 3.2E-22 1.1E-26 134.8 15.2 121 49-173 4-124 (126)
43 2y4t_A DNAJ homolog subfamily 99.9 9.9E-21 3.4E-25 153.0 26.5 173 3-179 190-378 (450)
44 3cv0_A Peroxisome targeting si 99.9 5.3E-22 1.8E-26 153.6 18.0 177 2-181 101-303 (327)
45 3cv0_A Peroxisome targeting si 99.9 6.8E-22 2.3E-26 153.0 18.1 177 2-182 33-258 (327)
46 2xpi_A Anaphase-promoting comp 99.9 6.5E-21 2.2E-25 159.3 24.7 175 3-181 318-492 (597)
47 2xpi_A Anaphase-promoting comp 99.9 3.5E-21 1.2E-25 160.9 22.5 177 3-182 352-534 (597)
48 2yhc_A BAMD, UPF0169 lipoprote 99.9 1.1E-21 3.7E-26 145.2 17.1 157 2-161 16-216 (225)
49 3fp2_A TPR repeat-containing p 99.9 1.9E-21 6.6E-26 160.3 19.5 177 2-182 288-480 (537)
50 2vq2_A PILW, putative fimbrial 99.9 1.8E-20 6E-25 137.5 22.4 162 2-167 54-219 (225)
51 3gyz_A Chaperone protein IPGC; 99.9 1.2E-22 4.3E-27 140.9 9.9 120 39-161 17-136 (151)
52 3qky_A Outer membrane assembly 99.9 7.9E-21 2.7E-25 143.4 20.4 159 18-179 9-200 (261)
53 3u4t_A TPR repeat-containing p 99.9 3.8E-21 1.3E-25 145.4 17.3 181 2-183 49-240 (272)
54 3urz_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 141.0 15.9 156 23-181 3-174 (208)
55 3mkr_A Coatomer subunit epsilo 99.9 1.9E-20 6.5E-25 143.8 19.9 155 2-165 113-270 (291)
56 2gw1_A Mitochondrial precursor 99.9 3.1E-21 1.1E-25 158.1 16.3 154 3-160 250-403 (514)
57 3fp2_A TPR repeat-containing p 99.9 9.9E-21 3.4E-25 156.1 19.3 174 4-182 216-396 (537)
58 3as5_A MAMA; tetratricopeptide 99.9 2.5E-20 8.5E-25 132.5 18.9 153 23-179 7-159 (186)
59 2r5s_A Uncharacterized protein 99.9 1.5E-21 5E-26 139.1 12.5 151 3-157 19-172 (176)
60 3gyz_A Chaperone protein IPGC; 99.9 2.1E-21 7.2E-26 134.7 12.2 115 12-126 24-138 (151)
61 2ond_A Cleavage stimulation fa 99.9 4.5E-20 1.5E-24 142.8 20.3 171 6-179 80-256 (308)
62 2ond_A Cleavage stimulation fa 99.9 2.7E-20 9.3E-25 144.0 18.7 171 7-181 33-220 (308)
63 2vgx_A Chaperone SYCD; alterna 99.9 6.2E-21 2.1E-25 132.1 13.4 128 44-175 7-134 (148)
64 2gw1_A Mitochondrial precursor 99.9 2.8E-20 9.7E-25 152.4 19.2 178 2-183 282-468 (514)
65 3qou_A Protein YBBN; thioredox 99.9 1.2E-20 4E-25 144.7 15.3 163 16-182 109-273 (287)
66 1qqe_A Vesicular transport pro 99.8 4.9E-20 1.7E-24 141.5 16.6 156 3-161 50-231 (292)
67 2fo7_A Synthetic consensus TPR 99.8 3.2E-19 1.1E-23 120.1 18.8 134 25-161 2-135 (136)
68 2vgx_A Chaperone SYCD; alterna 99.8 8.6E-21 3E-25 131.4 11.2 120 10-129 7-126 (148)
69 1p5q_A FKBP52, FK506-binding p 99.8 2.6E-21 8.9E-26 151.6 9.5 152 4-158 127-294 (336)
70 2xcb_A PCRH, regulatory protei 99.8 4.6E-20 1.6E-24 126.8 13.9 126 45-174 5-130 (142)
71 2yhc_A BAMD, UPF0169 lipoprote 99.8 1.8E-19 6.1E-24 133.2 17.6 156 23-181 3-201 (225)
72 2r5s_A Uncharacterized protein 99.8 3.1E-20 1.1E-24 132.2 13.1 156 20-179 2-159 (176)
73 3qou_A Protein YBBN; thioredox 99.8 2.2E-19 7.6E-24 137.6 18.3 154 2-158 129-284 (287)
74 3edt_B KLC 2, kinesin light ch 99.8 2.1E-20 7.3E-25 141.4 12.3 155 2-159 13-199 (283)
75 2xcb_A PCRH, regulatory protei 99.8 2.1E-20 7.2E-25 128.4 10.3 128 11-138 5-132 (142)
76 3upv_A Heat shock protein STI1 99.8 3.9E-19 1.3E-23 119.4 15.2 113 24-136 4-122 (126)
77 2e2e_A Formate-dependent nitri 99.8 1.7E-19 5.8E-24 128.2 14.1 124 35-161 21-147 (177)
78 2pzi_A Probable serine/threoni 99.8 8.6E-20 2.9E-24 155.3 14.6 157 19-183 389-553 (681)
79 4g1t_A Interferon-induced prot 99.8 5.9E-19 2E-23 143.5 18.8 180 3-183 151-353 (472)
80 3nf1_A KLC 1, kinesin light ch 99.8 1.6E-19 5.5E-24 138.6 14.0 156 2-160 39-226 (311)
81 4g1t_A Interferon-induced prot 99.8 7.1E-18 2.4E-22 137.2 24.3 174 2-179 106-296 (472)
82 1ouv_A Conserved hypothetical 99.8 7.4E-18 2.5E-22 127.8 22.7 160 3-176 19-194 (273)
83 1hh8_A P67PHOX, NCF-2, neutrop 99.8 3.6E-18 1.2E-22 124.6 19.9 131 25-161 7-153 (213)
84 1p5q_A FKBP52, FK506-binding p 99.8 6.7E-21 2.3E-25 149.2 5.6 171 5-181 80-281 (336)
85 3upv_A Heat shock protein STI1 99.8 1.1E-18 3.6E-23 117.2 15.1 118 55-176 1-124 (126)
86 2e2e_A Formate-dependent nitri 99.8 1.4E-18 4.7E-23 123.5 16.3 128 2-129 22-152 (177)
87 1a17_A Serine/threonine protei 99.8 3.3E-18 1.1E-22 119.7 18.0 135 23-160 12-148 (166)
88 3dra_A Protein farnesyltransfe 99.8 1.3E-17 4.3E-22 128.3 21.7 174 5-179 48-235 (306)
89 4a1s_A PINS, partner of inscut 99.8 7.1E-19 2.4E-23 140.5 15.4 178 2-182 60-281 (411)
90 3sz7_A HSC70 cochaperone (SGT) 99.8 5E-18 1.7E-22 119.2 17.6 124 54-181 7-132 (164)
91 2lni_A Stress-induced-phosphop 99.8 1.7E-18 5.7E-23 116.7 14.6 121 21-141 13-133 (133)
92 1qqe_A Vesicular transport pro 99.8 1.3E-18 4.3E-23 133.6 15.7 151 29-182 42-217 (292)
93 2fbn_A 70 kDa peptidylprolyl i 99.8 1.4E-19 4.7E-24 131.2 9.5 120 22-141 36-171 (198)
94 3edt_B KLC 2, kinesin light ch 99.8 8.5E-19 2.9E-23 132.6 14.0 155 2-159 55-282 (283)
95 2vyi_A SGTA protein; chaperone 99.8 3.4E-18 1.2E-22 114.6 15.2 122 20-141 8-129 (131)
96 3sz7_A HSC70 cochaperone (SGT) 99.8 2E-18 7E-23 121.2 14.3 116 21-136 8-123 (164)
97 1xnf_A Lipoprotein NLPI; TPR, 99.8 4.6E-18 1.6E-22 128.4 17.3 177 2-186 55-268 (275)
98 3ulq_A Response regulator aspa 99.8 1.3E-18 4.3E-23 138.4 14.7 156 2-160 115-295 (383)
99 1ouv_A Conserved hypothetical 99.8 8.2E-18 2.8E-22 127.5 18.5 160 3-176 55-230 (273)
100 3sf4_A G-protein-signaling mod 99.8 2.9E-18 9.8E-23 136.3 15.4 178 2-182 21-245 (406)
101 3nf1_A KLC 1, kinesin light ch 99.8 1.3E-18 4.5E-23 133.5 12.9 157 2-161 81-310 (311)
102 2vsy_A XCC0866; transferase, g 99.8 3.1E-18 1.1E-22 142.9 15.7 137 37-177 2-138 (568)
103 2fbn_A 70 kDa peptidylprolyl i 99.8 8.7E-19 3E-23 126.9 10.7 154 25-182 5-174 (198)
104 2fo7_A Synthetic consensus TPR 99.8 2.3E-17 7.8E-22 110.9 17.1 123 3-125 14-136 (136)
105 3ro2_A PINS homolog, G-protein 99.8 4.3E-18 1.5E-22 131.5 15.3 178 2-182 17-241 (338)
106 1na0_A Designed protein CTPR3; 99.8 3E-17 1E-21 108.9 17.4 117 24-140 9-125 (125)
107 1dce_A Protein (RAB geranylger 99.8 1.7E-17 5.7E-22 138.1 19.6 172 5-177 44-239 (567)
108 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 2.4E-19 8.2E-24 145.9 7.9 150 4-156 248-413 (457)
109 4gcn_A Protein STI-1; structur 99.8 7.6E-18 2.6E-22 113.5 13.7 99 25-123 9-114 (127)
110 3sf4_A G-protein-signaling mod 99.8 2.4E-18 8.2E-23 136.8 12.8 175 6-183 163-366 (406)
111 3q49_B STIP1 homology and U bo 99.8 1.3E-17 4.4E-22 113.2 13.9 121 54-177 5-129 (137)
112 3dss_A Geranylgeranyl transfer 99.8 2.6E-16 8.8E-21 121.8 22.6 171 6-177 90-285 (331)
113 1hxi_A PEX5, peroxisome target 99.8 1.3E-17 4.4E-22 111.3 13.4 101 26-126 19-119 (121)
114 2lni_A Stress-induced-phosphop 99.8 2.6E-17 8.9E-22 110.7 14.9 121 54-178 12-132 (133)
115 2ooe_A Cleavage stimulation fa 99.8 4E-17 1.4E-21 135.1 19.1 169 7-179 255-440 (530)
116 3rjv_A Putative SEL1 repeat pr 99.8 3.3E-17 1.1E-21 120.0 16.5 158 7-176 3-174 (212)
117 1elw_A TPR1-domain of HOP; HOP 99.8 6.4E-17 2.2E-21 106.3 16.4 113 24-136 4-116 (118)
118 4a1s_A PINS, partner of inscut 99.8 2.8E-18 9.5E-23 137.1 11.4 177 3-182 99-321 (411)
119 4gcn_A Protein STI-1; structur 99.8 1.2E-17 4.1E-22 112.5 12.8 102 57-161 7-115 (127)
120 3q49_B STIP1 homology and U bo 99.8 9.8E-17 3.4E-21 108.8 17.2 122 19-140 4-130 (137)
121 2ooe_A Cleavage stimulation fa 99.8 4.7E-17 1.6E-21 134.7 18.5 156 3-161 292-457 (530)
122 2vyi_A SGTA protein; chaperone 99.8 4E-17 1.4E-21 109.3 14.8 123 53-179 7-129 (131)
123 3dss_A Geranylgeranyl transfer 99.8 2.4E-16 8.2E-21 121.9 21.0 161 7-168 47-231 (331)
124 3u3w_A Transcriptional activat 99.8 1.4E-17 4.7E-22 127.8 14.1 156 2-160 87-268 (293)
125 3rkv_A Putative peptidylprolyl 99.8 7E-17 2.4E-21 113.1 16.6 119 59-181 12-149 (162)
126 3gw4_A Uncharacterized protein 99.8 2.1E-17 7.2E-22 119.4 14.3 174 1-179 3-195 (203)
127 2qfc_A PLCR protein; TPR, HTH, 99.8 1.4E-16 4.9E-21 122.2 19.7 156 2-160 87-268 (293)
128 2hr2_A Hypothetical protein; a 99.8 2.4E-17 8.2E-22 113.6 13.5 114 59-176 12-148 (159)
129 3q7a_A Farnesyltransferase alp 99.8 1.5E-16 5.1E-21 123.7 19.4 174 4-178 68-256 (349)
130 1hh8_A P67PHOX, NCF-2, neutrop 99.8 4.5E-17 1.5E-21 118.8 15.8 140 2-159 18-173 (213)
131 2ifu_A Gamma-SNAP; membrane fu 99.8 1.4E-17 4.8E-22 128.7 13.5 175 1-179 2-210 (307)
132 3dra_A Protein farnesyltransfe 99.7 2E-16 6.8E-21 121.6 19.1 169 5-177 84-271 (306)
133 2dba_A Smooth muscle cell asso 99.7 1.1E-16 3.8E-21 109.7 16.0 118 20-137 24-144 (148)
134 3rkv_A Putative peptidylprolyl 99.7 1.7E-17 6E-22 116.2 12.0 119 23-141 10-147 (162)
135 2c2l_A CHIP, carboxy terminus 99.7 2.1E-17 7.2E-22 126.2 13.3 145 21-171 1-176 (281)
136 3ro2_A PINS homolog, G-protein 99.7 8E-18 2.8E-22 130.0 11.0 178 2-182 55-281 (338)
137 2ifu_A Gamma-SNAP; membrane fu 99.7 2E-17 7E-22 127.8 13.1 154 3-161 49-226 (307)
138 1na0_A Designed protein CTPR3; 99.7 3.7E-16 1.3E-20 103.6 17.2 119 54-176 4-123 (125)
139 1hxi_A PEX5, peroxisome target 99.7 4.9E-17 1.7E-21 108.5 12.7 99 60-161 19-117 (121)
140 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 3.6E-18 1.2E-22 139.0 8.5 142 36-181 246-402 (457)
141 3q15_A PSP28, response regulat 99.7 7.5E-17 2.6E-21 128.0 15.9 157 2-161 113-293 (378)
142 1elw_A TPR1-domain of HOP; HOP 99.7 2.8E-16 9.5E-21 103.2 16.0 114 57-174 3-116 (118)
143 2hr2_A Hypothetical protein; a 99.7 2.7E-17 9.4E-22 113.3 11.3 107 24-130 11-140 (159)
144 1a17_A Serine/threonine protei 99.7 3.3E-16 1.1E-20 109.4 17.0 120 2-121 25-146 (166)
145 2xev_A YBGF; tetratricopeptide 99.7 3.2E-16 1.1E-20 105.1 16.2 116 25-140 3-124 (129)
146 1wao_1 Serine/threonine protei 99.7 3.7E-18 1.3E-22 139.5 7.6 135 24-161 6-153 (477)
147 2kck_A TPR repeat; tetratricop 99.7 8E-17 2.7E-21 105.0 11.7 104 54-160 2-108 (112)
148 2c2l_A CHIP, carboxy terminus 99.7 8.3E-17 2.8E-21 122.9 12.7 153 2-159 16-200 (281)
149 3rjv_A Putative SEL1 repeat pr 99.7 3.9E-16 1.3E-20 114.3 15.8 152 3-160 31-199 (212)
150 1elr_A TPR2A-domain of HOP; HO 99.7 3.4E-16 1.2E-20 104.8 14.0 112 25-137 5-123 (131)
151 2kck_A TPR repeat; tetratricop 99.7 1.5E-16 5.3E-21 103.6 11.7 107 20-126 2-111 (112)
152 3ulq_A Response regulator aspa 99.7 1.2E-16 4.2E-21 126.8 12.7 153 26-182 105-282 (383)
153 2if4_A ATFKBP42; FKBP-like, al 99.7 1.5E-17 5E-22 130.3 6.8 137 22-161 177-331 (338)
154 2dba_A Smooth muscle cell asso 99.7 1.2E-15 4E-20 104.5 15.4 118 52-173 22-142 (148)
155 1zu2_A Mitochondrial import re 99.7 2E-16 6.8E-21 108.8 11.3 96 36-131 14-130 (158)
156 1elr_A TPR2A-domain of HOP; HO 99.7 9E-16 3.1E-20 102.7 14.2 119 56-179 2-127 (131)
157 2xev_A YBGF; tetratricopeptide 99.7 2.2E-15 7.5E-20 101.0 14.8 105 60-168 4-114 (129)
158 1wao_1 Serine/threonine protei 99.7 2E-16 6.8E-21 129.3 11.0 124 2-125 18-154 (477)
159 2qfc_A PLCR protein; TPR, HTH, 99.7 3.2E-14 1.1E-18 109.0 22.6 154 23-179 74-251 (293)
160 1ihg_A Cyclophilin 40; ppiase 99.7 7.6E-16 2.6E-20 122.0 13.6 117 25-141 224-356 (370)
161 3k9i_A BH0479 protein; putativ 99.7 1.7E-16 5.9E-21 105.1 8.1 95 37-131 3-100 (117)
162 4f3v_A ESX-1 secretion system 99.7 2.6E-16 8.9E-21 118.7 9.2 174 3-180 19-224 (282)
163 1zu2_A Mitochondrial import re 99.7 1E-15 3.4E-20 105.3 10.2 98 70-171 14-132 (158)
164 3q15_A PSP28, response regulat 99.6 2.3E-15 7.8E-20 119.4 13.5 153 26-182 103-279 (378)
165 3e4b_A ALGK; tetratricopeptide 99.6 5.8E-15 2E-19 120.0 15.5 160 5-176 194-366 (452)
166 3k9i_A BH0479 protein; putativ 99.6 5.6E-16 1.9E-20 102.6 7.4 97 2-98 2-101 (117)
167 2xm6_A Protein corresponding t 99.6 5.4E-14 1.9E-18 115.2 20.7 159 4-176 237-411 (490)
168 1dce_A Protein (RAB geranylger 99.6 3.3E-16 1.1E-20 130.3 7.4 153 6-161 89-270 (567)
169 3ro3_A PINS homolog, G-protein 99.6 5.9E-15 2E-19 102.1 12.7 134 24-160 9-160 (164)
170 1hz4_A MALT regulatory protein 99.6 2.5E-14 8.7E-19 112.9 16.8 156 2-160 26-205 (373)
171 1ihg_A Cyclophilin 40; ppiase 99.6 1.7E-14 5.9E-19 114.2 15.4 120 58-181 223-358 (370)
172 2if4_A ATFKBP42; FKBP-like, al 99.6 1.1E-15 3.6E-20 119.8 8.2 127 1-127 190-334 (338)
173 2xm6_A Protein corresponding t 99.6 5.4E-13 1.8E-17 109.3 23.9 159 3-175 56-230 (490)
174 3u3w_A Transcriptional activat 99.6 4.2E-14 1.4E-18 108.4 14.7 148 29-179 80-251 (293)
175 3e4b_A ALGK; tetratricopeptide 99.6 1.2E-13 4.2E-18 112.2 17.7 158 6-176 161-330 (452)
176 3mv2_B Coatomer subunit epsilo 99.6 9E-14 3.1E-18 106.2 15.1 164 9-179 85-270 (310)
177 4f3v_A ESX-1 secretion system 99.6 3E-15 1E-19 113.0 6.8 132 26-161 104-240 (282)
178 2kat_A Uncharacterized protein 99.6 6.1E-14 2.1E-18 92.3 11.8 100 76-178 3-103 (115)
179 3q7a_A Farnesyltransferase alp 99.6 2.6E-13 8.8E-18 105.5 16.7 137 5-141 104-257 (349)
180 2kat_A Uncharacterized protein 99.5 1.7E-13 5.9E-18 90.1 12.4 96 42-137 3-100 (115)
181 1na3_A Designed protein CTPR2; 99.5 2.3E-13 7.8E-18 85.3 11.5 84 57-140 8-91 (91)
182 3gw4_A Uncharacterized protein 99.5 1E-12 3.5E-17 94.6 15.8 142 35-179 3-162 (203)
183 3mv2_B Coatomer subunit epsilo 99.5 8.7E-13 3E-17 100.8 15.5 153 3-164 113-287 (310)
184 2l6j_A TPR repeat-containing p 99.5 1.8E-14 6E-19 93.9 5.4 84 58-141 4-93 (111)
185 1hz4_A MALT regulatory protein 99.5 1E-12 3.6E-17 103.6 15.8 154 25-181 15-191 (373)
186 2l6j_A TPR repeat-containing p 99.5 1.6E-14 5.5E-19 94.1 4.4 95 23-117 3-103 (111)
187 3ro3_A PINS homolog, G-protein 99.5 3E-13 1E-17 93.4 11.0 123 2-124 21-161 (164)
188 1na3_A Designed protein CTPR2; 99.5 7.1E-13 2.4E-17 83.0 11.4 85 22-106 7-91 (91)
189 4b4t_Q 26S proteasome regulato 99.5 1.7E-12 5.6E-17 104.3 16.2 156 3-161 17-207 (434)
190 3ma5_A Tetratricopeptide repea 99.4 1.9E-12 6.5E-17 83.0 11.0 71 88-161 3-73 (100)
191 3ma5_A Tetratricopeptide repea 99.4 1.8E-12 6.1E-17 83.1 10.3 70 54-123 3-72 (100)
192 2kc7_A BFR218_protein; tetratr 99.4 9.2E-13 3.2E-17 84.0 7.9 89 62-161 4-93 (99)
193 1xi4_A Clathrin heavy chain; a 99.4 1.8E-11 6.2E-16 108.5 18.3 62 22-88 1103-1164(1630)
194 2kc7_A BFR218_protein; tetratr 99.4 1.1E-12 3.9E-17 83.6 8.1 91 27-125 3-94 (99)
195 1klx_A Cysteine rich protein B 99.4 2.3E-11 8E-16 82.7 14.2 110 39-159 10-127 (138)
196 3ly7_A Transcriptional activat 99.3 1.7E-10 5.7E-15 89.8 18.3 144 14-161 184-342 (372)
197 1klx_A Cysteine rich protein B 99.3 5E-11 1.7E-15 81.0 13.8 120 4-133 9-136 (138)
198 4e6h_A MRNA 3'-END-processing 99.3 7.1E-11 2.4E-15 100.0 17.3 162 7-172 326-512 (679)
199 4e6h_A MRNA 3'-END-processing 99.3 2.8E-10 9.6E-15 96.3 20.5 155 4-161 357-536 (679)
200 3n71_A Histone lysine methyltr 99.3 1.4E-11 4.7E-16 100.6 11.0 126 31-159 316-465 (490)
201 1b89_A Protein (clathrin heavy 99.3 6.2E-12 2.1E-16 100.2 8.6 154 4-177 75-254 (449)
202 3n71_A Histone lysine methyltr 99.3 3.5E-11 1.2E-15 98.2 11.2 121 2-122 321-465 (490)
203 3u64_A Protein TP_0956; tetrat 99.3 5.9E-10 2E-14 83.5 16.6 151 8-161 50-272 (301)
204 1b89_A Protein (clathrin heavy 99.3 4.8E-11 1.6E-15 95.2 11.4 162 2-182 134-300 (449)
205 3ly7_A Transcriptional activat 99.2 2.6E-10 8.9E-15 88.7 14.4 123 4-127 213-345 (372)
206 1xi4_A Clathrin heavy chain; a 99.2 3.8E-10 1.3E-14 100.4 17.1 156 2-174 1117-1324(1630)
207 3bee_A Putative YFRE protein; 99.2 2.6E-10 8.8E-15 71.8 10.8 71 54-124 2-75 (93)
208 4b4t_Q 26S proteasome regulato 99.2 3.9E-10 1.3E-14 90.5 13.1 156 24-182 4-193 (434)
209 1pc2_A Mitochondria fission pr 99.1 1.4E-09 4.8E-14 74.0 11.6 87 42-128 16-107 (152)
210 3bee_A Putative YFRE protein; 99.1 1.1E-09 3.9E-14 68.9 9.6 71 88-161 2-75 (93)
211 1pc2_A Mitochondria fission pr 99.1 5E-09 1.7E-13 71.2 12.1 102 74-179 14-120 (152)
212 2v5f_A Prolyl 4-hydroxylase su 99.0 6.5E-09 2.2E-13 66.9 11.7 73 95-171 8-87 (104)
213 2v5f_A Prolyl 4-hydroxylase su 99.0 1.4E-08 4.9E-13 65.2 12.0 78 57-134 4-88 (104)
214 3qww_A SET and MYND domain-con 99.0 4.4E-09 1.5E-13 84.6 10.6 94 36-129 310-424 (433)
215 2uy1_A Cleavage stimulation fa 98.9 8.7E-08 3E-12 78.6 17.9 144 7-155 196-380 (493)
216 3u64_A Protein TP_0956; tetrat 98.9 8.8E-09 3E-13 77.3 10.6 107 18-124 146-272 (301)
217 3qwp_A SET and MYND domain-con 98.9 1.4E-08 4.8E-13 81.7 11.9 95 34-128 297-412 (429)
218 4g26_A Pentatricopeptide repea 98.9 2.1E-06 7E-11 70.5 24.9 155 2-159 38-205 (501)
219 3qww_A SET and MYND domain-con 98.8 2E-08 6.7E-13 80.8 8.5 87 70-159 310-412 (433)
220 3qwp_A SET and MYND domain-con 98.7 3.6E-08 1.2E-12 79.3 8.5 101 3-103 300-424 (429)
221 2uy1_A Cleavage stimulation fa 98.6 4.4E-06 1.5E-10 68.5 18.8 146 3-157 226-412 (493)
222 1nzn_A CGI-135 protein, fissio 98.6 7.5E-07 2.6E-11 58.4 10.4 87 42-128 19-110 (126)
223 4h7y_A Dual specificity protei 98.6 4.4E-06 1.5E-10 56.1 13.5 119 53-177 8-140 (161)
224 4g26_A Pentatricopeptide repea 98.5 1.6E-05 5.6E-10 65.2 18.6 151 27-180 29-191 (501)
225 1nzn_A CGI-135 protein, fissio 98.5 3.5E-06 1.2E-10 55.2 11.5 101 73-177 16-121 (126)
226 4h7y_A Dual specificity protei 98.4 7E-06 2.4E-10 55.1 11.8 122 18-141 7-142 (161)
227 3ffl_A Anaphase-promoting comp 98.1 0.0001 3.4E-09 50.6 11.1 115 26-155 22-148 (167)
228 3ffl_A Anaphase-promoting comp 98.0 6.7E-05 2.3E-09 51.4 9.9 122 2-136 32-165 (167)
229 3o48_A Mitochondria fission 1 98.0 0.00023 7.7E-09 46.9 11.7 74 57-130 39-116 (134)
230 1y8m_A FIS1; mitochondria, unk 98.0 0.0006 2E-08 45.4 13.3 72 57-128 38-113 (144)
231 1y8m_A FIS1; mitochondria, unk 97.9 0.0011 3.8E-08 44.1 13.7 85 89-177 36-124 (144)
232 3o48_A Mitochondria fission 1 97.9 0.00038 1.3E-08 45.8 10.7 85 90-178 38-126 (134)
233 4gns_B Protein CSD3, chitin bi 97.8 0.00016 5.5E-09 61.8 10.4 112 6-118 265-397 (754)
234 4gns_B Protein CSD3, chitin bi 97.7 0.0008 2.7E-08 57.5 12.8 116 36-155 260-397 (754)
235 3mkq_B Coatomer subunit alpha; 97.2 0.011 3.9E-07 41.0 11.8 104 33-157 14-117 (177)
236 1ya0_A SMG-7 transcript varian 97.1 0.038 1.3E-06 45.1 15.9 81 94-178 154-234 (497)
237 1ya0_A SMG-7 transcript varian 97.1 0.0054 1.8E-07 50.1 10.9 79 60-138 154-232 (497)
238 2ff4_A Probable regulatory pro 97.1 0.021 7E-07 45.2 14.0 107 35-157 126-233 (388)
239 1zbp_A Hypothetical protein VP 97.0 0.032 1.1E-06 41.4 13.4 118 34-161 7-132 (273)
240 2ff4_A Probable regulatory pro 96.9 0.039 1.3E-06 43.6 13.7 97 69-182 126-223 (388)
241 3spa_A Mtrpol, DNA-directed RN 96.9 0.032 1.1E-06 49.3 13.9 98 59-159 128-231 (1134)
242 3mkq_B Coatomer subunit alpha; 96.8 0.061 2.1E-06 37.4 13.3 99 2-118 17-115 (177)
243 3mkq_A Coatomer beta'-subunit; 96.8 0.021 7.2E-07 49.1 12.8 108 31-154 659-774 (814)
244 3kae_A CDC27, possible protein 96.8 0.068 2.3E-06 36.8 15.8 98 21-123 30-145 (242)
245 1zbp_A Hypothetical protein VP 96.6 0.13 4.3E-06 38.3 14.0 118 1-125 8-133 (273)
246 3spa_A Mtrpol, DNA-directed RN 96.6 0.1 3.6E-06 46.2 15.3 97 26-122 129-231 (1134)
247 4b4t_R RPN7, 26S proteasome re 96.5 0.027 9.2E-07 45.2 10.8 101 23-123 130-239 (429)
248 4b4t_S RPN3, 26S proteasome re 96.5 0.0084 2.9E-07 48.8 7.5 123 1-125 147-303 (523)
249 4b4t_P 26S proteasome regulato 96.3 0.32 1.1E-05 39.2 20.0 152 4-158 30-247 (445)
250 4b4t_R RPN7, 26S proteasome re 96.3 0.11 3.7E-06 41.7 12.9 100 58-160 131-239 (429)
251 3mkq_A Coatomer beta'-subunit; 96.3 0.16 5.3E-06 43.7 14.7 106 28-152 633-746 (814)
252 3txn_A 26S proteasome regulato 96.1 0.29 1E-05 38.7 14.2 94 29-122 104-211 (394)
253 4fhn_B Nucleoporin NUP120; pro 96.0 0.23 7.8E-06 45.0 14.6 125 16-141 834-986 (1139)
254 3txn_A 26S proteasome regulato 95.8 0.55 1.9E-05 37.1 19.8 119 38-159 73-211 (394)
255 4b4t_P 26S proteasome regulato 95.7 0.34 1.1E-05 39.1 13.1 97 25-121 138-247 (445)
256 3kae_A CDC27, possible protein 95.6 0.32 1.1E-05 33.5 13.4 116 35-161 13-146 (242)
257 4b4t_S RPN3, 26S proteasome re 95.2 0.16 5.5E-06 41.5 9.6 126 31-161 143-302 (523)
258 4fhn_B Nucleoporin NUP120; pro 94.5 0.74 2.5E-05 41.7 13.2 119 29-154 817-963 (1139)
259 1qsa_A Protein (soluble lytic 94.5 0.74 2.5E-05 38.7 12.4 124 30-157 220-347 (618)
260 2wpv_A GET4, UPF0363 protein Y 92.0 3.2 0.00011 31.6 12.4 152 3-157 26-216 (312)
261 4gq2_M Nucleoporin NUP120; bet 90.2 3 0.0001 37.1 10.9 107 28-138 814-948 (950)
262 3lpz_A GET4 (YOR164C homolog); 90.0 5.4 0.00019 30.7 12.7 151 3-156 25-214 (336)
263 4gq2_M Nucleoporin NUP120; bet 89.1 12 0.00041 33.3 14.9 90 63-159 815-927 (950)
264 1wy6_A Hypothetical protein ST 85.1 6.5 0.00022 26.2 10.9 52 69-120 102-153 (172)
265 3ax2_A Mitochondrial import re 83.7 4.5 0.00015 23.4 5.6 32 28-59 21-52 (73)
266 1qsa_A Protein (soluble lytic 83.6 19 0.00064 30.3 19.4 140 6-151 268-435 (618)
267 2wpv_A GET4, UPF0363 protein Y 83.3 13 0.00045 28.3 13.1 27 124-153 132-158 (312)
268 3t5x_A PCI domain-containing p 83.2 3.6 0.00012 29.2 6.2 53 24-76 14-71 (203)
269 3ax2_A Mitochondrial import re 83.0 5 0.00017 23.2 5.6 29 97-125 22-50 (73)
270 2crb_A Nuclear receptor bindin 80.9 3.7 0.00013 24.9 4.6 28 92-119 15-42 (97)
271 2w2u_A Hypothetical P60 katani 80.3 3.8 0.00013 24.4 4.6 16 104-119 31-46 (83)
272 2v6y_A AAA family ATPase, P60 79.4 4.1 0.00014 24.2 4.6 16 104-119 23-38 (83)
273 3t5v_B Nuclear mRNA export pro 78.9 9.3 0.00032 30.8 7.9 87 39-125 141-254 (455)
274 3t5x_A PCI domain-containing p 77.9 7.4 0.00025 27.5 6.4 91 59-157 15-110 (203)
275 3lpz_A GET4 (YOR164C homolog); 77.8 22 0.00074 27.4 13.6 42 109-153 119-160 (336)
276 2ijq_A Hypothetical protein; s 76.0 16 0.00054 24.8 8.7 60 28-87 36-104 (161)
277 2cfu_A SDSA1; SDS-hydrolase, l 74.4 7.8 0.00027 32.9 6.6 50 92-141 449-498 (658)
278 3esl_A Checkpoint serine/threo 73.9 21 0.00071 25.2 11.5 78 79-160 58-146 (202)
279 2crb_A Nuclear receptor bindin 71.8 10 0.00035 23.0 4.8 26 60-85 17-42 (97)
280 3t5v_B Nuclear mRNA export pro 70.9 14 0.00049 29.7 7.0 85 74-161 142-253 (455)
281 3bu8_A Telomeric repeat-bindin 69.8 28 0.00094 24.9 8.3 64 7-70 89-160 (235)
282 2ijq_A Hypothetical protein; s 69.4 23 0.0008 24.0 8.2 60 96-158 36-104 (161)
283 1om2_A Protein (mitochondrial 68.6 7.4 0.00025 23.8 3.8 29 28-56 24-52 (95)
284 1om2_A Protein (mitochondrial 68.4 8.7 0.0003 23.5 4.1 28 97-124 25-52 (95)
285 3re2_A Predicted protein; meni 68.3 36 0.0012 26.6 8.2 64 57-120 254-324 (472)
286 3re2_A Predicted protein; meni 64.5 32 0.0011 26.9 7.3 45 111-158 276-325 (472)
287 4ady_A RPN2, 26S proteasome re 60.5 94 0.0032 27.8 13.2 111 8-120 472-588 (963)
288 2rpa_A Katanin P60 ATPase-cont 60.4 10 0.00034 22.3 3.2 23 97-119 17-39 (78)
289 2wvi_A Mitotic checkpoint seri 59.6 38 0.0013 23.0 11.1 74 78-160 43-127 (164)
290 4gq4_A Menin; tumor suppressor 58.9 64 0.0022 25.8 8.2 64 57-120 261-331 (489)
291 3esl_A Checkpoint serine/threo 58.9 45 0.0015 23.5 17.0 78 45-123 58-146 (202)
292 3u84_A Menin; MLL, JUND, ledgf 56.8 71 0.0024 25.6 8.1 43 77-119 298-345 (550)
293 3bqo_A Telomeric repeat-bindin 56.8 20 0.00068 25.3 4.6 37 31-67 124-160 (211)
294 4aez_C MAD3, mitotic spindle c 55.4 55 0.0019 23.5 9.1 50 75-124 131-182 (223)
295 4a5x_A MITD1, MIT domain-conta 55.3 26 0.00091 20.8 4.6 16 104-119 28-43 (86)
296 4ady_A RPN2, 26S proteasome re 53.0 1E+02 0.0035 27.6 9.4 21 97-117 495-515 (963)
297 4gq4_A Menin; tumor suppressor 51.9 65 0.0022 25.7 7.2 46 110-158 282-332 (489)
298 4a1g_A Mitotic checkpoint seri 51.2 52 0.0018 22.0 11.6 75 77-160 47-132 (152)
299 2rpa_A Katanin P60 ATPase-cont 50.9 17 0.00059 21.3 3.1 27 129-158 15-41 (78)
300 2cfu_A SDSA1; SDS-hydrolase, l 50.3 54 0.0018 27.8 7.3 47 61-107 452-498 (658)
301 3lxu_X Tripeptidyl-peptidase 2 49.1 1.7E+02 0.0059 27.3 14.4 30 6-35 1123-1152(1354)
302 2v6x_A Vacuolar protein sortin 48.5 39 0.0013 19.8 4.6 14 106-119 27-40 (85)
303 1wy6_A Hypothetical protein ST 48.0 59 0.002 21.7 14.1 125 29-160 12-156 (172)
304 1wfd_A Hypothetical protein 15 47.3 41 0.0014 20.3 4.6 12 106-117 29-40 (93)
305 3myv_A SUSD superfamily protei 45.4 74 0.0025 25.4 7.2 46 75-120 165-218 (454)
306 2dl1_A Spartin; SPG20, MIT, st 43.5 27 0.00091 22.2 3.4 16 74-89 19-34 (116)
307 2cpt_A SKD1 protein, vacuolar 42.9 46 0.0016 21.1 4.5 15 105-119 31-45 (117)
308 3kez_A Putative sugar binding 42.6 83 0.0028 25.2 7.1 46 75-120 171-224 (461)
309 3myv_A SUSD superfamily protei 41.2 77 0.0026 25.3 6.7 47 7-53 165-219 (454)
310 3lew_A SUSD-like carbohydrate 40.9 1.1E+02 0.0037 24.8 7.5 31 92-122 203-233 (495)
311 4b4t_O 26S proteasome regulato 40.9 1.3E+02 0.0044 23.5 8.7 85 4-88 90-199 (393)
312 2yhe_A SEC-alkyl sulfatase; hy 46.5 5.9 0.0002 33.7 0.0 48 94-141 463-510 (668)
313 3lew_A SUSD-like carbohydrate 40.1 96 0.0033 25.1 7.1 30 25-54 204-233 (495)
314 2p58_C Putative type III secre 40.0 67 0.0023 20.0 7.7 71 39-115 22-92 (116)
315 2uwj_G Type III export protein 40.0 66 0.0023 20.0 6.7 48 63-115 44-91 (115)
316 2w2u_A Hypothetical P60 katani 39.8 57 0.0019 19.2 6.6 22 31-52 26-47 (83)
317 1g1e_B SIN3A; four-helix bundl 37.4 66 0.0023 19.2 7.2 27 6-32 10-36 (89)
318 3kez_A Putative sugar binding 36.9 88 0.003 25.0 6.4 46 8-53 172-225 (461)
319 3mcx_A SUSD superfamily protei 35.8 98 0.0033 24.9 6.5 46 76-121 178-231 (477)
320 2v6y_A AAA family ATPase, P60 34.9 69 0.0024 18.7 6.6 21 32-52 19-39 (83)
321 3mcx_A SUSD superfamily protei 34.4 94 0.0032 25.0 6.2 46 8-53 178-231 (477)
322 3ph0_C ASCG; type III secretio 34.1 59 0.002 17.6 3.8 39 39-78 21-60 (61)
323 3u84_A Menin; MLL, JUND, ledgf 33.2 1.9E+02 0.0065 23.2 10.0 66 22-87 275-347 (550)
324 4b4t_O 26S proteasome regulato 33.1 1.7E+02 0.0059 22.8 11.5 90 31-120 83-197 (393)
325 4aez_C MAD3, mitotic spindle c 31.3 1.5E+02 0.005 21.3 9.4 74 79-161 98-182 (223)
326 3bu8_A Telomeric repeat-bindin 30.8 1.5E+02 0.0051 21.3 7.5 68 74-141 88-163 (235)
327 2qx5_A Nucleoporin NIC96; mRNA 27.7 2.8E+02 0.0097 23.6 9.4 21 103-124 549-569 (661)
328 3hdx_A SUSD homolog, SUSD supe 27.3 1.9E+02 0.0064 23.2 6.8 29 25-53 198-226 (478)
329 3bqo_A Telomeric repeat-bindin 27.0 57 0.002 23.0 3.1 25 67-91 126-150 (211)
330 3qnk_A Putative lipoprotein; a 26.3 2.1E+02 0.0073 23.2 7.1 30 92-121 182-211 (517)
331 2npu_A FKBP12-rapamycin comple 26.2 1.3E+02 0.0046 19.3 6.1 18 67-84 49-66 (126)
332 3qnk_A Putative lipoprotein; a 25.6 1.9E+02 0.0065 23.5 6.6 46 8-53 155-211 (517)
333 3jq1_A SUSD superfamily protei 24.2 1.4E+02 0.0048 24.0 5.6 46 7-52 155-208 (481)
334 2cwy_A Hypothetical protein TT 23.5 1.3E+02 0.0044 18.1 8.0 45 132-179 7-51 (94)
335 3ubw_A 14-3-3E, 14-3-3 protein 23.5 2.2E+02 0.0077 20.9 16.3 34 23-56 30-63 (261)
336 3hdx_A SUSD homolog, SUSD supe 22.8 2.1E+02 0.0073 22.9 6.4 30 92-121 197-226 (478)
337 3jq1_A SUSD superfamily protei 22.6 1.5E+02 0.005 23.9 5.3 46 75-120 155-208 (481)
338 3snx_A SUSD homolog, putative 22.1 1.1E+02 0.0036 24.6 4.4 31 24-54 191-221 (460)
339 3qtm_A Uncharacterized protein 21.3 2.3E+02 0.0079 21.2 5.5 67 74-140 101-199 (346)
340 4abx_A DNA repair protein RECN 20.5 1.6E+02 0.0054 19.9 4.5 49 110-161 74-122 (175)
341 2e2a_A Protein (enzyme IIA); h 20.2 1.5E+02 0.0051 18.4 3.8 31 22-52 18-48 (105)
342 3qtm_A Uncharacterized protein 20.1 2.8E+02 0.0095 20.7 17.6 57 145-207 272-328 (346)
No 1
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.97 E-value=2e-28 Score=180.66 Aligned_cols=177 Identities=13% Similarity=0.010 Sum_probs=166.3
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc----------
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ---------- 71 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~---------- 71 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 96 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERG 96 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhccc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHH
Q 027158 72 -GNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKK 150 (227)
Q Consensus 72 -~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~ 150 (227)
|++++|+..|+++++++|+++.+|..+|.++...|++++|+.+|++++.++ +++.++..+|.++...|+ +++|+.
T Consensus 97 ~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~---~~~A~~ 172 (217)
T 2pl2_A 97 KGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGR---LDEALA 172 (217)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTC---HHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCC---HHHHHH
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999 999999
Q ss_pred HHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcC
Q 027158 151 YYASTIDLTGGKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
.|+++++++|+ +..+++.++.++...++...+
T Consensus 173 ~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A 204 (217)
T 2pl2_A 173 QYAKALEQAPK-DLDLRVRYASALLLKGKAEEA 204 (217)
T ss_dssp HHHHHHHHSTT-CHHHHHHHHHHHTC-------
T ss_pred HHHHHHHhCCC-ChHHHHHHHHHHHHccCHHHH
Confidence 99999999996 999999999999888875543
No 2
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.96 E-value=5.1e-27 Score=168.30 Aligned_cols=160 Identities=17% Similarity=0.044 Sum_probs=155.1
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+.+++...|+++.++..+|.++...++++.|+..+
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 96 (184)
T 3vtx_A 17 TKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDAL 96 (184)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.+++..+|.++.++..+|.++...|++++|+.+|+++++.+|.++.++..+|.++..+|+ +++|+..|+++++++|+
T Consensus 97 ~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 97 QRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL---RDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTTHH
T ss_pred HHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC---HHHHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999999995
Q ss_pred Cchh
Q 027158 162 KNTK 165 (227)
Q Consensus 162 ~~~~ 165 (227)
++.
T Consensus 174 -~a~ 176 (184)
T 3vtx_A 174 -KAK 176 (184)
T ss_dssp -HHH
T ss_pred -CHH
Confidence 543
No 3
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.94 E-value=9.3e-26 Score=179.30 Aligned_cols=172 Identities=12% Similarity=0.061 Sum_probs=162.5
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGL-WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~-~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
.|++++|+..+++++..+|++..++..+|.++...|+ +++|+..|++++..+|++..+|..+|.++...|++++|+..|
T Consensus 110 ~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~ 189 (382)
T 2h6f_A 110 DERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFI 189 (382)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred CCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHH
Confidence 5889999999999999999999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCCCcHHHH-----HHHHHHH
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT-LGGVDNILLA-----KKYYAST 155 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~~~~A-----~~~~~~~ 155 (227)
+++++++|.+..+|.++|.++...|++++|+.+|++++.++|.+..+|.++|.++.. .|. .++| +.+|+++
T Consensus 190 ~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~---~~eA~~~~el~~~~~A 266 (382)
T 2h6f_A 190 ADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGY---NDRAVLEREVQYTLEM 266 (382)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCS---CSHHHHHHHHHHHHHH
T ss_pred HHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc---chHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 554 4777 5999999
Q ss_pred hhhcCCCchhHHHhHHHHHHHHH
Q 027158 156 IDLTGGKNTKALFGICLCSSAIA 178 (227)
Q Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~ 178 (227)
+.++|+ +..+++.++.++...+
T Consensus 267 l~l~P~-~~~a~~~l~~ll~~~g 288 (382)
T 2h6f_A 267 IKLVPH-NESAWNYLKGILQDRG 288 (382)
T ss_dssp HHHSTT-CHHHHHHHHHHHTTTC
T ss_pred HHHCCC-CHHHHHHHHHHHHccC
Confidence 999996 8888888887776643
No 4
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.94 E-value=1.3e-25 Score=166.28 Aligned_cols=167 Identities=11% Similarity=0.005 Sum_probs=151.8
Q ss_pred CCCChHHHHHHHHHHHHhCC-CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFP-ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEW 80 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~ 80 (227)
..|++++|+..|++++...| .+..+++.+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..
T Consensus 19 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~ 98 (228)
T 4i17_A 19 NAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIAT 98 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHH
Confidence 46899999999999999998 88888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCH-------HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHcCCCCcH------
Q 027158 81 LNKYLETFMADH-------DAWRELAEIYVSLQMYKQAAFCYEELILSQPT--VPLYHLAYADVLYTLGGVDNI------ 145 (227)
Q Consensus 81 ~~~~l~~~p~~~-------~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~~g~~~~~------ 145 (227)
|+++++.+|+++ .+|..+|.++...|++++|+.+|++++..+|+ ++.++..+|.++...|+ .
T Consensus 99 ~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~---~~~~~a~ 175 (228)
T 4i17_A 99 LTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGA---DVLRKAT 175 (228)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH---HHHHHHG
T ss_pred HHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 999999999998 66999999999999999999999999999999 88999999999999888 6
Q ss_pred ---------------------HHHHHHHHHHhhhcCCCchhHHHhHHH
Q 027158 146 ---------------------LLAKKYYASTIDLTGGKNTKALFGICL 172 (227)
Q Consensus 146 ---------------------~~A~~~~~~~~~~~~~~~~~~~~~l~~ 172 (227)
++|+.+|+++++++|+ +......+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~-~~~~~~~l~~ 222 (228)
T 4i17_A 176 PLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPN-RTEIKQMQDQ 222 (228)
T ss_dssp GGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CHHHHHHHHH
Confidence 8999999999999996 6655554443
No 5
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.94 E-value=5.7e-25 Score=179.85 Aligned_cols=177 Identities=16% Similarity=0.054 Sum_probs=170.3
Q ss_pred CCCCh-HHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc---------
Q 027158 2 DCQCL-DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ--------- 71 (227)
Q Consensus 2 ~~~~~-~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~--------- 71 (227)
..|++ ++|+..|++++..+|+++.++..+|.++...|++++|+..|+++++.+|+ ..++..+|.++...
T Consensus 114 ~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~ 192 (474)
T 4abn_A 114 VTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHS 192 (474)
T ss_dssp SSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHH
T ss_pred hccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhh
Confidence 57899 99999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred CChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc--------ccHHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHcC
Q 027158 72 GNFPTAIEWLNKYLETFMADHDAWRELAEIYVSL--------QMYKQAAFCYEELILSQP---TVPLYHLAYADVLYTLG 140 (227)
Q Consensus 72 ~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~--------~~~~~A~~~~~~al~~~p---~~~~~~~~la~~~~~~g 140 (227)
|++++|+..|+++++++|+++.+|..+|.++... |++++|+.+|++++.++| .++.++.++|.++...|
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g 272 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEE 272 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999 999999999999999999 99999999999999999
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcC
Q 027158 141 GVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 141 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
+ +++|+..|+++++++|+ +..++..++.++..+++...+
T Consensus 273 ~---~~~A~~~~~~al~l~p~-~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 273 S---YGEALEGFSQAAALDPA-WPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp C---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 9 99999999999999996 888999999999998876644
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.94 E-value=1.3e-24 Score=160.06 Aligned_cols=156 Identities=19% Similarity=0.143 Sum_probs=149.9
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAE 100 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~ 100 (227)
|+++.+++.+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|+++++++|+++.++..+|.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc-----------ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHh
Q 027158 101 IYVSL-----------QMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFG 169 (227)
Q Consensus 101 ~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 169 (227)
++... |++++|+..|++++..+|+++.++..+|.++...|+ +++|+..|+++++++ + ++..++.
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~-~-~~~~~~~ 156 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGE---RDKAEASLKQALALE-D-TPEIRSA 156 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHC-C-CHHHHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC---hHHHHHHHHHHHhcc-c-chHHHHH
Confidence 99999 999999999999999999999999999999999999 999999999999999 5 8899999
Q ss_pred HHHHHHHHHhhh
Q 027158 170 ICLCSSAIAQLT 181 (227)
Q Consensus 170 l~~~~~~~~~~~ 181 (227)
++.++...++..
T Consensus 157 la~~~~~~g~~~ 168 (217)
T 2pl2_A 157 LAELYLSMGRLD 168 (217)
T ss_dssp HHHHHHHHTCHH
T ss_pred HHHHHHHcCCHH
Confidence 999999988754
No 7
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.94 E-value=3.4e-25 Score=188.51 Aligned_cols=157 Identities=15% Similarity=0.084 Sum_probs=133.9
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
+.|++++|+..|+++++.+|++..++..+|.++...|++++|+..|+++++++|+++.++.++|.++...|++++|+..|
T Consensus 21 ~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~ 100 (723)
T 4gyw_A 21 EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCY 100 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 46788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+++++++|+++.+|.++|.++...|++++|+.+|+++++++|+++.++.++|.++..+|+ +++|.+.|++++++.|+
T Consensus 101 ~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~---~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 101 TRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD---WTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC---CTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc---HHHHHHHHHHHHHhChh
Confidence 888888888888888888888888888888888888888888888888888888888888 88888888888877653
No 8
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.94 E-value=2e-24 Score=154.68 Aligned_cols=157 Identities=18% Similarity=0.091 Sum_probs=150.6
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAE 100 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~ 100 (227)
++++.+++.+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+.+++...|.++.++..+|.
T Consensus 2 ge~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T 3vtx_A 2 GETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGS 81 (184)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhh
Q 027158 101 IYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQL 180 (227)
Q Consensus 101 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (227)
++...++++.|...+.+++..+|.++.++..+|.++...|+ +++|+..|+++++++|+ ++.+++.++.++..+++.
T Consensus 82 ~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~---~~~A~~~~~~~l~~~p~-~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGE---HDKAIEAYEKTISIKPG-FIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCC---chhHHHHHHHHHHhcch-hhhHHHHHHHHHHHCCCH
Confidence 99999999999999999999999999999999999999999 99999999999999996 999999999999988864
Q ss_pred h
Q 027158 181 T 181 (227)
Q Consensus 181 ~ 181 (227)
.
T Consensus 158 ~ 158 (184)
T 3vtx_A 158 D 158 (184)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.93 E-value=6.1e-25 Score=186.93 Aligned_cols=158 Identities=19% Similarity=0.214 Sum_probs=153.0
Q ss_pred CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHH
Q 027158 20 FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELA 99 (227)
Q Consensus 20 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la 99 (227)
.|+++.++..+|.++..+|++++|+..|+++++.+|++..++.++|.++...|++++|+..|+++++++|+++.+|+++|
T Consensus 5 ~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 5 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 100 EIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 100 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
.++...|++++|+.+|+++++++|++..++.++|.++..+|+ +++|+..|+++++++|+ +..++.+++.++..+++
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~---~~eAi~~~~~Al~l~P~-~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGN---IPEAIASYRTALKLKPD-FPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-ChHHHhhhhhHHHhccc
Confidence 999999999999999999999999999999999999999999 99999999999999996 99999999999988877
Q ss_pred hh
Q 027158 180 LT 181 (227)
Q Consensus 180 ~~ 181 (227)
+.
T Consensus 161 ~~ 162 (723)
T 4gyw_A 161 WT 162 (723)
T ss_dssp CT
T ss_pred HH
Confidence 54
No 10
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.93 E-value=5.5e-24 Score=167.91 Aligned_cols=176 Identities=13% Similarity=0.058 Sum_probs=159.1
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|+
T Consensus 78 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 157 (365)
T 4eqf_A 78 EGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALK 157 (365)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred HHHHHcC--------------------------------------------C--CHHHHHHHHHHHHHcccHHHHHHHHH
Q 027158 83 KYLETFM--------------------------------------------A--DHDAWRELAEIYVSLQMYKQAAFCYE 116 (227)
Q Consensus 83 ~~l~~~p--------------------------------------------~--~~~~~~~la~~~~~~~~~~~A~~~~~ 116 (227)
++++.+| . ++.++..+|.++...|++++|+.+|+
T Consensus 158 ~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 237 (365)
T 4eqf_A 158 NWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFN 237 (365)
T ss_dssp HHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 8776654 3 78889999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 117 ELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 117 ~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
+++..+|+++.++..+|.++...|+ +++|+..|+++++..|+ +..++..++.++...++...
T Consensus 238 ~al~~~p~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~ 299 (365)
T 4eqf_A 238 AALTVRPEDYSLWNRLGATLANGDR---SEEAVEAYTRALEIQPG-FIRSRYNLGISCINLGAYRE 299 (365)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHCCCHHH
Confidence 9999999999999999999999999 99999999999999995 88899999999988887543
No 11
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.93 E-value=3e-24 Score=159.73 Aligned_cols=174 Identities=14% Similarity=0.056 Sum_probs=162.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+
T Consensus 35 ~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 114 (243)
T 2q7f_A 35 EFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMF 114 (243)
T ss_dssp -------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+++++.+|.++.++..+|.++...|++++|+.++++++...|.++.++..+|.++...|+ +++|+..|+++++..|+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~~~~~~~~ 191 (243)
T 2q7f_A 115 EKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGM---LDEALSQFAAVTEQDPG 191 (243)
T ss_dssp HHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHCTT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999999995
Q ss_pred CchhHHHhHHHHHHHHHh
Q 027158 162 KNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~ 179 (227)
+...+..++.++...++
T Consensus 192 -~~~~~~~la~~~~~~~~ 208 (243)
T 2q7f_A 192 -HADAFYNAGVTYAYKEN 208 (243)
T ss_dssp -CHHHHHHHHHHHHHTTC
T ss_pred -cHHHHHHHHHHHHHccC
Confidence 88899999999887775
No 12
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.93 E-value=1.1e-23 Score=159.44 Aligned_cols=173 Identities=11% Similarity=0.048 Sum_probs=161.1
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHcCChHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD----PVLHKRRVAIAKAQGNFPTA 77 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~----~~~~~~l~~~~~~~~~~~~A 77 (227)
..|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++. .|.+ ..++..+|.++...|++++|
T Consensus 15 ~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A 93 (272)
T 3u4t_A 15 KNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLA 93 (272)
T ss_dssp TTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHH
Confidence 578999999999999999999999999999999999999999999999999 4443 45589999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 78 IEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 78 ~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
+..|+++++.+|.++.+|..+|.++...|++++|+.+|++++..+|.++.++..+|...+..++ +++|+..|+++++
T Consensus 94 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~a~~ 170 (272)
T 3u4t_A 94 IQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKE---YVKADSSFVKVLE 170 (272)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999955556668 9999999999999
Q ss_pred hcCCCchhHHHhHHHHHHHHHh
Q 027158 158 LTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
..|+ +...++.++.++..+++
T Consensus 171 ~~p~-~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 171 LKPN-IYIGYLWRARANAAQDP 191 (272)
T ss_dssp HSTT-CHHHHHHHHHHHHHHST
T ss_pred hCcc-chHHHHHHHHHHHHcCc
Confidence 9996 88899999999888865
No 13
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.93 E-value=6.5e-24 Score=168.88 Aligned_cols=178 Identities=18% Similarity=0.114 Sum_probs=164.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|
T Consensus 181 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 260 (388)
T 1w3b_A 181 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTY 260 (388)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+++++.+|.++.++..+|.++...|++++|+.+|++++..+|.++.++..+|.++...|+ +++|+..|+++++..|+
T Consensus 261 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~p~ 337 (388)
T 1w3b_A 261 RRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN---IEEAVRLYRKALEVFPE 337 (388)
T ss_dssp HHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC---HHHHHHHHHHHTTSCTT
T ss_pred HHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999999995
Q ss_pred CchhHHHhHHHHHHHHHhhhcC
Q 027158 162 KNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
+...+..++.++...++..++
T Consensus 338 -~~~~~~~l~~~~~~~g~~~~A 358 (388)
T 1w3b_A 338 -FAAAHSNLASVLQQQGKLQEA 358 (388)
T ss_dssp -CHHHHHHHHHHHHTTTCCHHH
T ss_pred -cHHHHHHHHHHHHHcCCHHHH
Confidence 888888888888877765543
No 14
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.93 E-value=1e-23 Score=167.72 Aligned_cols=175 Identities=17% Similarity=0.104 Sum_probs=139.5
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..|++++...|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|+
T Consensus 148 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 227 (388)
T 1w3b_A 148 LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYL 227 (388)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 57777888888888877887777788888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK 162 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~ 162 (227)
+++..+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|+ +++|+..|+++++..|+
T Consensus 228 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~p~- 303 (388)
T 1w3b_A 228 RALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGS---VAEAEDCYNTALRLCPT- 303 (388)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSC---HHHHHHHHHHHHHHCTT-
T ss_pred HHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCcc-
Confidence 88888888888888888888888888888888888888888888888888888888888 88888888888888875
Q ss_pred chhHHHhHHHHHHHHHhhh
Q 027158 163 NTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~ 181 (227)
+...+..++.++...++..
T Consensus 304 ~~~~~~~l~~~~~~~g~~~ 322 (388)
T 1w3b_A 304 HADSLNNLANIKREQGNIE 322 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHH
T ss_pred cHHHHHHHHHHHHHcCCHH
Confidence 7777777777776655543
No 15
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.1e-23 Score=157.87 Aligned_cols=175 Identities=15% Similarity=0.060 Sum_probs=165.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHcCCh
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD-------PVLHKRRVAIAKAQGNF 74 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~-------~~~~~~l~~~~~~~~~~ 74 (227)
..|++++|+..|++++..+ .++.++..+|.++...|++++|+..+++++..+|.+ +.++..+|.++...|++
T Consensus 17 ~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 95 (258)
T 3uq3_A 17 KARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDL 95 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccH
Confidence 4689999999999999999 899999999999999999999999999999998876 79999999999999999
Q ss_pred HHHHHHHHHHHH--------------------------HcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Q 027158 75 PTAIEWLNKYLE--------------------------TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLY 128 (227)
Q Consensus 75 ~~A~~~~~~~l~--------------------------~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 128 (227)
++|+..|++++. .+|.++.++..+|.++...|++++|+.+|++++..+|.++.+
T Consensus 96 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 175 (258)
T 3uq3_A 96 KKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARG 175 (258)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHH
Confidence 999999999999 566678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhh
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (227)
+..+|.++...|+ +++|+..|+++++.+|+ +...++.++.++...++..
T Consensus 176 ~~~l~~~~~~~~~---~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~ 224 (258)
T 3uq3_A 176 YSNRAAALAKLMS---FPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYA 224 (258)
T ss_dssp HHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCC---HHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhHH
Confidence 9999999999999 99999999999999996 8999999999999887633
No 16
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.92 E-value=1.8e-22 Score=148.13 Aligned_cols=173 Identities=13% Similarity=0.047 Sum_probs=161.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-CChHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ-GNFPTAIEW 80 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~-~~~~~A~~~ 80 (227)
..|++++|+..+++++...|+++.++..+|.++...|++++|+..+++++..+|.+..++..+|.++... |++++|+..
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~ 99 (225)
T 2vq2_A 20 RGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAY 99 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHH--HcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 81 LNKYLE--TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 81 ~~~~l~--~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
++++++ .+|.+..++..+|.++...|++++|+.++++++...|.++.++..+|.++...|+ +++|...++++++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 100 FDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQ---LGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHH
T ss_pred HHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCC---HHHHHHHHHHHHHh
Confidence 999999 6677789999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cC-CCchhHHHhHHHHHHHHH
Q 027158 159 TG-GKNTKALFGICLCSSAIA 178 (227)
Q Consensus 159 ~~-~~~~~~~~~l~~~~~~~~ 178 (227)
.| + ....+..++.++...+
T Consensus 177 ~~~~-~~~~~~~~~~~~~~~~ 196 (225)
T 2vq2_A 177 VEVL-QADDLLLGWKIAKALG 196 (225)
T ss_dssp HCSC-CHHHHHHHHHHHHHTT
T ss_pred CCCC-CHHHHHHHHHHHHhcC
Confidence 99 6 6666666655555444
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.92 E-value=1.2e-24 Score=151.31 Aligned_cols=139 Identities=14% Similarity=0.038 Sum_probs=100.9
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..+++++...|+++..++.+|.+|...|++++|+..|+++++.+|+++.+|..+|.++...|++++|+..|+
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~ 89 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYR 89 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 35667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHH-HHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFC-YEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~-~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
++++++|+++.+|..+|.++...|++++|... ++++++++|+++.++..++.++...|+
T Consensus 90 ~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 90 RSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 77777777777777777777777777665544 477777777777777777777766664
No 18
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.92 E-value=5.4e-23 Score=163.41 Aligned_cols=172 Identities=10% Similarity=0.050 Sum_probs=162.4
Q ss_pred CCC-hHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 3 CQC-LDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 3 ~~~-~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
.|+ +++|+..|++++..+|++..+|..+|.++...|++++|+..|++++.++|++..+|..+|.++...|++++|+.+|
T Consensus 144 ~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~ 223 (382)
T 2h6f_A 144 LQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYV 223 (382)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred cccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHH
Confidence 576 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHH-cccHHHH-----HHHHHHHHhhCCCCHHHHHHHHHHHHHcC--CCCcHHHHHHHHH
Q 027158 82 NKYLETFMADHDAWRELAEIYVS-LQMYKQA-----AFCYEELILSQPTVPLYHLAYADVLYTLG--GVDNILLAKKYYA 153 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~-~~~~~~A-----~~~~~~al~~~p~~~~~~~~la~~~~~~g--~~~~~~~A~~~~~ 153 (227)
+++++++|.+..+|+++|.++.. .|.+++| +.+|++++.++|++..+|..+|.++...| + +++|+..+.
T Consensus 224 ~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~~---~~~a~~~~~ 300 (382)
T 2h6f_A 224 DQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSK---YPNLLNQLL 300 (382)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGG---CHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCccc---hHHHHHHHH
Confidence 99999999999999999999999 5655777 59999999999999999999999999988 6 899999999
Q ss_pred HHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 154 STIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
++ +.+|+ +..++..++.++..+++
T Consensus 301 ~~-~~~p~-~~~al~~La~~~~~~~~ 324 (382)
T 2h6f_A 301 DL-QPSHS-SPYLIAFLVDIYEDMLE 324 (382)
T ss_dssp HH-TTTCC-CHHHHHHHHHHHHHHHH
T ss_pred Hh-ccCCC-CHHHHHHHHHHHHHHhc
Confidence 98 88885 88999999999988864
No 19
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.92 E-value=3.9e-23 Score=153.71 Aligned_cols=169 Identities=13% Similarity=0.021 Sum_probs=160.6
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++...|.+..++..+|.++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..+
T Consensus 69 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 148 (243)
T 2q7f_A 69 SVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYL 148 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
++++..+|.++.++..+|.++...|++++|+.++++++...|.++.++..+|.++...|+ +++|...|+++++.+|+
T Consensus 149 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~~~~~p~ 225 (243)
T 2q7f_A 149 QRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKEN---REKALEMLDKAIDIQPD 225 (243)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---TTHHHHHHHHHHHHCTT
T ss_pred HHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccC---HHHHHHHHHHHHccCcc
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999999996
Q ss_pred CchhHHHhHHHHH
Q 027158 162 KNTKALFGICLCS 174 (227)
Q Consensus 162 ~~~~~~~~l~~~~ 174 (227)
+..++..+..+.
T Consensus 226 -~~~~~~~~~~l~ 237 (243)
T 2q7f_A 226 -HMLALHAKKLLG 237 (243)
T ss_dssp -CHHHHHHHTC--
T ss_pred -hHHHHHHHHHHH
Confidence 777776665443
No 20
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.92 E-value=1.1e-22 Score=160.30 Aligned_cols=178 Identities=15% Similarity=0.077 Sum_probs=161.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+
T Consensus 76 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 155 (368)
T 1fch_A 76 QEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEIL 155 (368)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHHc-------------------------------------------------CC--CHHHHHHHHHHHHHcccHHH
Q 027158 82 NKYLETF-------------------------------------------------MA--DHDAWRELAEIYVSLQMYKQ 110 (227)
Q Consensus 82 ~~~l~~~-------------------------------------------------p~--~~~~~~~la~~~~~~~~~~~ 110 (227)
++++..+ |. ++.++..+|.++...|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~ 235 (368)
T 1fch_A 156 RDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDK 235 (368)
T ss_dssp HHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHH
Confidence 7666544 44 67888999999999999999
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcC
Q 027158 111 AAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 111 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
|+.+|++++..+|+++.++..+|.++...|+ +++|+..|++++++.|+ +..+++.++.++...++..++
T Consensus 236 A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A 304 (368)
T 1fch_A 236 AVDCFTAALSVRPNDYLLWNKLGATLANGNQ---SEEAVAAYRRALELQPG-YIRSRYNLGISCINLGAHREA 304 (368)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHH
Confidence 9999999999999999999999999999999 99999999999999995 888999999999988876543
No 21
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.92 E-value=4e-23 Score=154.73 Aligned_cols=174 Identities=15% Similarity=0.137 Sum_probs=165.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++..+|.+..++..+|.++...|++++|+.++
T Consensus 49 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 128 (252)
T 2ho1_A 49 QRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRL 128 (252)
T ss_dssp HTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH--HcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 82 NKYLE--TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 82 ~~~l~--~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
++++. ..|.++.++..+|.++...|++++|+.++++++...|.++.++..+|.++...|+ +++|...|+++++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~~~~~~ 205 (252)
T 2ho1_A 129 LEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKERE---YVPARQYYDLFAQGG 205 (252)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTS
T ss_pred HHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhC
Confidence 99999 8888999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCchhHHHhHHHHHHHHHh
Q 027158 160 GGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 160 ~~~~~~~~~~l~~~~~~~~~ 179 (227)
|+ ....+..++.++...++
T Consensus 206 ~~-~~~~~~~~~~~~~~~g~ 224 (252)
T 2ho1_A 206 GQ-NARSLLLGIRLAKVFED 224 (252)
T ss_dssp CC-CHHHHHHHHHHHHHTTC
T ss_pred cC-cHHHHHHHHHHHHHccC
Confidence 95 88888888888876664
No 22
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.92 E-value=1.7e-23 Score=158.06 Aligned_cols=177 Identities=14% Similarity=0.094 Sum_probs=139.6
Q ss_pred CCCChHHHHHHHHHHHHhCCCc---hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHH-----
Q 027158 2 DCQCLDVAKDCIKVLQKQFPES---KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD---PVLHKRRVAIAKA----- 70 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~l~~~~~~----- 70 (227)
..|++++|+..|++++..+|++ +.+++.+|.++...|++++|+..|+++++.+|++ +.+++.+|.++..
T Consensus 27 ~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~ 106 (261)
T 3qky_A 27 NQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPY 106 (261)
T ss_dssp HTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCT
T ss_pred HhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccc
Confidence 4678888888888888888877 7788888888888888888888888888887754 5678888888888
Q ss_pred ---cCChHHHHHHHHHHHHHcCCCHHHH-----------------HHHHHHHHHcccHHHHHHHHHHHHhhCCC---CHH
Q 027158 71 ---QGNFPTAIEWLNKYLETFMADHDAW-----------------RELAEIYVSLQMYKQAAFCYEELILSQPT---VPL 127 (227)
Q Consensus 71 ---~~~~~~A~~~~~~~l~~~p~~~~~~-----------------~~la~~~~~~~~~~~A~~~~~~al~~~p~---~~~ 127 (227)
.|++++|+..|++++..+|+++.++ +.+|.+|...|++++|+..|++++...|+ .+.
T Consensus 107 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~ 186 (261)
T 3qky_A 107 ELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADD 186 (261)
T ss_dssp TSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHH
T ss_pred cccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHH
Confidence 8888888888888888888876555 77788888888888888888888888887 456
Q ss_pred HHHHHHHHHHHc----------CCCCcHHHHHHHHHHHhhhcCCCc---hhHHHhHHHHHHHHHhhhc
Q 027158 128 YHLAYADVLYTL----------GGVDNILLAKKYYASTIDLTGGKN---TKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 128 ~~~~la~~~~~~----------g~~~~~~~A~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~ 182 (227)
+++.+|.++..+ |+ +++|+..|+++++..|+ + ..+...+..+...+++..+
T Consensus 187 a~~~l~~~~~~~g~~~~~~~~~~~---~~~A~~~~~~~~~~~p~-~~~~~~a~~~l~~~~~~~~~~~~ 250 (261)
T 3qky_A 187 ALVGAMRAYIAYAEQSVRARQPER---YRRAVELYERLLQIFPD-SPLLRTAEELYTRARQRLTELEG 250 (261)
T ss_dssp HHHHHHHHHHHHHHTSCGGGHHHH---HHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccchhhcccch---HHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHHHHHHHhhh
Confidence 788888888877 55 88888888888888886 4 3344455566666666544
No 23
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.92 E-value=5.5e-23 Score=159.33 Aligned_cols=177 Identities=12% Similarity=-0.005 Sum_probs=168.4
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-ChHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQG-NFPTAIEW 80 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~-~~~~A~~~ 80 (227)
..|++++|+..+++++..+|.+..++..++.++...|++++|+..++++++.+|+++.++..+|.++...| ++++|+..
T Consensus 34 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~ 113 (330)
T 3hym_B 34 YNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRY 113 (330)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 81 LNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 81 ~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
|++++..+|.++.+|..+|.++...|++++|+.+|++++...|.+..++..+|.++...|+ +++|+..|+++++..|
T Consensus 114 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~al~~~~ 190 (330)
T 3hym_B 114 LSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNN---SKLAERFFSQALSIAP 190 (330)
T ss_dssp HHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTCT
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCchhHHHhHHHHHHHHHhhhc
Q 027158 161 GKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
+ +...+..++.++...+++.+
T Consensus 191 ~-~~~~~~~l~~~~~~~~~~~~ 211 (330)
T 3hym_B 191 E-DPFVMHEVGVVAFQNGEWKT 211 (330)
T ss_dssp T-CHHHHHHHHHHHHHTTCHHH
T ss_pred C-ChHHHHHHHHHHHHcccHHH
Confidence 6 88899999999888776543
No 24
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.92 E-value=4.4e-22 Score=147.25 Aligned_cols=156 Identities=18% Similarity=0.141 Sum_probs=148.5
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHH
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNP-LDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELA 99 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la 99 (227)
+.++..++.+|.++...|++++|+..|++++..+| .+..++..+|.++...|++++|+..|++++..+|.++.+|..+|
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 83 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKS 83 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 45678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHcccHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC--chhHHHhH
Q 027158 100 EIYVSLQMYKQAAFCYEELILSQPTVP-------LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK--NTKALFGI 170 (227)
Q Consensus 100 ~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~l 170 (227)
.++...|++++|+.+|++++..+|+++ .++..+|.++...|+ +++|+..|+++++++| . +..+++.+
T Consensus 84 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p-~~~~~~~~~~l 159 (228)
T 4i17_A 84 AAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGN---IEKAEENYKHATDVTS-KKWKTDALYSL 159 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHTTSSC-HHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhcc---HHHHHHHHHHHHhcCC-CcccHHHHHHH
Confidence 999999999999999999999999999 669999999999999 9999999999999999 6 67899999
Q ss_pred HHHHHHHHhh
Q 027158 171 CLCSSAIAQL 180 (227)
Q Consensus 171 ~~~~~~~~~~ 180 (227)
+.++...+..
T Consensus 160 ~~~~~~~~~~ 169 (228)
T 4i17_A 160 GVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888774
No 25
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.92 E-value=1.5e-22 Score=159.42 Aligned_cols=176 Identities=14% Similarity=0.127 Sum_probs=159.5
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcC---------------------------
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDN--------------------------- 54 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--------------------------- 54 (227)
..|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+
T Consensus 110 ~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (368)
T 1fch_A 110 ENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILG 189 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTH
T ss_pred HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHH
Confidence 35788888999999888888888888888888888888888777777666554
Q ss_pred ----------------------CC--CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHH
Q 027158 55 ----------------------PL--DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQ 110 (227)
Q Consensus 55 ----------------------p~--~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~ 110 (227)
|. ++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++
T Consensus 190 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~ 269 (368)
T 1fch_A 190 SLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEE 269 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHH
Confidence 44 678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCc-----------hhHHHhHHHHHHHHHh
Q 027158 111 AAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKN-----------TKALFGICLCSSAIAQ 179 (227)
Q Consensus 111 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~~~~~ 179 (227)
|+.+|++++..+|.++.++..+|.++...|+ +++|+..|++++++.|+ . ...+..++.++..+++
T Consensus 270 A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 345 (368)
T 1fch_A 270 AVAAYRRALELQPGYIRSRYNLGISCINLGA---HREAVEHFLEALNMQRK-SRGPRGEGGAMSENIWSTLRLALSMLGQ 345 (368)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHT-C------CCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHhCCC-CCCccccccchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999 99999999999999996 5 7889999999999887
Q ss_pred hh
Q 027158 180 LT 181 (227)
Q Consensus 180 ~~ 181 (227)
..
T Consensus 346 ~~ 347 (368)
T 1fch_A 346 SD 347 (368)
T ss_dssp GG
T ss_pred hH
Confidence 54
No 26
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.92 E-value=6e-23 Score=159.09 Aligned_cols=175 Identities=11% Similarity=-0.022 Sum_probs=112.6
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKG-LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
.|++++|+..+++++..+|+++.++..+|.++...| ++++|+..+++++..+|.++.++..+|.++...|++++|+..|
T Consensus 69 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 148 (330)
T 3hym_B 69 LNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAY 148 (330)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHH
Confidence 356666666666666666666666666666666666 6666666666666666666666666666666666666666666
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc--
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT-- 159 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~-- 159 (227)
+++++..|.+..++..+|.++...|++++|+.++++++..+|.++.++..+|.++...|+ +++|+..|+++++..
T Consensus 149 ~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 149 FTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE---WKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc---HHHHHHHHHHHHHHhhh
Confidence 666666666666666666666666666666666666666666666666666666666666 666666666666654
Q ss_pred -------CCCchhHHHhHHHHHHHHHhhh
Q 027158 160 -------GGKNTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 160 -------~~~~~~~~~~l~~~~~~~~~~~ 181 (227)
| .....+..++.++...++..
T Consensus 226 ~~~~~~~~-~~~~~~~~la~~~~~~g~~~ 253 (330)
T 3hym_B 226 IGNEVTVD-KWEPLLNNLGHVCRKLKKYA 253 (330)
T ss_dssp TSCSCTTT-TCCHHHHHHHHHHHHTTCHH
T ss_pred cccccccc-HHHHHHHHHHHHHHHhcCHH
Confidence 3 24455556666655555444
No 27
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.92 E-value=7.5e-23 Score=160.07 Aligned_cols=177 Identities=14% Similarity=0.010 Sum_probs=167.5
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..|
T Consensus 15 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 94 (359)
T 3ieg_A 15 AAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDF 94 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcC---CCHHHHHHH------------HHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHH
Q 027158 82 NKYLETFM---ADHDAWREL------------AEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNIL 146 (227)
Q Consensus 82 ~~~l~~~p---~~~~~~~~l------------a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~ 146 (227)
+++++.+| .++.++..+ |.++...|++++|+.++++++...|.++.++..+|.++...|+ ++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 171 (359)
T 3ieg_A 95 KKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGE---PR 171 (359)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HH
T ss_pred HHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCC---HH
Confidence 99999999 888888877 7899999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 147 LAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
+|+..++++++..|+ +...+..++.++...++...
T Consensus 172 ~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~ 206 (359)
T 3ieg_A 172 KAISDLKAASKLKSD-NTEAFYKISTLYYQLGDHEL 206 (359)
T ss_dssp HHHHHHHHHHTTCSC-CHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHH
Confidence 999999999999996 88999999999988887554
No 28
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.91 E-value=7.4e-24 Score=180.24 Aligned_cols=170 Identities=16% Similarity=0.043 Sum_probs=162.9
Q ss_pred CCCChHHHHHHHHHHH--------HhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 027158 2 DCQCLDVAKDCIKVLQ--------KQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGN 73 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~--------~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~ 73 (227)
..|++++|+..+++++ ..+|++..+++.+|.++...|++++|+..|+++++.+|++..+++.+|.++...|+
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 482 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGD 482 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCC
Confidence 5789999999999999 88999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 027158 74 FPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYA 153 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~ 153 (227)
+++|+..|+++++++|+++.+|.++|.++...|++++ +.+|+++++.+|++..+++++|.++..+|+ +++|+..|+
T Consensus 483 ~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~---~~~A~~~~~ 558 (681)
T 2pzi_A 483 YDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGD---RVGAVRTLD 558 (681)
T ss_dssp HHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCC---HHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999 999999999
Q ss_pred HHhhhcCCCchhHHHhHHHHHHH
Q 027158 154 STIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
++++++|+ +..++++++.++..
T Consensus 559 ~al~l~P~-~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 559 EVPPTSRH-FTTARLTSAVTLLS 580 (681)
T ss_dssp TSCTTSTT-HHHHHHHHHHHTC-
T ss_pred hhcccCcc-cHHHHHHHHHHHHc
Confidence 99999995 88888888887644
No 29
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.91 E-value=2.1e-23 Score=152.70 Aligned_cols=156 Identities=12% Similarity=-0.014 Sum_probs=140.9
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHH----------------HHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRL----------------EGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRV 65 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~ 65 (227)
+.|++++|+..|++++..+|+++.+++. +|.++...|++++|+..|+++++.+|+++.++..+|
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 95 (208)
T 3urz_A 16 EAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACA 95 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 4799999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccc--HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCC
Q 027158 66 AIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQM--YKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVD 143 (227)
Q Consensus 66 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~--~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~ 143 (227)
.++...|++++|+..|+++++++|+++.+|..+|.+|+..|+ ...+...+++++...| ...+++.+|.++...|+
T Consensus 96 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~g~~~~~~~~-- 172 (208)
T 3urz_A 96 EMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTK-MQYARYRDGLSKLFTTR-- 172 (208)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCH-HHHHHHHHHHHHHHHHT--
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCc-hhHHHHHHHHHHHHccC--
Confidence 999999999999999999999999999999999999987764 5667788888764333 23467888999999999
Q ss_pred cHHHHHHHHHHHhhhcCC
Q 027158 144 NILLAKKYYASTIDLTGG 161 (227)
Q Consensus 144 ~~~~A~~~~~~~~~~~~~ 161 (227)
+++|+.+|++++++.|+
T Consensus 173 -~~~A~~~~~~al~l~P~ 189 (208)
T 3urz_A 173 -YEKARNSLQKVILRFPS 189 (208)
T ss_dssp -HHHHHHHHHHHTTTSCC
T ss_pred -HHHHHHHHHHHHHhCCC
Confidence 99999999999999995
No 30
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.4e-23 Score=153.61 Aligned_cols=166 Identities=11% Similarity=0.012 Sum_probs=154.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCc-------hhhHHHHHHHHHHcCCHHHHHHHHHHHHh----------------------
Q 027158 2 DCQCLDVAKDCIKVLQKQFPES-------KRVGRLEGILLEAKGLWAEAEKAYSSLLE---------------------- 52 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~l~---------------------- 52 (227)
..|++++|+..+++++...|++ +.++..+|.++...|++++|+..+++++.
T Consensus 50 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~ 129 (258)
T 3uq3_A 50 EKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAE 129 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHH
Confidence 3689999999999999998865 68999999999999999999999999999
Q ss_pred ----cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Q 027158 53 ----DNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLY 128 (227)
Q Consensus 53 ----~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 128 (227)
.+|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+.+|++++..+|+++.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 209 (258)
T 3uq3_A 130 AEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA 209 (258)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHH
Confidence 6777788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc------CCCchhHHHhHH
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDLT------GGKNTKALFGIC 171 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~l~ 171 (227)
+..+|.++...|+ +++|+..|++++++. |+ +...+..+.
T Consensus 210 ~~~l~~~~~~~g~---~~~A~~~~~~a~~~~~~~~~~p~-~~~~~~~l~ 254 (258)
T 3uq3_A 210 YIRKATAQIAVKE---YASALETLDAARTKDAEVNNGSS-AREIDQLYY 254 (258)
T ss_dssp HHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHTTTT-HHHHHHHHH
T ss_pred HHHHHHHHHHHhh---HHHHHHHHHHHHHhChhhcCCCc-hHHHHHHHH
Confidence 9999999999999 999999999999999 64 555554444
No 31
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.91 E-value=1.1e-22 Score=160.35 Aligned_cols=174 Identities=16% Similarity=0.126 Sum_probs=154.2
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcC----------------------------
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDN---------------------------- 54 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~---------------------------- 54 (227)
.|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++.+
T Consensus 112 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g 191 (365)
T 4eqf_A 112 NENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSS 191 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCH
T ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhh
Confidence 5788888888888888888888888888888888888888877777776654
Q ss_pred ----------------CC--CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHH
Q 027158 55 ----------------PL--DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYE 116 (227)
Q Consensus 55 ----------------p~--~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~ 116 (227)
|. ++.++..+|.++...|++++|+..|+++++.+|.++.+|..+|.++...|++++|+.+|+
T Consensus 192 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 271 (365)
T 4eqf_A 192 VLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYT 271 (365)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 44 788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC-----------chhHHHhHHHHHHHHHh
Q 027158 117 ELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK-----------NTKALFGICLCSSAIAQ 179 (227)
Q Consensus 117 ~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~ 179 (227)
+++..+|+++.++..+|.++...|+ +++|+..|++++++.|+. ....+..++.++..+++
T Consensus 272 ~al~~~p~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 342 (365)
T 4eqf_A 272 RALEIQPGFIRSRYNLGISCINLGA---YREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQ 342 (365)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTC
T ss_pred HHHhcCCCchHHHHHHHHHHHHCCC---HHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999999999 999999999999999851 24566777777776664
No 32
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.91 E-value=1.2e-24 Score=151.34 Aligned_cols=141 Identities=15% Similarity=0.054 Sum_probs=127.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHH
Q 027158 30 EGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYK 109 (227)
Q Consensus 30 ~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~ 109 (227)
+|.++...|++++|+..+++++..+|+++..++.+|.+|...|++++|+.+|+++++++|+++.+|..+|.++...|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 67888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHH-HHHHhhhcCCCchhHHHhHHHHH
Q 027158 110 QAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKY-YASTIDLTGGKNTKALFGICLCS 174 (227)
Q Consensus 110 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~-~~~~~~~~~~~~~~~~~~l~~~~ 174 (227)
+|+.+|+++++++|+++.++..+|.++...|+ +++|... ++++++++|+ ++.++.....+.
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~---~~~aa~~~~~~al~l~P~-~~~~~~l~~~ll 144 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDV---TDGRAKYWVERAAKLFPG-SPAVYKLKEQLL 144 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCS---SSSHHHHHHHHHHHHSTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHhCcC-CHHHHHHHHHHH
Confidence 99999999999999999999999999999999 9877765 5899999996 776665544433
No 33
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.91 E-value=1.2e-22 Score=144.58 Aligned_cols=156 Identities=15% Similarity=0.035 Sum_probs=150.5
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..+++++...|.++.++..+|.++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..++
T Consensus 21 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 100 (186)
T 3as5_A 21 AGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLI 100 (186)
T ss_dssp HTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+++..+|.++.++..+|.++...|++++|+.++++++...|.++.++..+|.++...|+ +++|...++++++..|+
T Consensus 101 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~~~~~~~ 176 (186)
T 3as5_A 101 KVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGR---HEEALPHFKKANELDEG 176 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHC
T ss_pred HHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCC---HHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999999886
No 34
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.91 E-value=9.7e-23 Score=166.67 Aligned_cols=174 Identities=10% Similarity=-0.003 Sum_probs=165.3
Q ss_pred ChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHH
Q 027158 5 CLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLW-AEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNK 83 (227)
Q Consensus 5 ~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 83 (227)
.+++++..++......|.++.+++.+|.++...|++ ++|+..|+++++.+|+++.+|..+|.++...|++++|+.+|++
T Consensus 83 ~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 162 (474)
T 4abn_A 83 EMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSG 162 (474)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 367788888888888899999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHc---------ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc--------CCCCcHH
Q 027158 84 YLETFMADHDAWRELAEIYVSL---------QMYKQAAFCYEELILSQPTVPLYHLAYADVLYTL--------GGVDNIL 146 (227)
Q Consensus 84 ~l~~~p~~~~~~~~la~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------g~~~~~~ 146 (227)
+++++|+ ..++..+|.++... |++++|+.+|++++..+|+++.++..+|.++... |+ ++
T Consensus 163 al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~---~~ 238 (474)
T 4abn_A 163 ALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKI---SQ 238 (474)
T ss_dssp HHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHH---HH
T ss_pred HHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccch---HH
Confidence 9999999 79999999999999 9999999999999999999999999999999999 99 99
Q ss_pred HHHHHHHHHhhhcC---CCchhHHHhHHHHHHHHHhhhcC
Q 027158 147 LAKKYYASTIDLTG---GKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 147 ~A~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
+|+..|+++++++| + ++.+++.++.++..++++..+
T Consensus 239 ~A~~~~~~al~~~p~~~~-~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 239 QALSAYAQAEKVDRKASS-NPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp HHHHHHHHHHHHCGGGGG-CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhCCCccc-CHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999 6 899999999999998876653
No 35
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.91 E-value=4.1e-23 Score=139.28 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=82.5
Q ss_pred HhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHH
Q 027158 18 KQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRE 97 (227)
Q Consensus 18 ~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~ 97 (227)
..+|+....+..+|..++..|++++|+..|+++++.+|.++.++..+|.++...|++++|+..|+++++++|+++.+|+.
T Consensus 7 ~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 86 (126)
T 4gco_A 7 YINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIR 86 (126)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 45566666666777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 027158 98 LAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADV 135 (227)
Q Consensus 98 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 135 (227)
+|.++...|++++|+..|+++++++|+++.++..++.+
T Consensus 87 lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 87 KAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 77777777777777777777777777777666666654
No 36
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.90 E-value=2.1e-21 Score=151.87 Aligned_cols=178 Identities=11% Similarity=0.038 Sum_probs=163.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..|
T Consensus 132 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 211 (359)
T 3ieg_A 132 DGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEV 211 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHH------------HHHHHHHHcccHHHHHHHHHHHHhhCCCCHH----HHHHHHHHHHHcCCCCcH
Q 027158 82 NKYLETFMADHDAWR------------ELAEIYVSLQMYKQAAFCYEELILSQPTVPL----YHLAYADVLYTLGGVDNI 145 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~------------~la~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~la~~~~~~g~~~~~ 145 (227)
+++++.+|+++.++. .+|.++...|++++|+..+++++...|+++. ++..+|.++...|+ +
T Consensus 212 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~ 288 (359)
T 3ieg_A 212 RECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEK---P 288 (359)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTC---H
T ss_pred HHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccC---H
Confidence 999999999988765 3488899999999999999999999999874 46678999999999 9
Q ss_pred HHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcC
Q 027158 146 LLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 146 ~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
++|+..|+++++.+|+ ++..++.++.++...++..++
T Consensus 289 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~A 325 (359)
T 3ieg_A 289 VEAIRICSEVLQMEPD-NVNALKDRAEAYLIEEMYDEA 325 (359)
T ss_dssp HHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999995 888999999999988876654
No 37
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.90 E-value=3.5e-21 Score=147.93 Aligned_cols=168 Identities=11% Similarity=-0.019 Sum_probs=153.4
Q ss_pred CCChHHHHHHHHHHHHh--CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQ--FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEW 80 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~--~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~ 80 (227)
.|++++|+..+++++.. +|+++.+++.+|.++...|++++|+..+++ |.++.++..+|.++...|++++|+..
T Consensus 78 ~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~ 152 (291)
T 3mkr_A 78 HSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKE 152 (291)
T ss_dssp STTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 57899999999999876 599999999999999999999999999988 89999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHH--HHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 81 LNKYLETFMADHDAWRELA--EIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 81 ~~~~l~~~p~~~~~~~~la--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
|+++++.+|++.......+ .++...|++++|+.+|++++..+|+++.++..+|.++...|+ +++|...|+++++.
T Consensus 153 l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~---~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 153 LKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGR---WEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHH
T ss_pred HHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHh
Confidence 9999999999875544433 334456899999999999999999999999999999999999 99999999999999
Q ss_pred cCCCchhHHHhHHHHHHHHHh
Q 027158 159 TGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 159 ~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+|+ ++.++.+++.++...++
T Consensus 230 ~p~-~~~~l~~l~~~~~~~g~ 249 (291)
T 3mkr_A 230 DSG-HPETLINLVVLSQHLGK 249 (291)
T ss_dssp CTT-CHHHHHHHHHHHHHTTC
T ss_pred CCC-CHHHHHHHHHHHHHcCC
Confidence 996 99999999998888664
No 38
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.90 E-value=4.7e-22 Score=160.73 Aligned_cols=177 Identities=14% Similarity=0.024 Sum_probs=163.5
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++...|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|
T Consensus 38 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 117 (450)
T 2y4t_A 38 AAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDF 117 (450)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCH---HHHHHH------------HHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHH
Q 027158 82 NKYLETFMADH---DAWREL------------AEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNIL 146 (227)
Q Consensus 82 ~~~l~~~p~~~---~~~~~l------------a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~ 146 (227)
+++++.+|.++ .++..+ |.++...|++++|+.+|++++...|.++.++..+|.++...|+ ++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~ 194 (450)
T 2y4t_A 118 KKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGE---PR 194 (450)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---GG
T ss_pred HHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC---HH
Confidence 99999999988 776655 6669999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 147 LAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
+|+..|+++++.+|+ ++..+..++.++...++...
T Consensus 195 ~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~ 229 (450)
T 2y4t_A 195 KAISDLKAASKLKND-NTEAFYKISTLYYQLGDHEL 229 (450)
T ss_dssp GGHHHHHHHHHHHCS-CHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHH
Confidence 999999999999995 88899999998888776543
No 39
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.90 E-value=3.2e-21 Score=144.37 Aligned_cols=161 Identities=14% Similarity=0.004 Sum_probs=154.9
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCChHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLE--DNPLDPVLHKRRVAIAKAQGNFPTAIE 79 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~~p~~~~~~~~l~~~~~~~~~~~~A~~ 79 (227)
..|++++|+..+++++...|.+..++..+|.++...|++++|+..+++++. ..|.+..++..+|.++...|++++|+.
T Consensus 83 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 162 (252)
T 2ho1_A 83 TEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKE 162 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 368999999999999999999999999999999999999999999999999 888899999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 80 WLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 80 ~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
.++++++.+|.++.++..+|.++...|++++|+.++++++...|.+..++..++.++...|+ +++|...++++++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 163 YFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFED---RDTAASYGLQLKRLY 239 (252)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccC---HHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCchhH
Q 027158 160 GGKNTKA 166 (227)
Q Consensus 160 ~~~~~~~ 166 (227)
|+ +...
T Consensus 240 p~-~~~~ 245 (252)
T 2ho1_A 240 PG-SLEY 245 (252)
T ss_dssp TT-SHHH
T ss_pred CC-CHHH
Confidence 96 5543
No 40
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.90 E-value=1.2e-21 Score=148.27 Aligned_cols=128 Identities=20% Similarity=0.094 Sum_probs=108.7
Q ss_pred CCChHHHHHHHHHHHHhC----CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQF----PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAI 78 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~----p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~ 78 (227)
.|++++|+..+++++... |.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~ 97 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 97 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHH
Confidence 467888888888888874 3567788888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHH
Q 027158 79 EWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130 (227)
Q Consensus 79 ~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 130 (227)
.+|++++..+|.++.++..+|.++...|++++|+.+|++++..+|+++....
T Consensus 98 ~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (275)
T 1xnf_A 98 EAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSL 149 (275)
T ss_dssp HHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHH
Confidence 8888888888888888888888888888888888888888888888764333
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.90 E-value=4.6e-22 Score=166.02 Aligned_cols=162 Identities=12% Similarity=-0.045 Sum_probs=137.9
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..+++++..+|++..++..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc---CCCCcHHHHHHHHHHHhhhc
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTL---GGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~---g~~~~~~~A~~~~~~~~~~~ 159 (227)
++++.+|+++.++..+|.++...|++++|+.+|+++++.+|+++.++..+|.++... |+ +++|...|+++++.+
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~---~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRA---LDVLSAQVRAAVAQG 158 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTT---HHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccc---HHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999 88 999999999999999
Q ss_pred CCCchhHHH
Q 027158 160 GGKNTKALF 168 (227)
Q Consensus 160 ~~~~~~~~~ 168 (227)
|+ ....+.
T Consensus 159 p~-~~~~~~ 166 (568)
T 2vsy_A 159 VG-AVEPFA 166 (568)
T ss_dssp CC-CSCHHH
T ss_pred Cc-ccChHH
Confidence 96 544443
No 42
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.89 E-value=3.2e-22 Score=134.85 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=113.4
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Q 027158 49 SLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLY 128 (227)
Q Consensus 49 ~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 128 (227)
++..++|+...++..+|..++..|++++|+..|+++++++|.++.+|.++|.++...|++++|+..|+++++++|+++.+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHH
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLC 173 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (227)
++.+|.++..+|+ +++|+..|+++++++|+ +..++.++..|
T Consensus 84 ~~~lg~~~~~~~~---~~~A~~~~~~al~l~P~-~~~a~~~l~~~ 124 (126)
T 4gco_A 84 YIRKAACLVAMRE---WSKAQRAYEDALQVDPS-NEEAREGVRNC 124 (126)
T ss_dssp HHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC---HHHHHHHHHHHHHHCcC-CHHHHHHHHHh
Confidence 9999999999999 99999999999999996 88888777655
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.89 E-value=9.9e-21 Score=152.95 Aligned_cols=173 Identities=10% Similarity=-0.051 Sum_probs=134.6
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHH------------HHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRR------------VAIAKA 70 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l------------~~~~~~ 70 (227)
.|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++..+|++..++..+ |.++..
T Consensus 190 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (450)
T 2y4t_A 190 EGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR 269 (450)
T ss_dssp TTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777777777777777777777777777777777777777777777777777777766555 777777
Q ss_pred cCChHHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHH
Q 027158 71 QGNFPTAIEWLNKYLETFMADHD----AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNIL 146 (227)
Q Consensus 71 ~~~~~~A~~~~~~~l~~~p~~~~----~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~ 146 (227)
.|++++|+..|++++...|.++. .+..+|.++...|++++|+.++++++..+|+++.++..+|.++...|+ ++
T Consensus 270 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~---~~ 346 (450)
T 2y4t_A 270 DGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEM---YD 346 (450)
T ss_dssp HTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HH
T ss_pred cCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcC---HH
Confidence 78888888888888887777743 677778888888888888888888888888888888888888888888 88
Q ss_pred HHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 147 LAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+|+..|++++++.|+ +...+..++.+...++.
T Consensus 347 ~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 347 EAIQDYETAQEHNEN-DQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp HHHHHHHHHHTTSSS-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcc-hHHHHHHHHHHHHHhhc
Confidence 888888888888885 77777777766666554
No 44
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.89 E-value=5.3e-22 Score=153.58 Aligned_cols=177 Identities=16% Similarity=0.145 Sum_probs=159.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHH--------------HH-HHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLE--------------GI-LLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVA 66 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~--------------a~-~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~ 66 (227)
..|++++|+..+++++...|.+...+..+ +. ++...|++++|+..+++++..+|.++.++..+|.
T Consensus 101 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 180 (327)
T 3cv0_A 101 NEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGV 180 (327)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 35788899999999998888887777766 66 6888899999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHH
Q 027158 67 IAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNIL 146 (227)
Q Consensus 67 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~ 146 (227)
++...|++++|+..++++++.+|.++.++..+|.++...|++++|+.+|++++...|.++.++..+|.++...|+ ++
T Consensus 181 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~---~~ 257 (327)
T 3cv0_A 181 LYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQ---YD 257 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcc---HH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHhhhcCCC-----------chhHHHhHHHHHHHHHhhh
Q 027158 147 LAKKYYASTIDLTGGK-----------NTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~ 181 (227)
+|+..|+++++..|+. ....+..++.++..+++..
T Consensus 258 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 303 (327)
T 3cv0_A 258 LAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPD 303 (327)
T ss_dssp HHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHH
Confidence 9999999999999952 5778888888888877644
No 45
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.89 E-value=6.8e-22 Score=152.95 Aligned_cols=177 Identities=16% Similarity=0.115 Sum_probs=148.6
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+
T Consensus 33 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 112 (327)
T 3cv0_A 33 KLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASL 112 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999988888877777766
Q ss_pred HHHHH-------------------------------------------------HcCCCHHHHHHHHHHHHHcccHHHHH
Q 027158 82 NKYLE-------------------------------------------------TFMADHDAWRELAEIYVSLQMYKQAA 112 (227)
Q Consensus 82 ~~~l~-------------------------------------------------~~p~~~~~~~~la~~~~~~~~~~~A~ 112 (227)
++++. .+|.++.++..+|.++...|++++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 192 (327)
T 3cv0_A 113 RAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAA 192 (327)
T ss_dssp HHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHH
Confidence 66554 45556677778888888888888888
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 113 FCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 113 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
.++++++..+|+++.++..+|.++...|+ +++|+..|+++++..|+ +...++.++.++...++..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~g~~~~ 258 (327)
T 3cv0_A 193 ANLRRAVELRPDDAQLWNKLGATLANGNR---PQEALDAYNRALDINPG-YVRVMYNMAVSYSNMSQYDL 258 (327)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhccHHH
Confidence 88888888888888888888888888888 88888888888888885 77788888888877766543
No 46
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.89 E-value=6.5e-21 Score=159.26 Aligned_cols=175 Identities=16% Similarity=0.035 Sum_probs=127.8
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..|++++...|++..++..++.++...|++++|...+++++...|+++.++..+|.++...|++++|+..|+
T Consensus 318 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 397 (597)
T 2xpi_A 318 RSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFS 397 (597)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 57777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK 162 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~ 162 (227)
++++.+|.+..+|..+|.++...|++++|+.+|++++...|.+..++..+|.++...|+ +++|+..|+++++..|+
T Consensus 398 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~~~~~~~~- 473 (597)
T 2xpi_A 398 KSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGN---ILLANEYLQSSYALFQY- 473 (597)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHCCC-
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-
Confidence 77777777777777777777777777777777777777777777777777777777777 77777777777777774
Q ss_pred chhHHHhHHHHHHHHHhhh
Q 027158 163 NTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~ 181 (227)
++..+..++.++.+.++..
T Consensus 474 ~~~~~~~l~~~~~~~g~~~ 492 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQ 492 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHH
T ss_pred ChHHHHHHHHHHHHhCCHH
Confidence 6666666666666655543
No 47
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.89 E-value=3.5e-21 Score=160.88 Aligned_cols=177 Identities=12% Similarity=-0.018 Sum_probs=110.1
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|...+++++...|++..++..+|.++...|++++|+..|+++++.+|.+..+|..++.++...|++++|+..|+
T Consensus 352 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 431 (597)
T 2xpi_A 352 SGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYT 431 (597)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh----
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL---- 158 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~---- 158 (227)
+++...|.++.+|..+|.+|...|++++|+.+|++++...|.++.++..+|.++...|+ +++|+..|+++++.
T Consensus 432 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~~~~~~~~~ 508 (597)
T 2xpi_A 432 TAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSD---MQTAINHFQNALLLVKKT 508 (597)
T ss_dssp HHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHS
T ss_pred HHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhhhcc
Confidence 66666666666666666666666666666666666666666666666666666666666 66666666666665
Q ss_pred --cCCCchhHHHhHHHHHHHHHhhhc
Q 027158 159 --TGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 159 --~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
+|+.....+..++.++...++...
T Consensus 509 ~~~p~~~~~~~~~l~~~~~~~g~~~~ 534 (597)
T 2xpi_A 509 QSNEKPWAATWANLGHAYRKLKMYDA 534 (597)
T ss_dssp CCCSGGGHHHHHHHHHHHHHTTCHHH
T ss_pred ccchhhHHHHHHHHHHHHHHhcCHHH
Confidence 332114555556655555554443
No 48
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.89 E-value=1.1e-21 Score=145.22 Aligned_cols=157 Identities=13% Similarity=0.021 Sum_probs=141.5
Q ss_pred CCCChHHHHHHHHHHHHhCCCch---hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHH-----
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK---RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPV---LHKRRVAIAKA----- 70 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~---~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~---~~~~l~~~~~~----- 70 (227)
..|++++|+..|++++..+|.++ .+++.+|.++...|++++|+..|+++++.+|+++. +++.+|.++..
T Consensus 16 ~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~ 95 (225)
T 2yhc_A 16 QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA 95 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence 46899999999999999999764 68999999999999999999999999999998864 78889988876
Q ss_pred -------------cCChHHHHHHHHHHHHHcCCCHHHH-----------------HHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 71 -------------QGNFPTAIEWLNKYLETFMADHDAW-----------------RELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 71 -------------~~~~~~A~~~~~~~l~~~p~~~~~~-----------------~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
.|++++|+..|+++++.+|+++.++ ..+|.+|...|++++|+..|++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 175 (225)
T 2yhc_A 96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLR 175 (225)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 5789999999999999999987554 5789999999999999999999999
Q ss_pred hCCCCH---HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 121 SQPTVP---LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 121 ~~p~~~---~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
..|+++ .++..+|.++..+|+ +++|+..++++....|+
T Consensus 176 ~~p~~~~~~~a~~~l~~~~~~~g~---~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 176 DYPDTQATRDALPLMENAYRQMQM---NAQAEKVAKIIAANSSN 216 (225)
T ss_dssp HSTTSHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHCCSC
T ss_pred HCcCCCccHHHHHHHHHHHHHcCC---cHHHHHHHHHHHhhCCC
Confidence 999886 679999999999999 99999999999888886
No 49
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.88 E-value=1.9e-21 Score=160.34 Aligned_cols=177 Identities=14% Similarity=0.059 Sum_probs=118.8
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+
T Consensus 288 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 367 (537)
T 3fp2_A 288 DKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFF 367 (537)
T ss_dssp CSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45666667777777766666666666667777777777777777777777666666666666777777777777777777
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHH------HHHHHHHHHHHc----------CCCCcH
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPL------YHLAYADVLYTL----------GGVDNI 145 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~la~~~~~~----------g~~~~~ 145 (227)
+++++.+|.++.++..+|.++...|++++|+.+|++++...|+++. .+..+|.++... |+ +
T Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~ 444 (537)
T 3fp2_A 368 NETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEK---F 444 (537)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHH---H
T ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhH---H
Confidence 7777777766666667777777777777777777776666554332 244555666666 66 7
Q ss_pred HHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 146 LLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 146 ~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
++|+..|+++++.+|+ +..++..++.++...++..+
T Consensus 445 ~~A~~~~~~a~~~~p~-~~~~~~~l~~~~~~~g~~~~ 480 (537)
T 3fp2_A 445 NAAIKLLTKACELDPR-SEQAKIGLAQLKLQMEKIDE 480 (537)
T ss_dssp HHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHH
Confidence 7777777777777774 66677777777766665443
No 50
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.88 E-value=1.8e-20 Score=137.48 Aligned_cols=162 Identities=17% Similarity=0.100 Sum_probs=153.4
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHc-CCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCChHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAK-GLWAEAEKAYSSLLE--DNPLDPVLHKRRVAIAKAQGNFPTAI 78 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~-~~~~~A~~~~~~~l~--~~p~~~~~~~~l~~~~~~~~~~~~A~ 78 (227)
..|++++|+..+++++...|.+..++..+|.++... |++++|+..+++++. ..|.+..++..+|.++...|++++|+
T Consensus 54 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 133 (225)
T 2vq2_A 54 YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAE 133 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHH
Confidence 368999999999999999999999999999999999 999999999999999 66777899999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 79 EWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQP-TVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 79 ~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
..++++++.+|.++.++..+|.++...|++++|+.++++++...| .++.++..++.++...|+ .+.|..+++.+.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 134 AYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGN---AQAAYEYEAQLQA 210 (225)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCc---HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 999999999999999999 9999999999999
Q ss_pred hcCCCchhHH
Q 027158 158 LTGGKNTKAL 167 (227)
Q Consensus 158 ~~~~~~~~~~ 167 (227)
..|+ ++...
T Consensus 211 ~~p~-~~~~~ 219 (225)
T 2vq2_A 211 NFPY-SEELQ 219 (225)
T ss_dssp HCTT-CHHHH
T ss_pred hCCC-CHHHH
Confidence 9996 55443
No 51
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.88 E-value=1.2e-22 Score=140.91 Aligned_cols=120 Identities=13% Similarity=-0.060 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 027158 39 LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEEL 118 (227)
Q Consensus 39 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 118 (227)
++-.+-..+++++..+|+++.+++.+|.++...|++++|+..|++++.++|.++.+|..+|.++...|++++|+.+|+++
T Consensus 17 ~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33334456778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 119 ILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 119 l~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+.++|+++.+++++|.++..+|+ +++|+..|++++++.|+
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~---~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKA---PLKAKECFELVIQHSND 136 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCCC
T ss_pred HhhCCCCcHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999 99999999999999996
No 52
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.88 E-value=7.9e-21 Score=143.42 Aligned_cols=159 Identities=14% Similarity=0.068 Sum_probs=146.4
Q ss_pred HhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC---
Q 027158 18 KQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD---PVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD--- 91 (227)
Q Consensus 18 ~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~--- 91 (227)
...|.++..++.+|..+...|++++|+..|++++..+|++ +.+++.+|.++...|++++|+..|++++..+|++
T Consensus 9 ~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 88 (261)
T 3qky_A 9 RLRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRV 88 (261)
T ss_dssp --CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchh
Confidence 4578899999999999999999999999999999999999 8999999999999999999999999999998865
Q ss_pred HHHHHHHHHHHHH--------cccHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHHcCCCCcHH
Q 027158 92 HDAWRELAEIYVS--------LQMYKQAAFCYEELILSQPTVPLYH-----------------LAYADVLYTLGGVDNIL 146 (227)
Q Consensus 92 ~~~~~~la~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~la~~~~~~g~~~~~~ 146 (227)
+.+++.+|.++.. .|++++|+..|++++...|+++.+. +.+|.++...|+ ++
T Consensus 89 ~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~---~~ 165 (261)
T 3qky_A 89 PQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERREL---YE 165 (261)
T ss_dssp HHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HH
T ss_pred HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---HH
Confidence 6789999999999 9999999999999999999987665 888999999999 99
Q ss_pred HHHHHHHHHhhhcCCC--chhHHHhHHHHHHHHHh
Q 027158 147 LAKKYYASTIDLTGGK--NTKALFGICLCSSAIAQ 179 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~ 179 (227)
+|+..|+++++..|++ ...+++.++.++..++.
T Consensus 166 ~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~ 200 (261)
T 3qky_A 166 AAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAE 200 (261)
T ss_dssp HHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcc
Confidence 9999999999999962 45788999999998865
No 53
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.88 E-value=3.8e-21 Score=145.41 Aligned_cols=181 Identities=20% Similarity=0.196 Sum_probs=142.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhh----HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRV----GRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTA 77 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~----~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A 77 (227)
..|++++|+..+++++. .|.++.. +..+|.++...|++++|+..|+++++.+|.++.++..+|.++...|++++|
T Consensus 49 ~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 127 (272)
T 3u4t_A 49 ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLA 127 (272)
T ss_dssp HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHH
Confidence 36788888888888888 4444433 788888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 78 IEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 78 ~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
+..|+++++.+|.++.+|..+|...+..+++++|+.+|++++..+|+++.++..+|.++...|+..++++|+..|+++++
T Consensus 128 ~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 207 (272)
T 3u4t_A 128 IQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIE 207 (272)
T ss_dssp HHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHH
Confidence 88888888888888888888884555556888888888888888888888888888888888765446678888888887
Q ss_pred hc---CCC----chhHHHhHHHHHHHHHhhhcC
Q 027158 158 LT---GGK----NTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 158 ~~---~~~----~~~~~~~l~~~~~~~~~~~~~ 183 (227)
.. |+. ...++..++.++...++..++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 240 (272)
T 3u4t_A 208 VCAPGGAKYKDELIEANEYIAYYYTINRDKVKA 240 (272)
T ss_dssp HHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHcCCHHHH
Confidence 75 421 135677778888777776654
No 54
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.87 E-value=3.3e-21 Score=140.95 Aligned_cols=156 Identities=13% Similarity=0.014 Sum_probs=134.8
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHH----------------HHHHHHHcCChHHHHHHHHHHHH
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKR----------------RVAIAKAQGNFPTAIEWLNKYLE 86 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~----------------l~~~~~~~~~~~~A~~~~~~~l~ 86 (227)
+...++..|..+...|++++|+..|++++..+|+++.+++. +|.++...|++++|+..|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999 99999999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhH
Q 027158 87 TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKA 166 (227)
Q Consensus 87 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~ 166 (227)
++|+++.++..+|.++...|++++|+.+|++++.++|+++.++..+|.+++..|+ .....+...|.+++...| ...+
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~a 159 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE-QEKKKLETDYKKLSSPTK--MQYA 159 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH-HHHHHHHHHHC---CCCH--HHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHhCCCc--hhHH
Confidence 9999999999999999999999999999999999999999999999999988774 114567788888765444 3345
Q ss_pred HHhHHHHHHHHHhhh
Q 027158 167 LFGICLCSSAIAQLT 181 (227)
Q Consensus 167 ~~~l~~~~~~~~~~~ 181 (227)
++..+.+....+++.
T Consensus 160 ~~~~g~~~~~~~~~~ 174 (208)
T 3urz_A 160 RYRDGLSKLFTTRYE 174 (208)
T ss_dssp HHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHccCHH
Confidence 666777777666543
No 55
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.87 E-value=1.9e-20 Score=143.82 Aligned_cols=155 Identities=11% Similarity=0.016 Sum_probs=140.5
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH--HHHHHcCChHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRV--AIAKAQGNFPTAIE 79 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~--~~~~~~~~~~~A~~ 79 (227)
..|++++|+..+++ |+++.++..+|.++...|++++|+..++++++.+|++.......+ .++...|++++|+.
T Consensus 113 ~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~ 187 (291)
T 3mkr_A 113 YDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYY 187 (291)
T ss_dssp HTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHH
T ss_pred HCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHH
Confidence 46899999999988 899999999999999999999999999999999999875444333 34445689999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHH-HHHHHHHHhhh
Q 027158 80 WLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILL-AKKYYASTIDL 158 (227)
Q Consensus 80 ~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~-A~~~~~~~~~~ 158 (227)
.|+++++.+|+++.++..+|.++...|++++|+..|++++..+|+++.++.++|.++...|+ ..+ +..++++++++
T Consensus 188 ~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~---~~eaa~~~~~~~~~~ 264 (291)
T 3mkr_A 188 IFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGK---PPEVTNRYLSQLKDA 264 (291)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999 876 57899999999
Q ss_pred cCCCchh
Q 027158 159 TGGKNTK 165 (227)
Q Consensus 159 ~~~~~~~ 165 (227)
+|+ ++.
T Consensus 265 ~P~-~~~ 270 (291)
T 3mkr_A 265 HRS-HPF 270 (291)
T ss_dssp CTT-CHH
T ss_pred CCC-ChH
Confidence 996 553
No 56
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.1e-21 Score=158.11 Aligned_cols=154 Identities=16% Similarity=0.075 Sum_probs=80.0
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..+++++...|+ +.++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..|+
T Consensus 250 ~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 328 (514)
T 2gw1_A 250 KNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFD 328 (514)
T ss_dssp SSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34555555555555555555 55555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
+++..+|.++.++..+|.++...|++++|+.++++++...|.++.++..+|.++...|+ +++|+..|+++++..|
T Consensus 329 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~a~~~~~ 403 (514)
T 2gw1_A 329 KAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKND---FDKALKQYDLAIELEN 403 (514)
T ss_dssp HHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHhhh
Confidence 55555555555555555555555555555555555555555555555555555555555 5555555555555444
No 57
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.87 E-value=9.9e-21 Score=156.10 Aligned_cols=174 Identities=13% Similarity=0.056 Sum_probs=149.9
Q ss_pred CChHHHHHHHHHHHHhCCCchh-------hHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHH
Q 027158 4 QCLDVAKDCIKVLQKQFPESKR-------VGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPT 76 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~-------~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~ 76 (227)
|++++|+..+++++...|+++. ++..+|.++...|++++|+..+++++..+|+ +.++..+|.++...|++++
T Consensus 216 ~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~ 294 (537)
T 3fp2_A 216 DLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQE 294 (537)
T ss_dssp HHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHH
T ss_pred HHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHH
Confidence 4688889999999998888754 4677788888889999999999999999988 8888899999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Q 027158 77 AIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTI 156 (227)
Q Consensus 77 A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~ 156 (227)
|+..|++++..+|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|+ +++|+..|++++
T Consensus 295 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~~~ 371 (537)
T 3fp2_A 295 FFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGK---FTESEAFFNETK 371 (537)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTC---HHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988999999999999999 999999999999
Q ss_pred hhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 157 DLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
+..|+ +...+..++.++...++..+
T Consensus 372 ~~~~~-~~~~~~~l~~~~~~~g~~~~ 396 (537)
T 3fp2_A 372 LKFPT-LPEVPTFFAEILTDRGDFDT 396 (537)
T ss_dssp HHCTT-CTHHHHHHHHHHHHTTCHHH
T ss_pred HhCCC-ChHHHHHHHHHHHHhCCHHH
Confidence 99885 77888888888877666443
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.87 E-value=2.5e-20 Score=132.48 Aligned_cols=153 Identities=16% Similarity=0.116 Sum_probs=146.1
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIY 102 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~ 102 (227)
....+..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..++++++.+|.++.++..+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTY 86 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 103 VSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 103 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
...|++++|+.++++++...|.++.++..+|.++...|+ +++|+..++++++..|+ +...+..++.++...++
T Consensus 87 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~ 159 (186)
T 3as5_A 87 VQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR---FDEAIDSFKIALGLRPN-EGKVHRAIAFSYEQMGR 159 (186)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCc---HHHHHHHHHHHHhcCcc-chHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999 99999999999999995 88899999988887665
No 59
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.87 E-value=1.5e-21 Score=139.07 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=97.5
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCChHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAK-AQGNFPTAIEWL 81 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~ 81 (227)
.|++++|+..|++++..+|+++.+++.+|.++...|++++|+..+++++..+| ++..+..++.+.. ..+...+|+..+
T Consensus 19 ~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~ 97 (176)
T 2r5s_A 19 QGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRL 97 (176)
T ss_dssp TTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHH
Confidence 46666677777776666666666666777777767777777777777666666 5555444443322 223334466666
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV--PLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
+++++.+|+++.+++.+|.++...|++++|+..|++++..+|+. +.++..+|.++...|+ .++|+..|++++.
T Consensus 98 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~---~~~A~~~y~~al~ 172 (176)
T 2r5s_A 98 EQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQ---GNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCS---SCHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCC---CCcHHHHHHHHHH
Confidence 77777777767777777777777777777777777777666654 4466666666666666 6666666666654
No 60
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.87 E-value=2.1e-21 Score=134.70 Aligned_cols=115 Identities=15% Similarity=0.003 Sum_probs=109.5
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC
Q 027158 12 CIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD 91 (227)
Q Consensus 12 ~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~ 91 (227)
.+++++..+|+++.+++.+|.++...|++++|+..|++++..+|+++.+|..+|.++...|++++|+..|++++.++|++
T Consensus 24 ~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 24 TLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp CTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred CHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 34556667888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCH
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP 126 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 126 (227)
+.+|+++|.++...|++++|+.+|++++.+.|+.+
T Consensus 104 ~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 104 YTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999865
No 61
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.86 E-value=4.5e-20 Score=142.76 Aligned_cols=171 Identities=15% Similarity=0.090 Sum_probs=153.6
Q ss_pred hHHHHHHHHHHHH-hCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCChHHHHHHHHH
Q 027158 6 LDVAKDCIKVLQK-QFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPV-LHKRRVAIAKAQGNFPTAIEWLNK 83 (227)
Q Consensus 6 ~~~A~~~~~~~~~-~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~-~~~~l~~~~~~~~~~~~A~~~~~~ 83 (227)
+++|...|++++. ..|++..+|..+|.++...|++++|...|+++++..|.++. +|..+|.++...|++++|+..|++
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3899999999999 69999999999999999999999999999999999999987 999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh---c
Q 027158 84 YLETFMADHDAWRELAEIYVS-LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL---T 159 (227)
Q Consensus 84 ~l~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~---~ 159 (227)
+++..|.+..+|...+.+... .|++++|+.+|++++..+|+++.+|..+|.++...|+ +++|+..|++++.. .
T Consensus 160 a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~---~~~A~~~~~~al~~~~l~ 236 (308)
T 2ond_A 160 AREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE---DNNTRVLFERVLTSGSLP 236 (308)
T ss_dssp HHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHSSSSC
T ss_pred HHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC---HHHHHHHHHHHHhccCCC
Confidence 999999998888877777544 7999999999999999999999999999999999999 99999999999996 4
Q ss_pred CCCchhHHHhHHHHHHHHHh
Q 027158 160 GGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 160 ~~~~~~~~~~l~~~~~~~~~ 179 (227)
|+.....+..++......++
T Consensus 237 p~~~~~l~~~~~~~~~~~g~ 256 (308)
T 2ond_A 237 PEKSGEIWARFLAFESNIGD 256 (308)
T ss_dssp GGGCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 43245566666666555553
No 62
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.86 E-value=2.7e-20 Score=143.98 Aligned_cols=171 Identities=11% Similarity=-0.002 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHH-------cCCH-------HHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHc
Q 027158 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEA-------KGLW-------AEAEKAYSSLLE-DNPLDPVLHKRRVAIAKAQ 71 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~-------~~~~-------~~A~~~~~~~l~-~~p~~~~~~~~l~~~~~~~ 71 (227)
++|+..|++++..+|.++.+|+.+|..+.. .|++ ++|+..|++++. .+|++..+|..+|.++...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 789999999999999999999999998874 5885 999999999999 6999999999999999999
Q ss_pred CChHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCCCcHHHHH
Q 027158 72 GNFPTAIEWLNKYLETFMADHD-AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT-LGGVDNILLAK 149 (227)
Q Consensus 72 ~~~~~A~~~~~~~l~~~p~~~~-~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~~~~A~ 149 (227)
|++++|+..|++++++.|.++. +|..+|.++...|++++|+..|+++++..|.+..++...+...+. .|+ +++|+
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~---~~~A~ 189 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD---KSVAF 189 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCC---HHHHH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC---HHHHH
Confidence 9999999999999999999987 999999999999999999999999999999998888777766543 699 99999
Q ss_pred HHHHHHhhhcCCCchhHHHhHHHHHHHHHhhh
Q 027158 150 KYYASTIDLTGGKNTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (227)
..|+++++..|+ ++..+..++......++..
T Consensus 190 ~~~~~al~~~p~-~~~~~~~~~~~~~~~g~~~ 220 (308)
T 2ond_A 190 KIFELGLKKYGD-IPEYVLAYIDYLSHLNEDN 220 (308)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHH
Confidence 999999999996 8888888887776655433
No 63
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.86 E-value=6.2e-21 Score=132.13 Aligned_cols=128 Identities=13% Similarity=-0.014 Sum_probs=108.5
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Q 027158 44 EKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQP 123 (227)
Q Consensus 44 ~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 123 (227)
-..|++++..+|++..+++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+.+|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34678888888988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHH
Q 027158 124 TVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSS 175 (227)
Q Consensus 124 ~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~ 175 (227)
+++.+++.+|.++...|+ +++|+..|++++++.|+ ++........+..
T Consensus 87 ~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~ 134 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGE---LAEAESGLFLAQELIAN-XPEFXELSTRVSS 134 (148)
T ss_dssp TCTHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHTT-CGGGHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHcCC---HHHHHHHHHHHHHHCcC-CCcchHHHHHHHH
Confidence 999999999999999999 99999999999998885 5544333333333
No 64
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.8e-20 Score=152.37 Aligned_cols=178 Identities=13% Similarity=0.062 Sum_probs=143.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+
T Consensus 282 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 361 (514)
T 2gw1_A 282 DRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLF 361 (514)
T ss_dssp TSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45777888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHH------HHHHHHHHHHH---cCCCCcHHHHHHHH
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPL------YHLAYADVLYT---LGGVDNILLAKKYY 152 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~la~~~~~---~g~~~~~~~A~~~~ 152 (227)
+++++.+|.++.++..+|.++...|++++|+.+|++++...|.++. ++..+|.++.. .|+ +++|+..|
T Consensus 362 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~A~~~~ 438 (514)
T 2gw1_A 362 SEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVEN---FIEATNLL 438 (514)
T ss_dssp HHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH---HHHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCC---HHHHHHHH
Confidence 8888888888888888888888888888888888888887777654 77888888888 787 88888888
Q ss_pred HHHhhhcCCCchhHHHhHHHHHHHHHhhhcC
Q 027158 153 ASTIDLTGGKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
+++++..|+ +..++..++.++...++..++
T Consensus 439 ~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A 468 (514)
T 2gw1_A 439 EKASKLDPR-SEQAKIGLAQMKLQQEDIDEA 468 (514)
T ss_dssp HHHHHHCTT-CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCcc-cHHHHHHHHHHHHHhcCHHHH
Confidence 888888885 777777888887777765543
No 65
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.86 E-value=1.2e-20 Score=144.70 Aligned_cols=163 Identities=8% Similarity=-0.078 Sum_probs=148.5
Q ss_pred HHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHH
Q 027158 16 LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAW 95 (227)
Q Consensus 16 ~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 95 (227)
+....|++...++.+|..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++..+|+....+
T Consensus 109 l~~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~ 188 (287)
T 3qou_A 109 LDXVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQG 188 (287)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHH
T ss_pred HHHHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHH
Confidence 33445888999999999999999999999999999999999999999999999999999999999999999999777777
Q ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCc--hhHHHhHHHH
Q 027158 96 RELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKN--TKALFGICLC 173 (227)
Q Consensus 96 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~l~~~ 173 (227)
...+..+...++.+.|+..+++++..+|+++.+++.+|.++...|+ +++|+..|.++++.+|+ + ..++..++.+
T Consensus 189 ~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~---~~~A~~~l~~~l~~~p~-~~~~~a~~~l~~~ 264 (287)
T 3qou_A 189 LVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGR---NEEALELLFGHLRXDLT-AADGQTRXTFQEI 264 (287)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-GGGGHHHHHHHHH
T ss_pred HHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHccc---HHHHHHHHHHHHhcccc-cccchHHHHHHHH
Confidence 7888888899999999999999999999999999999999999999 99999999999999996 5 7888999999
Q ss_pred HHHHHhhhc
Q 027158 174 SSAIAQLTK 182 (227)
Q Consensus 174 ~~~~~~~~~ 182 (227)
+..+++...
T Consensus 265 ~~~~g~~~~ 273 (287)
T 3qou_A 265 LAALGTGDA 273 (287)
T ss_dssp HHHHCTTCH
T ss_pred HHHcCCCCc
Confidence 988887543
No 66
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.85 E-value=4.9e-20 Score=141.54 Aligned_cols=156 Identities=13% Similarity=0.047 Sum_probs=136.7
Q ss_pred CCChHHHHHHHHHHHHhCCC------chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPE------SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD------PVLHKRRVAIAKA 70 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~l~~~~~~ 70 (227)
.|++++|+..|++++...+. ...++..+|.++...|++++|+.+|++++...|.. ..++..+|.++..
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 129 (292)
T 1qqe_A 50 RKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN 129 (292)
T ss_dssp TTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999987531 25688899999999999999999999999987643 4688999999999
Q ss_pred c-CChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHH-------HHHHHHHHH
Q 027158 71 Q-GNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPL-------YHLAYADVL 136 (227)
Q Consensus 71 ~-~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~~~~la~~~ 136 (227)
. |++++|+.+|++++++.|.+ ..++..+|.++...|++++|+.+|++++...|.+.. ++.++|.++
T Consensus 130 ~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 209 (292)
T 1qqe_A 130 DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQ 209 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 6 99999999999999998865 567899999999999999999999999999987643 678999999
Q ss_pred HHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 137 YTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 137 ~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
..+|+ +++|+.+|+++++++|+
T Consensus 210 ~~~g~---~~~A~~~~~~al~l~p~ 231 (292)
T 1qqe_A 210 LAATD---AVAAARTLQEGQSEDPN 231 (292)
T ss_dssp HHTTC---HHHHHHHHHGGGCC---
T ss_pred HHcCC---HHHHHHHHHHHHhhCCC
Confidence 99999 99999999999999996
No 67
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.85 E-value=3.2e-19 Score=120.07 Aligned_cols=134 Identities=22% Similarity=0.260 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVS 104 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~ 104 (227)
.+++.+|.++...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++...|.++..+..+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 105 LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 105 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.|++++|+.++++++...|.++.++..+|.++...|+ +++|...|.+++..+|+
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD---YDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHHSTT
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHcc---HHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999999999 99999999999999884
No 68
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.85 E-value=8.6e-21 Score=131.40 Aligned_cols=120 Identities=13% Similarity=-0.006 Sum_probs=114.7
Q ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcC
Q 027158 10 KDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFM 89 (227)
Q Consensus 10 ~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p 89 (227)
...|++++..+|++..+++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+..|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 35688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHH
Q 027158 90 ADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYH 129 (227)
Q Consensus 90 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 129 (227)
+++.+++.+|.++...|++++|+.+|++++..+|+++...
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 126 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFX 126 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGH
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcch
Confidence 9999999999999999999999999999999999877553
No 69
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.85 E-value=2.6e-21 Score=151.56 Aligned_cols=152 Identities=16% Similarity=0.151 Sum_probs=140.9
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHH
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD---------------PVLHKRRVAIA 68 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~ 68 (227)
+++++|+..++.++...|....++..+|.+++..|++++|+..|++++..+|.+ ..++.++|.++
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~ 206 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCH 206 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777788888899999999999999999999999999999999998 69999999999
Q ss_pred HHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHH
Q 027158 69 KAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLA 148 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A 148 (227)
...|++++|+..|+++++++|.++.+++.+|.++...|++++|+.+|++++.++|++..++..++.++..+|+ +++|
T Consensus 207 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~---~~~a 283 (336)
T 1p5q_A 207 LKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR---QLAR 283 (336)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH---HHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH---HHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 9888
Q ss_pred -HHHHHHHhhh
Q 027158 149 -KKYYASTIDL 158 (227)
Q Consensus 149 -~~~~~~~~~~ 158 (227)
...|.+++..
T Consensus 284 ~~~~~~~~~~~ 294 (336)
T 1p5q_A 284 EKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 5577777654
No 70
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.84 E-value=4.6e-20 Score=126.76 Aligned_cols=126 Identities=15% Similarity=0.008 Sum_probs=105.8
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Q 027158 45 KAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 45 ~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 124 (227)
..|++++..+|++...++.+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+.+|++++..+|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46778888889888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHH
Q 027158 125 VPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCS 174 (227)
Q Consensus 125 ~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (227)
++.+++.+|.++...|+ +++|+..|+++++++|+ ++........+.
T Consensus 85 ~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~p~-~~~~~~~~~~~~ 130 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGD---LDGAESGFYSARALAAA-QPAHEALAARAG 130 (142)
T ss_dssp CTHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHT-CGGGHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-CcchHHHHHHHH
Confidence 99999999999999999 99999999999999885 544433333333
No 71
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.84 E-value=1.8e-19 Score=133.24 Aligned_cols=156 Identities=10% Similarity=0.048 Sum_probs=139.2
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHH---HHH
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP---VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHD---AWR 96 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~---~~~ 96 (227)
++..++.+|..+...|++++|+..|++++...|.++ .+++.+|.++...|++++|+..|+++++.+|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 466788999999999999999999999999998874 78999999999999999999999999999999864 889
Q ss_pred HHHHHHHH------------------cccHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHHcCC
Q 027158 97 ELAEIYVS------------------LQMYKQAAFCYEELILSQPTVPLYH-----------------LAYADVLYTLGG 141 (227)
Q Consensus 97 ~la~~~~~------------------~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~la~~~~~~g~ 141 (227)
.+|.++.. .|++++|+..|++++...|+++.++ ..+|.++...|+
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~ 162 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGA 162 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999886 5799999999999999999987544 678999999999
Q ss_pred CCcHHHHHHHHHHHhhhcCCC--chhHHHhHHHHHHHHHhhh
Q 027158 142 VDNILLAKKYYASTIDLTGGK--NTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 142 ~~~~~~A~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~ 181 (227)
+.+|+..|+++++..|+. ...+++.++.++..+++..
T Consensus 163 ---~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 163 ---WVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp ---HHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred ---HHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 999999999999999962 2367889999999888633
No 72
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.84 E-value=3.1e-20 Score=132.15 Aligned_cols=156 Identities=13% Similarity=-0.004 Sum_probs=136.6
Q ss_pred CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHH
Q 027158 20 FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELA 99 (227)
Q Consensus 20 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la 99 (227)
+|.....++.+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|++++..+| ++..+..++
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~ 80 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIA 80 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHH
Confidence 3455667889999999999999999999999999999999999999999999999999999999999999 887776666
Q ss_pred HHHH-HcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC-CchhHHHhHHHHHHHH
Q 027158 100 EIYV-SLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-KNTKALFGICLCSSAI 177 (227)
Q Consensus 100 ~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~ 177 (227)
.+.. ..+....|+..+++++..+|+++.+++.+|.++...|+ +++|+..|+++++.+|+ .+..++..++.++..+
T Consensus 81 ~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~---~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~ 157 (176)
T 2r5s_A 81 KLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGR---DEEALELLWNILKVNLGAQDGEVKKTFMDILSAL 157 (176)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc---HHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHh
Confidence 5543 33445568999999999999999999999999999999 99999999999999996 2466888888888888
Q ss_pred Hh
Q 027158 178 AQ 179 (227)
Q Consensus 178 ~~ 179 (227)
++
T Consensus 158 g~ 159 (176)
T 2r5s_A 158 GQ 159 (176)
T ss_dssp CS
T ss_pred CC
Confidence 75
No 73
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.84 E-value=2.2e-19 Score=137.57 Aligned_cols=154 Identities=12% Similarity=-0.035 Sum_probs=146.4
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++..+|+........+..+...++.++|+..+
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l 208 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQL 208 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHH
Confidence 46899999999999999999999999999999999999999999999999999977777777777888999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV--PLYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
++++..+|+++.+++.+|.++...|++++|+..|++++..+|++ ..++..++.++...|+ .++|...|++++..
T Consensus 209 ~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~---~~~a~~~~r~al~~ 284 (287)
T 3qou_A 209 QQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT---GDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT---TCHHHHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC---CCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 8899999999999999 99999999998763
No 74
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.84 E-value=2.1e-20 Score=141.44 Aligned_cols=155 Identities=13% Similarity=0.118 Sum_probs=139.3
Q ss_pred CCCChHHHHHHHHHHHHh--------CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQ--------FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLED--------NPLDPVLHKRRV 65 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~ 65 (227)
..|++++|+.++++++.. .|....++..+|.++...|++++|+..+++++.. .|....++..+|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 467888888888888874 2556788999999999999999999999999987 356678899999
Q ss_pred HHHHHcCChHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhh--------CCCCHHHH
Q 027158 66 AIAKAQGNFPTAIEWLNKYLET--------FMADHDAWRELAEIYVSLQMYKQAAFCYEELILS--------QPTVPLYH 129 (227)
Q Consensus 66 ~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~ 129 (227)
.++...|++++|+.+|++++.. +|....++..+|.++...|++++|+.++++++.. .|....++
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999998 3666789999999999999999999999999998 66677899
Q ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 130 LAYADVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 130 ~~la~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
..+|.++...|+ +++|+..|+++++..
T Consensus 173 ~~la~~~~~~g~---~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 173 NNLASCYLKQGK---YQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHTC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---HHHHHHHHHHHHHHH
Confidence 999999999999 999999999999874
No 75
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.83 E-value=2.1e-20 Score=128.43 Aligned_cols=128 Identities=13% Similarity=0.009 Sum_probs=115.7
Q ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCC
Q 027158 11 DCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA 90 (227)
Q Consensus 11 ~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~ 90 (227)
..|++++..+|++...++.+|.++...|++++|+..|++++..+|+++.+|..+|.++...|++++|+..|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46777888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 027158 91 DHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT 138 (227)
Q Consensus 91 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 138 (227)
++.+++.+|.++...|++++|+.+|++++..+|+++........+...
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 132 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAM 132 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999887665555444443
No 76
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=3.9e-19 Score=119.38 Aligned_cols=113 Identities=23% Similarity=0.207 Sum_probs=62.7
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYV 103 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~ 103 (227)
...+..+|..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|+++++++|+++.+|+.+|.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HcccHHHHHHHHHHHHhhC------CCCHHHHHHHHHHH
Q 027158 104 SLQMYKQAAFCYEELILSQ------PTVPLYHLAYADVL 136 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~ 136 (227)
..|++++|+..|++++.++ |.+..++..++.+.
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 5555555555555555555 55555555544443
No 77
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.83 E-value=1.7e-19 Score=128.22 Aligned_cols=124 Identities=10% Similarity=0.059 Sum_probs=96.3
Q ss_pred HHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHcccH--HHH
Q 027158 35 EAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEI-YVSLQMY--KQA 111 (227)
Q Consensus 35 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~-~~~~~~~--~~A 111 (227)
...|++++|+..+++++..+|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.+ +...|++ ++|
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A 100 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQT 100 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHH
Confidence 4567777888888888888888888888888888888888888888888888888888888888888 6777887 888
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 112 AFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 112 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+.+|++++..+|+++.++..+|.++...|+ +++|+..|+++++..|+
T Consensus 101 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 101 RAMIDKALALDSNEITALMLLASDAFMQAN---YAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHccc---HHHHHHHHHHHHhhCCC
Confidence 888888888888888888888888888888 88888888888888775
No 78
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.83 E-value=8.6e-20 Score=155.31 Aligned_cols=157 Identities=17% Similarity=0.059 Sum_probs=147.6
Q ss_pred hCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHH--------hcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCC
Q 027158 19 QFPESKRVGRLEGILLEAKGLWAEAEKAYSSLL--------EDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA 90 (227)
Q Consensus 19 ~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l--------~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~ 90 (227)
.+|+++.+.+..+ ...|++++|+..+++++ ..+|++..++..+|.++...|++++|+..|+++++.+|+
T Consensus 389 ~~p~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 465 (681)
T 2pzi_A 389 VDPTDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW 465 (681)
T ss_dssp CCTTSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCcchHHhhc---ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc
Confidence 4677888877776 78899999999999999 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhH
Q 027158 91 DHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGI 170 (227)
Q Consensus 91 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l 170 (227)
++.+|+.+|.++...|++++|+..|+++++.+|+++.++.++|.++...|+ +++ +..|+++++++|+ +..+++++
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~---~~~-~~~~~~al~~~P~-~~~a~~~l 540 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGN---TDE-HKFYQTVWSTNDG-VISAAFGL 540 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC---CCT-TCHHHHHHHHCTT-CHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCC---hHH-HHHHHHHHHhCCc-hHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 999 9999999999996 99999999
Q ss_pred HHHHHHHHhhhcC
Q 027158 171 CLCSSAIAQLTKG 183 (227)
Q Consensus 171 ~~~~~~~~~~~~~ 183 (227)
+.++..+++...+
T Consensus 541 g~~~~~~g~~~~A 553 (681)
T 2pzi_A 541 ARARSAEGDRVGA 553 (681)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHH
Confidence 9999998876654
No 79
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.83 E-value=5.9e-19 Score=143.54 Aligned_cols=180 Identities=12% Similarity=-0.035 Sum_probs=149.1
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHH---cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCChH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEA---KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA----QGNFP 75 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~---~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~----~~~~~ 75 (227)
.+++++|+.+|++++..+|+++.++..++.++.. .++.++|+..++++++.+|+++.++..+|..+.. .|+++
T Consensus 151 ~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~ 230 (472)
T 4g1t_A 151 GNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEG 230 (472)
T ss_dssp TTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------C
T ss_pred cccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHH
Confidence 4579999999999999999999999988887654 4777889999999999999999998888876655 46788
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--------------
Q 027158 76 TAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG-------------- 141 (227)
Q Consensus 76 ~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-------------- 141 (227)
+|+.++++++..+|.++.++..+|.+|...|++++|+..|++++..+|+++.++..+|.+|...+.
T Consensus 231 ~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~ 310 (472)
T 4g1t_A 231 EGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKR 310 (472)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHH
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988764321
Q ss_pred --CCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcC
Q 027158 142 --VDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 142 --~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
...++.|+..|+++++++|. ....+..++.++...+++.++
T Consensus 311 ~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~lg~~~~~~~~~~~A 353 (472)
T 4g1t_A 311 KLLELIGHAVAHLKKADEANDN-LFRVCSILASLHALADQYEEA 353 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-TCCCHHHHHHHHHHTTCHHHH
T ss_pred HHHhhHHHHHHHHHHHhhcCCc-hhhhhhhHHHHHHHhccHHHH
Confidence 01267888888888888885 777888888888887765543
No 80
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.82 E-value=1.6e-19 Score=138.61 Aligned_cols=156 Identities=13% Similarity=0.159 Sum_probs=141.2
Q ss_pred CCCChHHHHHHHHHHHHh--------CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQ--------FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLED--------NPLDPVLHKRRV 65 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~ 65 (227)
..|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++.. .|....++..+|
T Consensus 39 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 118 (311)
T 3nf1_A 39 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLA 118 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 368999999999999995 5667788999999999999999999999999987 355678899999
Q ss_pred HHHHHcCChHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhh--------CCCCHHHH
Q 027158 66 AIAKAQGNFPTAIEWLNKYLETF--------MADHDAWRELAEIYVSLQMYKQAAFCYEELILS--------QPTVPLYH 129 (227)
Q Consensus 66 ~~~~~~~~~~~A~~~~~~~l~~~--------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~ 129 (227)
.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.++++++.. .|....++
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 198 (311)
T 3nf1_A 119 VLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK 198 (311)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999999999999999985 555778999999999999999999999999988 66667889
Q ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 130 LAYADVLYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 130 ~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
..+|.++...|+ +++|+..|+++++..|
T Consensus 199 ~~la~~~~~~g~---~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 199 NNLASCYLKQGK---FKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHHHHHHHTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---HHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999998643
No 81
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.82 E-value=7.1e-18 Score=137.16 Aligned_cols=174 Identities=14% Similarity=-0.001 Sum_probs=150.9
Q ss_pred CCCChHHHHHHHHHHHHhC--------CCchhhHHHHHHHHHHc--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH--
Q 027158 2 DCQCLDVAKDCIKVLQKQF--------PESKRVGRLEGILLEAK--GLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAK-- 69 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~--------p~~~~~~~~~a~~~~~~--~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-- 69 (227)
.+|++++|+..+++++... +..+.++..+|.++... +++++|+.+|++++..+|+++.++..++.++.
T Consensus 106 ~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 106 HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 3689999999999998863 24567788888777654 57999999999999999999999999998755
Q ss_pred -HcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCc
Q 027158 70 -AQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVS----LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDN 144 (227)
Q Consensus 70 -~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~ 144 (227)
..++.++|+..++++++++|.++.++..+|..+.. .|++++|+.++++++..+|.++.++..+|.++...|+
T Consensus 186 ~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~--- 262 (472)
T 4g1t_A 186 DNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDE--- 262 (472)
T ss_dssp HHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC---
T ss_pred cCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCc---
Confidence 45788999999999999999999999999877665 4678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 145 ILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 145 ~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+++|+..|.++++..|+ +..+++.++.++.....
T Consensus 263 ~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~ 296 (472)
T 4g1t_A 263 PDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVF 296 (472)
T ss_dssp HHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHH
Confidence 99999999999999996 88999999998876544
No 82
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.82 E-value=7.4e-18 Score=127.78 Aligned_cols=160 Identities=13% Similarity=0.013 Sum_probs=141.1
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCh
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEA----KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA----QGNF 74 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~----~~~~ 74 (227)
.|++++|+..|++++. |+++.+++.+|.++.. .+++++|+.+|+++++.+ ++.++..+|.++.. .+++
T Consensus 19 ~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~ 94 (273)
T 1ouv_A 19 EKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNT 94 (273)
T ss_dssp TTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCH
Confidence 5789999999999988 7788899999999999 999999999999999875 78999999999999 9999
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCCCcHH
Q 027158 75 PTAIEWLNKYLETFMADHDAWRELAEIYVS----LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT----LGGVDNIL 146 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~~~ 146 (227)
++|+.+|+++++. .++.++..+|.+|.. .+++++|+.+|++++..+ ++.++..+|.++.. .++ ++
T Consensus 95 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~---~~ 167 (273)
T 1ouv_A 95 NKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKD---LK 167 (273)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCC---HH
T ss_pred HHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCC---HH
Confidence 9999999999886 488999999999999 999999999999999875 67888999999988 888 99
Q ss_pred HHHHHHHHHhhhcCCCchhHHHhHHHHHHH
Q 027158 147 LAKKYYASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
+|+.+|+++++.. ++.+++.++.++..
T Consensus 168 ~A~~~~~~a~~~~---~~~a~~~lg~~~~~ 194 (273)
T 1ouv_A 168 KALASYDKACDLK---DSPGCFNAGNMYHH 194 (273)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC---CHHHHHHHHHHHHc
Confidence 9999999999874 45677777777766
No 83
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.82 E-value=3.6e-18 Score=124.63 Aligned_cols=131 Identities=15% Similarity=0.058 Sum_probs=124.0
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVS 104 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~ 104 (227)
..++.+|.++...|++++|+..|++++ +| ++.++..+|.++...|++++|+..|++++..+|.++.+++.+|.++..
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 356788999999999999999999996 33 789999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHhhCCCCH----------------HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 105 LQMYKQAAFCYEELILSQPTVP----------------LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 105 ~~~~~~A~~~~~~al~~~p~~~----------------~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.|++++|+.+|++++...|.+. .++..+|.++...|+ +++|+..|++++++.|+
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEE---WKKAEEQLALATSMKSE 153 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTCCS
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCcc
Confidence 9999999999999999888776 899999999999999 99999999999999996
No 84
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.82 E-value=6.7e-21 Score=149.20 Aligned_cols=171 Identities=13% Similarity=0.090 Sum_probs=149.3
Q ss_pred ChHHHHHHHHH----HHHhCCCchhhHHHHHHHHH------------HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 027158 5 CLDVAKDCIKV----LQKQFPESKRVGRLEGILLE------------AKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIA 68 (227)
Q Consensus 5 ~~~~A~~~~~~----~~~~~p~~~~~~~~~a~~~~------------~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~ 68 (227)
.+++|+..++. .+...|.. ++...|.... ..+++++|+..+++++..+|.++.++..+|.++
T Consensus 80 ~~e~al~~~~~Ge~~~l~i~p~~--ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~ 157 (336)
T 1p5q_A 80 GLERAIQRMEKGEHSIVYLKPSY--AFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVY 157 (336)
T ss_dssp HHHHHHTTCCTTCEEEEEECTTT--TTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEEEEECCcc--ccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHH
Confidence 45666666666 55566654 3333333322 456778888899999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHHcCCC---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 027158 69 KAQGNFPTAIEWLNKYLETFMAD---------------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYA 133 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 133 (227)
...|++++|+..|++++.++|.+ ..+|.++|.++...|++++|+.+|++++.++|+++.+++.+|
T Consensus 158 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 237 (336)
T 1p5q_A 158 FKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRG 237 (336)
T ss_dssp HHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 99999999999999999999999 699999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhh
Q 027158 134 DVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (227)
.++..+|+ +++|+..|+++++++|+ +..++..++.++..+++..
T Consensus 238 ~~~~~~g~---~~~A~~~~~~al~l~P~-~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 238 EAHLAVND---FELARADFQKVLQLYPN-NKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp HHHHHTTC---HHHHHHHHHHHHHHCSS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC---HHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999996 8899999999999988754
No 85
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.1e-18 Score=117.23 Aligned_cols=118 Identities=9% Similarity=0.016 Sum_probs=108.5
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 027158 55 PLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYAD 134 (227)
Q Consensus 55 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 134 (227)
|..+..+..+|..+...|++++|+..|+++++.+|.++.+|..+|.++...|++++|+..|++++.++|+++.+++.+|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcHHHHHHHHHHHhhhc------CCCchhHHHhHHHHHHH
Q 027158 135 VLYTLGGVDNILLAKKYYASTIDLT------GGKNTKALFGICLCSSA 176 (227)
Q Consensus 135 ~~~~~g~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~l~~~~~~ 176 (227)
++..+|+ +++|+..|+++++++ |. +...+..+..+...
T Consensus 81 ~~~~~~~---~~~A~~~~~~al~~~p~~~~~p~-~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 81 AQIAVKE---YASALETLDAARTKDAEVNNGSS-AREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHTTC---HHHHHHHHHHHHHHHHHHHTTTT-HHHHHHHHHHHHHH
T ss_pred HHHHHhC---HHHHHHHHHHHHHhCcccCCchh-HHHHHHHHHHHHHh
Confidence 9999999 999999999999999 74 66666666655543
No 86
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.81 E-value=1.4e-18 Score=123.50 Aligned_cols=128 Identities=13% Similarity=0.005 Sum_probs=118.9
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHcCCh--HHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAI-AKAQGNF--PTAI 78 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~-~~~~~~~--~~A~ 78 (227)
+.|++++|+..+++++..+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.+ +...|++ ++|+
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~ 101 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTR 101 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHH
T ss_pred hccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHH
Confidence 568899999999999999999999999999999999999999999999999999999999999999 8899998 9999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHH
Q 027158 79 EWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYH 129 (227)
Q Consensus 79 ~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 129 (227)
..|++++..+|.++.++..+|.++...|++++|+.+|++++..+|+++...
T Consensus 102 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 102 AMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 999999999999999999999999999999999999999999999886543
No 87
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.81 E-value=3.3e-18 Score=119.71 Aligned_cols=135 Identities=13% Similarity=0.050 Sum_probs=124.9
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIY 102 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~ 102 (227)
.+..+..+|.++...|++++|+..|.+++..+|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHH--HHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 103 VSLQMYKQAAFCYEELILSQPTVPLYHLAYADV--LYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 103 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~--~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
...|++++|+.+|++++..+|.++.++..++.+ +...|+ +++|+..+.++....+
T Consensus 92 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKA---FERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH---HHHHHHcccchHHHhc
Confidence 999999999999999999999999888555544 888899 9999999998876643
No 88
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.81 E-value=1.3e-17 Score=128.26 Aligned_cols=174 Identities=9% Similarity=-0.028 Sum_probs=160.8
Q ss_pred ChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH----HHc---CChH
Q 027158 5 CLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKG--LWAEAEKAYSSLLEDNPLDPVLHKRRVAIA----KAQ---GNFP 75 (227)
Q Consensus 5 ~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~--~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~----~~~---~~~~ 75 (227)
..++|+.++.+++..+|++..+|..++.++...| ++++++.++..++..+|.+..+|+.++.++ ... ++++
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~ 127 (306)
T 3dra_A 48 YSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPY 127 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTH
T ss_pred CCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHH
Confidence 3468999999999999999999999999999999 999999999999999999999999999999 666 7899
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHH--HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC---CCcHHHHHH
Q 027158 76 TAIEWLNKYLETFMADHDAWRELAEIYVSLQMYK--QAAFCYEELILSQPTVPLYHLAYADVLYTLGG---VDNILLAKK 150 (227)
Q Consensus 76 ~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~--~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~---~~~~~~A~~ 150 (227)
+++.++.++++.+|.+..+|...+.+....|.++ +++.++++++..+|.|..+|...+.++...|. ...+++++.
T Consensus 128 ~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~ 207 (306)
T 3dra_A 128 REFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELN 207 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHH
Confidence 9999999999999999999999999999999998 99999999999999999999999999988764 112789999
Q ss_pred HHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 151 YYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
++.+++..+|. +..+|+.+..+...++.
T Consensus 208 ~~~~aI~~~p~-n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 208 YVKDKIVKCPQ-NPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHCSS-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCC-CccHHHHHHHHHHhcCC
Confidence 99999999996 88899888887777654
No 89
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.81 E-value=7.1e-19 Score=140.55 Aligned_cols=178 Identities=12% Similarity=0.019 Sum_probs=152.8
Q ss_pred CCCChHHHHHHHHHHHHhCCCch----hhHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHc
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK----RVGRLEGILLEAKGLWAEAEKAYSSLLED------NPLDPVLHKRRVAIAKAQ 71 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~l~~------~p~~~~~~~~l~~~~~~~ 71 (227)
..|++++|+..|++++...|+++ .++..+|.++...|++++|+..+++++.. .|....++..+|.++...
T Consensus 60 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 139 (411)
T 4a1s_A 60 NAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVM 139 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHC
Confidence 46899999999999999999876 57889999999999999999999999987 566778999999999999
Q ss_pred CChHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHccc-----------------HHHHHHHHHHHHhhC------
Q 027158 72 GNFPTAIEWLNKYLET------FMADHDAWRELAEIYVSLQM-----------------YKQAAFCYEELILSQ------ 122 (227)
Q Consensus 72 ~~~~~A~~~~~~~l~~------~p~~~~~~~~la~~~~~~~~-----------------~~~A~~~~~~al~~~------ 122 (227)
|++++|+.++++++.. .|....++..+|.++...|+ +++|+.++++++.+.
T Consensus 140 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~ 219 (411)
T 4a1s_A 140 GRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDR 219 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred CCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999998 55667799999999999999 999999999998764
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC-Cc----hhHHHhHHHHHHHHHhhhc
Q 027158 123 PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-KN----TKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 123 p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~~~~~~ 182 (227)
|....++..+|.++...|+ +++|+.+|++++++.+. .+ ...+..++.++...++...
T Consensus 220 ~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 281 (411)
T 4a1s_A 220 GAQGRACGNLGNTYYLLGD---FQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFED 281 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHH
Confidence 2334589999999999999 99999999999998774 11 2266677777766665443
No 90
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.81 E-value=5e-18 Score=119.24 Aligned_cols=124 Identities=16% Similarity=0.078 Sum_probs=104.5
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 027158 54 NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYA 133 (227)
Q Consensus 54 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 133 (227)
.+.++..+..+|.++...|++++|+..|+++++++|.++.+|..+|.++...|++++|+.+|++++.++|+++.+++.+|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44556788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhhhcCCCchh--HHHhHHHHHHHHHhhh
Q 027158 134 DVLYTLGGVDNILLAKKYYASTIDLTGGKNTK--ALFGICLCSSAIAQLT 181 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~ 181 (227)
.++..+|+ +++|+..|+++++++|+ +.. ...++..+..++.+..
T Consensus 87 ~~~~~~g~---~~~A~~~~~~al~~~p~-~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 87 LARFDMAD---YKGAKEAYEKGIEAEGN-GGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HHHHHTTC---HHHHHHHHHHHHHHHSS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccC---HHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999886 544 4556666666666644
No 91
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=1.7e-18 Score=116.66 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=91.4
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAE 100 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~ 100 (227)
|.+...+..+|.++...|++++|+..|++++..+|.+..++..+|.++...|++++|+.++++++..+|.++.++..+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45566777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 101 IYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 101 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
++...|++++|+.+|++++..+|.+..++..++.++...|+
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 77777777777777777777777777777777777766653
No 92
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.81 E-value=1.3e-18 Score=133.65 Aligned_cols=151 Identities=17% Similarity=0.118 Sum_probs=129.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC------HHHHH
Q 027158 29 LEGILLEAKGLWAEAEKAYSSLLEDNPL------DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD------HDAWR 96 (227)
Q Consensus 29 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~------~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~ 96 (227)
..|.++...|++++|+..|.+++...+. ...++..+|.++...|++++|+.+|++++++.|.. ..++.
T Consensus 42 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~ 121 (292)
T 1qqe_A 42 QAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKF 121 (292)
T ss_dssp HHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3477888999999999999999998432 25789999999999999999999999999998754 56899
Q ss_pred HHHHHHHHc-ccHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCch-----
Q 027158 97 ELAEIYVSL-QMYKQAAFCYEELILSQPTV------PLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNT----- 164 (227)
Q Consensus 97 ~la~~~~~~-~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~----- 164 (227)
++|.+|... |++++|+.+|++++.+.|.+ ..++.++|.++..+|+ +++|+.+|++++++.|+...
T Consensus 122 ~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~ 198 (292)
T 1qqe_A 122 ELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQ---YIEASDIYSKLIKSSMGNRLSQWSL 198 (292)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTTSSCTTTGGGH
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHhcCCcccHHH
Confidence 999999996 99999999999999998754 4678999999999999 99999999999999986221
Q ss_pred -hHHHhHHHHHHHHHhhhc
Q 027158 165 -KALFGICLCSSAIAQLTK 182 (227)
Q Consensus 165 -~~~~~l~~~~~~~~~~~~ 182 (227)
..+.+++.|+..+++...
T Consensus 199 ~~~~~~lg~~~~~~g~~~~ 217 (292)
T 1qqe_A 199 KDYFLKKGLCQLAATDAVA 217 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHH
Confidence 156788888888776544
No 93
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.80 E-value=1.4e-19 Score=131.17 Aligned_cols=120 Identities=16% Similarity=0.037 Sum_probs=70.0
Q ss_pred CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHcCChHHHHHHHHHHH
Q 027158 22 ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP----------------VLHKRRVAIAKAQGNFPTAIEWLNKYL 85 (227)
Q Consensus 22 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~----------------~~~~~l~~~~~~~~~~~~A~~~~~~~l 85 (227)
.....+..+|..+...|++++|+..|.+++...|.++ .++..+|.++...|++++|+.++++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 115 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVL 115 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3344455556666666666666666666666555554 555555555555555555555555555
Q ss_pred HHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 86 ETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 86 ~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
..+|.++.+++.+|.++...|++++|+.+|++++.++|+++.++..++.++...|+
T Consensus 116 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 116 KIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555555555
No 94
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.80 E-value=8.5e-19 Score=132.58 Aligned_cols=155 Identities=17% Similarity=0.125 Sum_probs=138.9
Q ss_pred CCCChHHHHHHHHHHHHhC--------CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQF--------PESKRVGRLEGILLEAKGLWAEAEKAYSSLLED--------NPLDPVLHKRRV 65 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~--------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~ 65 (227)
..|++++|+..+++++... |....++..+|.++...|++++|+..+.+++.. +|....++..+|
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 134 (283)
T 3edt_B 55 DQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLA 134 (283)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 3689999999999999873 556778999999999999999999999999998 466678999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC---------------
Q 027158 66 AIAKAQGNFPTAIEWLNKYLET--------FMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ--------------- 122 (227)
Q Consensus 66 ~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------------- 122 (227)
.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++...
T Consensus 135 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~ 214 (283)
T 3edt_B 135 LLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPI 214 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHH
Confidence 9999999999999999999998 66678899999999999999999999999999762
Q ss_pred ----------------------------------CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 123 ----------------------------------PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 123 ----------------------------------p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
|....++..+|.++...|+ +++|...|+++++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 215 WMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGK---LEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhh
Confidence 3445678999999999999 999999999998753
No 95
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.80 E-value=3.4e-18 Score=114.55 Aligned_cols=122 Identities=18% Similarity=0.120 Sum_probs=106.2
Q ss_pred CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHH
Q 027158 20 FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELA 99 (227)
Q Consensus 20 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la 99 (227)
.|.++..+..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.++..+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 34566778888888888889999999998888888888888888888888888888999899888888888888888888
Q ss_pred HHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 100 EIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 100 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
.++...|++++|+.+|++++..+|+++.++..++.++...|+
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 888888889889888888888888888888888888888876
No 96
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.80 E-value=2e-18 Score=121.22 Aligned_cols=116 Identities=20% Similarity=0.132 Sum_probs=109.1
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAE 100 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~ 100 (227)
+.+...++.+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++.++|.++.+|+.+|.
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 027158 101 IYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVL 136 (227)
Q Consensus 101 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 136 (227)
++...|++++|+.+|++++.++|+++.++...+...
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 999999999999999999999999988766665443
No 97
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.80 E-value=4.6e-18 Score=128.39 Aligned_cols=177 Identities=16% Similarity=0.036 Sum_probs=152.8
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+..|
T Consensus 55 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 134 (275)
T 1xnf_A 55 SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDL 134 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC------------------------------------
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV------------------------------------ 125 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------------------------------------ 125 (227)
+++++.+|.++.....++.. ...|++++|+..+++++...|.+
T Consensus 135 ~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 213 (275)
T 1xnf_A 135 LAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEH 213 (275)
T ss_dssp HHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhccccccccc
Confidence 99999999998766666544 66699999999998888766643
Q ss_pred -HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcCCCc
Q 027158 126 -PLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNK 186 (227)
Q Consensus 126 -~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 186 (227)
+.++..+|.++...|+ +++|+..|+++++.+|+ +...+ ..+...++++..+...
T Consensus 214 ~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~p~-~~~~~---~~~~~~l~~~~~a~~~ 268 (275)
T 1xnf_A 214 LSETNFYLGKYYLSLGD---LDSATALFKLAVANNVH-NFVEH---RYALLELSLLGQDQDD 268 (275)
T ss_dssp HHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTCCT-TCHHH---HHHHHHHHHHHHC---
T ss_pred ccHHHHHHHHHHHHcCC---HHHHHHHHHHHHhCCch-hHHHH---HHHHHHHHHHHhhHHH
Confidence 5678999999999999 99999999999999995 54444 3345556666555443
No 98
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.80 E-value=1.3e-18 Score=138.35 Aligned_cols=156 Identities=13% Similarity=0.019 Sum_probs=139.1
Q ss_pred CCCChHHHHHHHHHHHHh---CCC---chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQ---FPE---SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD-------PVLHKRRVAIA 68 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~---~p~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~-------~~~~~~l~~~~ 68 (227)
..|++++|+..+++++.. .|+ ...++..+|.++...|++++|+.++.++++..+.. ..++..+|.++
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 194 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNF 194 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHH
Confidence 368999999999999987 233 45789999999999999999999999999984433 46889999999
Q ss_pred HHcCChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHh-----hC-CCCHHHHHHHHHHH
Q 027158 69 KAQGNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQMYKQAAFCYEELIL-----SQ-PTVPLYHLAYADVL 136 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~-----~~-p~~~~~~~~la~~~ 136 (227)
...|++++|+.+|++++++.|.. ..++.++|.+|...|++++|+.+|++++. .+ |..+.++..+|.++
T Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 274 (383)
T 3ulq_A 195 LDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIH 274 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 99999999999999999986644 35899999999999999999999999998 46 77788999999999
Q ss_pred HHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 137 YTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 137 ~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
...|+ +++|..++++++++.+
T Consensus 275 ~~~g~---~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 275 YKLGK---IDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHTTC---HHHHHHHHHHHHHHHH
T ss_pred HHCCC---HHHHHHHHHHHHHHHH
Confidence 99999 9999999999999864
No 99
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.80 E-value=8.2e-18 Score=127.51 Aligned_cols=160 Identities=15% Similarity=0.044 Sum_probs=146.1
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCh
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEA----KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA----QGNF 74 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~----~~~~ 74 (227)
.+++++|+..|++++... ++.++..+|.++.. .+++++|+.+|+++++.+ ++.++..+|.++.. .+++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~ 130 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDF 130 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCH
Confidence 689999999999999875 78999999999999 999999999999999874 89999999999999 9999
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCCCcHH
Q 027158 75 PTAIEWLNKYLETFMADHDAWRELAEIYVS----LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT----LGGVDNIL 146 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~~~ 146 (227)
++|+.+|+++++.+ ++.++..+|.++.. .+++++|+.+|++++.. .++.++..+|.++.. .++ ++
T Consensus 131 ~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~---~~ 203 (273)
T 1ouv_A 131 KKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKN---FK 203 (273)
T ss_dssp HHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCC---HH
T ss_pred HHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCcc---HH
Confidence 99999999999875 78999999999999 99999999999999987 468899999999999 899 99
Q ss_pred HHHHHHHHHhhhcCCCchhHHHhHHHHHHH
Q 027158 147 LAKKYYASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
+|+.+|+++++..| ..+++.++.++..
T Consensus 204 ~A~~~~~~a~~~~~---~~a~~~l~~~~~~ 230 (273)
T 1ouv_A 204 EALARYSKACELEN---GGGCFNLGAMQYN 230 (273)
T ss_dssp HHHHHHHHHHHTTC---HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCC---HHHHHHHHHHHHc
Confidence 99999999999865 4566777777664
No 100
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.79 E-value=2.9e-18 Score=136.32 Aligned_cols=178 Identities=13% Similarity=-0.005 Sum_probs=150.6
Q ss_pred CCCChHHHHHHHHHHHHhCCCch----hhHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHc
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK----RVGRLEGILLEAKGLWAEAEKAYSSLLED------NPLDPVLHKRRVAIAKAQ 71 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~l~~------~p~~~~~~~~l~~~~~~~ 71 (227)
..|++++|+..|++++...|.++ .++..+|.++...|++++|+.++++++.. .|....++..+|.++...
T Consensus 21 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 100 (406)
T 3sf4_A 21 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVL 100 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHc
Confidence 46899999999999999999874 57889999999999999999999999887 344567899999999999
Q ss_pred CChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHccc--------------------HHHHHHHHHHHHhh----
Q 027158 72 GNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQM--------------------YKQAAFCYEELILS---- 121 (227)
Q Consensus 72 ~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~--------------------~~~A~~~~~~al~~---- 121 (227)
|++++|+.++++++.+.|.. +.++..+|.++...|+ +++|+.++++++.+
T Consensus 101 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~ 180 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL 180 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987654 5589999999999999 99999999999876
Q ss_pred --CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC-C----chhHHHhHHHHHHHHHhhhc
Q 027158 122 --QPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-K----NTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 122 --~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-~----~~~~~~~l~~~~~~~~~~~~ 182 (227)
.|....++..+|.++...|+ +++|+..|++++++.|. . ....+..++.++...++..+
T Consensus 181 ~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 245 (406)
T 3sf4_A 181 GDRAAQGRAFGNLGNTHYLLGN---FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFET 245 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTB---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCcHHHHHHHHHHHHHHHHccC---HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHH
Confidence 23345688999999999999 99999999999988664 1 12366777777777666543
No 101
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.79 E-value=1.3e-18 Score=133.50 Aligned_cols=157 Identities=18% Similarity=0.148 Sum_probs=140.6
Q ss_pred CCCChHHHHHHHHHHHHhC--------CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCCHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQF--------PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDN--------PLDPVLHKRRV 65 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~--------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--------p~~~~~~~~l~ 65 (227)
..|++++|+..+++++... |....++..+|.++...|++++|+.++++++... |....++..+|
T Consensus 81 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 160 (311)
T 3nf1_A 81 DQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLA 160 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 3689999999999999873 5567789999999999999999999999999874 55668899999
Q ss_pred HHHHHcCChHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhh----------------
Q 027158 66 AIAKAQGNFPTAIEWLNKYLET--------FMADHDAWRELAEIYVSLQMYKQAAFCYEELILS---------------- 121 (227)
Q Consensus 66 ~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~---------------- 121 (227)
.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 161 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 240 (311)
T 3nf1_A 161 LLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPI 240 (311)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHH
Confidence 9999999999999999999998 6666789999999999999999999999999974
Q ss_pred ---------------------------------CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 122 ---------------------------------QPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 122 ---------------------------------~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.|....++..+|.++...|+ +++|..+|++++++.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 241 WMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGK---FEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHhhc
Confidence 35566789999999999999 99999999999998873
No 102
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.79 E-value=3.1e-18 Score=142.87 Aligned_cols=137 Identities=13% Similarity=0.017 Sum_probs=115.4
Q ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHH
Q 027158 37 KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYE 116 (227)
Q Consensus 37 ~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~ 116 (227)
.|++++|+..|+++++.+|++..++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+.+|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHH
Q 027158 117 ELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAI 177 (227)
Q Consensus 117 ~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (227)
+++..+|+++.++..+|.++...|+ +++|+..|+++++.+|+ +..++..++.++..+
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQ---AEAAAAAYTRAHQLLPE-EPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 99999999999999996 888999999999887
No 103
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.79 E-value=8.7e-19 Score=126.91 Aligned_cols=154 Identities=14% Similarity=0.014 Sum_probs=128.1
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCH------------
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH------------ 92 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~------------ 92 (227)
......+.+....|+++.|.+.+.......+.....+..+|.++...|++++|+..|++++...|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 84 (198)
T 2fbn_A 5 HHHHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84 (198)
T ss_dssp -----------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHH
T ss_pred ccccchhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 33444566667778888888888777777777788999999999999999999999999999999987
Q ss_pred ----HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHH
Q 027158 93 ----DAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALF 168 (227)
Q Consensus 93 ----~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 168 (227)
.++.++|.++...|++++|+.++++++..+|.++.+++.+|.++..+|+ +++|+..|+++++++|+ +..++.
T Consensus 85 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~---~~~A~~~~~~al~~~p~-~~~~~~ 160 (198)
T 2fbn_A 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGF---LEEAKENLYKAASLNPN-NLDIRN 160 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHSTT-CHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccc---HHHHHHHHHHHHHHCCC-cHHHHH
Confidence 8999999999999999999999999999999999999999999999999 99999999999999996 888999
Q ss_pred hHHHHHHHHHhhhc
Q 027158 169 GICLCSSAIAQLTK 182 (227)
Q Consensus 169 ~l~~~~~~~~~~~~ 182 (227)
.+..+...+++..+
T Consensus 161 ~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 161 SYELCVNKLKEARK 174 (198)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887554
No 104
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.78 E-value=2.3e-17 Score=110.89 Aligned_cols=123 Identities=23% Similarity=0.209 Sum_probs=119.1
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLN 82 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 82 (227)
.|++++|+..+++++...|.++.++..+|.++...|++++|...+++++...|.++.++..+|.++...|++++|+..++
T Consensus 14 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 93 (136)
T 2fo7_A 14 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 93 (136)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Q 027158 83 KYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV 125 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 125 (227)
+++...|.++.++..+|.++...|++++|+.++++++..+|.+
T Consensus 94 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 94 KALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999998863
No 105
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.78 E-value=4.3e-18 Score=131.53 Aligned_cols=178 Identities=13% Similarity=-0.012 Sum_probs=151.3
Q ss_pred CCCChHHHHHHHHHHHHhCCCch----hhHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHc
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK----RVGRLEGILLEAKGLWAEAEKAYSSLLED------NPLDPVLHKRRVAIAKAQ 71 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~l~~------~p~~~~~~~~l~~~~~~~ 71 (227)
..|++++|+..+++++...|+++ .++..+|.++...|++++|+..+++++.. .|....++..+|.++...
T Consensus 17 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (338)
T 3ro2_A 17 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVL 96 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHc
Confidence 46899999999999999999874 67889999999999999999999999887 445567899999999999
Q ss_pred CChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHccc--------------------HHHHHHHHHHHHhhC---
Q 027158 72 GNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQM--------------------YKQAAFCYEELILSQ--- 122 (227)
Q Consensus 72 ~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~--------------------~~~A~~~~~~al~~~--- 122 (227)
|++++|+..+++++...|.. ..++..+|.++...|+ +++|+.++++++...
T Consensus 97 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~ 176 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTAL 176 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987654 3489999999999999 999999999998762
Q ss_pred ---CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC-C----chhHHHhHHHHHHHHHhhhc
Q 027158 123 ---PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-K----NTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 123 ---p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-~----~~~~~~~l~~~~~~~~~~~~ 182 (227)
|....++..+|.++...|+ +++|+..++++++..+. . ....+..++.++...++...
T Consensus 177 ~~~~~~~~~~~~l~~~~~~~~~---~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 241 (338)
T 3ro2_A 177 GDRAAQGRAFGNLGNTHYLLGN---FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFET 241 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHH
Confidence 3335689999999999999 99999999999988654 1 13367777777777776543
No 106
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.78 E-value=3e-17 Score=108.95 Aligned_cols=117 Identities=21% Similarity=0.221 Sum_probs=95.0
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYV 103 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~ 103 (227)
..++..+|.++...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++..+|.++.++..+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 56777788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 027158 104 SLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLG 140 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 140 (227)
..|++++|+.++++++..+|+++.++..++.++...|
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 8888888888888888888888888888887776554
No 107
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.7e-17 Score=138.09 Aligned_cols=172 Identities=11% Similarity=-0.010 Sum_probs=157.8
Q ss_pred ChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCC----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC--
Q 027158 5 CLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGL----------WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQG-- 72 (227)
Q Consensus 5 ~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~-- 72 (227)
..++|+..+++++..+|++..+|..++.++...|+ +++++..+.+++..+|.+..+|..++.++...|
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~ 123 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP 123 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSC
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccc
Confidence 34688999999999999999999999999999988 999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcc-cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCC---------
Q 027158 73 NFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQ-MYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGV--------- 142 (227)
Q Consensus 73 ~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~--------- 142 (227)
++++++.++.++++.+|.+..+|...+.+....| .++++++++.++++.+|.+..+|..++.++..++..
T Consensus 124 ~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~ 203 (567)
T 1dce_A 124 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRL 203 (567)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSS
T ss_pred cHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccc
Confidence 6799999999999999999999999999999999 999999999999999999999999999999886221
Q ss_pred --CcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHH
Q 027158 143 --DNILLAKKYYASTIDLTGGKNTKALFGICLCSSAI 177 (227)
Q Consensus 143 --~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (227)
+.++++++++.+++..+|+ +..+|+....+....
T Consensus 204 ~~~~~~eel~~~~~ai~~~P~-~~saW~y~~~ll~~~ 239 (567)
T 1dce_A 204 PENVLLKELELVQNAFFTDPN-DQSAWFYHRWLLGRA 239 (567)
T ss_dssp CHHHHHHHHHHHHHHHHHCSS-CSHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHHHHhhCCC-CccHHHHHHHHHhcC
Confidence 3389999999999999996 777877766666543
No 108
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.78 E-value=2.4e-19 Score=145.91 Aligned_cols=150 Identities=13% Similarity=0.105 Sum_probs=126.5
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHH
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD---------------PVLHKRRVAIA 68 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~ 68 (227)
+++++|+..++..+...|.....+..+|..++..|++++|+..|++++..+|.+ ..++.++|.++
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~ 327 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCY 327 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666777777778888889999999999999999999999999999988 68899999999
Q ss_pred HHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHH
Q 027158 69 KAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLA 148 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A 148 (227)
...|++++|+..|+++++++|+++.+|+++|.+|...|++++|+..|++++.++|++..++..++.++...|+ +.+|
T Consensus 328 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~---~~~a 404 (457)
T 1kt0_A 328 LKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKE---HNER 404 (457)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHH---HHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH---HHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 8776
Q ss_pred HH-HHHHHh
Q 027158 149 KK-YYASTI 156 (227)
Q Consensus 149 ~~-~~~~~~ 156 (227)
.. .|.+++
T Consensus 405 ~~~~~~~~f 413 (457)
T 1kt0_A 405 DRRIYANMF 413 (457)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 64 344443
No 109
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.78 E-value=7.6e-18 Score=113.45 Aligned_cols=99 Identities=11% Similarity=0.104 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCH-------HHHHH
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH-------DAWRE 97 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~-------~~~~~ 97 (227)
.++..+|..++..|++++|+.+|+++++++|+++.++.++|.++...|++++|+..|+++++++|++. .++..
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 34455566666666666666666666666666666666666666666666666666666666555442 34555
Q ss_pred HHHHHHHcccHHHHHHHHHHHHhhCC
Q 027158 98 LAEIYVSLQMYKQAAFCYEELILSQP 123 (227)
Q Consensus 98 la~~~~~~~~~~~A~~~~~~al~~~p 123 (227)
+|.++...|++++|+.+|++++...|
T Consensus 89 lg~~~~~~~~~~~A~~~~~kal~~~~ 114 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRSLSEFR 114 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 55555555555555555555555544
No 110
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.78 E-value=2.4e-18 Score=136.78 Aligned_cols=175 Identities=15% Similarity=0.005 Sum_probs=150.5
Q ss_pred hHHHHHHHHHHHHhC------CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHcCC
Q 027158 6 LDVAKDCIKVLQKQF------PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP------VLHKRRVAIAKAQGN 73 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~------~~~~~l~~~~~~~~~ 73 (227)
+++|+..+++++... |....++..+|.++...|++++|+..+++++...|... .++..+|.++...|+
T Consensus 163 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 242 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE 242 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 889999999888763 23456788999999999999999999999998865443 389999999999999
Q ss_pred hHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCC
Q 027158 74 FPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV------PLYHLAYADVLYTLGG 141 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~ 141 (227)
+++|+.++++++...|.. ..++..+|.++...|++++|+.++++++...+.. ..++..+|.++...|+
T Consensus 243 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 322 (406)
T 3sf4_A 243 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGN 322 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 999999999999998766 7789999999999999999999999999876543 6689999999999999
Q ss_pred CCcHHHHHHHHHHHhhhcCC-----CchhHHHhHHHHHHHHHhhhcC
Q 027158 142 VDNILLAKKYYASTIDLTGG-----KNTKALFGICLCSSAIAQLTKG 183 (227)
Q Consensus 142 ~~~~~~A~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~ 183 (227)
+++|+.+|++++++.+. ....++..++.++..+++....
T Consensus 323 ---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 366 (406)
T 3sf4_A 323 ---HDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYST 366 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHhHHH
Confidence 99999999999988543 2466778888888888875443
No 111
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.77 E-value=1.3e-17 Score=113.23 Aligned_cols=121 Identities=9% Similarity=-0.041 Sum_probs=74.7
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 027158 54 NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYA 133 (227)
Q Consensus 54 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 133 (227)
+|.++..+..+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+.++++++..+|+++.++..+|
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 45556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhhhcCC----CchhHHHhHHHHHHHH
Q 027158 134 DVLYTLGGVDNILLAKKYYASTIDLTGG----KNTKALFGICLCSSAI 177 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~ 177 (227)
.++...|+ +++|+..|++++++.|+ ........+..+....
T Consensus 85 ~~~~~~~~---~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 85 QCQLEMES---YDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp HHHHHTTC---HHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHhh---HHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHH
Confidence 66666666 66666666666666553 1334444444444433
No 112
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.77 E-value=2.6e-16 Score=121.77 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=151.9
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC-hHHHHHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGL--WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGN-FPTAIEWLN 82 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~--~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~-~~~A~~~~~ 82 (227)
+++++.+++.++..+|++..+|..++.++...++ +++++.++.+++..+|.+..+|...+.+....|. +++++.++.
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 6789999999999999999999999999999994 9999999999999999999999999999999998 599999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHc--------------ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-CCC-----
Q 027158 83 KYLETFMADHDAWRELAEIYVSL--------------QMYKQAAFCYEELILSQPTVPLYHLAYADVLYTL-GGV----- 142 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~--------------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g~~----- 142 (227)
++++.+|.+..+|..++.++... +.++++++++.+++..+|++..+|+.+..++... |..
T Consensus 170 ~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~ 249 (331)
T 3dss_A 170 SLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVE 249 (331)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchH
Confidence 99999999999999999999887 6799999999999999999999998666665554 310
Q ss_pred --CcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHH
Q 027158 143 --DNILLAKKYYASTIDLTGGKNTKALFGICLCSSAI 177 (227)
Q Consensus 143 --~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (227)
+.+++++..+.+++++.|+ +...+.++++....+
T Consensus 250 ~~~~l~~el~~~~elle~~pd-~~w~l~~~~~~~~~~ 285 (331)
T 3dss_A 250 KSTVLQSELESCKELQELEPE-NKWCLLTIILLMRAL 285 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcc-cchHHHHHHHHHHhh
Confidence 2389999999999999996 777766666554444
No 113
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.77 E-value=1.3e-17 Score=111.35 Aligned_cols=101 Identities=19% Similarity=0.036 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc
Q 027158 26 VGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSL 105 (227)
Q Consensus 26 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~ 105 (227)
.++.+|..+...|++++|+..|+++++.+|+++.+|..+|.++...|++++|+..|+++++++|+++.++..+|.++...
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45666777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccHHHHHHHHHHHHhhCCCCH
Q 027158 106 QMYKQAAFCYEELILSQPTVP 126 (227)
Q Consensus 106 ~~~~~A~~~~~~al~~~p~~~ 126 (227)
|++++|+.+|++++..+|.+.
T Consensus 99 g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHhCcCCC
Confidence 777777777777777776553
No 114
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=2.6e-17 Score=110.75 Aligned_cols=121 Identities=21% Similarity=0.205 Sum_probs=113.9
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 027158 54 NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYA 133 (227)
Q Consensus 54 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 133 (227)
.|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+.++++++..+|.++.++..+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHH
Q 027158 134 DVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIA 178 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 178 (227)
.++...|+ +++|+..|+++++.+|. +...+..++.++...+
T Consensus 92 ~~~~~~~~---~~~A~~~~~~~~~~~p~-~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 92 AALEAMKD---YTKAMDVYQKALDLDSS-CKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHTTC---HHHHHHHHHHHHHHCGG-GTHHHHHHHHHHHHHT
T ss_pred HHHHHHhh---HHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHhc
Confidence 99999999 99999999999999995 8888888888776543
No 115
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.77 E-value=4e-17 Score=135.10 Aligned_cols=169 Identities=11% Similarity=0.005 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHH-------cCCHH-------HHHHHHHHHHh-cCCCCHHHHHHHHHHHHHc
Q 027158 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEA-------KGLWA-------EAEKAYSSLLE-DNPLDPVLHKRRVAIAKAQ 71 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~-------~~~~~-------~A~~~~~~~l~-~~p~~~~~~~~l~~~~~~~ 71 (227)
.+++..|++++..+|.++.+|+.+|..+.. .|+++ +|...|+++++ ..|++..+|..++.++...
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 367789999999999999999999998886 68876 89999999997 7899999999999999999
Q ss_pred CChHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCCCcHHHHH
Q 027158 72 GNFPTAIEWLNKYLETFMADH-DAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADV-LYTLGGVDNILLAK 149 (227)
Q Consensus 72 ~~~~~A~~~~~~~l~~~p~~~-~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~-~~~~g~~~~~~~A~ 149 (227)
|++++|...|+++++..|.++ .+|..+|.++...|++++|..+|+++++..|.+...+...+.+ +...|+ +++|.
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~---~~~A~ 411 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD---KSVAF 411 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCC---HHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCC---hhHHH
Confidence 999999999999999999885 5899999999999999999999999999888877766666655 345888 99999
Q ss_pred HHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 150 KYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
..|+++++..|+ ++..+..++......++
T Consensus 412 ~~~e~al~~~p~-~~~~~~~~~~~~~~~g~ 440 (530)
T 2ooe_A 412 KIFELGLKKYGD-IPEYVLAYIDYLSHLNE 440 (530)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHCCC-CHHHHHHHHHHHHhCCC
Confidence 999999999985 77777777666554443
No 116
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.77 E-value=3.3e-17 Score=120.01 Aligned_cols=158 Identities=10% Similarity=0.002 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC----ChHHHHHHHH
Q 027158 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQG----NFPTAIEWLN 82 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~----~~~~A~~~~~ 82 (227)
.+|+..|+++.+. .++.+++.+|.++...+++++|+.+|+++.+. .++.+++.+|.+|.. + ++++|+.+|+
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 3578888998875 68999999999999999999999999999875 689999999999998 7 8999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHH----cCCCCcHHHHHHHH
Q 027158 83 KYLETFMADHDAWRELAEIYVS----LQMYKQAAFCYEELILSQP--TVPLYHLAYADVLYT----LGGVDNILLAKKYY 152 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~~la~~~~~----~g~~~~~~~A~~~~ 152 (227)
++. .+.++.+++.+|.+|.. .+++++|+.+|+++....| .++.+++.+|.+|.. .++ +++|+.+|
T Consensus 78 ~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d---~~~A~~~~ 152 (212)
T 3rjv_A 78 KAV--EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPED---DVKASEYF 152 (212)
T ss_dssp HHH--HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCC---HHHHHHHH
T ss_pred HHH--HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCC---HHHHHHHH
Confidence 995 57899999999999998 8999999999999999988 458999999999998 667 99999999
Q ss_pred HHHhhhcCCCchhHHHhHHHHHHH
Q 027158 153 ASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
+++++. |+ +..+++.++.++..
T Consensus 153 ~~A~~~-~~-~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 153 KGSSSL-SR-TGYAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHT-SC-TTHHHHHHHHHHHH
T ss_pred HHHHHc-CC-CHHHHHHHHHHHHc
Confidence 999998 53 66688888888765
No 117
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.77 E-value=6.4e-17 Score=106.33 Aligned_cols=113 Identities=19% Similarity=0.147 Sum_probs=77.5
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYV 103 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~ 103 (227)
+..+..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 34556666666777777777777777777777666666677777777777777777777777777766667777777777
Q ss_pred HcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 027158 104 SLQMYKQAAFCYEELILSQPTVPLYHLAYADVL 136 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 136 (227)
..|++++|+.++++++..+|+++.++..++.+.
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 777777777777777777776666666666543
No 118
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.76 E-value=2.8e-18 Score=137.12 Aligned_cols=177 Identities=15% Similarity=0.071 Sum_probs=144.4
Q ss_pred CCChHHHHHHHHHHHHh------CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQ------FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLED------NPLDPVLHKRRVAIAKA 70 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~------~p~~~~~~~~l~~~~~~ 70 (227)
.|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++.. .|....++..+|.++..
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA 178 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 57899999999999887 4566778889999999999999999999999887 45566788899999999
Q ss_pred cCC-----------------hHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCH-
Q 027158 71 QGN-----------------FPTAIEWLNKYLETF------MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP- 126 (227)
Q Consensus 71 ~~~-----------------~~~A~~~~~~~l~~~------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~- 126 (227)
.|+ +++|+.++++++++. |....++..+|.++...|++++|+.++++++...|...
T Consensus 179 ~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 258 (411)
T 4a1s_A 179 KGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGD 258 (411)
T ss_dssp HHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCC
Confidence 999 999999999988764 23355888999999999999999999999998776432
Q ss_pred -----HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC-----CchhHHHhHHHHHHHHHhhhc
Q 027158 127 -----LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-----KNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 127 -----~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~ 182 (227)
.++..+|.++...|+ +++|+.+|++++...+. .....+..++.++...++..+
T Consensus 259 ~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 321 (411)
T 4a1s_A 259 RAAERRANSNLGNSHIFLGQ---FEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNT 321 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cHHHHHHHHHHHHHHHHCcC---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 278899999999999 99999999999988764 125566777777777666543
No 119
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=1.2e-17 Score=112.47 Aligned_cols=102 Identities=12% Similarity=0.098 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCH-------HHH
Q 027158 57 DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP-------LYH 129 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~ 129 (227)
...++..+|..++..|++++|+.+|+++++++|+++.+|.++|.+|...|+|++|+..|++++.++|++. .++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999988653 478
Q ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 130 LAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 130 ~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.++|.++..+|+ +++|+..|++++...|+
T Consensus 87 ~~lg~~~~~~~~---~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 87 SRAGNAFQKQND---LSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHTTC---HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCC---HHHHHHHHHHHHhhCcC
Confidence 899999999999 99999999999999885
No 120
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.76 E-value=9.8e-17 Score=108.82 Aligned_cols=122 Identities=16% Similarity=-0.008 Sum_probs=111.9
Q ss_pred hCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHH
Q 027158 19 QFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWREL 98 (227)
Q Consensus 19 ~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l 98 (227)
..|.++..+..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.+|..+
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 83 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 83 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcccHHHHHHHHHHHHhhCCC-----CHHHHHHHHHHHHHcC
Q 027158 99 AEIYVSLQMYKQAAFCYEELILSQPT-----VPLYHLAYADVLYTLG 140 (227)
Q Consensus 99 a~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~la~~~~~~g 140 (227)
|.++...|++++|+.+|++++..+|+ +..+...+..+.....
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 6667777766655443
No 121
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.76 E-value=4.7e-17 Score=134.66 Aligned_cols=156 Identities=15% Similarity=0.104 Sum_probs=144.8
Q ss_pred CCChH-------HHHHHHHHHHH-hCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCC
Q 027158 3 CQCLD-------VAKDCIKVLQK-QFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP-VLHKRRVAIAKAQGN 73 (227)
Q Consensus 3 ~~~~~-------~A~~~~~~~~~-~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~~~~ 73 (227)
.|+++ +|..+|++++. ..|++..++..+|.++...|++++|...|+++++..|.++ .+|..++.++...|+
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 371 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG 371 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcC
Confidence 57776 99999999997 7999999999999999999999999999999999999986 699999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH
Q 027158 74 FPTAIEWLNKYLETFMADHDAWRELAEI-YVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYY 152 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~~~~~~~la~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~ 152 (227)
+++|+..|+++++..|.+...+...+.+ +...|++++|..+|+++++..|+++.+|..++.++...|+ .++|...|
T Consensus 372 ~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~---~~~Ar~~~ 448 (530)
T 2ooe_A 372 IKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE---DNNTRVLF 448 (530)
T ss_dssp HHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTC---HHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCC---HhhHHHHH
Confidence 9999999999999999888887777766 3468999999999999999999999999999999999999 99999999
Q ss_pred HHHhhhcCC
Q 027158 153 ASTIDLTGG 161 (227)
Q Consensus 153 ~~~~~~~~~ 161 (227)
++++...|.
T Consensus 449 ~~al~~~~~ 457 (530)
T 2ooe_A 449 ERVLTSGSL 457 (530)
T ss_dssp HHHHHSCCS
T ss_pred HHHHhccCC
Confidence 999998764
No 122
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.76 E-value=4e-17 Score=109.27 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=115.9
Q ss_pred cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHH
Q 027158 53 DNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAY 132 (227)
Q Consensus 53 ~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 132 (227)
.+|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+.++++++..+|+++.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 133 ADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 133 a~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
|.++...|+ +++|+..|+++++..|+ +...+..++.++..+++
T Consensus 87 ~~~~~~~~~---~~~A~~~~~~~~~~~p~-~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 87 GLALSSLNK---HVEAVAYYKKALELDPD-NETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHTTC---HHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCC---HHHHHHHHHHHHhcCcc-chHHHHHHHHHHHHHhc
Confidence 999999999 99999999999999995 88888899888887765
No 123
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.76 E-value=2.4e-16 Score=121.93 Aligned_cols=161 Identities=11% Similarity=0.027 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCC----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC--h
Q 027158 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGL----------WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGN--F 74 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~--~ 74 (227)
++|+.++..++..+|++..+|...+.++...+. +++++.++..++..+|.+..+|..++.++...|. +
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccH
Confidence 489999999999999999999999999988776 6899999999999999999999999999999984 8
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccc-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-----------C
Q 027158 75 PTAIEWLNKYLETFMADHDAWRELAEIYVSLQM-YKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG-----------V 142 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-----------~ 142 (227)
++++.++.++++.+|.+..+|...+.+....|. +++++.++.+++..+|.|..+|..++.++...+. .
T Consensus 127 ~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~ 206 (331)
T 3dss_A 127 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPE 206 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccch
Confidence 999999999999999999999999999999998 6999999999999999999999999999988721 0
Q ss_pred CcHHHHHHHHHHHhhhcCCCchhHHH
Q 027158 143 DNILLAKKYYASTIDLTGGKNTKALF 168 (227)
Q Consensus 143 ~~~~~A~~~~~~~~~~~~~~~~~~~~ 168 (227)
+.+++++.++.+++..+|+ +..+|+
T Consensus 207 ~~~~eEle~~~~ai~~~P~-d~SaW~ 231 (331)
T 3dss_A 207 NVLLKELELVQNAFFTDPN-DQSAWF 231 (331)
T ss_dssp HHHHHHHHHHHHHHHHSTT-CHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCC-CHHHHH
Confidence 2389999999999999996 777775
No 124
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.76 E-value=1.4e-17 Score=127.82 Aligned_cols=156 Identities=9% Similarity=-0.014 Sum_probs=131.6
Q ss_pred CCCChHHHHHHHHHHHHhCCCchh------hHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKR------VGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD------PVLHKRRVAIAK 69 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~------~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~l~~~~~ 69 (227)
..|++++|...+++++...+..+. .+..+|.++...+++++|+..+++++...+.. ..++..+|.+|.
T Consensus 87 ~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 3u3w_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 368999999999999998776554 23357888888899999999999999864432 347899999999
Q ss_pred HcCChHHHHHHHHHHHHHcC---CC----HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHHHHHHH
Q 027158 70 AQGNFPTAIEWLNKYLETFM---AD----HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV------PLYHLAYADVL 136 (227)
Q Consensus 70 ~~~~~~~A~~~~~~~l~~~p---~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~ 136 (227)
..|++++|+.+|+++++... .+ ..+++++|.+|...|+|++|+.++++++.+.+.. ..++..+|.++
T Consensus 167 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~ 246 (293)
T 3u3w_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECL 246 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999996422 22 4588999999999999999999999999876533 77899999999
Q ss_pred HHcC-CCCcHHHHHHHHHHHhhhcC
Q 027158 137 YTLG-GVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 137 ~~~g-~~~~~~~A~~~~~~~~~~~~ 160 (227)
..+| . +++|+.+|++++.+..
T Consensus 247 ~~~g~~---~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 247 RKLEYE---EAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHTTCC---HHHHHHHHHHHHHHHH
T ss_pred HHhCCc---HHHHHHHHHHHHHHHH
Confidence 9999 5 6999999999998754
No 125
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.76 E-value=7e-17 Score=113.09 Aligned_cols=119 Identities=9% Similarity=0.001 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHH------------------cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 59 VLHKRRVAIAKAQGNFPTAIEWLNKYLET------------------FMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~------------------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
..+...|..++..|++++|+..|.+++.. +|.+..+|.++|.++...|+|++|+..+++++.
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 34455555555555555555555555555 677788999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCch-hHHHhHHHHHHHHHhhh
Q 027158 121 SQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNT-KALFGICLCSSAIAQLT 181 (227)
Q Consensus 121 ~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~ 181 (227)
++|+++.+++.+|.++..+|+ +++|+..|++++.++|+ +. .....+..+...+.+..
T Consensus 92 ~~p~~~~a~~~~g~~~~~~g~---~~~A~~~~~~al~l~p~-~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 92 REETNEKALFRRAKARIAAWK---LDEAEEDLKLLLRNHPA-AASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HSTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcchHHHHHHHHHHHHHhc---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 99999999999999996 65 55667777777666544
No 126
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.76 E-value=2.1e-17 Score=119.41 Aligned_cols=174 Identities=12% Similarity=0.096 Sum_probs=138.4
Q ss_pred CCCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHcCCh
Q 027158 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLE------DNPLDPVLHKRRVAIAKAQGNF 74 (227)
Q Consensus 1 l~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~------~~p~~~~~~~~l~~~~~~~~~~ 74 (227)
+..|++++|...++.+....+....++..+|.++...|++++|+.++++++. ..|....++..+|.++...|++
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 82 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW 82 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 4679999999966655443336788999999999999999999999999999 3455568899999999999999
Q ss_pred HHHHHHHHHHHHH---cCCC----HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC--CCH----HHHHHHHHHHHHcCC
Q 027158 75 PTAIEWLNKYLET---FMAD----HDAWRELAEIYVSLQMYKQAAFCYEELILSQP--TVP----LYHLAYADVLYTLGG 141 (227)
Q Consensus 75 ~~A~~~~~~~l~~---~p~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p--~~~----~~~~~la~~~~~~g~ 141 (227)
++|+..+++++.. .+++ ..++..+|.++...|++++|+.++++++...+ .++ .++..+|.++...|+
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 162 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKN 162 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcC
Confidence 9999999999998 4433 45789999999999999999999999997642 222 356899999999999
Q ss_pred CCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 142 VDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 142 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+++|..++++++++... ....++.+.+...+..
T Consensus 163 ---~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~~~ 195 (203)
T 3gw4_A 163 ---LLEAQQHWLRARDIFAE--LEDSEAVNELMTRLNG 195 (203)
T ss_dssp ---HHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHH--cCCHHHHHHHHhcccc
Confidence 99999999999998653 2222344555555444
No 127
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.76 E-value=1.4e-16 Score=122.16 Aligned_cols=156 Identities=10% Similarity=-0.003 Sum_probs=118.1
Q ss_pred CCCChHHHHHHHHHHHHhCCCch------hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK------RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD------PVLHKRRVAIAK 69 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~------~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~l~~~~~ 69 (227)
..|++++|+..+.+++...|... ..+..+|.++...|++++|+..+++++...+.. ..++..+|.++.
T Consensus 87 ~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 2qfc_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 35788888888888888776533 234567777788888888888888888764433 457788888888
Q ss_pred HcCChHHHHHHHHHHH---HHcCCCH----HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC------CHHHHHHHHHHH
Q 027158 70 AQGNFPTAIEWLNKYL---ETFMADH----DAWRELAEIYVSLQMYKQAAFCYEELILSQPT------VPLYHLAYADVL 136 (227)
Q Consensus 70 ~~~~~~~A~~~~~~~l---~~~p~~~----~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~la~~~ 136 (227)
..|++++|+.+|++++ +..|.+. .+++++|.+|...|+|++|+.++++++.+.+. ...++.++|.++
T Consensus 167 ~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y 246 (293)
T 2qfc_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECL 246 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 8888888888888888 4455543 57888888888888888888888888876532 156788888888
Q ss_pred HHcCCCCcHHHH-HHHHHHHhhhcC
Q 027158 137 YTLGGVDNILLA-KKYYASTIDLTG 160 (227)
Q Consensus 137 ~~~g~~~~~~~A-~~~~~~~~~~~~ 160 (227)
..+|+ +++| ..+|++++.+..
T Consensus 247 ~~~g~---~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 247 RKLEY---EEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHTTC---CHHHHHHHHHHHHHHHH
T ss_pred HHcCC---cHHHHHHHHHHHHHHHH
Confidence 88888 8888 777888877643
No 128
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.76 E-value=2.4e-17 Score=113.60 Aligned_cols=114 Identities=15% Similarity=0.078 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCC-------CH-----HHHHHHHHHHHHcccHHHHHHHHHHHHhh-----
Q 027158 59 VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA-------DH-----DAWRELAEIYVSLQMYKQAAFCYEELILS----- 121 (227)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~-------~~-----~~~~~la~~~~~~~~~~~A~~~~~~al~~----- 121 (227)
..+...|..++..|++++|+..|+++++++|+ +. .+|.++|.++...|+|++|+.+|++++.+
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~ 91 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG 91 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc
Confidence 44566677777777777777777777777776 43 39999999999999999999999999999
Q ss_pred --CCCCHHHH----HHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHH
Q 027158 122 --QPTVPLYH----LAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 122 --~p~~~~~~----~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
+|++..+| +++|.++..+|+ +++|+..|+++++++|+ +....-.+..+...
T Consensus 92 e~~pd~~~A~~~~~~~rG~aL~~lgr---~eEAl~~y~kAlel~p~-d~~~~~~~~~~~~~ 148 (159)
T 2hr2_A 92 ELNQDEGKLWISAVYSRALALDGLGR---GAEAMPEFKKVVEMIEE-RKGETPGKERMMEV 148 (159)
T ss_dssp CTTSTHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH-CCSCCTTHHHHHHH
T ss_pred cCCCchHHHHHHHHHhHHHHHHHCCC---HHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHH
Confidence 99999999 999999999999 99999999999999996 55444444444333
No 129
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.76 E-value=1.5e-16 Score=123.66 Aligned_cols=174 Identities=11% Similarity=0.024 Sum_probs=158.4
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-C-ChHHHHHH
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKG-LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ-G-NFPTAIEW 80 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~-~-~~~~A~~~ 80 (227)
+..++|+.++.+++..+|++..+|..++.++...| .+++++.++..++..+|.+..+|..++.++... + ++++++.+
T Consensus 68 e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~ 147 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEY 147 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 35578999999999999999999999999999999 599999999999999999999999999999988 8 89999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHcccHH--------HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCC----CcHHHH
Q 027158 81 LNKYLETFMADHDAWRELAEIYVSLQMYK--------QAAFCYEELILSQPTVPLYHLAYADVLYTLGGV----DNILLA 148 (227)
Q Consensus 81 ~~~~l~~~p~~~~~~~~la~~~~~~~~~~--------~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~----~~~~~A 148 (227)
+.++++.+|.+..+|...+.+....|.++ ++++++++++..+|.|..+|...+.++...+.. ..++++
T Consensus 148 ~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eE 227 (349)
T 3q7a_A 148 IHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDE 227 (349)
T ss_dssp HHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHH
Confidence 99999999999999999999999999888 999999999999999999999999999988751 126899
Q ss_pred HHHHHHHhhhcCCCchhHHHhHHHHHHHHH
Q 027158 149 KKYYASTIDLTGGKNTKALFGICLCSSAIA 178 (227)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 178 (227)
++++.+++..+|+ +..+|+.+.-+....+
T Consensus 228 Le~~~~aI~~~P~-n~SaW~Ylr~Ll~~~~ 256 (349)
T 3q7a_A 228 LIYILKSIHLIPH-NVSAWNYLRGFLKHFS 256 (349)
T ss_dssp HHHHHHHHHHCTT-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCC-CHHHHHHHHHHHHhcC
Confidence 9999999999996 8888876555555433
No 130
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.76 E-value=4.5e-17 Score=118.76 Aligned_cols=140 Identities=16% Similarity=0.069 Sum_probs=124.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++ +.++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|
T Consensus 18 ~~~~~~~A~~~~~~a~---~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~ 94 (213)
T 1hh8_A 18 DKKDWKGALDAFSAVQ---DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDL 94 (213)
T ss_dssp HTTCHHHHHHHHHTSS---SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHc---CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHH
Confidence 4689999999999985 3378899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCH----------------HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcH
Q 027158 82 NKYLETFMADH----------------DAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNI 145 (227)
Q Consensus 82 ~~~l~~~p~~~----------------~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~ 145 (227)
+++++..|.+. .++..+|.++...|++++|+.+|++++..+|++.. +. .
T Consensus 95 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~------------~~---~ 159 (213)
T 1hh8_A 95 KEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH------------SK---I 159 (213)
T ss_dssp HHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG------------GH---H
T ss_pred HHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc------------ch---H
Confidence 99999888766 99999999999999999999999999999998632 34 6
Q ss_pred HHHHHHHHHHhhhc
Q 027158 146 LLAKKYYASTIDLT 159 (227)
Q Consensus 146 ~~A~~~~~~~~~~~ 159 (227)
..|+..+.+.....
T Consensus 160 ~~a~~~~~~~~~~~ 173 (213)
T 1hh8_A 160 DKAMECVWKQKLYE 173 (213)
T ss_dssp HHHHHHHHTTCCCC
T ss_pred HHHHHHHHhccccc
Confidence 66666665544433
No 131
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.75 E-value=1.4e-17 Score=128.71 Aligned_cols=175 Identities=12% Similarity=0.061 Sum_probs=121.3
Q ss_pred CCCCChHHHHHHHHHHHHhCCCc-----------hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHH
Q 027158 1 MDCQCLDVAKDCIKVLQKQFPES-----------KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD------PVLHKR 63 (227)
Q Consensus 1 l~~~~~~~A~~~~~~~~~~~p~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~ 63 (227)
|..|++++|..+++++....+.. ...+...|.++...|++++|+..|.+++...+.. ..++..
T Consensus 2 ~~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~ 81 (307)
T 2ifu_A 2 IAAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQ 81 (307)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45677788888887777654321 1234455677777888888888888887764422 356777
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHH
Q 027158 64 RVAIAKAQGNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV------PLYHLA 131 (227)
Q Consensus 64 l~~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 131 (227)
+|.++...|++++|+.+|++++++.+.. ..++.++|.+|.. |++++|+.+|++++.+.|.. ..++.+
T Consensus 82 lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 160 (307)
T 2ifu_A 82 AGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGK 160 (307)
T ss_dssp HHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 8888888888888888888888775432 4567788888877 88888888888888776543 456778
Q ss_pred HHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCc-----hhHHHhHHHHHHHHHh
Q 027158 132 YADVLYTLGGVDNILLAKKYYASTIDLTGGKN-----TKALFGICLCSSAIAQ 179 (227)
Q Consensus 132 la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ 179 (227)
+|.++..+|+ +++|+.+|++++.+.|... ...+.+++.++..+++
T Consensus 161 lg~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 210 (307)
T 2ifu_A 161 ASRLLVRQQK---FDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRAD 210 (307)
T ss_dssp HHHHHHHTTC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCC---HHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCC
Confidence 8888888888 8888888888887765411 2355566666665444
No 132
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.75 E-value=2e-16 Score=121.58 Aligned_cols=169 Identities=11% Similarity=0.084 Sum_probs=154.8
Q ss_pred ChHHHHHHHHHHHHhCCCchhhHHHHHHHH----HHc---CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChH--
Q 027158 5 CLDVAKDCIKVLQKQFPESKRVGRLEGILL----EAK---GLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFP-- 75 (227)
Q Consensus 5 ~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~-- 75 (227)
++++++..++.++..+|++..+|..++.++ ... +++++++.++.+++..+|.+..+|..++.+....|.++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~ 163 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDA 163 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCH
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChH
Confidence 899999999999999999999999999999 777 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHccc------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHH-H
Q 027158 76 TAIEWLNKYLETFMADHDAWRELAEIYVSLQM------YKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILL-A 148 (227)
Q Consensus 76 ~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~-A 148 (227)
+++.++.++++.+|.+..+|...+.+....+. ++++++++.+++..+|.+..+|..++.++...|+ ... .
T Consensus 164 ~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~---~~~~~ 240 (306)
T 3dra_A 164 KELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR---SITQL 240 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC---CGGGG
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC---ChHHH
Confidence 99999999999999999999999999999987 9999999999999999999999999999999997 544 5
Q ss_pred HHHHHHHhhhc---CCCchhHHHhHHHHHHHH
Q 027158 149 KKYYASTIDLT---GGKNTKALFGICLCSSAI 177 (227)
Q Consensus 149 ~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 177 (227)
...+.++++++ | ....++..++.++...
T Consensus 241 ~~~~~~~~~~~~~~~-~s~~al~~la~~~~~~ 271 (306)
T 3dra_A 241 EEFSLQFVDLEKDQV-TSSFALETLAKIYTQQ 271 (306)
T ss_dssp HHHHHTTEEGGGTEE-SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhccCCCC-CCHHHHHHHHHHHHcc
Confidence 55777777776 5 3778888888887743
No 133
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.1e-16 Score=109.69 Aligned_cols=118 Identities=21% Similarity=0.140 Sum_probs=99.2
Q ss_pred CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHH
Q 027158 20 FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD---PVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWR 96 (227)
Q Consensus 20 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 96 (227)
.|.+...++.+|..+...|++++|+..|++++..+|++ ..++..+|.++...|++++|+..+++++..+|.++.+++
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 103 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALY 103 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHH
Confidence 45677788888888888888888888888888888877 788888888888888888888888888888888888888
Q ss_pred HHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 027158 97 ELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLY 137 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 137 (227)
.+|.++...|++++|+.+|++++..+|++..++..++.+..
T Consensus 104 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 104 RRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 88888888888888888888888888888888877776654
No 134
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.75 E-value=1.7e-17 Score=116.20 Aligned_cols=119 Identities=17% Similarity=0.047 Sum_probs=108.9
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLED------------------NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKY 84 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~------------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 84 (227)
....+...|..++..|++++|+..|.+++.. +|.+..++.++|.++...|++++|+..++++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3567788999999999999999999999998 6777799999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHcCC
Q 027158 85 LETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP-LYHLAYADVLYTLGG 141 (227)
Q Consensus 85 l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~la~~~~~~g~ 141 (227)
+.++|.++.+|+.+|.++...|++++|+..|++++.++|+++ .+...++.+....++
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 667777776655443
No 135
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.75 E-value=2.1e-17 Score=126.19 Aligned_cols=145 Identities=13% Similarity=-0.001 Sum_probs=103.6
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAE 100 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~ 100 (227)
|.+...+..+|..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45566777778888888888888888888888888778888888888888888888888888888888888888888888
Q ss_pred HHHHcccHHHHHHHHHHHHhhCCCCH-------------------------------HHHHHHHHHHHHcCCCCcHHHHH
Q 027158 101 IYVSLQMYKQAAFCYEELILSQPTVP-------------------------------LYHLAYADVLYTLGGVDNILLAK 149 (227)
Q Consensus 101 ~~~~~~~~~~A~~~~~~al~~~p~~~-------------------------------~~~~~la~~~~~~g~~~~~~~A~ 149 (227)
++...|++++|+..|++++.++|+++ .+...++.. ..|+ +++|+
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~---~~~A~ 155 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAE---REREL 155 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHH---HHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHH---HHHHH
Confidence 88888888888888888877776542 222222222 2455 77888
Q ss_pred HHHHHHhhhcCCCchhHHHhHH
Q 027158 150 KYYASTIDLTGGKNTKALFGIC 171 (227)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~ 171 (227)
..|+++++.+|+ +......+.
T Consensus 156 ~~~~~al~~~p~-~~~~~~~l~ 176 (281)
T 2c2l_A 156 EECQRNHEGHED-DGHIRAQQA 176 (281)
T ss_dssp TTTSGGGTTTSC-HHHHTHHHH
T ss_pred HHHHhhhccccc-hhhhhhHHH
Confidence 888888887775 544444443
No 136
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.75 E-value=8e-18 Score=129.98 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=146.3
Q ss_pred CCCChHHHHHHHHHHHHh------CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQ------FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD------PVLHKRRVAIAK 69 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~l~~~~~ 69 (227)
..|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++...|.. ..++..+|.++.
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 134 (338)
T 3ro2_A 55 YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYH 134 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 368999999999998876 33456788899999999999999999999999875533 348889999999
Q ss_pred HcCC--------------------hHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Q 027158 70 AQGN--------------------FPTAIEWLNKYLETF------MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQP 123 (227)
Q Consensus 70 ~~~~--------------------~~~A~~~~~~~l~~~------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 123 (227)
..|+ +++|+..+++++... |....++..+|.++...|++++|+.++++++...|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 135 AKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999 999999999998763 33456899999999999999999999999998765
Q ss_pred CC------HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC-----chhHHHhHHHHHHHHHhhhc
Q 027158 124 TV------PLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK-----NTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 124 ~~------~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~ 182 (227)
.. ..++..+|.++...|+ +++|...++++++..+.. ....+..++.++...++..+
T Consensus 215 ~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 281 (338)
T 3ro2_A 215 EFGDKAAERRAYSNLGNAYIFLGE---FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEK 281 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hcCChHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHH
Confidence 32 2388999999999999 999999999999886641 15566777777777666543
No 137
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.74 E-value=2e-17 Score=127.79 Aligned_cols=154 Identities=13% Similarity=0.067 Sum_probs=135.0
Q ss_pred CCChHHHHHHHHHHHHhCCC------chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--C----HHHHHHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPE------SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL--D----PVLHKRRVAIAKA 70 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~--~----~~~~~~l~~~~~~ 70 (227)
.|++++|+..|.+++...+. ...++..+|.++...|++++|+.+|++++.+.+. + ..++..+|.++..
T Consensus 49 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 128 (307)
T 2ifu_A 49 AKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP 128 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc
Confidence 58899999999999988652 2457888999999999999999999999998432 2 4678899999998
Q ss_pred cCChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 027158 71 QGNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV------PLYHLAYADVLYT 138 (227)
Q Consensus 71 ~~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~ 138 (227)
|++++|+.+|++++++.|.. ..++.++|.++...|++++|+.+|++++.+.|.+ ..++..+|.++..
T Consensus 129 -g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~ 207 (307)
T 2ifu_A 129 -LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLH 207 (307)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHH
Confidence 99999999999999998754 5789999999999999999999999999886643 3478889999999
Q ss_pred cCCCCcHHHHHHHHHHHhhhcCC
Q 027158 139 LGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 139 ~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+|+ +++|+.+|++++ +.|.
T Consensus 208 ~g~---~~~A~~~~~~al-~~p~ 226 (307)
T 2ifu_A 208 RAD---YVAAQKCVRESY-SIPG 226 (307)
T ss_dssp TTC---HHHHHHHHHHHT-TSTT
T ss_pred cCC---HHHHHHHHHHHh-CCCC
Confidence 999 999999999999 9886
No 138
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.74 E-value=3.7e-16 Score=103.62 Aligned_cols=119 Identities=21% Similarity=0.279 Sum_probs=109.8
Q ss_pred CCCC-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHH
Q 027158 54 NPLD-PVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAY 132 (227)
Q Consensus 54 ~p~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 132 (227)
+|.. ..++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+.++++++...|.++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 5555 688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHH
Q 027158 133 ADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 133 a~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
|.++...|+ +++|...|+++++.+|+ +...+..++.++..
T Consensus 84 a~~~~~~~~---~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 84 GNAYYKQGD---YDEAIEYYQKALELDPN-NAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHhcC---HHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHh
Confidence 999999999 99999999999999995 88888888777654
No 139
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.74 E-value=4.9e-17 Score=108.51 Aligned_cols=99 Identities=12% Similarity=-0.058 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 027158 60 LHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTL 139 (227)
Q Consensus 60 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 139 (227)
.++.+|..+...|++++|+..|+++++.+|+++.+|+.+|.++...|++++|+.+|++++.++|+++.++..+|.++...
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHhhhcCC
Q 027158 140 GGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 140 g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
|+ +++|+..|+++++++|+
T Consensus 99 g~---~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 99 HN---ANAALASLRAWLLSQPQ 117 (121)
T ss_dssp HH---HHHHHHHHHHHHC----
T ss_pred CC---HHHHHHHHHHHHHhCcC
Confidence 99 99999999999999995
No 140
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.74 E-value=3.6e-18 Score=139.01 Aligned_cols=142 Identities=13% Similarity=0.184 Sum_probs=129.4
Q ss_pred HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC---------------HHHHHHHHH
Q 027158 36 AKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD---------------HDAWRELAE 100 (227)
Q Consensus 36 ~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~---------------~~~~~~la~ 100 (227)
..+++++|+..|+.++...|....++..+|.+++..|++++|+..|++++.++|.+ ..+|.++|.
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 325 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAM 325 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHH
Confidence 34567788888888888889999999999999999999999999999999999998 689999999
Q ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhh
Q 027158 101 IYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQL 180 (227)
Q Consensus 101 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (227)
++...|+|++|+.+|++++.++|+++.+++++|.++..+|+ +++|+..|+++++++|+ +..++..++.++..+++.
T Consensus 326 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~---~~~A~~~~~~al~l~P~-~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 326 CYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE---FESAKGDFEKVLEVNPQ-NKAARLQISMCQKKAKEH 401 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999999996 888999999999888874
Q ss_pred h
Q 027158 181 T 181 (227)
Q Consensus 181 ~ 181 (227)
.
T Consensus 402 ~ 402 (457)
T 1kt0_A 402 N 402 (457)
T ss_dssp H
T ss_pred H
Confidence 4
No 141
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.74 E-value=7.5e-17 Score=127.96 Aligned_cols=157 Identities=12% Similarity=-0.040 Sum_probs=138.8
Q ss_pred CCCChHHHHHHHHHHHHhCC------CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFP------ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL-------DPVLHKRRVAIA 68 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~-------~~~~~~~l~~~~ 68 (227)
..|++++|+..+++++...+ ....++..+|.++...|+++.|+.++.+++...+. ...++..+|.++
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y 192 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNY 192 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 36899999999999998743 24567899999999999999999999999987432 246788999999
Q ss_pred HHcCChHHHHHHHHHHHHHcCC------CHHHHHHHHHHHHHcccHHHHHHHHHHHHh-----hCCCCHHHHHHHHHHHH
Q 027158 69 KAQGNFPTAIEWLNKYLETFMA------DHDAWRELAEIYVSLQMYKQAAFCYEELIL-----SQPTVPLYHLAYADVLY 137 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~la~~~~ 137 (227)
...|++++|+.+|++++++.+. ...++.++|.+|...|++++|+.+|++++. .+|..+.++..+|.++.
T Consensus 193 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 272 (378)
T 3q15_A 193 DDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLC 272 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHH
Confidence 9999999999999999997542 245889999999999999999999999998 77888899999999999
Q ss_pred HcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 138 TLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 138 ~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
..|+ +++|+.++++++++.+.
T Consensus 273 ~~g~---~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 273 KAGQ---TQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HTTC---HHHHHHHHHHHHHHCCT
T ss_pred HCCC---HHHHHHHHHHHHHHHHH
Confidence 9999 99999999999998654
No 142
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.74 E-value=2.8e-16 Score=103.24 Aligned_cols=114 Identities=16% Similarity=0.049 Sum_probs=106.8
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 027158 57 DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVL 136 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 136 (227)
.+..+..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+.++++++..+|.++.++..+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHH
Q 027158 137 YTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCS 174 (227)
Q Consensus 137 ~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (227)
...|+ +++|...|+++++.+|+ +...+..++.+.
T Consensus 83 ~~~~~---~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 116 (118)
T 1elw_A 83 EFLNR---FEEAKRTYEEGLKHEAN-NPQLKEGLQNME 116 (118)
T ss_dssp HHTTC---HHHHHHHHHHHHTTCTT-CHHHHHHHHHHH
T ss_pred HHHhh---HHHHHHHHHHHHHcCCC-CHHHHHHHHHhh
Confidence 99999 99999999999999996 777777666553
No 143
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.74 E-value=2.7e-17 Score=113.32 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=98.9
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHHcCChHHHHHHHHHHHHH----
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL-------DPV-----LHKRRVAIAKAQGNFPTAIEWLNKYLET---- 87 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~-------~~~-----~~~~l~~~~~~~~~~~~A~~~~~~~l~~---- 87 (227)
...+...|..++..|++++|+..|+++++.+|+ +.. +|.++|.++..+|++++|+..|++++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456788999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---cCCCHHHH----HHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHH
Q 027158 88 ---FMADHDAW----RELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130 (227)
Q Consensus 88 ---~p~~~~~~----~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 130 (227)
+|+++.+| +++|.++...|++++|+.+|+++++++|++.....
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 99999999999999999999999999998754433
No 144
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.74 E-value=3.3e-16 Score=109.37 Aligned_cols=120 Identities=15% Similarity=0.001 Sum_probs=112.2
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++...|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+.+|
T Consensus 25 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 104 (166)
T 1a17_A 25 KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDY 104 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHH--HHHHcccHHHHHHHHHHHHhh
Q 027158 82 NKYLETFMADHDAWRELAE--IYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~--~~~~~~~~~~A~~~~~~al~~ 121 (227)
++++..+|.+..++..++. .+...|++++|+.+++++...
T Consensus 105 ~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 105 ETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999999999998855544 488899999999999987654
No 145
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.73 E-value=3.2e-16 Score=105.14 Aligned_cols=116 Identities=13% Similarity=0.005 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC---HHHHHHH
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP---VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD---HDAWREL 98 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~l 98 (227)
..++.+|.++...|++++|+..|++++..+|+++ .+++.+|.++...|++++|+..|++++..+|++ +.+++.+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3566778888888888888888888888888777 678888888888888888888888888888887 7778888
Q ss_pred HHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 027158 99 AEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLG 140 (227)
Q Consensus 99 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 140 (227)
|.++...|++++|+..|++++...|+++.+......+....+
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 888888888888888888888888887776665555544433
No 146
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.73 E-value=3.7e-18 Score=139.55 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=117.9
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYV 103 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~ 103 (227)
...+..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..++++++++|.++.++.++|.+|.
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 44566778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcccHHHHHHHHHHHHhhCCCCHHHHHHHHHH--HHHcCCCCcHHHHHHHHH-----------HHhhhcCC
Q 027158 104 SLQMYKQAAFCYEELILSQPTVPLYHLAYADV--LYTLGGVDNILLAKKYYA-----------STIDLTGG 161 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~--~~~~g~~~~~~~A~~~~~-----------~~~~~~~~ 161 (227)
..|++++|+.+|+++++.+|++..++..++.+ +...|+ +++|+..++ +++.+.|+
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~---~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKA---FERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHH---HCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH---HHHHhccccccchhHhhhhhhhcccccc
Confidence 99999999999999999999999888888888 888888 999999999 88887775
No 147
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.72 E-value=8e-17 Score=104.96 Aligned_cols=104 Identities=18% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC--CHHHHHH
Q 027158 54 NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPT--VPLYHLA 131 (227)
Q Consensus 54 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~ 131 (227)
+|+++.++..+|.++...|++++|+..|+++++.+|.++.++..+|.++...|++++|+.+|++++...|. +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 34444455555555555555555555555555555555555555555555555555555555555555555 5555555
Q ss_pred HHHHHHHc-CCCCcHHHHHHHHHHHhhhcC
Q 027158 132 YADVLYTL-GGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 132 la~~~~~~-g~~~~~~~A~~~~~~~~~~~~ 160 (227)
+|.++... |+ +++|+.++++++...|
T Consensus 82 l~~~~~~~~~~---~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 82 KADALRYIEGK---EVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHTTCSSC---SHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHhCC---HHHHHHHHHHHhhccc
Confidence 55555555 55 5555555555555555
No 148
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.72 E-value=8.3e-17 Score=122.90 Aligned_cols=153 Identities=8% Similarity=-0.122 Sum_probs=134.8
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++.+|++..+++.+|.++...|++++|+..|
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 95 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANL 95 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCH-----HHHH--------------------------HHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHH
Q 027158 82 NKYLETFMADH-----DAWR--------------------------ELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130 (227)
Q Consensus 82 ~~~l~~~p~~~-----~~~~--------------------------~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 130 (227)
+++++++|+++ .++. .++.+ ..|++++|+..+++++..+|.+.....
T Consensus 96 ~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~~~~~~ 173 (281)
T 2c2l_A 96 QRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEGHEDDGHIRA 173 (281)
T ss_dssp HHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCHHHHTH
T ss_pred HHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccchhhhhh
Confidence 99999998652 1221 22222 368999999999999999999988888
Q ss_pred HHHHHHHHc-CCCCcHHHHHHHHHHHhhhc
Q 027158 131 AYADVLYTL-GGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 131 ~la~~~~~~-g~~~~~~~A~~~~~~~~~~~ 159 (227)
.++.++... +. +++|...|.++.+..
T Consensus 174 ~l~~~~~~~~~~---~~~a~~~f~~a~~~~ 200 (281)
T 2c2l_A 174 QQACIEAKHDKY---MADMDELFSQVDEKR 200 (281)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHSSCTT
T ss_pred HHHHHHHHHHHH---HHHHHHHHHhhhccc
Confidence 888777766 66 889999999888743
No 149
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.72 E-value=3.9e-16 Score=114.30 Aligned_cols=152 Identities=12% Similarity=-0.099 Sum_probs=135.5
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCh
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKG----LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA----QGNF 74 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~----~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~----~~~~ 74 (227)
.+++++|+..|+++.+. .++.+++.+|.++.. + ++++|+.+|+++.+ +.++.+++.+|.++.. .+++
T Consensus 31 ~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~ 105 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDV 105 (212)
T ss_dssp HTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCH
T ss_pred CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCH
Confidence 47899999999999875 578999999999998 7 99999999999964 6789999999999998 8999
Q ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-C--CCCcH
Q 027158 75 PTAIEWLNKYLETFMA--DHDAWRELAEIYVS----LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTL-G--GVDNI 145 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~--~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g--~~~~~ 145 (227)
++|+.+|+++++..|. ++.+++.||.+|.. .+++++|+.+|+++... |.++.+++++|.+|... | -..++
T Consensus 106 ~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~ 184 (212)
T 3rjv_A 106 AHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNK 184 (212)
T ss_dssp HHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCH
T ss_pred HHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCH
Confidence 9999999999998873 59999999999999 88999999999999998 77788999999999865 3 12239
Q ss_pred HHHHHHHHHHhhhcC
Q 027158 146 LLAKKYYASTIDLTG 160 (227)
Q Consensus 146 ~~A~~~~~~~~~~~~ 160 (227)
++|+.+|+++.+..+
T Consensus 185 ~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 185 QKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999865
No 150
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.71 E-value=3.4e-16 Score=104.76 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=61.0
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC-------HHHHHH
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD-------HDAWRE 97 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~-------~~~~~~ 97 (227)
..+..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+.++++++...|.+ +.++..
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 4445555555555555555555555555555555555555555555555555555555555555544 555555
Q ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 027158 98 LAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLY 137 (227)
Q Consensus 98 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 137 (227)
+|.++...|++++|+.+|++++...| ++..+..++.+..
T Consensus 85 la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~ 123 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEK 123 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHH
Confidence 55555555555555555555555555 3444444444443
No 151
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.71 E-value=1.5e-16 Score=103.58 Aligned_cols=107 Identities=13% Similarity=0.164 Sum_probs=103.6
Q ss_pred CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCC--CHHHHHH
Q 027158 20 FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA--DHDAWRE 97 (227)
Q Consensus 20 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~--~~~~~~~ 97 (227)
+|+++.++..+|.++...|++++|+..++++++.+|.+..++..+|.++...|++++|+..++++++.+|. ++.++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 68889999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHc-ccHHHHHHHHHHHHhhCCCCH
Q 027158 98 LAEIYVSL-QMYKQAAFCYEELILSQPTVP 126 (227)
Q Consensus 98 la~~~~~~-~~~~~A~~~~~~al~~~p~~~ 126 (227)
+|.++... |++++|+.++++++...|.++
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999999 999999999999999998753
No 152
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.71 E-value=1.2e-16 Score=126.83 Aligned_cols=153 Identities=10% Similarity=0.044 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHhc---CCC---CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC-------H
Q 027158 26 VGRLEGILLEAKGLWAEAEKAYSSLLED---NPL---DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD-------H 92 (227)
Q Consensus 26 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~---~p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~-------~ 92 (227)
.++.+|.++...|++++|+..|++++.. .++ .+.++..+|.++...|++++|+.++++++++.+.. .
T Consensus 105 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 105 FNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 3455899999999999999999999987 233 45889999999999999999999999999986544 4
Q ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh-----c-C
Q 027158 93 DAWRELAEIYVSLQMYKQAAFCYEELILSQPTVP------LYHLAYADVLYTLGGVDNILLAKKYYASTIDL-----T-G 160 (227)
Q Consensus 93 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~-----~-~ 160 (227)
.++..+|.+|...|++++|+.+|++++...|... .++.++|.++...|+ +++|+.+|++++++ + |
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~---~~~A~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQ---YEDAIPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHhhccch
Confidence 5899999999999999999999999998765332 489999999999999 99999999999994 4 5
Q ss_pred CCchhHHHhHHHHHHHHHhhhc
Q 027158 161 GKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
. ...++..++.++..+++..+
T Consensus 262 ~-~~~~~~~l~~~~~~~g~~~~ 282 (383)
T 3ulq_A 262 S-LPQAYFLITQIHYKLGKIDK 282 (383)
T ss_dssp G-HHHHHHHHHHHHHHTTCHHH
T ss_pred h-HHHHHHHHHHHHHHCCCHHH
Confidence 3 67888899999988877554
No 153
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.70 E-value=1.5e-17 Score=130.32 Aligned_cols=137 Identities=13% Similarity=-0.009 Sum_probs=92.9
Q ss_pred CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH-----------------HHHHHHHHHHHHcCChHHHHHHHHHH
Q 027158 22 ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP-----------------VLHKRRVAIAKAQGNFPTAIEWLNKY 84 (227)
Q Consensus 22 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-----------------~~~~~l~~~~~~~~~~~~A~~~~~~~ 84 (227)
.....+..+|..++..|++++|+..|++++...|.+. .++.++|.++...|++++|+..|+++
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3456788999999999999999999999999999876 48999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 85 LETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLY-TLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 85 l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
++++|+++.+|+++|.+|...|++++|+.+|++++.++|++..++..++.+.. ..+. .+.+...|.+++...|.
T Consensus 257 l~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~---~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 257 LTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKAL---YQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999999999999999999999999999998844 4455 78889999999999885
No 154
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.2e-15 Score=104.55 Aligned_cols=118 Identities=13% Similarity=-0.035 Sum_probs=108.8
Q ss_pred hcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Q 027158 52 EDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD---HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLY 128 (227)
Q Consensus 52 ~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 128 (227)
...|.+...+..+|..+...|++++|+..|++++..+|++ ..++..+|.++...|++++|+.++++++..+|+++.+
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 101 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKA 101 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHH
T ss_pred ccchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHH
Confidence 3467889999999999999999999999999999999988 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHH
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLC 173 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (227)
++.+|.++...|+ +++|+..|+++++++|+ +...+..+..+
T Consensus 102 ~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~-~~~~~~~l~~~ 142 (148)
T 2dba_A 102 LYRRSQALEKLGR---LDQAVLDLQRCVSLEPK-NKVFQEALRNI 142 (148)
T ss_dssp HHHHHHHHHHHTC---HHHHHHHHHHHHHHCSS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC---HHHHHHHHHHHHHcCCC-cHHHHHHHHHH
Confidence 9999999999999 99999999999999996 76665554433
No 155
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.70 E-value=2e-16 Score=108.79 Aligned_cols=96 Identities=18% Similarity=0.184 Sum_probs=75.6
Q ss_pred HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc
Q 027158 36 AKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNF----------PTAIEWLNKYLETFMADHDAWRELAEIYVSL 105 (227)
Q Consensus 36 ~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~ 105 (227)
+.+.+++|+..++++++.+|+++.+|+++|.++...+++ ++|+..|+++++++|+++.+|+++|.+|...
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 446678888888888888888888888888888877664 4888888888888888888888888888877
Q ss_pred c-----------cHHHHHHHHHHHHhhCCCCHHHHHH
Q 027158 106 Q-----------MYKQAAFCYEELILSQPTVPLYHLA 131 (227)
Q Consensus 106 ~-----------~~~~A~~~~~~al~~~p~~~~~~~~ 131 (227)
| ++++|+.+|++|+.++|++..++..
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~a 130 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKS 130 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4 7888888888888888877544333
No 156
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.70 E-value=9e-16 Score=102.66 Aligned_cols=119 Identities=13% Similarity=0.043 Sum_probs=108.6
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC-------HHH
Q 027158 56 LDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV-------PLY 128 (227)
Q Consensus 56 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~ 128 (227)
..+..+..+|.++...|++++|+..|++++..+|.++.++..+|.++...|++++|+.++++++...|.+ +.+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999999999999999998877 889
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+..+|.++...|+ +++|+..|+++++..| +......+..+...+.+
T Consensus 82 ~~~la~~~~~~~~---~~~A~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 82 YARIGNSYFKEEK---YKDAIHFYNKSLAEHR--TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHTTC---HHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999988 46667777777766654
No 157
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.68 E-value=2.2e-15 Score=101.00 Aligned_cols=105 Identities=18% Similarity=0.129 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCH---HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC---HHHHHHHH
Q 027158 60 LHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH---DAWRELAEIYVSLQMYKQAAFCYEELILSQPTV---PLYHLAYA 133 (227)
Q Consensus 60 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la 133 (227)
+++.+|.++...|++++|+..|++++..+|+++ .+++.+|.++...|++++|+.+|++++..+|++ +.+++.+|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 467899999999999999999999999999998 899999999999999999999999999999999 88999999
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHH
Q 027158 134 DVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALF 168 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 168 (227)
.++...|+ +++|+..|+++++..|+ ...+..
T Consensus 84 ~~~~~~g~---~~~A~~~~~~~~~~~p~-~~~~~~ 114 (129)
T 2xev_A 84 LSQYGEGK---NTEAQQTLQQVATQYPG-SDAARV 114 (129)
T ss_dssp HHHHHTTC---HHHHHHHHHHHHHHSTT-SHHHHH
T ss_pred HHHHHcCC---HHHHHHHHHHHHHHCCC-ChHHHH
Confidence 99999999 99999999999999996 554433
No 158
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.68 E-value=2e-16 Score=129.34 Aligned_cols=124 Identities=15% Similarity=0.025 Sum_probs=113.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
..|++++|+..|++++..+|++..++..+|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..|
T Consensus 18 ~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~ 97 (477)
T 1wao_1 18 KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDY 97 (477)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHH--HHHcccHHHHHHHHH-----------HHHhhCCCC
Q 027158 82 NKYLETFMADHDAWRELAEI--YVSLQMYKQAAFCYE-----------ELILSQPTV 125 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~--~~~~~~~~~A~~~~~-----------~al~~~p~~ 125 (227)
+++++++|+++.++..++.+ +...|++++|+..++ +++...|..
T Consensus 98 ~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 98 ETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99999999999999999998 889999999999999 887777653
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.68 E-value=3.2e-14 Score=108.99 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=128.8
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC-----
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP------VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD----- 91 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~------~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~----- 91 (227)
....+...+..+...|++++|+..+.++++..|... ..+..+|.++...|++++|+..+++++...+..
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 153 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQ 153 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHH
Confidence 344556678888999999999999999999887654 335678888999999999999999999876544
Q ss_pred -HHHHHHHHHHHHHcccHHHHHHHHHHHH---hhCCCCH----HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC--
Q 027158 92 -HDAWRELAEIYVSLQMYKQAAFCYEELI---LSQPTVP----LYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-- 161 (227)
Q Consensus 92 -~~~~~~la~~~~~~~~~~~A~~~~~~al---~~~p~~~----~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-- 161 (227)
..++..+|.+|...|++++|+.+|++++ ...|.+. .++.++|.++..+|+ +++|+.+|++++++.+.
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~---y~~Al~~~~kal~~~~~~~ 230 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR---YEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhh---HHHHHHHHHHHHHHHHhcC
Confidence 5689999999999999999999999999 5566643 589999999999999 99999999999988652
Q ss_pred ---CchhHHHhHHHHHHHHHh
Q 027158 162 ---KNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 162 ---~~~~~~~~l~~~~~~~~~ 179 (227)
....+++.++.++..+++
T Consensus 231 ~~~~~~~~~~~lg~~y~~~g~ 251 (293)
T 2qfc_A 231 SMALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp BCSSHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHcCC
Confidence 115667788888887775
No 160
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.67 E-value=7.6e-16 Score=121.97 Aligned_cols=117 Identities=16% Similarity=0.066 Sum_probs=78.9
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHc
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLE----------------DNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETF 88 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~----------------~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~ 88 (227)
..+..+|..+...|++++|+..|+++++ .+|.+..++.++|.++...|++++|+.+++++++++
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 4467778888888888888888888887 455555666666666666666666666666666666
Q ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 89 MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 89 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
|+++.+++.+|.+|...|++++|+..|+++++++|++..++..++.++...++
T Consensus 304 p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 304 PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 66666666666666666666666666666666666666666666666665555
No 161
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.67 E-value=1.7e-16 Score=105.08 Aligned_cols=95 Identities=15% Similarity=0.041 Sum_probs=64.2
Q ss_pred cCCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHH
Q 027158 37 KGLWAEAEKAYSSLLED---NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAF 113 (227)
Q Consensus 37 ~~~~~~A~~~~~~~l~~---~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~ 113 (227)
.|++++|+..|+++++. +|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 82 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVE 82 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHH
Confidence 46666777777777776 466667777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHhhCCCCHHHHHH
Q 027158 114 CYEELILSQPTVPLYHLA 131 (227)
Q Consensus 114 ~~~~al~~~p~~~~~~~~ 131 (227)
++++++...|+++.....
T Consensus 83 ~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 83 LLLKIIAETSDDETIQSY 100 (117)
T ss_dssp HHHHHHHHHCCCHHHHHT
T ss_pred HHHHHHHhCCCcHHHHHH
Confidence 777777777776655433
No 162
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.66 E-value=2.6e-16 Score=118.71 Aligned_cols=174 Identities=10% Similarity=-0.097 Sum_probs=141.2
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHH-------HHHHHHcCCHHHHHHHHHHHHhcCCCCH-----------------
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLE-------GILLEAKGLWAEAEKAYSSLLEDNPLDP----------------- 58 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~-------a~~~~~~~~~~~A~~~~~~~l~~~p~~~----------------- 58 (227)
.+++..|...|.++...+|+.+.+|..+ +.++...++..+++..+++.+.+.|...
T Consensus 19 ~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v 98 (282)
T 4f3v_A 19 PMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPV 98 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEEC
T ss_pred CCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCccccccccc
Confidence 5789999999999999999999999999 7888888888888888888888766543
Q ss_pred ----HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC--HHHHHHH
Q 027158 59 ----VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV--PLYHLAY 132 (227)
Q Consensus 59 ----~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l 132 (227)
.+...++.++...|++++|.+.|...+...|.+. ..+.+|.+++..++|++|+.+|+.+....+.. ..+++.+
T Consensus 99 ~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~L 177 (282)
T 4f3v_A 99 TSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAH 177 (282)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHH
Confidence 3445577888889999999999988888888877 88888889999999999999988776543221 3478888
Q ss_pred HHHHHHcCCCCcHHHHHHHHHHHhhhc--CCCchhHHHhHHHHHHHHHhh
Q 027158 133 ADVLYTLGGVDNILLAKKYYASTIDLT--GGKNTKALFGICLCSSAIAQL 180 (227)
Q Consensus 133 a~~~~~~g~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~ 180 (227)
|.++..+|+ +++|+..|++++... |.....+++.+++|...+++.
T Consensus 178 G~al~~LG~---~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 178 GVAAANLAL---FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp HHHHHHTTC---HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHCCC---HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 999999998 999999999888543 422455778888888888863
No 163
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.65 E-value=1e-15 Score=105.30 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=88.1
Q ss_pred HcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccH----------HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 027158 70 AQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMY----------KQAAFCYEELILSQPTVPLYHLAYADVLYTL 139 (227)
Q Consensus 70 ~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 139 (227)
+.+.+++|+..++++++++|+++.+|+++|.++...+++ ++|+..|+++++++|++..+++++|.+|..+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 456689999999999999999999999999999999875 5999999999999999999999999999988
Q ss_pred C-----------CCCcHHHHHHHHHHHhhhcCCCchhHHHhHH
Q 027158 140 G-----------GVDNILLAKKYYASTIDLTGGKNTKALFGIC 171 (227)
Q Consensus 140 g-----------~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~ 171 (227)
| + +++|+.+|+++++++|+ +......+.
T Consensus 94 g~l~P~~~~a~g~---~~eA~~~~~kAl~l~P~-~~~y~~al~ 132 (158)
T 1zu2_A 94 AFLTPDETEAKHN---FDLATQFFQQAVDEQPD-NTHYLKSLE 132 (158)
T ss_dssp HHHCCCHHHHHHH---HHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred cccCcchhhhhcc---HHHHHHHHHHHHHhCCC-CHHHHHHHH
Confidence 5 7 99999999999999996 654444443
No 164
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.65 E-value=2.3e-15 Score=119.39 Aligned_cols=153 Identities=14% Similarity=0.110 Sum_probs=132.5
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC-------H
Q 027158 26 VGRLEGILLEAKGLWAEAEKAYSSLLEDNP------LDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD-------H 92 (227)
Q Consensus 26 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~-------~ 92 (227)
.++.+|..+...|++++|+..|++++...+ ..+.++..+|.++...|+++.|+.++++++++.+.. +
T Consensus 103 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 182 (378)
T 3q15_A 103 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTI 182 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHH
Confidence 567789999999999999999999998732 245789999999999999999999999999986642 4
Q ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh-----hcCC
Q 027158 93 DAWRELAEIYVSLQMYKQAAFCYEELILSQPT------VPLYHLAYADVLYTLGGVDNILLAKKYYASTID-----LTGG 161 (227)
Q Consensus 93 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~-----~~~~ 161 (227)
.++..+|.++...|++++|+.+|++++.+.+. ...++.++|.++...|+ +++|+.+|+++++ .+|.
T Consensus 183 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~---~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 183 QSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGD---DQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHhhCChh
Confidence 57889999999999999999999999986431 24578999999999999 9999999999999 6775
Q ss_pred CchhHHHhHHHHHHHHHhhhc
Q 027158 162 KNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~ 182 (227)
...+++.++.++...++..+
T Consensus 260 -~~~~~~~la~~~~~~g~~~~ 279 (378)
T 3q15_A 260 -LPKVLFGLSWTLCKAGQTQK 279 (378)
T ss_dssp -HHHHHHHHHHHHHHTTCHHH
T ss_pred -HHHHHHHHHHHHHHCCCHHH
Confidence 58888999999988877554
No 165
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.64 E-value=5.8e-15 Score=119.98 Aligned_cols=160 Identities=11% Similarity=-0.045 Sum_probs=134.0
Q ss_pred ChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHc----CCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-H--HHcCChHHH
Q 027158 5 CLDVAKDCIKVLQKQFPESKRVGRLEGILLEAK----GLWAEAEKAYSSLLEDNPLDPVLHKRRVAI-A--KAQGNFPTA 77 (227)
Q Consensus 5 ~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~----~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~-~--~~~~~~~~A 77 (227)
++++|+..|+++....|.....++.+|.++... +++++|+.+|+++. |+++.+++.+|.+ + ...+++++|
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A 270 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQM 270 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHH
Confidence 788999999999999988888888999998766 79999999999988 8899999999998 4 468899999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHcc-----cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-CCCCcHHHHHHH
Q 027158 78 IEWLNKYLETFMADHDAWRELAEIYVSLQ-----MYKQAAFCYEELILSQPTVPLYHLAYADVLYTL-GGVDNILLAKKY 151 (227)
Q Consensus 78 ~~~~~~~l~~~p~~~~~~~~la~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g~~~~~~~A~~~ 151 (227)
+.+|+++.+ +.++.+++.+|.+|. .| ++++|+.+|+++. |.++.+++++|.+|..- |-..++++|+.+
T Consensus 271 ~~~~~~Aa~--~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~ 344 (452)
T 3e4b_A 271 MKYLDNGRA--ADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDH 344 (452)
T ss_dssp HHHHHHHHH--TTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHH
T ss_pred HHHHHHHHH--CCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHH
Confidence 999999875 458999999999998 55 9999999999998 88999999999888762 112239999999
Q ss_pred HHHHhhhcCCCchhHHHhHHHHHHH
Q 027158 152 YASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
|+++.+.. ++.+.+.++.++..
T Consensus 345 ~~~Aa~~g---~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 345 LLTAARNG---QNSADFAIAQLFSQ 366 (452)
T ss_dssp HHHHHTTT---CTTHHHHHHHHHHS
T ss_pred HHHHHhhC---hHHHHHHHHHHHHh
Confidence 99998853 55677777777653
No 166
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.63 E-value=5.6e-16 Score=102.60 Aligned_cols=97 Identities=12% Similarity=-0.001 Sum_probs=87.5
Q ss_pred CCCChHHHHHHHHHHHHh---CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQ---FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAI 78 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~---~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~ 78 (227)
..|++++|+..|++++.. +|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 58889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHH
Q 027158 79 EWLNKYLETFMADHDAWREL 98 (227)
Q Consensus 79 ~~~~~~l~~~p~~~~~~~~l 98 (227)
..|++++...|+++......
T Consensus 82 ~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTH
T ss_pred HHHHHHHHhCCCcHHHHHHH
Confidence 99999999999998865433
No 167
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.63 E-value=5.4e-14 Score=115.23 Aligned_cols=159 Identities=16% Similarity=0.045 Sum_probs=90.6
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-----CCh
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEA----KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ-----GNF 74 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~-----~~~ 74 (227)
+++++|+..|+++... .++.+.+.+|.++.. .+++++|+.+|+++.+. .++.++..+|.++... +++
T Consensus 237 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~ 312 (490)
T 2xm6_A 237 QDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNR 312 (490)
T ss_dssp CCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCH
T ss_pred CCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCH
Confidence 4555555555555543 334555555666555 56666666666665543 3455566666666655 566
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcc---cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCCCcHHH
Q 027158 75 PTAIEWLNKYLETFMADHDAWRELAEIYVSLQ---MYKQAAFCYEELILSQPTVPLYHLAYADVLYT----LGGVDNILL 147 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~~~~ 147 (227)
++|+.+|+++++. .++.+++.+|.+|...| ++++|+.+|++++.. .++.+++.+|.++.. .++ +++
T Consensus 313 ~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~---~~~ 385 (490)
T 2xm6_A 313 EQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKD---EQQ 385 (490)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCC---HHH
T ss_pred HHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCC---HHH
Confidence 6666666666543 34556666666665543 566666666666654 455666666666665 455 666
Q ss_pred HHHHHHHHhhhcCCCchhHHHhHHHHHHH
Q 027158 148 AKKYYASTIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 148 A~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
|+.+|+++++.. ++.+++.++.++..
T Consensus 386 A~~~~~~A~~~~---~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 386 AAIWMRKAAEQG---LSAAQVQLGEIYYY 411 (490)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC---CHHHHHHHHHHHHc
Confidence 666666666542 34455555555543
No 168
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.63 E-value=3.3e-16 Score=130.30 Aligned_cols=153 Identities=9% Similarity=0.071 Sum_probs=142.3
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-ChHHHHHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLEAKG--LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQG-NFPTAIEWLN 82 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~--~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~-~~~~A~~~~~ 82 (227)
+++++..+++++..+|++..+|..++.++...+ ++++++..+.++++.+|.+..+|..++.+....| .++++++++.
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~ 168 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 168 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 899999999999999999999999999999999 7799999999999999999999999999999999 8999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHc--------------ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHH-
Q 027158 83 KYLETFMADHDAWRELAEIYVSL--------------QMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILL- 147 (227)
Q Consensus 83 ~~l~~~p~~~~~~~~la~~~~~~--------------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~- 147 (227)
++++.+|.+..+|..++.++... +.++++++++.+++..+|++..+|+.++.++...+. +.+
T Consensus 169 ~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~---~~~~ 245 (567)
T 1dce_A 169 SLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEP---HDVL 245 (567)
T ss_dssp TTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCC---CSCE
T ss_pred HHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCC---ccce
Confidence 99999999999999999999885 779999999999999999999999999999998887 554
Q ss_pred -----------HHHHHHHHhhhcCC
Q 027158 148 -----------AKKYYASTIDLTGG 161 (227)
Q Consensus 148 -----------A~~~~~~~~~~~~~ 161 (227)
|+..|.+++.++|.
T Consensus 246 ~~~~~~~~~~~~~~~f~~~i~~~~~ 270 (567)
T 1dce_A 246 CCVHVSREEACLSVCFSRPLTVGSR 270 (567)
T ss_dssp EEEEEETTTTEEEEEEEEEECTTBT
T ss_pred eeeeeccCCceEEEEeccceecccc
Confidence 55567777777664
No 169
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.63 E-value=5.9e-15 Score=102.11 Aligned_cols=134 Identities=16% Similarity=0.018 Sum_probs=117.5
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC------
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP------VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD------ 91 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~------~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~------ 91 (227)
..++..+|.++...|++++|+..+++++...+... .++..+|.++...|++++|+.++++++...+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 45788999999999999999999999999754322 578899999999999999999999999987653
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPT------VPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
..++..+|.++...|++++|+.++++++...+. ...++..+|.++...|+ +++|..++++++++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGN---HDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccC---HHHHHHHHHHHHHHHH
Confidence 568899999999999999999999999976432 24578999999999999 9999999999998765
No 170
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.62 E-value=2.5e-14 Score=112.91 Aligned_cols=156 Identities=15% Similarity=0.021 Sum_probs=134.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCchh-----hHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKR-----VGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP------VLHKRRVAIAKA 70 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~-----~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~------~~~~~l~~~~~~ 70 (227)
..|++++|...+++++...|.... ++..+|.++...|++++|...+++++...|... .++..+|.++..
T Consensus 26 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 105 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA 105 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 368999999999999998875432 577889999999999999999999998755332 346789999999
Q ss_pred cCChHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHH
Q 027158 71 QGNFPTAIEWLNKYLETF--------MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV-----PLYHLAYADVLY 137 (227)
Q Consensus 71 ~~~~~~A~~~~~~~l~~~--------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~ 137 (227)
.|++++|+..+++++... |....++..+|.++...|++++|..++++++...|.. ..++..+|.++.
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHH
Confidence 999999999999999876 3345678889999999999999999999999887752 467889999999
Q ss_pred HcCCCCcHHHHHHHHHHHhhhcC
Q 027158 138 TLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 138 ~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
..|+ +++|...+++++.+.+
T Consensus 186 ~~g~---~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 186 ARGD---LDNARSQLNRLENLLG 205 (373)
T ss_dssp HHTC---HHHHHHHHHHHHHHHT
T ss_pred HcCC---HHHHHHHHHHHHHHHh
Confidence 9999 9999999999998754
No 171
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.62 E-value=1.7e-14 Score=114.17 Aligned_cols=120 Identities=11% Similarity=-0.056 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHH----------------HcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 58 PVLHKRRVAIAKAQGNFPTAIEWLNKYLE----------------TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 58 ~~~~~~l~~~~~~~~~~~~A~~~~~~~l~----------------~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
...+..+|..+...|++++|+..|+++++ .+|.+..+|.++|.++...|++++|+.++++++..
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999 77888899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhh
Q 027158 122 QPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 122 ~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (227)
+|+++.+++.+|.++..+|+ +++|+..|+++++++|+ +..++..+..+...+++..
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~---~~eA~~~l~~Al~l~P~-~~~~~~~l~~~~~~~~~~~ 358 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKE---YDQALADLKKAQEIAPE-DKAIQAELLKVKQKIKAQK 358 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 99999999999999996 8888888888888777643
No 172
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.61 E-value=1.1e-15 Score=119.78 Aligned_cols=127 Identities=14% Similarity=0.068 Sum_probs=82.1
Q ss_pred CCCCChHHHHHHHHHHHHhCCCch-----------------hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 027158 1 MDCQCLDVAKDCIKVLQKQFPESK-----------------RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKR 63 (227)
Q Consensus 1 l~~~~~~~A~~~~~~~~~~~p~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~ 63 (227)
+..|++++|+..|++++...|++. .++..+|.++...|++++|+..|++++..+|++..+++.
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 269 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFR 269 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 357899999999999999999876 488999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHH-HHcccHHHHHHHHHHHHhhCCCCHH
Q 027158 64 RVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIY-VSLQMYKQAAFCYEELILSQPTVPL 127 (227)
Q Consensus 64 l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~-~~~~~~~~A~~~~~~al~~~p~~~~ 127 (227)
+|.++...|++++|+..|+++++++|+++.++..++.+. ...+..+.+...|.+++...|.++.
T Consensus 270 lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 270 RGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp HHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999999999999999999994 4567788999999999999997754
No 173
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.61 E-value=5.4e-13 Score=109.32 Aligned_cols=159 Identities=10% Similarity=0.049 Sum_probs=112.2
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCh
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEA----KGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA----QGNF 74 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~----~~~~ 74 (227)
.+++++|+..|+++.+. .++.+++.+|.++.. .+++++|+.+|+++.+. .++.++..+|.++.. .+++
T Consensus 56 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~ 131 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDK 131 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 46777788877777765 466777777877777 77788888888777764 467777777777777 6777
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCCCcHH
Q 027158 75 PTAIEWLNKYLETFMADHDAWRELAEIYVS----LQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT----LGGVDNIL 146 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~~~ 146 (227)
++|+.+|+++.+. .++.+++.+|.+|.. .+++++|+.+|+++... .++.++..+|.+|.. .++ ++
T Consensus 132 ~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~---~~ 204 (490)
T 2xm6_A 132 AESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYMYSRGLGVERN---DA 204 (490)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCC---HH
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCCCcC---HH
Confidence 7777777777653 567777777777776 67777777777777764 467777777777776 566 77
Q ss_pred HHHHHHHHHhhhcCCCchhHHHhHHHHHH
Q 027158 147 LAKKYYASTIDLTGGKNTKALFGICLCSS 175 (227)
Q Consensus 147 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~ 175 (227)
+|+.+|+++.+.. ++.+++.++.++.
T Consensus 205 ~A~~~~~~a~~~~---~~~a~~~lg~~y~ 230 (490)
T 2xm6_A 205 ISAQWYRKSATSG---DELGQLHLADMYY 230 (490)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC---CHHHHHHHHHHHH
Confidence 7777777776643 3445555555544
No 174
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.59 E-value=4.2e-14 Score=108.37 Aligned_cols=148 Identities=14% Similarity=0.064 Sum_probs=121.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC------HHHHH
Q 027158 29 LEGILLEAKGLWAEAEKAYSSLLEDNPLDPV------LHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD------HDAWR 96 (227)
Q Consensus 29 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~------~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~ 96 (227)
..+..+...|++++|...+++++...+..+. .+..+|.++...|++++|+.+|++++...+.. ..++.
T Consensus 80 ~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 80 DQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHH
Confidence 3467788899999999999999998877665 23358888888999999999999999975543 34799
Q ss_pred HHHHHHHHcccHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC-----ch
Q 027158 97 ELAEIYVSLQMYKQAAFCYEELILSQ-------PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK-----NT 164 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~-----~~ 164 (227)
.+|.+|...|++++|+.+|++++... +....++.++|.++..+|+ +++|+.++++++++.+.. ..
T Consensus 160 ~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~---y~~A~~~~~~al~~~~~~~~~~~~~ 236 (293)
T 3u3w_A 160 AIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR---YEESLYQVNKAIEISCRINSMALIG 236 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTTBCTTHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 99999999999999999999999521 2224588999999999999 999999999999987541 15
Q ss_pred hHHHhHHHHHHHHHh
Q 027158 165 KALFGICLCSSAIAQ 179 (227)
Q Consensus 165 ~~~~~l~~~~~~~~~ 179 (227)
.+++.++.++..+++
T Consensus 237 ~~~~~lg~~~~~~g~ 251 (293)
T 3u3w_A 237 QLYYQRGECLRKLEY 251 (293)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCC
Confidence 677778888777663
No 175
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.58 E-value=1.2e-13 Score=112.18 Aligned_cols=158 Identities=15% Similarity=0.090 Sum_probs=133.6
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc----CChHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLEAKG---LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ----GNFPTAI 78 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~----~~~~~A~ 78 (227)
.+++..+++.+... ++.+++.+|.++...| ++++|+.+|+++....|.....++.+|.+|... +++++|+
T Consensus 161 ~~~a~~~~~~a~~~---~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~ 237 (452)
T 3e4b_A 161 LDDVERICKAALNT---TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQ 237 (452)
T ss_dssp HHHHHHHHHHHTTT---CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 34444455544443 4459999999999999 999999999999999999999989999999765 7999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHH-H--HHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--CCcHHHHHHHHH
Q 027158 79 EWLNKYLETFMADHDAWRELAEI-Y--VSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG--VDNILLAKKYYA 153 (227)
Q Consensus 79 ~~~~~~l~~~p~~~~~~~~la~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~--~~~~~~A~~~~~ 153 (227)
.+|+++. |.++.+++++|.+ + ...+++++|+.+|+++... .++.+++++|.+|. .|. ..++++|+.+|+
T Consensus 238 ~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~ 311 (452)
T 3e4b_A 238 ALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFE 311 (452)
T ss_dssp HHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHH
T ss_pred HHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHH
Confidence 9999998 8999999999999 4 4689999999999999865 48999999999998 550 112999999999
Q ss_pred HHhhhcCCCchhHHHhHHHHHHH
Q 027158 154 STIDLTGGKNTKALFGICLCSSA 176 (227)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~ 176 (227)
++. ++ ++.+++.++.++..
T Consensus 312 ~Aa---~g-~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 312 KAV---GR-EVAADYYLGQIYRR 330 (452)
T ss_dssp TTT---TT-CHHHHHHHHHHHHT
T ss_pred HHh---CC-CHHHHHHHHHHHHC
Confidence 999 64 88899999888765
No 176
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.57 E-value=9e-14 Score=106.19 Aligned_cols=164 Identities=15% Similarity=0.050 Sum_probs=135.2
Q ss_pred HHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027158 9 AKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNP--LDPVLHKRRVAIAKAQGNFPTAIEWLNKYLE 86 (227)
Q Consensus 9 A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~ 86 (227)
|+..+++.+...+.+...+..+|.++...|++++|+..+.+.+..+| ++..++...+.++...|+.+.|.+.++++.+
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 45667777766656677778999999999999999999999999987 7889999999999999999999999999999
Q ss_pred HcCC----CHHHHHHH--HHHHHHcc--cHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Q 027158 87 TFMA----DHDAWREL--AEIYVSLQ--MYKQAAFCYEELILSQPT--VPLYHLAYADVLYTLGGVDNILLAKKYYASTI 156 (227)
Q Consensus 87 ~~p~----~~~~~~~l--a~~~~~~~--~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~ 156 (227)
.+|+ +......+ |.+.+..| ++.+|...|+++....|+ .+..+++ ++..+|+ +++|...++.++
T Consensus 165 ~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~---~~eAe~~L~~l~ 238 (310)
T 3mv2_B 165 AIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRN---IAEAQGIVELLL 238 (310)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTC---HHHHHHHHHHHH
T ss_pred cCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCC---HHHHHHHHHHHH
Confidence 9983 23344444 44466666 999999999999888886 3334444 8999999 999999999888
Q ss_pred hh----------cCCCchhHHHhHHHHHHHHHh
Q 027158 157 DL----------TGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 157 ~~----------~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+. +|+ ++.++.+++.+...+++
T Consensus 239 ~~~p~~~~k~~~~p~-~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 239 SDYYSVEQKENAVLY-KPTFLANQITLALMQGL 270 (310)
T ss_dssp SHHHHTTTCHHHHSS-HHHHHHHHHHHHHHTTC
T ss_pred HhcccccccccCCCC-CHHHHHHHHHHHHHhCh
Confidence 76 474 88898898888887763
No 177
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.57 E-value=3e-15 Score=112.95 Aligned_cols=132 Identities=11% Similarity=-0.079 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCC-C-HHHHHHHHHHHH
Q 027158 26 VGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA-D-HDAWRELAEIYV 103 (227)
Q Consensus 26 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~-~-~~~~~~la~~~~ 103 (227)
+...++.++...|++++|.+.|..++...|++. +.+.+|.++...+++++|+..|+.+....+. . ..+++.+|.++.
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 344578899999999999999999999999888 9999999999999999999999977654211 1 358999999999
Q ss_pred HcccHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 104 SLQMYKQAAFCYEELILSQ--PT-VPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al~~~--p~-~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
..|++++|+.+|++++... |. .+.+++.+|.++..+|+ .++|...|++++..+|+
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr---~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN---ESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHSCC
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhcCCc
Confidence 9999999999999998654 55 56799999999999999 99999999999999994
No 178
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.56 E-value=6.1e-14 Score=92.25 Aligned_cols=100 Identities=13% Similarity=0.071 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 027158 76 TAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYAST 155 (227)
Q Consensus 76 ~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~ 155 (227)
.|+..|+++++.+|.++.++..+|.++...|++++|+.+|++++..+|.++.++..+|.++...|+ +++|+..|+++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~---~~~A~~~~~~a 79 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGD---RAGARQAWESG 79 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCC---HHHHHHHHHHH
Confidence 466677777777777777777777777777777777777777777777777777777777777777 77777777777
Q ss_pred hhhcCC-CchhHHHhHHHHHHHHH
Q 027158 156 IDLTGG-KNTKALFGICLCSSAIA 178 (227)
Q Consensus 156 ~~~~~~-~~~~~~~~l~~~~~~~~ 178 (227)
+++.|. .+......+......++
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHHhc
Confidence 777664 23333334444444433
No 179
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.56 E-value=2.6e-13 Score=105.50 Aligned_cols=137 Identities=13% Similarity=-0.005 Sum_probs=131.0
Q ss_pred ChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHc-C-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChH-------
Q 027158 5 CLDVAKDCIKVLQKQFPESKRVGRLEGILLEAK-G-LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFP------- 75 (227)
Q Consensus 5 ~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~------- 75 (227)
.+++++..++.++..+|++..+|..++.++... + ++++++.++.+++..+|.+..+|..++.+....|.++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~ 183 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQW 183 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhH
Confidence 589999999999999999999999999999998 8 8999999999999999999999999999999988888
Q ss_pred -HHHHHHHHHHHHcCCCHHHHHHHHHHHHHccc-------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 76 -TAIEWLNKYLETFMADHDAWRELAEIYVSLQM-------YKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 76 -~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~-------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
++++++.++++.+|.+..+|...+.++...+. ++++++++.+++..+|++..+|..+..++...|.
T Consensus 184 ~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~ 257 (349)
T 3q7a_A 184 GSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSL 257 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999886 8999999999999999999999999999888876
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.54 E-value=1.7e-13 Score=90.05 Aligned_cols=96 Identities=13% Similarity=0.041 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 42 EAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 42 ~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
.|+..|+++++.+|+++.++..+|.++...|++++|+..|++++..+|.++.+|..+|.++...|++++|+.+|++++..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46777788888888888888888888888888888888888888888888888888888888888888888888888877
Q ss_pred CCC--CHHHHHHHHHHHH
Q 027158 122 QPT--VPLYHLAYADVLY 137 (227)
Q Consensus 122 ~p~--~~~~~~~la~~~~ 137 (227)
.|. +......+...+.
T Consensus 83 ~~~~~~~~~~~~l~~~l~ 100 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLR 100 (115)
T ss_dssp HHHHTCHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHH
Confidence 663 3333344443333
No 181
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.53 E-value=2.3e-13 Score=85.27 Aligned_cols=84 Identities=20% Similarity=0.238 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 027158 57 DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVL 136 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 136 (227)
++.++..+|.++...|++++|+.+|++++..+|.++.++..+|.++...|++++|+.+|++++..+|+++.++..+|.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 34566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHcC
Q 027158 137 YTLG 140 (227)
Q Consensus 137 ~~~g 140 (227)
...|
T Consensus 88 ~~~g 91 (91)
T 1na3_A 88 QKQG 91 (91)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 5543
No 182
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.51 E-value=1e-12 Score=94.57 Aligned_cols=142 Identities=15% Similarity=0.084 Sum_probs=111.7
Q ss_pred HHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHcccH
Q 027158 35 EAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLET------FMADHDAWRELAEIYVSLQMY 108 (227)
Q Consensus 35 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~------~p~~~~~~~~la~~~~~~~~~ 108 (227)
+..|++++|...++.+....+....++..+|.++...|++++|+..+++++.+ .|....++..+|.++...|++
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 82 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW 82 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 56799999999665555533467799999999999999999999999999994 344567899999999999999
Q ss_pred HHHHHHHHHHHhh---CCCC----HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC-Cc----hhHHHhHHHHHHH
Q 027158 109 KQAAFCYEELILS---QPTV----PLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG-KN----TKALFGICLCSSA 176 (227)
Q Consensus 109 ~~A~~~~~~al~~---~p~~----~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~ 176 (227)
++|+.++++++.. .+++ ..++..+|.++...|+ +++|..++++++...+. .+ ...+..++.++..
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 159 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGD---LAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQ 159 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999999999987 4433 4578999999999999 99999999999987542 12 2234566666665
Q ss_pred HHh
Q 027158 177 IAQ 179 (227)
Q Consensus 177 ~~~ 179 (227)
.++
T Consensus 160 ~g~ 162 (203)
T 3gw4_A 160 EKN 162 (203)
T ss_dssp TTC
T ss_pred CcC
Confidence 554
No 183
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.51 E-value=8.7e-13 Score=100.76 Aligned_cols=153 Identities=10% Similarity=-0.035 Sum_probs=129.4
Q ss_pred CCChHHHHHHHHHHHHhCC--CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC----CHHHHHHH--HHHHHHcC--
Q 027158 3 CQCLDVAKDCIKVLQKQFP--ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL----DPVLHKRR--VAIAKAQG-- 72 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p--~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~----~~~~~~~l--~~~~~~~~-- 72 (227)
.|++++|+..+.+.+..+| .+..+....+.++...|+.+.|.+.++++.+.+|+ +..+...+ +.+.+..|
T Consensus 113 ~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~ 192 (310)
T 3mv2_B 113 LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKE 192 (310)
T ss_dssp HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCc
Confidence 4899999999999999887 88999999999999999999999999999999983 22333444 44466666
Q ss_pred ChHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHcccHHHHHHHHHHHHhh----------CCCCHHHHHHHHHHHHHcC
Q 027158 73 NFPTAIEWLNKYLETFMA--DHDAWRELAEIYVSLQMYKQAAFCYEELILS----------QPTVPLYHLAYADVLYTLG 140 (227)
Q Consensus 73 ~~~~A~~~~~~~l~~~p~--~~~~~~~la~~~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~la~~~~~~g 140 (227)
++.+|...|+++.+..|+ .+..+++ ++..+|++++|...++.+++. +|+++.++.+++.+...+|
T Consensus 193 ~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg 269 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG 269 (310)
T ss_dssp TTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC
Confidence 999999999999888887 3334444 899999999999999988776 5889999999999999988
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCch
Q 027158 141 GVDNILLAKKYYASTIDLTGGKNT 164 (227)
Q Consensus 141 ~~~~~~~A~~~~~~~~~~~~~~~~ 164 (227)
+ +|.+++.++.+..|+ ++
T Consensus 270 k-----~a~~l~~qL~~~~P~-hp 287 (310)
T 3mv2_B 270 L-----DTEDLTNQLVKLDHE-HA 287 (310)
T ss_dssp C-----TTHHHHHHHHHTTCC-CH
T ss_pred h-----HHHHHHHHHHHhCCC-Ch
Confidence 6 788999999999996 54
No 184
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.8e-14 Score=93.87 Aligned_cols=84 Identities=13% Similarity=0.074 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHH
Q 027158 58 PVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV------PLYHLA 131 (227)
Q Consensus 58 ~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 131 (227)
+.++..+|.++...|++++|+..|++++..+|.++.+|.++|.++...|++++|+..|++++..+|++ ..++..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 34555666666666666666666666666666666666666666666666666666666666666665 555666
Q ss_pred HHHHHHHcCC
Q 027158 132 YADVLYTLGG 141 (227)
Q Consensus 132 la~~~~~~g~ 141 (227)
+|.++...|+
T Consensus 84 ~~~~~~~~~~ 93 (111)
T 2l6j_A 84 LELAQGAVGS 93 (111)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 6666666555
No 185
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.50 E-value=1e-12 Score=103.63 Aligned_cols=154 Identities=16% Similarity=0.107 Sum_probs=127.3
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH-----HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCH------H
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP-----VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADH------D 93 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~------~ 93 (227)
.+...+|.++...|++++|...+++++...|.+. .++..+|.++...|++++|+..+++++...|... .
T Consensus 15 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALW 94 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4567889999999999999999999999877553 2678899999999999999999999999876542 3
Q ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCC---
Q 027158 94 AWRELAEIYVSLQMYKQAAFCYEELILSQ--------PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGK--- 162 (227)
Q Consensus 94 ~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~--- 162 (227)
++..+|.++...|++++|+.++++++... |....++..+|.++...|+ +++|..++++++...+..
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~~~~~~~ 171 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWAR---LDEAEASARSGIEVLSSYQPQ 171 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHTTTSCGG
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHhhccCcH
Confidence 47889999999999999999999999764 3345678889999999999 999999999999987741
Q ss_pred -chhHHHhHHHHHHHHHhhh
Q 027158 163 -NTKALFGICLCSSAIAQLT 181 (227)
Q Consensus 163 -~~~~~~~l~~~~~~~~~~~ 181 (227)
....+..++.++...++..
T Consensus 172 ~~~~~~~~la~~~~~~g~~~ 191 (373)
T 1hz4_A 172 QQLQCLAMLIQCSLARGDLD 191 (373)
T ss_dssp GGHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHH
Confidence 2345566666666666544
No 186
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.6e-14 Score=94.06 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=88.5
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC------HHHHH
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD------HDAWR 96 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~ 96 (227)
+...+..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++.++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999999 88999
Q ss_pred HHHHHHHHcccHHHHHHHHHH
Q 027158 97 ELAEIYVSLQMYKQAAFCYEE 117 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~ 117 (227)
.+|.++...|+++.|+..+++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 999999999988887766544
No 187
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.49 E-value=3e-13 Score=93.38 Aligned_cols=123 Identities=15% Similarity=-0.081 Sum_probs=106.1
Q ss_pred CCCChHHHHHHHHHHHHhCCCch------hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK------RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLD------PVLHKRRVAIAK 69 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~------~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~l~~~~~ 69 (227)
..|++++|+..+++++...+... .++..+|.++...|++++|+.++++++...+.. ..++..+|.++.
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 100 (164)
T 3ro3_A 21 LLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 100 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 36899999999999998866432 478899999999999999999999999875432 567889999999
Q ss_pred HcCChHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Q 027158 70 AQGNFPTAIEWLNKYLETFMAD------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 70 ~~~~~~~A~~~~~~~l~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 124 (227)
..|++++|+.++++++...+.. +.++..+|.++...|++++|+.++++++.+...
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875332 567899999999999999999999999976543
No 188
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.48 E-value=7.1e-13 Score=82.96 Aligned_cols=85 Identities=22% Similarity=0.154 Sum_probs=80.9
Q ss_pred CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 027158 22 ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEI 101 (227)
Q Consensus 22 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~ 101 (227)
.++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|+++++.+|.++.++..+|.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcc
Q 027158 102 YVSLQ 106 (227)
Q Consensus 102 ~~~~~ 106 (227)
+...|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87754
No 189
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.7e-12 Score=104.33 Aligned_cols=156 Identities=15% Similarity=0.042 Sum_probs=132.4
Q ss_pred CCChHHHHHHHHHHHHhCCCchh-----------------hHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------H
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKR-----------------VGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP------V 59 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~------~ 59 (227)
.|+|++|++.|.++++..|.... ++..+|.+|...|++++|.+++.+++...+... .
T Consensus 17 ~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T 4b4t_Q 17 EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKV 96 (434)
T ss_dssp HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 58999999999999999885432 477899999999999999999999998755432 3
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHcCC------CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC------CCCHH
Q 027158 60 LHKRRVAIAKAQGNFPTAIEWLNKYLETFMA------DHDAWRELAEIYVSLQMYKQAAFCYEELILSQ------PTVPL 127 (227)
Q Consensus 60 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~~~ 127 (227)
+...++.++...|++++|+.++++++...+. ...++..+|.++...|+|++|+.++++++... |....
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~ 176 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVD 176 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHH
Confidence 4556777888899999999999999987543 26789999999999999999999999998652 23356
Q ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 128 YHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 128 ~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
++..++.++...|+ +++|...+++++...+.
T Consensus 177 ~~~~~~~~~~~~~~---~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 177 VHLLESKVYHKLRN---LAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc---HHHHHHHHHHHHHHhhc
Confidence 89999999999999 99999999999988654
No 190
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.44 E-value=1.9e-12 Score=83.01 Aligned_cols=71 Identities=18% Similarity=0.061 Sum_probs=45.7
Q ss_pred cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 88 FMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 88 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+|+++.+|+.+|.++...|++++|+.+|++++..+|+++.++..+|.++...|+ +++|+..|++++++.|.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~---~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDR---TDDAIDTYAQGIEVARE 73 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhhhc
Confidence 466666666666666666666666666666666666666666666666666666 66666666666666553
No 191
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.42 E-value=1.8e-12 Score=83.13 Aligned_cols=70 Identities=19% Similarity=0.175 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Q 027158 54 NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQP 123 (227)
Q Consensus 54 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 123 (227)
+|+++.+++.+|.++...|++++|+..|+++++.+|+++.+|..+|.+|...|++++|+..|++++.+.|
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 5777777777777777777777777777777777777777777777777777777777777777776654
No 192
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.41 E-value=9.2e-13 Score=84.04 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 027158 62 KRRVAIAKAQGNFPTAIEWLNKYLETFMADHD-AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLG 140 (227)
Q Consensus 62 ~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~-~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 140 (227)
+..|.++...|++++|+..|+++++.+|.++. ++..+|.++...|++++|+.+|++++..+|+++.++.. +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 34566666666666666666666666666666 66666666666666666666666666666666665543 3
Q ss_pred CCCcHHHHHHHHHHHhhhcCC
Q 027158 141 GVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 141 ~~~~~~~A~~~~~~~~~~~~~ 161 (227)
. +.+++..|+++...+|+
T Consensus 76 ~---~~~a~~~~~~~~~~~p~ 93 (99)
T 2kc7_A 76 M---VMDILNFYNKDMYNQLE 93 (99)
T ss_dssp H---HHHHHHHHCCTTHHHHC
T ss_pred H---HHHHHHHHHHHhccCcc
Confidence 3 66666666666666664
No 193
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.40 E-value=1.8e-11 Score=108.54 Aligned_cols=62 Identities=21% Similarity=0.172 Sum_probs=43.5
Q ss_pred CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHc
Q 027158 22 ESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETF 88 (227)
Q Consensus 22 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~ 88 (227)
+.+.+|..+|.++...|++++|+..|.++ +++..+..+|.++...|++++|+++|..+.+..
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 45667777777777777777777777664 566777777777777777777777776655443
No 194
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.40 E-value=1.1e-12 Score=83.61 Aligned_cols=91 Identities=13% Similarity=0.025 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc
Q 027158 27 GRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPV-LHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSL 105 (227)
Q Consensus 27 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~-~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~ 105 (227)
.+..|.++...|++++|+..|+++++.+|+++. ++..+|.++...|++++|+..|+++++.+|+++.++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 356788999999999999999999999999998 99999999999999999999999999999999888744
Q ss_pred ccHHHHHHHHHHHHhhCCCC
Q 027158 106 QMYKQAAFCYEELILSQPTV 125 (227)
Q Consensus 106 ~~~~~A~~~~~~al~~~p~~ 125 (227)
+.+.+++.+|++++..+|++
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHHhccCccc
Confidence 67788888888888777765
No 195
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.38 E-value=2.3e-11 Score=82.66 Aligned_cols=110 Identities=18% Similarity=0.085 Sum_probs=64.6
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHH
Q 027158 39 LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVS----LQMYKQAAFC 114 (227)
Q Consensus 39 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~ 114 (227)
++++|+.+|+++.+...... . +|.+|...+.+++|+.+|+++.+. .++.+++++|.+|.. .+++++|+.+
T Consensus 10 d~~~A~~~~~~aa~~g~~~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~ 83 (138)
T 1klx_A 10 DLKKAIQYYVKACELNEMFG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQY 83 (138)
T ss_dssp HHHHHHHHHHHHHHTTCTTH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCHhh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 45566666666665542222 2 566665555566666666666554 456666666666665 5666666666
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHH----cCCCCcHHHHHHHHHHHhhhc
Q 027158 115 YEELILSQPTVPLYHLAYADVLYT----LGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 115 ~~~al~~~p~~~~~~~~la~~~~~----~g~~~~~~~A~~~~~~~~~~~ 159 (227)
|+++.+. .++.+.+++|.+|.. .++ +++|+.+|+++.+..
T Consensus 84 ~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d---~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 84 YSKACGL--NDQDGCLILGYKQYAGKGVVKN---EKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCC---HHHHHHHHHHHHHTT
T ss_pred HHHHHcC--CCHHHHHHHHHHHHCCCCCCcC---HHHHHHHHHHHHHCC
Confidence 6666554 455666666666665 455 666666666666653
No 196
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.34 E-value=1.7e-10 Score=89.83 Aligned_cols=144 Identities=13% Similarity=0.016 Sum_probs=114.2
Q ss_pred HHHHHhCCCchhhH--HHHHHHHHHcCC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc---C-ChHHHHHHHHH-
Q 027158 14 KVLQKQFPESKRVG--RLEGILLEAKGL---WAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQ---G-NFPTAIEWLNK- 83 (227)
Q Consensus 14 ~~~~~~~p~~~~~~--~~~a~~~~~~~~---~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~---~-~~~~A~~~~~~- 83 (227)
+++....|.++.++ ++.|..+...++ ..+|+.+|+++++.+|+++.++..++.++... + .......-+.+
T Consensus 184 ~r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a 263 (372)
T 3ly7_A 184 ETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTE 263 (372)
T ss_dssp HHHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHH
Confidence 34555667776664 566777776654 47899999999999999999999888877532 1 11111122222
Q ss_pred -----HHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 84 -----YLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 84 -----~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
++..+|.++.++..++..+...|++++|+..+++|+.++|+ ..++..+|.++...|+ +++|++.|.+++.+
T Consensus 264 ~~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~---~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 264 IDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGM---NREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTC---HHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCC---HHHHHHHHHHHHhc
Confidence 22457999999999999999999999999999999999974 7788999999999999 99999999999999
Q ss_pred cCC
Q 027158 159 TGG 161 (227)
Q Consensus 159 ~~~ 161 (227)
+|.
T Consensus 340 ~P~ 342 (372)
T 3ly7_A 340 RPG 342 (372)
T ss_dssp SCS
T ss_pred CCC
Confidence 996
No 197
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.34 E-value=5e-11 Score=80.99 Aligned_cols=120 Identities=11% Similarity=-0.133 Sum_probs=104.8
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCChHHHHH
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA----QGNFPTAIE 79 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~----~~~~~~A~~ 79 (227)
+++++|+..|+++.+..+. .+. +|.++...+..++|+.+|+++.+. .++.+++.+|.+|.. .+++++|+.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~--~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM--FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT--THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH--hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 3689999999999988743 333 999999999999999999999986 689999999999999 899999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 027158 80 WLNKYLETFMADHDAWRELAEIYVS----LQMYKQAAFCYEELILSQPTVPLYHLAYA 133 (227)
Q Consensus 80 ~~~~~l~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la 133 (227)
+|+++.+. .++.++++||.+|.. .+++++|+.+|+++.+.. ++.+...++
T Consensus 83 ~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 83 YYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 99999876 689999999999999 899999999999999874 455555544
No 198
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.34 E-value=7.1e-11 Score=99.96 Aligned_cols=162 Identities=8% Similarity=-0.105 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHH-HHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 027158 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAE-KAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYL 85 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~-~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l 85 (227)
+.....|++++...|.++.+|+..+..+...|+.++|. ..|++++...|.+..+|..++......|++++|...|++++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999988897 99999999999999899999999999999999999999998
Q ss_pred HHc-----------CC-----------CHHHHHHHHHHHHHcccHHHHHHHHHHHHhh-CCCCHHHHHHHHHHHHHc-CC
Q 027158 86 ETF-----------MA-----------DHDAWRELAEIYVSLQMYKQAAFCYEELILS-QPTVPLYHLAYADVLYTL-GG 141 (227)
Q Consensus 86 ~~~-----------p~-----------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~-g~ 141 (227)
... |. .+.+|...+.+..+.|..+.|..+|.+|++. .+.....+...|.+.+.. ++
T Consensus 406 ~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d 485 (679)
T 4e6h_A 406 DRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKD 485 (679)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCC
Confidence 752 43 3457888888888889999999999999887 445566677777666665 35
Q ss_pred CCcHHHHHHHHHHHhhhcCCCchhHHHhHHH
Q 027158 142 VDNILLAKKYYASTIDLTGGKNTKALFGICL 172 (227)
Q Consensus 142 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~ 172 (227)
.+.|...|+.+++..|+ .+..+..++.
T Consensus 486 ---~e~Ar~ife~~Lk~~p~-~~~~w~~y~~ 512 (679)
T 4e6h_A 486 ---TKTACKVLELGLKYFAT-DGEYINKYLD 512 (679)
T ss_dssp ---CHHHHHHHHHHHHHHTT-CHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHCCC-chHHHHHHHH
Confidence 78899999999998885 6555544443
No 199
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.33 E-value=2.8e-10 Score=96.34 Aligned_cols=155 Identities=17% Similarity=0.067 Sum_probs=137.8
Q ss_pred CChHHHH-HHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc-----------CCC-----------CHHH
Q 027158 4 QCLDVAK-DCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLED-----------NPL-----------DPVL 60 (227)
Q Consensus 4 ~~~~~A~-~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~-----------~p~-----------~~~~ 60 (227)
|+.++|. .+|++++...|.+..+++..+......|+++.|..+|++++.. .|. ...+
T Consensus 357 ~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~v 436 (679)
T 4e6h_A 357 NTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYV 436 (679)
T ss_dssp SCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHH
Confidence 5667786 9999999999999999999999999999999999999999975 253 3457
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHcc-cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 027158 61 HKRRVAIAKAQGNFPTAIEWLNKYLET-FMADHDAWRELAEIYVSLQ-MYKQAAFCYEELILSQPTVPLYHLAYADVLYT 138 (227)
Q Consensus 61 ~~~l~~~~~~~~~~~~A~~~~~~~l~~-~p~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 138 (227)
|...+....+.|..+.|...|.++++. .+.....|...|.+....+ +++.|..+|+.+++..|+++..+..++.....
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 889999999999999999999999998 5556788888888877765 49999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHhhhcCC
Q 027158 139 LGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 139 ~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.|+ .+.|...|++++...|+
T Consensus 517 ~~~---~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 517 VNE---ESQVKSLFESSIDKISD 536 (679)
T ss_dssp HTC---HHHHHHHHHHHTTTSSS
T ss_pred CCC---HHHHHHHHHHHHHhcCC
Confidence 999 99999999999999873
No 200
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.31 E-value=1.4e-11 Score=100.61 Aligned_cols=126 Identities=10% Similarity=-0.001 Sum_probs=107.1
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHH-----cCCC---HHH
Q 027158 31 GILLEAKGLWAEAEKAYSSLLED-----NPLD---PVLHKRRVAIAKAQGNFPTAIEWLNKYLET-----FMAD---HDA 94 (227)
Q Consensus 31 a~~~~~~~~~~~A~~~~~~~l~~-----~p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~-----~p~~---~~~ 94 (227)
+..+..+|+|++|+..++++++. .|++ ...+.++|.+|..+|++++|+.++++++++ .|++ ...
T Consensus 316 a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 395 (490)
T 3n71_A 316 IDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMA 395 (490)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 44567889999999999999986 4454 467899999999999999999999999976 3455 457
Q ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhh-----CCCCHH---HHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 95 WRELAEIYVSLQMYKQAAFCYEELILS-----QPTVPL---YHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 95 ~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~~~---~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
+.+||.+|..+|++++|+.+|++|+.+ .|++|. ....++.++..+|. +++|...|.++.+..
T Consensus 396 l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~---~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 396 VMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM---FRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 899999999999999999999999964 577765 46788889999999 999999999987643
No 201
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.30 E-value=6.2e-12 Score=100.21 Aligned_cols=154 Identities=12% Similarity=0.012 Sum_probs=60.7
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHH
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNK 83 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 83 (227)
|++++|+.+++.+++..++ +.+...++.+|.+.|++.++.++++ .| +..+|..+|..+...|++++|..+|.+
T Consensus 75 g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y~Klg~l~e~e~f~~-----~p-n~~a~~~IGd~~~~~g~yeeA~~~Y~~ 147 (449)
T 1b89_A 75 GNWEELVKYLQMARKKARE-SYVETELIFALAKTNRLAELEEFIN-----GP-NNAHIQQVGDRCYDEKMYDAAKLLYNN 147 (449)
T ss_dssp -----------------------------------CHHHHTTTTT-----CC-----------------CTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcc-chhHHHHHHHHHHhCCHHHHHHHHc-----CC-cHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4555555555555443221 3333333333333344333333321 12 123455555555555555555555554
Q ss_pred HHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh--------------------------hCCCCHHHHHHHHHHHH
Q 027158 84 YLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL--------------------------SQPTVPLYHLAYADVLY 137 (227)
Q Consensus 84 ~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~--------------------------~~p~~~~~~~~la~~~~ 137 (227)
+ ..|..+|.++.+.|+|++|+++++++.. +. .++.-...+...|.
T Consensus 148 a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~-~~ad~l~~lv~~Ye 218 (449)
T 1b89_A 148 V--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIV-VHADELEELINYYQ 218 (449)
T ss_dssp T--------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTT-TCHHHHHHHHHHHH
T ss_pred h--------hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHH-hCHhhHHHHHHHHH
Confidence 3 2445555555555555555555555410 00 22223334567788
Q ss_pred HcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHH
Q 027158 138 TLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAI 177 (227)
Q Consensus 138 ~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (227)
+.|. +++|+..+++++.+++. ....+..++.++...
T Consensus 219 k~G~---~eEai~lLe~aL~le~a-h~~~ftel~il~~ky 254 (449)
T 1b89_A 219 DRGY---FEELITMLEAALGLERA-HMGMFTELAILYSKF 254 (449)
T ss_dssp HTTC---HHHHHHHHHHHTTSTTC-CHHHHHHHHHHHHTT
T ss_pred HCCC---HHHHHHHHHHHhCCcHH-HHHHHHHHHHHHHhc
Confidence 8888 99999999999999984 777888887777653
No 202
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.26 E-value=3.5e-11 Score=98.24 Aligned_cols=121 Identities=11% Similarity=0.050 Sum_probs=103.0
Q ss_pred CCCChHHHHHHHHHHHHh-----CCCch---hhHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQ-----FPESK---RVGRLEGILLEAKGLWAEAEKAYSSLLED-----NPLD---PVLHKRRV 65 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~-----~p~~~---~~~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~---~~~~~~l~ 65 (227)
..|+|++|+.++++++.. .|+++ ..+..+|.+|..+|+|++|+.++++++.. .|++ ...+.++|
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 479999999999999985 34554 56788999999999999999999999986 4444 46789999
Q ss_pred HHHHHcCChHHHHHHHHHHHHH-----cCCCH---HHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Q 027158 66 AIAKAQGNFPTAIEWLNKYLET-----FMADH---DAWRELAEIYVSLQMYKQAAFCYEELILSQ 122 (227)
Q Consensus 66 ~~~~~~~~~~~A~~~~~~~l~~-----~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 122 (227)
.+|..+|++++|+.+|++++++ .|+++ .....++.++..++.+++|...|.++.+..
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999976 46664 466789999999999999999999987543
No 203
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.26 E-value=5.9e-10 Score=83.55 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHHHc---------------------CCHHHHHHHHHHHHhc-------------
Q 027158 8 VAKDCIKVLQKQFPESKRVGRLEGILLEAK---------------------GLWAEAEKAYSSLLED------------- 53 (227)
Q Consensus 8 ~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~---------------------~~~~~A~~~~~~~l~~------------- 53 (227)
-.+.+++.++..+|++.......+..|..- .++..|..+|.++...
T Consensus 50 ~~Lk~~e~Ll~~~P~~~~Ll~~~a~ly~~Ya~afV~~~a~~~~~~~~~~~~~~~~RA~~Ly~ra~~y~~raL~~~~~~~~ 129 (301)
T 3u64_A 50 LVLKVYEALHLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFT 129 (301)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHTHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTHH
T ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhcCchhhcchhhHhhhhhhHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 356788888889998887766655444221 1234555555544332
Q ss_pred ------------------CCCCHHHHHHHHHHHHH---c--C------ChHHHHHHHHHHHHHcCC--CHHHHHHHHHHH
Q 027158 54 ------------------NPLDPVLHKRRVAIAKA---Q--G------NFPTAIEWLNKYLETFMA--DHDAWRELAEIY 102 (227)
Q Consensus 54 ------------------~p~~~~~~~~l~~~~~~---~--~------~~~~A~~~~~~~l~~~p~--~~~~~~~la~~~ 102 (227)
+|+++++++-.|.+... . | ....|...++++++++|+ +..+|..+|.+|
T Consensus 130 ~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY 209 (301)
T 3u64_A 130 REVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFY 209 (301)
T ss_dssp HHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHH
Confidence 34456666656554433 1 3 367999999999999999 677999999999
Q ss_pred HHc-----ccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH-cCCCCcHHHHHHHHHHHhhhcCC
Q 027158 103 VSL-----QMYKQAAFCYEELILSQPTV-PLYHLAYADVLYT-LGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 103 ~~~-----~~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
... |+.++|..+|++++.++|+. ...++.+|..+.. .|+ ++.|..++++++...|.
T Consensus 210 ~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd---~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 210 AAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN---RAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC---HHHHHHHHHHHHHCCGG
T ss_pred HhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC---HHHHHHHHHHHHcCCCC
Confidence 995 99999999999999999975 9999999999988 499 99999999999998885
No 204
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.26 E-value=4.8e-11 Score=95.17 Aligned_cols=162 Identities=10% Similarity=-0.018 Sum_probs=121.0
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
+.|+|++|..+|.++ ..+..+|.++...|++++|++.+.++ .++.+|...+.++...|+++.|..+.
T Consensus 134 ~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~ 200 (449)
T 1b89_A 134 DEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCG 200 (449)
T ss_dssp ---CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTT
T ss_pred HcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHH
Confidence 457777777777765 35667788888888888888888877 36777777778888888888886666
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC-
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTG- 160 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~- 160 (227)
... .. +++-...+..+|...|.+++|+.++++++..++.+...+..+|.++.+-. +++..++++.|...+.+.|
T Consensus 201 l~L-~~---~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~-p~k~~ehl~~~~~~ini~k~ 275 (449)
T 1b89_A 201 LHI-VV---HADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK-PQKMREHLELFWSRVNIPKV 275 (449)
T ss_dssp TTT-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC-HHHHHHHHHHHSTTSCHHHH
T ss_pred HHH-Hh---CHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHhcCcHH
Confidence 642 23 33444567888999999999999999999999999999999998887654 3347888888887777776
Q ss_pred ----CCchhHHHhHHHHHHHHHhhhc
Q 027158 161 ----GKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 161 ----~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
. +...|..+...+....++..
T Consensus 276 ~~~~~-~~~~w~e~~~ly~~~~e~d~ 300 (449)
T 1b89_A 276 LRAAE-QAHLWAELVFLYDKYEEYDN 300 (449)
T ss_dssp HHHHH-TTTCHHHHHHHHHHTTCHHH
T ss_pred HHHHH-HHHHHHHHHHHHHhhchHHH
Confidence 4 66777788888877666543
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.24 E-value=2.6e-10 Score=88.74 Aligned_cols=123 Identities=14% Similarity=0.097 Sum_probs=101.5
Q ss_pred CChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCC-------HHHHH-HHHH--HHHhcCCCCHHHHHHHHHHHHHcCC
Q 027158 4 QCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGL-------WAEAE-KAYS--SLLEDNPLDPVLHKRRVAIAKAQGN 73 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~-------~~~A~-~~~~--~~l~~~p~~~~~~~~l~~~~~~~~~ 73 (227)
..+.+|+.+|+++++.+|+++.++..++.++..... ...++ ..+. .++..+|.++.++..++..+...|+
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd 292 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGK 292 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCC
Confidence 346889999999999999999999988888753211 11111 1222 2345689999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHH
Q 027158 74 FPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPL 127 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 127 (227)
+++|+..+++++.++|+ ..+|..+|.++...|++++|++.|++|+.++|..+.
T Consensus 293 ~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 293 TDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 99999999999999974 778899999999999999999999999999998754
No 206
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.24 E-value=3.8e-10 Score=100.37 Aligned_cols=156 Identities=10% Similarity=-0.021 Sum_probs=108.9
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-------------------------
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL------------------------- 56 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~------------------------- 56 (227)
+.|++++|+..|.++ +++..+...|.++...|++++|+++|..+.+..++
T Consensus 1117 ~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~ 1191 (1630)
T 1xi4_A 1117 QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFIN 1191 (1630)
T ss_pred hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHh
Confidence 467888888888664 67778888888888888888888888776654422
Q ss_pred --CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC-----------
Q 027158 57 --DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQP----------- 123 (227)
Q Consensus 57 --~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p----------- 123 (227)
+...+..+|..+...|++++|..+|.++ ..|..+|.++...|++++|++++++|....+
T Consensus 1192 ~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~ 1263 (1630)
T 1xi4_A 1192 GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDG 1263 (1630)
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhh
Confidence 2234556777777888888888888774 4677777777777777777777776644332
Q ss_pred --------------CCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHH
Q 027158 124 --------------TVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCS 174 (227)
Q Consensus 124 --------------~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (227)
.++..+..++..|...|. +++|+..++.++.++|. +...+..++.++
T Consensus 1264 ~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~---feEAI~LlE~aL~Lera-H~gmftELaiLy 1324 (1630)
T 1xi4_A 1264 KEFRLAQMCGLHIVVHADELEELINYYQDRGY---FEELITMLEAALGLERA-HMGMFTELAILY 1324 (1630)
T ss_pred hHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCC---HHHHHHHHHHHhccChh-HhHHHHHHHHHH
Confidence 244456677777777777 88888888777777764 544443333333
No 207
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.21 E-value=2.6e-10 Score=71.84 Aligned_cols=71 Identities=11% Similarity=-0.039 Sum_probs=47.1
Q ss_pred CCCCHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Q 027158 54 NPLDPVLHKRRVAIAKAQGN---FPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 54 ~p~~~~~~~~l~~~~~~~~~---~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 124 (227)
+|+++.++..+|.++...++ .++|...++++++.+|+++.+++.+|..++..|+|++|+.++++++..+|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 46666666666666654443 566666666666666666666666666666666666666666666666665
No 208
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=3.9e-10 Score=90.47 Aligned_cols=156 Identities=13% Similarity=0.007 Sum_probs=126.7
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH-----------------HHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDP-----------------VLHKRRVAIAKAQGNFPTAIEWLNKYLE 86 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-----------------~~~~~l~~~~~~~~~~~~A~~~~~~~l~ 86 (227)
|......|..+...|++++|++.|.++++..|... .++..+|.+|...|++++|+.++.+++.
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 55667788889999999999999999999887642 3578999999999999999999999999
Q ss_pred HcCCCHH------HHHHHHHHHHHcccHHHHHHHHHHHHhhCC------CCHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Q 027158 87 TFMADHD------AWRELAEIYVSLQMYKQAAFCYEELILSQP------TVPLYHLAYADVLYTLGGVDNILLAKKYYAS 154 (227)
Q Consensus 87 ~~p~~~~------~~~~la~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~ 154 (227)
..+.... +...++.++...|+++.|+.++++++...+ ....++..+|.++...|+ +.+|...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~l~~ 160 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQ---YKDSLALIND 160 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTC---HHHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccC---hHHHHHHHHH
Confidence 8776532 456678888889999999999999996543 235688999999999999 9999999999
Q ss_pred HhhhcCC-----CchhHHHhHHHHHHHHHhhhc
Q 027158 155 TIDLTGG-----KNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 155 ~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~ 182 (227)
++..... .....+..++.++..++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
T 4b4t_Q 161 LLREFKKLDDKPSLVDVHLLESKVYHKLRNLAK 193 (434)
T ss_dssp HHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhcccchhHHHHHHHHHHHHHHhCcHHH
Confidence 9876332 234566677777776666543
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.12 E-value=1.4e-09 Score=73.96 Aligned_cols=87 Identities=16% Similarity=0.058 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHcccHHHHHHHHH
Q 027158 42 EAEKAYSSLLEDNPLDPVLHKRRVAIAKAQG---NFPTAIEWLNKYLETF-M-ADHDAWRELAEIYVSLQMYKQAAFCYE 116 (227)
Q Consensus 42 ~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~---~~~~A~~~~~~~l~~~-p-~~~~~~~~la~~~~~~~~~~~A~~~~~ 116 (227)
.+...|.+.+..+|.+..+.+.+|.++.+.+ +.++++..++..++.+ | .+.++++++|..+++.|+|++|..+++
T Consensus 16 ~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~ 95 (152)
T 1pc2_A 16 KFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVR 95 (152)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 3444444444444455555555555555544 3335555555555554 3 234455555555555555555555555
Q ss_pred HHHhhCCCCHHH
Q 027158 117 ELILSQPTVPLY 128 (227)
Q Consensus 117 ~al~~~p~~~~~ 128 (227)
++++.+|++..+
T Consensus 96 ~lL~ieP~n~QA 107 (152)
T 1pc2_A 96 GLLQTEPQNNQA 107 (152)
T ss_dssp HHHHHCTTCHHH
T ss_pred HHHhcCCCCHHH
Confidence 555555554444
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.09 E-value=1.1e-09 Score=68.87 Aligned_cols=71 Identities=10% Similarity=-0.036 Sum_probs=67.5
Q ss_pred cCCCHHHHHHHHHHHHHccc---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 88 FMADHDAWRELAEIYVSLQM---YKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 88 ~p~~~~~~~~la~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
+|+++..+..+|.+++..++ .++|...+++++..+|+++.+++.+|..++..|+ +++|+.+|+++++.+|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~---y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFR---FQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCC
Confidence 68999999999999987665 7999999999999999999999999999999999 99999999999999996
No 211
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.05 E-value=5e-09 Score=71.23 Aligned_cols=102 Identities=17% Similarity=0.004 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcc---cHHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCCCcHHHH
Q 027158 74 FPTAIEWLNKYLETFMADHDAWRELAEIYVSLQ---MYKQAAFCYEELILSQ-P-TVPLYHLAYADVLYTLGGVDNILLA 148 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~la~~~~~~g~~~~~~~A 148 (227)
...+...|.+.+..+|.+..+.+++|.++.+.+ +.++++.+++.+++.+ | .+..+++.+|..++++|+ |++|
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~---Y~~A 90 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKE---YEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSC---HHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccC---HHHH
Confidence 356777888888888999999999999999987 7789999999999998 7 568899999999999999 9999
Q ss_pred HHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 149 KKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
+.+++++++..|+ +..+......+...+.+
T Consensus 91 ~~y~~~lL~ieP~-n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 91 LKYVRGLLQTEPQ-NNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHHHHCTT-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC-CHHHHHHHHHHHHHHHH
Confidence 9999999999996 88777776666666543
No 212
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.03 E-value=6.5e-09 Score=66.86 Aligned_cols=73 Identities=12% Similarity=0.024 Sum_probs=30.5
Q ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHH
Q 027158 95 WRELAEIYVSLQMYKQAAFCYEELILSQ-------PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKAL 167 (227)
Q Consensus 95 ~~~la~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~ 167 (227)
++.+|..++..|+|..|+.+|+.|+... +..+.++..+|.+++++|+ ++.|+.++++++++.|+ +..+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~---~~~A~~~~~~al~l~P~-~~~~~ 83 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGD---LDKALLLTKKLLELDPE-HQRAN 83 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTT-CHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccC---HHHHHHHHHHHHhcCCC-CHHHH
Confidence 3344444444444444444444444321 1223344444444444444 44444444444444443 33333
Q ss_pred HhHH
Q 027158 168 FGIC 171 (227)
Q Consensus 168 ~~l~ 171 (227)
.++.
T Consensus 84 ~n~~ 87 (104)
T 2v5f_A 84 GNLK 87 (104)
T ss_dssp HHHH
T ss_pred hhHH
Confidence 3333
No 213
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.99 E-value=1.4e-08 Score=65.21 Aligned_cols=78 Identities=9% Similarity=0.028 Sum_probs=70.7
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHH
Q 027158 57 DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETF-------MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYH 129 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~-------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 129 (227)
++.-.+.+|..++..|++..|+.+|+.+++.. +..+.++..+|.+++..|+++.|+.++++++...|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 56678899999999999999999999999974 23578999999999999999999999999999999999998
Q ss_pred HHHHH
Q 027158 130 LAYAD 134 (227)
Q Consensus 130 ~~la~ 134 (227)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88763
No 214
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.96 E-value=4.4e-09 Score=84.57 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=76.8
Q ss_pred HcCCHHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHH-----cCCC---HHHHHHHH
Q 027158 36 AKGLWAEAEKAYSSLLED-----NPLDP---VLHKRRVAIAKAQGNFPTAIEWLNKYLET-----FMAD---HDAWRELA 99 (227)
Q Consensus 36 ~~~~~~~A~~~~~~~l~~-----~p~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~l~~-----~p~~---~~~~~~la 99 (227)
..|+|++|+..++++++. .|+++ ..+.++|.+|..+|++++|+.++++++.+ .|++ +..+.+||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 458899999999999885 45554 66788999999999999999999999876 3444 45788999
Q ss_pred HHHHHcccHHHHHHHHHHHHhh-----CCCCHHHH
Q 027158 100 EIYVSLQMYKQAAFCYEELILS-----QPTVPLYH 129 (227)
Q Consensus 100 ~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~ 129 (227)
.+|..+|++++|+.+|++|+.+ .|++|.+.
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 9999999999999999999964 57776653
No 215
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.94 E-value=8.7e-08 Score=78.57 Aligned_cols=144 Identities=11% Similarity=-0.029 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-------------------
Q 027158 7 DVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAI------------------- 67 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~------------------- 67 (227)
.....+|++++...|..+.+|+..+..+...|+.+.|...|++++.. |.+...+...+..
T Consensus 196 ~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~ 274 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEA 274 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhcc
Confidence 45678999999999999999999999999999999999999999999 9887666544432
Q ss_pred ---------------------HHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcc-cHHHHHHHHHHHHhhCCCC
Q 027158 68 ---------------------AKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQ-MYKQAAFCYEELILSQPTV 125 (227)
Q Consensus 68 ---------------------~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~~p~~ 125 (227)
..+.+..+.|...|.++ ...+.....|...|.+-...+ +++.|...|+.+++..|+.
T Consensus 275 ~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~ 353 (493)
T 2uy1_A 275 ESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS 353 (493)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC
T ss_pred chhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC
Confidence 12244556666666666 322224455555555555544 4667777777777666666
Q ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 027158 126 PLYHLAYADVLYTLGGVDNILLAKKYYAST 155 (227)
Q Consensus 126 ~~~~~~la~~~~~~g~~~~~~~A~~~~~~~ 155 (227)
+..+..++......|+ .+.|...|+++
T Consensus 354 ~~~~~~yid~e~~~~~---~~~aR~l~er~ 380 (493)
T 2uy1_A 354 TLLKEEFFLFLLRIGD---EENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHHHHHHTC---HHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHH
Confidence 6666666666666666 66666666665
No 216
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.94 E-value=8.8e-09 Score=77.27 Aligned_cols=107 Identities=11% Similarity=-0.049 Sum_probs=92.3
Q ss_pred HhCCCchhhHHHHHHHHHH-----cC------CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHc-----CChHHHHH
Q 027158 18 KQFPESKRVGRLEGILLEA-----KG------LWAEAEKAYSSLLEDNPL--DPVLHKRRVAIAKAQ-----GNFPTAIE 79 (227)
Q Consensus 18 ~~~p~~~~~~~~~a~~~~~-----~~------~~~~A~~~~~~~l~~~p~--~~~~~~~l~~~~~~~-----~~~~~A~~ 79 (227)
...|+++..++..|..... .| ....|...++++++++|+ +..+|..+|.+|... |+.++|..
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~ 225 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHT 225 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHH
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHH
Confidence 3456777777777766543 12 367899999999999999 677999999999995 99999999
Q ss_pred HHHHHHHHcCCC-HHHHHHHHHHHHH-cccHHHHHHHHHHHHhhCCC
Q 027158 80 WLNKYLETFMAD-HDAWRELAEIYVS-LQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 80 ~~~~~l~~~p~~-~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~ 124 (227)
+|+++++++|+. ...++..|..+.. .|+++.|..++++++..+|.
T Consensus 226 ~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 226 AFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 999999999975 9999999999988 49999999999999998876
No 217
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.91 E-value=1.4e-08 Score=81.73 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=64.6
Q ss_pred HHHcCCHHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHH-----cCCC---HHHHHH
Q 027158 34 LEAKGLWAEAEKAYSSLLED-----NPLDP---VLHKRRVAIAKAQGNFPTAIEWLNKYLET-----FMAD---HDAWRE 97 (227)
Q Consensus 34 ~~~~~~~~~A~~~~~~~l~~-----~p~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~l~~-----~p~~---~~~~~~ 97 (227)
+..+|++++|+..++++++. .|+++ .++.++|.+|..+|++++|+.++++++.+ .|++ ...+.+
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~n 376 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMK 376 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHH
Confidence 44567777777777777764 34443 55677777777777777777777777765 2344 346677
Q ss_pred HHHHHHHcccHHHHHHHHHHHHhh-----CCCCHHH
Q 027158 98 LAEIYVSLQMYKQAAFCYEELILS-----QPTVPLY 128 (227)
Q Consensus 98 la~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 128 (227)
||.+|..+|++++|+.++++|+.+ .|++|.+
T Consensus 377 La~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 412 (429)
T 3qwp_A 377 VGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLI 412 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 777777777777777777777743 4666543
No 218
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.91 E-value=2.1e-06 Score=70.54 Aligned_cols=155 Identities=8% Similarity=-0.104 Sum_probs=126.6
Q ss_pred CCCChHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHc---------CCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQF-PESKRVGRLEGILLEAK---------GLWAEAEKAYSSLLEDN-PLDPVLHKRRVAIAKA 70 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~-p~~~~~~~~~a~~~~~~---------~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~ 70 (227)
..|++++|+.+|+++.... +.+...+..+-.++... +..+.|..+|+++.... +-+...|..+...+.+
T Consensus 38 k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~ 117 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVA 117 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 4689999999999999875 23455555555555443 34788999999988763 3367889999999999
Q ss_pred cCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCCCcHHHH
Q 027158 71 QGNFPTAIEWLNKYLETF-MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ-PTVPLYHLAYADVLYTLGGVDNILLA 148 (227)
Q Consensus 71 ~~~~~~A~~~~~~~l~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~~~~A 148 (227)
.|++++|..+|++..... +.+...|..+...|.+.|++++|..+|++..... ..+...+..+-.++.+.|+ .++|
T Consensus 118 ~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~---~d~A 194 (501)
T 4g26_A 118 KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKN---ADKV 194 (501)
T ss_dssp HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTC---HHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCC---HHHH
Confidence 999999999999988753 3468889999999999999999999999998654 2357778889999999999 9999
Q ss_pred HHHHHHHhhhc
Q 027158 149 KKYYASTIDLT 159 (227)
Q Consensus 149 ~~~~~~~~~~~ 159 (227)
...+++..+..
T Consensus 195 ~~ll~~Mr~~g 205 (501)
T 4g26_A 195 YKTLQRLRDLV 205 (501)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 99999987754
No 219
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.78 E-value=2e-08 Score=80.82 Aligned_cols=87 Identities=10% Similarity=-0.009 Sum_probs=76.0
Q ss_pred HcCChHHHHHHHHHHHHH-----cCCC---HHHHHHHHHHHHHcccHHHHHHHHHHHHhh-----CCCCHH---HHHHHH
Q 027158 70 AQGNFPTAIEWLNKYLET-----FMAD---HDAWRELAEIYVSLQMYKQAAFCYEELILS-----QPTVPL---YHLAYA 133 (227)
Q Consensus 70 ~~~~~~~A~~~~~~~l~~-----~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~~~---~~~~la 133 (227)
..|++++|+..+++++++ .|++ ...+.++|.+|..+|+|++|+.++++++.+ .|++|. .+.++|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 468899999999999986 4555 457889999999999999999999999964 466654 689999
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 134 DVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
.+|..+|+ +++|..+|++++++.
T Consensus 390 ~~~~~qg~---~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 390 RLYMGLEN---KAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHTTC---HHHHHHHHHHHHHHH
T ss_pred HHHHhccC---HHHHHHHHHHHHHHH
Confidence 99999999 999999999999873
No 220
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.73 E-value=3.6e-08 Score=79.34 Aligned_cols=101 Identities=15% Similarity=-0.061 Sum_probs=81.7
Q ss_pred CCChHHHHHHHHHHHHh-----CCCch---hhHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHH
Q 027158 3 CQCLDVAKDCIKVLQKQ-----FPESK---RVGRLEGILLEAKGLWAEAEKAYSSLLED-----NPLD---PVLHKRRVA 66 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~-----~p~~~---~~~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~---~~~~~~l~~ 66 (227)
.|++++|+..+++++.. .|+++ ..+..+|.+|..+|+|++|+.++++++.. .|++ ...++++|.
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 58999999999999975 34554 55778899999999999999999999986 3444 467899999
Q ss_pred HHHHcCChHHHHHHHHHHHHH-----cCCCHH---HHHHHHHHHH
Q 027158 67 IAKAQGNFPTAIEWLNKYLET-----FMADHD---AWRELAEIYV 103 (227)
Q Consensus 67 ~~~~~~~~~~A~~~~~~~l~~-----~p~~~~---~~~~la~~~~ 103 (227)
+|..+|++++|+.++++++++ .|+++. +..+|+.+..
T Consensus 380 ~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 380 LQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999986 466655 3445555543
No 221
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.65 E-value=4.4e-06 Score=68.47 Aligned_cols=146 Identities=11% Similarity=0.047 Sum_probs=118.3
Q ss_pred CCChHHHHHHHHHHHHhCCCchhhHHHHHHH----------------------------------------HHHcCCHHH
Q 027158 3 CQCLDVAKDCIKVLQKQFPESKRVGRLEGIL----------------------------------------LEAKGLWAE 42 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~----------------------------------------~~~~~~~~~ 42 (227)
.|+.++|..+|++++.. |.+...+...+.. ..+.++.+.
T Consensus 226 ~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~ 304 (493)
T 2uy1_A 226 IGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLEL 304 (493)
T ss_dssp TTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred cCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHH
Confidence 57888999999999988 8776555443332 223567889
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 43 AEKAYSSLLEDNPLDPVLHKRRVAIAKAQG-NFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 43 A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~-~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
|...|.++ ...+....+|...+.+....+ +.+.|...|+.+++..|+++..|...+......|+.+.|..+|+++
T Consensus 305 AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~--- 380 (493)
T 2uy1_A 305 FRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL--- 380 (493)
T ss_dssp HHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS---
T ss_pred HHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH---
Confidence 99999999 433345677777777776666 6999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 122 QPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 122 ~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
+.....|......-...|+ .+.+...++++++
T Consensus 381 -~k~~~lw~~~~~fE~~~G~---~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 381 -EKTSRMWDSMIEYEFMVGS---MELFRELVDQKMD 412 (493)
T ss_dssp -CCBHHHHHHHHHHHHHHSC---HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHH
Confidence 4567888888888888899 9999888888885
No 222
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.60 E-value=7.5e-07 Score=58.41 Aligned_cols=87 Identities=16% Similarity=0.028 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHH---HHHHHHHHHHHc-C-CCHHHHHHHHHHHHHcccHHHHHHHHH
Q 027158 42 EAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPT---AIEWLNKYLETF-M-ADHDAWRELAEIYVSLQMYKQAAFCYE 116 (227)
Q Consensus 42 ~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~---A~~~~~~~l~~~-p-~~~~~~~~la~~~~~~~~~~~A~~~~~ 116 (227)
.+...|.+.+..++.+..+.+.+|.++.+..+... ++.+++..+..+ | ..-+..+.||..+++.|+|++|..+++
T Consensus 19 ~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~ 98 (126)
T 1nzn_A 19 KFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVR 98 (126)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34444444444444555555555555555444333 555555554443 2 233445555555555555555555555
Q ss_pred HHHhhCCCCHHH
Q 027158 117 ELILSQPTVPLY 128 (227)
Q Consensus 117 ~al~~~p~~~~~ 128 (227)
.+++..|++..+
T Consensus 99 ~lL~~eP~n~QA 110 (126)
T 1nzn_A 99 GLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHCTTCHHH
T ss_pred HHHHhCCCCHHH
Confidence 555555555444
No 223
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.57 E-value=4.4e-06 Score=56.09 Aligned_cols=119 Identities=12% Similarity=0.098 Sum_probs=87.6
Q ss_pred cCCCCHHHHHHHHHHHHHcCCh------HHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHcccHHHHHHHHHHH
Q 027158 53 DNPLDPVLHKRRVAIAKAQGNF------PTAIEWLNKYLETFMAD--------HDAWRELAEIYVSLQMYKQAAFCYEEL 118 (227)
Q Consensus 53 ~~p~~~~~~~~l~~~~~~~~~~------~~A~~~~~~~l~~~p~~--------~~~~~~la~~~~~~~~~~~A~~~~~~a 118 (227)
..|++++.|..........|+. ++-+..|++++..-|.. ...|...|.. ...++.+.|...|+.+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 4678888888888777777877 77778888888776653 3466677755 5568888888888888
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHH
Q 027158 119 ILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAI 177 (227)
Q Consensus 119 l~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (227)
+..+.....+|...|..-.+.|+ ...|...+.+++.+.|. +.-+...++...+.
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgn---l~kARkILg~AiG~~~k--~~~~le~a~~nl~~ 140 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGN---VKKSKQLLQKAVERGAV--PLEMLEIALRNLNL 140 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTTCB--CHHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHhccCCC--cHHHHHHHHHhhhc
Confidence 88777778888888888888888 99999999999888873 33444444444433
No 224
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.51 E-value=1.6e-05 Score=65.20 Aligned_cols=151 Identities=9% Similarity=-0.052 Sum_probs=120.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHc-CCCHHHH
Q 027158 27 GRLEGILLEAKGLWAEAEKAYSSLLEDN-PLDPVLHKRRVAIAKAQGN---------FPTAIEWLNKYLETF-MADHDAW 95 (227)
Q Consensus 27 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~~~~---------~~~A~~~~~~~l~~~-p~~~~~~ 95 (227)
+...-..+.+.|+.++|+.+|+++.+.. +-+...|..+..++...+. .++|...|++..... +.+...|
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty 108 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF 108 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH
Confidence 4455577788999999999999998863 3467778888777766543 678999999887653 2368889
Q ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHH
Q 027158 96 RELAEIYVSLQMYKQAAFCYEELILSQ-PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCS 174 (227)
Q Consensus 96 ~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (227)
..+...|.+.|++++|..+|++..... +.+...+..+-..+...|+ .++|...|.+..+..-.++...+..++.++
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~---~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~ 185 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGD---ADKAYEVDAHMVESEVVPEEPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCC---HHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 999999999999999999999988653 3467788888899999999 999999999998765444677777787777
Q ss_pred HHHHhh
Q 027158 175 SAIAQL 180 (227)
Q Consensus 175 ~~~~~~ 180 (227)
.+.++.
T Consensus 186 ~~~g~~ 191 (501)
T 4g26_A 186 MDTKNA 191 (501)
T ss_dssp HHTTCH
T ss_pred hhCCCH
Confidence 776653
No 225
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.50 E-value=3.5e-06 Score=55.24 Aligned_cols=101 Identities=17% Similarity=0.007 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHH---HHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCCCcHHH
Q 027158 73 NFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQ---AAFCYEELILSQ-P-TVPLYHLAYADVLYTLGGVDNILL 147 (227)
Q Consensus 73 ~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~~~~~la~~~~~~g~~~~~~~ 147 (227)
....+...|.+.+..++.+..+.+++|.++.+..+... ++.+++..+..+ | ..-..++.+|..++++|+ |.+
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~---Y~~ 92 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKE---YEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTC---HHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhh---HHH
Confidence 34566777888888888999999999999999876665 999999999876 5 456789999999999999 999
Q ss_pred HHHHHHHHhhhcCCCchhHHHhHHHHHHHH
Q 027158 148 AKKYYASTIDLTGGKNTKALFGICLCSSAI 177 (227)
Q Consensus 148 A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (227)
|..+++.+++..|+ +..+..-...+..++
T Consensus 93 A~~~~~~lL~~eP~-n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQ-NNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-CHHHHHHHHHHHHHH
Confidence 99999999999996 766655444444433
No 226
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.44 E-value=7e-06 Score=55.13 Aligned_cols=122 Identities=14% Similarity=-0.009 Sum_probs=99.8
Q ss_pred HhCCCchhhHHHHHHHHHHcCCH------HHHHHHHHHHHhcCCCC--------HHHHHHHHHHHHHcCChHHHHHHHHH
Q 027158 18 KQFPESKRVGRLEGILLEAKGLW------AEAEKAYSSLLEDNPLD--------PVLHKRRVAIAKAQGNFPTAIEWLNK 83 (227)
Q Consensus 18 ~~~p~~~~~~~~~a~~~~~~~~~------~~A~~~~~~~l~~~p~~--------~~~~~~l~~~~~~~~~~~~A~~~~~~ 83 (227)
-..|++++.|..........|+. +.-+..|++++..-|.. ..+|...+.. ...++.++|...|+.
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~ 85 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQM 85 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 35689999999999999988999 88899999999986643 4556666654 566999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 84 YLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 84 ~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
++......+..|...|..-.++|+...|...+.+++...|..... +..|..-...|.
T Consensus 86 a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~-le~a~~nl~~~~ 142 (161)
T 4h7y_A 86 ARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALRNLNLQK 142 (161)
T ss_dssp HHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH-HHHHHHHHHTTC
T ss_pred HHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH-HHHHHHhhhcCC
Confidence 999888889999999999999999999999999999999986553 444555556665
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.05 E-value=0.0001 Score=50.55 Aligned_cols=115 Identities=13% Similarity=-0.081 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHHcC---CCHH
Q 027158 26 VGRLEGILLEAKGLWAEAEKAYSSLLEDN---PLD------PVLHKRRVAIAKAQGNFPTAIEWLNKYLETFM---ADHD 93 (227)
Q Consensus 26 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~---p~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p---~~~~ 93 (227)
+++.-...+...|.|+.|+-....++... |+- ..++..+|..++..|+|..|...|+++++... .++.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34445556666777777777777665542 221 13566777777777777777777777765432 1211
Q ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 027158 94 AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYAST 155 (227)
Q Consensus 94 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~ 155 (227)
....++. ...+.. ... .+.+.+..+.+|.|+.++|+ +++|+..++.+
T Consensus 102 ~~~~~~~----~ss~p~-------s~~-~~~e~Elkykia~C~~~l~~---~~~Ai~~Le~I 148 (167)
T 3ffl_A 102 VRPSTGN----SASTPQ-------SQC-LPSEIEVKYKLAECYTVLKQ---DKDAIAILDGI 148 (167)
T ss_dssp --------------------------C-CCCHHHHHHHHHHHHHHTTC---HHHHHHHHHTS
T ss_pred ccccccc----cCCCcc-------ccc-ccchHHHHHHHHHHHHHHCC---HHHHHHHHhcC
Confidence 1111110 000000 011 12344677888888888888 88888887654
No 228
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.03 E-value=6.7e-05 Score=51.41 Aligned_cols=122 Identities=13% Similarity=0.086 Sum_probs=75.3
Q ss_pred CCCChHHHHHHHHHHHHhCCCch---------hhHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESK---------RVGRLEGILLEAKGLWAEAEKAYSSLLEDN---PLDPVLHKRRVAIAK 69 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~---------~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~---p~~~~~~~~l~~~~~ 69 (227)
+.|.|+-|+.+...++....+++ .++..+|+.++..++|..|...|++++... +........++.
T Consensus 32 d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~--- 108 (167)
T 3ffl_A 32 AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGN--- 108 (167)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---------------
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccc---
Confidence 46788889888888776543333 378899999999999999999999998752 222211101110
Q ss_pred HcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 027158 70 AQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVL 136 (227)
Q Consensus 70 ~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 136 (227)
...... ... .+.+.+..+.++.|+...+++++|+..++..- .....+.+...||..|
T Consensus 109 -~ss~p~-------s~~-~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 109 -SASTPQ-------SQC-LPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp ----------------C-CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred -cCCCcc-------ccc-ccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 000000 011 13456778888889999999998888866531 1224566667777654
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.01 E-value=0.00023 Score=46.86 Aligned_cols=74 Identities=8% Similarity=-0.108 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHH
Q 027158 57 DPVLHKRRVAIAKAQGN---FPTAIEWLNKYLETFMA-DHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHL 130 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~~---~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 130 (227)
++.+.+++|.++.+..+ ..+++.+++..+..+|. .-+.++.+|..+++.|+|++|..+.+.+++..|++..+..
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 34555555555555443 23556666666655553 2455666666666666666666666666666666655433
No 230
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.96 E-value=0.0006 Score=45.45 Aligned_cols=72 Identities=8% Similarity=-0.099 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Q 027158 57 DPVLHKRRVAIAKAQGN---FPTAIEWLNKYLETFMA-DHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLY 128 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~~---~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 128 (227)
++.+.++++.++.+..+ ..+++.+++..+...|. .-+..+.+|..+++.|+|++|..+.+.+++..|+|..+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 44555555555555433 23455555555555543 23445555555555555555555555555555555444
No 231
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.90 E-value=0.0011 Score=44.14 Aligned_cols=85 Identities=12% Similarity=0.012 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHHHHHHcc---cHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCch
Q 027158 89 MADHDAWRELAEIYVSLQ---MYKQAAFCYEELILSQPT-VPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNT 164 (227)
Q Consensus 89 p~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~ 164 (227)
+.++.+.+++|.++.... +..+++.+++..+...|. .-..++.+|..++++|+ |.+|..+.+..++..|+ +.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~---Y~~Ar~y~d~lL~~eP~-n~ 111 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGE---YSMAKRYVDTLFEHERN-NK 111 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHTCCC-CH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhh---HHHHHHHHHHHHhcCCC-cH
Confidence 457889999999998875 456899999999998885 46789999999999999 99999999999999996 76
Q ss_pred hHHHhHHHHHHHH
Q 027158 165 KALFGICLCSSAI 177 (227)
Q Consensus 165 ~~~~~l~~~~~~~ 177 (227)
.+..-...+..++
T Consensus 112 QA~~Lk~~Ie~~i 124 (144)
T 1y8m_A 112 QVGALKSMVEDKI 124 (144)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6655444444443
No 232
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.85 E-value=0.00038 Score=45.79 Aligned_cols=85 Identities=12% Similarity=0.014 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHHHcc---cHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchh
Q 027158 90 ADHDAWRELAEIYVSLQ---MYKQAAFCYEELILSQPT-VPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTK 165 (227)
Q Consensus 90 ~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~ 165 (227)
-++.+.+++|.++.+.. +...++.+++..++.+|. .-..++.+|..++++|+ |.+|..+...+++..|+ +..
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgd---Y~~Ar~y~d~lL~~eP~-N~Q 113 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGE---YSMAKRYVDTLFEHERN-NKQ 113 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHTTCTT-CHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhh---HHHHHHHHHHHHhhCCC-CHH
Confidence 46788999999998875 456899999999998884 47789999999999999 99999999999999996 776
Q ss_pred HHHhHHHHHHHHH
Q 027158 166 ALFGICLCSSAIA 178 (227)
Q Consensus 166 ~~~~l~~~~~~~~ 178 (227)
+..-...+..++.
T Consensus 114 A~~Lk~~Ie~ki~ 126 (134)
T 3o48_A 114 VGALKSMVEDKIQ 126 (134)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6655555544444
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00016 Score=61.76 Aligned_cols=112 Identities=18% Similarity=0.216 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHHHHH--Hc-CCHHHHHHHHHHHHhc--------CCCC----------HHHHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLE--AK-GLWAEAEKAYSSLLED--------NPLD----------PVLHKRR 64 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~--~~-~~~~~A~~~~~~~l~~--------~p~~----------~~~~~~l 64 (227)
++.|+.+++++...+|.... .+..+.+.. .. .+--+|+....+.++. .+.+ ...+...
T Consensus 265 ~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Q 343 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQ 343 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHH
Confidence 46688888888888775432 222222221 11 2334666666666532 2222 2345555
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 027158 65 VAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEEL 118 (227)
Q Consensus 65 ~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 118 (227)
+..+...|+++-|+.+-++++..-|.+...|..|+.+|...|+|+.|+-.++.+
T Consensus 344 a~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 344 TNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 666777888888888888888888888888888888888888888888766554
No 234
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0008 Score=57.54 Aligned_cols=116 Identities=12% Similarity=-0.065 Sum_probs=87.0
Q ss_pred HcCC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH--Hc-CChHHHHHHHHHHHHH--------cCCC----------HH
Q 027158 36 AKGL-WAEAEKAYSSLLEDNPLDPVLHKRRVAIAK--AQ-GNFPTAIEWLNKYLET--------FMAD----------HD 93 (227)
Q Consensus 36 ~~~~-~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~--~~-~~~~~A~~~~~~~l~~--------~p~~----------~~ 93 (227)
..++ ++.|+..+++....+|.....+ ..+.+.. .. .+--+|+..+.+.++. .+.+ ..
T Consensus 260 ~t~~~~~~a~~~le~L~~~~p~~~~~~-~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 338 (754)
T 4gns_B 260 ITPSLVDFTIDYLKGLTKKDPIHDIYY-KTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSD 338 (754)
T ss_dssp TCGGGHHHHHHHHHHHHHHCGGGHHHH-HHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhhCCchhHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchH
Confidence 3455 6889999999999999765433 2222222 22 2344678888877742 1222 23
Q ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 027158 94 AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYAST 155 (227)
Q Consensus 94 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~ 155 (227)
....-+..+...|+|+.|+.+.++|+...|.....|..|+.+|..+|+ |+.|+-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d---~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEE---YEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC---HHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhcc---HHHHHHHHhcC
Confidence 455567788889999999999999999999999999999999999999 99999877655
No 235
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.011 Score=41.03 Aligned_cols=104 Identities=14% Similarity=0.003 Sum_probs=57.5
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHH
Q 027158 33 LLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAA 112 (227)
Q Consensus 33 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~ 112 (227)
.....|+++.|.+..+.. ++...|..+|......|+++-|+.+|.++- + +..+..+|...|+-+.-.
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~-----D---~~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH-----S---FDKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT-----C---HHHHHHHHHHHTCHHHHH
T ss_pred HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC-----C---HHHHHHHHHHhCCHHHHH
Confidence 345667888887776654 567778888888888888888888877642 1 222333344444444443
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 113 FCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 113 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
..-+.+...... .....+++.+|+ +++++..|.+.-+
T Consensus 81 kla~iA~~~g~~-----n~af~~~l~lGd---v~~~i~lL~~~~r 117 (177)
T 3mkq_B 81 KMQNIAQTREDF-----GSMLLNTFYNNS---TKERSSIFAEGGS 117 (177)
T ss_dssp HHHHHHHHTTCH-----HHHHHHHHHHTC---HHHHHHHHHHTTC
T ss_pred HHHHHHHHCccH-----HHHHHHHHHcCC---HHHHHHHHHHCCC
Confidence 333333322221 111233445566 6666666544433
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=97.12 E-value=0.038 Score=45.11 Aligned_cols=81 Identities=17% Similarity=0.020 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHH
Q 027158 94 AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLC 173 (227)
Q Consensus 94 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (227)
....||++......+..|..+|.+|..+.|++...+..+|.+....|+ .-.|+-+|.+++..... .+.+.-++...
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~---~l~a~y~y~rsl~~~~P-f~~a~~nL~~~ 229 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGD---HLTTIFYYCRSIAVKFP-FPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTC---HHHHHHHHHHHHSSSBC-CHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccc---cHHHHHHHHHHHhcCCC-ChhHHHHHHHH
Confidence 556789999888999999999999999999999999999999999999 99999999999887663 77777777777
Q ss_pred HHHHH
Q 027158 174 SSAIA 178 (227)
Q Consensus 174 ~~~~~ 178 (227)
.....
T Consensus 230 f~~~~ 234 (497)
T 1ya0_A 230 LSKAL 234 (497)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 76654
No 237
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=97.11 E-value=0.0054 Score=50.08 Aligned_cols=79 Identities=14% Similarity=0.067 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 027158 60 LHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYT 138 (227)
Q Consensus 60 ~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 138 (227)
.+..+|.+......+..|..+|.+|..+.|++...+..||.+....|+.-.|+.+|-+++......+.+..++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3456777777777788888888888888888888888888888888888888888888887665566666666665543
No 238
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.10 E-value=0.021 Score=45.24 Aligned_cols=107 Identities=15% Similarity=-0.002 Sum_probs=73.0
Q ss_pred HHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHH
Q 027158 35 EAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTA-IEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAF 113 (227)
Q Consensus 35 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A-~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~ 113 (227)
...|+.+.|...+.+++.+.....-. ... ...+-.+ ...+++. ...+...++..+...|++.+|+.
T Consensus 126 ~~~~~~~~a~~~l~~Al~L~rG~~L~--~~~-----~~~w~~~~r~~l~~~------~~~a~~~~~~~~l~~g~~~~a~~ 192 (388)
T 2ff4_A 126 AAAGRFEQASRHLSAALREWRGPVLD--DLR-----DFQFVEPFATALVED------KVLAHTAKAEAEIACGRASAVIA 192 (388)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCSSTTG--GGT-----TSTTHHHHHHHHHHH------HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCC--CCC-----chhHHHHHHHHHHHH------HHHHHHHHHHHHHHCCCHHHHHH
Confidence 34588889999999999885432110 000 0111111 1111111 12345667788888899999999
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 114 CYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 114 ~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
.+..++..+|.+..++..+..+++..|+ ..+|+..|+++.+
T Consensus 193 ~l~~~~~~~P~~E~~~~~lm~al~~~Gr---~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 193 ELEALTFEHPYREPLWTQLITAYYLSDR---QSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHH
Confidence 9999999999998899999999999999 8888888888755
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.04 E-value=0.032 Score=41.43 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=71.2
Q ss_pred HHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHH
Q 027158 34 LEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAF 113 (227)
Q Consensus 34 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~ 113 (227)
....|+.++|+......++.+|.+......+..+++-.|+++.|..-++.+.+++|.....-..+..+. .|..
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI-------~aE~ 79 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLV-------KAAQ 79 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH-------HHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHH-------HHHH
Confidence 455677888888888888888888888878888888888888888888888888887644322111110 1111
Q ss_pred HHHHHHh--hC------CCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 114 CYEELIL--SQ------PTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 114 ~~~~al~--~~------p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.=.+++. .. |........-+......|+ .++|...-.++++..|.
T Consensus 80 ~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~---~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 80 ARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQD---YEQVSELALQIEELRQE 132 (273)
T ss_dssp HHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCC---HHHHHHHHHHHHhcCcc
Confidence 1111111 11 1112233334445556677 88888887777777653
No 240
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.87 E-value=0.039 Score=43.64 Aligned_cols=97 Identities=14% Similarity=-0.011 Sum_probs=61.2
Q ss_pred HHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHH-HHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHH
Q 027158 69 KAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQA-AFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILL 147 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A-~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~ 147 (227)
...|+.+.|...+.+++.+....+-. ... ...|-.+ ...++... ..+...++..+...|+ +.+
T Consensus 126 ~~~~~~~~a~~~l~~Al~L~rG~~L~--~~~-----~~~w~~~~r~~l~~~~------~~a~~~~~~~~l~~g~---~~~ 189 (388)
T 2ff4_A 126 AAAGRFEQASRHLSAALREWRGPVLD--DLR-----DFQFVEPFATALVEDK------VLAHTAKAEAEIACGR---ASA 189 (388)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCSSTTG--GGT-----TSTTHHHHHHHHHHHH------HHHHHHHHHHHHHTTC---HHH
T ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCC--CCC-----chhHHHHHHHHHHHHH------HHHHHHHHHHHHHCCC---HHH
Confidence 34578888888888888875432110 000 0111111 11111111 1234567888899999 999
Q ss_pred HHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhc
Q 027158 148 AKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTK 182 (227)
Q Consensus 148 A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (227)
|+..+..++..+|- +...+..+..++...++...
T Consensus 190 a~~~l~~~~~~~P~-~E~~~~~lm~al~~~Gr~~~ 223 (388)
T 2ff4_A 190 VIAELEALTFEHPY-REPLWTQLITAYYLSDRQSD 223 (388)
T ss_dssp HHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHH
Confidence 99999999999995 77788788777777666443
No 241
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.86 E-value=0.032 Score=49.34 Aligned_cols=98 Identities=7% Similarity=-0.102 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC-CCCHHHHHHHH
Q 027158 59 VLHKRRVAIAKAQGNFPTAIEWLNKYLET----FMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQ-PTVPLYHLAYA 133 (227)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la 133 (227)
..+..+...+++.|+.++|...|....+. ..-+...|..+...|.+.|++++|..+|++..... ..|..++..+-
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI 207 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAAL 207 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 45777788888888888888888665432 23467788888888888888888888888887543 23566666677
Q ss_pred HHHHHcCCCCcH-HHHHHHHHHHhhhc
Q 027158 134 DVLYTLGGVDNI-LLAKKYYASTIDLT 159 (227)
Q Consensus 134 ~~~~~~g~~~~~-~~A~~~~~~~~~~~ 159 (227)
.++.+.|+ . ++|...|++..+..
T Consensus 208 ~glcK~G~---~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 208 QCMGRQDQ---DAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHHTC---CHHHHHHHHHHHHHHT
T ss_pred HHHHhCCC---cHHHHHHHHHHHHHcC
Confidence 77777776 4 57778888877664
No 242
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.061 Score=37.37 Aligned_cols=99 Identities=15% Similarity=-0.021 Sum_probs=69.7
Q ss_pred CCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 027158 2 DCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWL 81 (227)
Q Consensus 2 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 81 (227)
+.|+++.|.++.+.+ ++...|..+|......|+++-|..+|.++-. +..+..+|...|+.+.-...-
T Consensus 17 ~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~~e~L~kla 83 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGDVNKLSKMQ 83 (177)
T ss_dssp HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCCHHHHHHHH
Confidence 578899998887765 5678899999999999999999999988653 235556677778776655444
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 027158 82 NKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEEL 118 (227)
Q Consensus 82 ~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 118 (227)
+.+.... + +.....+++..|+++++++.|.+.
T Consensus 84 ~iA~~~g-~----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 84 NIAQTRE-D----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHTT-C----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHCc-c----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 4443222 2 223345567788888888887554
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.82 E-value=0.021 Score=49.15 Aligned_cols=108 Identities=15% Similarity=-0.021 Sum_probs=82.7
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHH--------HHHcCCCHHHHHHHHHHH
Q 027158 31 GILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKY--------LETFMADHDAWRELAEIY 102 (227)
Q Consensus 31 a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~--------l~~~p~~~~~~~~la~~~ 102 (227)
.......|++++|.+..+ ..++...|..+|..+...|+++.|+.+|.++ +.....+.+.+..++...
T Consensus 659 f~~~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a 733 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDA 733 (814)
T ss_dssp HHHHHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHH
Confidence 345577899999998753 3467889999999999999999999999985 233466777888889999
Q ss_pred HHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Q 027158 103 VSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYAS 154 (227)
Q Consensus 103 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~ 154 (227)
...|+++.|..+|.+.= ++ -....+|...++ +++|...-++
T Consensus 734 ~~~~~~~~A~~~~~~~g-----~~---~~a~~~~~~~~~---~~~A~~lA~~ 774 (814)
T 3mkq_A 734 ETTGKFNLAFNAYWIAG-----DI---QGAKDLLIKSQR---FSEAAFLGST 774 (814)
T ss_dssp HHTTCHHHHHHHHHHHT-----CH---HHHHHHHHHTTC---HHHHHHHHHH
T ss_pred HHcCchHHHHHHHHHcC-----CH---HHHHHHHHHcCC---hHHHHHHHHH
Confidence 99999999988875531 11 234466788888 8888887664
No 244
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.77 E-value=0.068 Score=36.84 Aligned_cols=98 Identities=15% Similarity=0.033 Sum_probs=47.9
Q ss_pred CCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH--H-----------
Q 027158 21 PESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLE--T----------- 87 (227)
Q Consensus 21 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~--~----------- 87 (227)
|..+.....++..+.-.|++..|+-++.. -+...+.+.-..|+....++..|+..++..++ .
T Consensus 30 ~~~~eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~ 104 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQ 104 (242)
T ss_dssp ----CTHHHHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHH
T ss_pred cCChHHHhhhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 33334455555555555666555544322 22334444455555666666666666665551 1
Q ss_pred ----cCCCHH-HHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Q 027158 88 ----FMADHD-AWRELAEIYVSLQMYKQAAFCYEELILSQP 123 (227)
Q Consensus 88 ----~p~~~~-~~~~la~~~~~~~~~~~A~~~~~~al~~~p 123 (227)
+|.+.+ .+..+|.++...|+-++|+.++.......|
T Consensus 105 ~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 105 EMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred eeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 123322 233455555556666666666655554443
No 245
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.65 E-value=0.13 Score=38.29 Aligned_cols=118 Identities=11% Similarity=0.015 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHH
Q 027158 1 MDCQCLDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEW 80 (227)
Q Consensus 1 l~~~~~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~ 80 (227)
+..|+.++|+..+...++..|.+......+...+.-.|+|+.|...++.+.+++|.....-..+-.. -.|...
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l-------I~aE~~ 80 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL-------VKAAQA 80 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH-------HHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH-------HHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999865332111110 111112
Q ss_pred HHHHHH-----HcCCCHHHHHH---HHHHHHHcccHHHHHHHHHHHHhhCCCC
Q 027158 81 LNKYLE-----TFMADHDAWRE---LAEIYVSLQMYKQAAFCYEELILSQPTV 125 (227)
Q Consensus 81 ~~~~l~-----~~p~~~~~~~~---la~~~~~~~~~~~A~~~~~~al~~~p~~ 125 (227)
=.+++. ..+..+..|.. -+......|+.++|...-.+++...|..
T Consensus 81 R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 81 RKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 222221 12333444543 3555566799999999999999887754
No 246
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.62 E-value=0.1 Score=46.20 Aligned_cols=97 Identities=9% Similarity=-0.129 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHc-CCCHHHHHHHHH
Q 027158 26 VGRLEGILLEAKGLWAEAEKAYSSLLED----NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETF-MADHDAWRELAE 100 (227)
Q Consensus 26 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~----~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~~la~ 100 (227)
.+..+-..+...|+.++|..++...-+. ..-+...|+.+...+++.|++++|...|++..+.. .-|...|..+..
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 4667778999999999999999776532 34478899999999999999999999999998753 336788888888
Q ss_pred HHHHccc-HHHHHHHHHHHHhhC
Q 027158 101 IYVSLQM-YKQAAFCYEELILSQ 122 (227)
Q Consensus 101 ~~~~~~~-~~~A~~~~~~al~~~ 122 (227)
++.+.|+ .+.|..+|++.....
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcHHHHHHHHHHHHHcC
Confidence 9999998 578999999998654
No 247
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.027 Score=45.20 Aligned_cols=101 Identities=12% Similarity=-0.061 Sum_probs=78.6
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCC--CH----H
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL---DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMA--DH----D 93 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~--~~----~ 93 (227)
...++..+|..+...|+++.|.+.|.++...... -.+.+.....++...+++..+...+.++-..... ++ .
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 3457788999999999999999999998876432 2477788888899999999999999998766432 22 2
Q ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Q 027158 94 AWRELAEIYVSLQMYKQAAFCYEELILSQP 123 (227)
Q Consensus 94 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p 123 (227)
.....|.++...++|..|...|-.++....
T Consensus 210 lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 210 YKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 444567777888999999999988876544
No 248
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.0084 Score=48.85 Aligned_cols=123 Identities=12% Similarity=0.018 Sum_probs=58.9
Q ss_pred CCCCChHHHHHHHHHHHH--h---------CCCchhhHHHHHHHHHHcCCHHHHH----------HHHHHHHh-----cC
Q 027158 1 MDCQCLDVAKDCIKVLQK--Q---------FPESKRVGRLEGILLEAKGLWAEAE----------KAYSSLLE-----DN 54 (227)
Q Consensus 1 l~~~~~~~A~~~~~~~~~--~---------~p~~~~~~~~~a~~~~~~~~~~~A~----------~~~~~~l~-----~~ 54 (227)
+|.+++++|..+-..++. . ++=...+|+..+.++...|+..... ..+-.+++ .+
T Consensus 147 ~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D 226 (523)
T 4b4t_S 147 WDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHD 226 (523)
T ss_dssp --------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSS
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccC
Confidence 466788888777665541 1 2234567777777777777665421 12222222 23
Q ss_pred CC-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Q 027158 55 PL-DPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD-------HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV 125 (227)
Q Consensus 55 p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~-------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 125 (227)
+. ...+++.+-..|...+.++.|..+..+.. +|.+ ...++.+|.++.-+++|.+|..++..|+...|.+
T Consensus 227 ~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 227 NETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred cchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 32 24667778889999999999999999984 6643 4467788999999999999999999999887754
No 249
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.32 Score=39.21 Aligned_cols=152 Identities=18% Similarity=0.163 Sum_probs=106.3
Q ss_pred CChHHHHHHHHHHHHh------CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc---------------------CCC
Q 027158 4 QCLDVAKDCIKVLQKQ------FPESKRVGRLEGILLEAKGLWAEAEKAYSSLLED---------------------NPL 56 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~---------------------~p~ 56 (227)
|+++.|++.+..+-+. .+....+...+..++...|+|+...+.+.-.... .|.
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~~~~~ 109 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKS 109 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc
Confidence 4567777766555432 1345666777778888888887764443322111 121
Q ss_pred C--------------------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHHc-CC-C----HHHHHHHHHHHHH
Q 027158 57 D--------------------------PVLHKRRVAIAKAQGNFPTAIEWLNKYLETF-MA-D----HDAWRELAEIYVS 104 (227)
Q Consensus 57 ~--------------------------~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~-p~-~----~~~~~~la~~~~~ 104 (227)
. ..+...++.++...|++.+|...+.....-- .. + .+.+.....+|..
T Consensus 110 ~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~ 189 (445)
T 4b4t_P 110 LDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL 189 (445)
T ss_dssp THHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 1 2344678999999999999999999976432 11 1 4577888899999
Q ss_pred cccHHHHHHHHHHHHh---hCCCCH----HHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 105 LQMYKQAAFCYEELIL---SQPTVP----LYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 105 ~~~~~~A~~~~~~al~---~~p~~~----~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
.++|..|...+.++.. ..+.++ ..+...|..+...++ |.+|..+|..+++.
T Consensus 190 ~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~---y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 190 KGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKRE---YLEVAQYLQEIYQT 247 (445)
T ss_dssp HTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHhc
Confidence 9999999999998742 233343 356777888888999 99999999999875
No 250
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.30 E-value=0.11 Score=41.69 Aligned_cols=100 Identities=12% Similarity=-0.070 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC--CCHH----H
Q 027158 58 PVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMAD---HDAWRELAEIYVSLQMYKQAAFCYEELILSQP--TVPL----Y 128 (227)
Q Consensus 58 ~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p--~~~~----~ 128 (227)
..++..+|..+...|+++.|.+.|.++....... .+.+.....++...++|..+...+.++-.... .++. .
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 4577899999999999999999999998865443 67888889999999999999999999875422 2222 3
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
....|.++...++ |..|...|..++....
T Consensus 211 k~~~gl~~l~~r~---f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 211 KTYYGIHCLAVRN---FKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHGGGGTSC---HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCh---HHHHHHHHHHHhccCC
Confidence 4445566677788 9999999998876543
No 251
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.28 E-value=0.16 Score=43.74 Aligned_cols=106 Identities=20% Similarity=0.159 Sum_probs=75.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccc
Q 027158 28 RLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQM 107 (227)
Q Consensus 28 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~ 107 (227)
......+...|.++.|+...+ ++. .........|++++|.+..+. .+++..|..+|..+...++
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~--------~~~---~~f~~~l~~~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~ 696 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISP--------DQD---QKFELALKVGQLTLARDLLTD-----ESAEMKWRALGDASLQRFN 696 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCC--------CHH---HHHHHHHHHTCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCChHHheecCC--------Ccc---hheehhhhcCCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCC
Confidence 555667778899898886542 232 223456788999999998653 4788999999999999999
Q ss_pred HHHHHHHHHHHHh--------hCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH
Q 027158 108 YKQAAFCYEELIL--------SQPTVPLYHLAYADVLYTLGGVDNILLAKKYY 152 (227)
Q Consensus 108 ~~~A~~~~~~al~--------~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~ 152 (227)
++.|+.+|.++-. ....+...+..++......|+ +..|...|
T Consensus 697 ~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~---~~~A~~~~ 746 (814)
T 3mkq_A 697 FKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGK---FNLAFNAY 746 (814)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTC---HHHHHHHH
T ss_pred HHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCc---hHHHHHHH
Confidence 9999999998632 224556656666666655555 55555444
No 252
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.12 E-value=0.29 Score=38.68 Aligned_cols=94 Identities=17% Similarity=-0.001 Sum_probs=69.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCC--CC----HHHHHHHHHHHHHcCChHHHHHHHHHHHHHc---CCCH----HHH
Q 027158 29 LEGILLEAKGLWAEAEKAYSSLLEDNP--LD----PVLHKRRVAIAKAQGNFPTAIEWLNKYLETF---MADH----DAW 95 (227)
Q Consensus 29 ~~a~~~~~~~~~~~A~~~~~~~l~~~p--~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~---p~~~----~~~ 95 (227)
.+|..|+..|+|.+|...+.+.++... ++ .+++.....+|...+++.++...+.++.... +.+| ...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 578888888999999888888877421 12 2556666778888899999998888887653 2333 344
Q ss_pred HHHHHHHH-HcccHHHHHHHHHHHHhhC
Q 027158 96 RELAEIYV-SLQMYKQAAFCYEELILSQ 122 (227)
Q Consensus 96 ~~la~~~~-~~~~~~~A~~~~~~al~~~ 122 (227)
..-|..++ ..++|..|..+|-+++...
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 56677888 7899999988888887543
No 253
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=95.97 E-value=0.23 Score=45.00 Aligned_cols=125 Identities=11% Similarity=0.003 Sum_probs=91.1
Q ss_pred HHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc---C--------------------CCCHHHHHHHHHHHHHcC
Q 027158 16 LQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLED---N--------------------PLDPVLHKRRVAIAKAQG 72 (227)
Q Consensus 16 ~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~---~--------------------p~~~~~~~~l~~~~~~~~ 72 (227)
+....|.++...+.+|.++...|++++|..+|+++-.- . ...+..|.....++...+
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~ 913 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 913 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTS
T ss_pred HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcC
Confidence 44456777778899999999999999999999887331 0 112345667777888899
Q ss_pred ChHHHHHHHHHHHHHcCCC-H----HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 73 NFPTAIEWLNKYLETFMAD-H----DAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 73 ~~~~A~~~~~~~l~~~p~~-~----~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
.++.++++-+.+++..+.+ . ..|..+-..+...|+|++|...+-..-. .......+..+-..++..|+
T Consensus 914 ~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd-~~~r~~cLr~LV~~lce~~~ 986 (1139)
T 4fhn_B 914 AYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLST-TPLKKSCLLDFVNQLTKQGK 986 (1139)
T ss_dssp CCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHH-SSSCHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999876543 2 2688888999999999999777644321 12334556666666666665
No 254
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.76 E-value=0.55 Score=37.11 Aligned_cols=119 Identities=12% Similarity=0.017 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHcCChHHHHHHHHHHHHHcCC--C----HHHHHHHHHHHHHc
Q 027158 38 GLWAEAEKAYSSLLEDNPLDPV------LHKRRVAIAKAQGNFPTAIEWLNKYLETFMA--D----HDAWRELAEIYVSL 105 (227)
Q Consensus 38 ~~~~~A~~~~~~~l~~~p~~~~------~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~--~----~~~~~~la~~~~~~ 105 (227)
+..+.-++.+..+++...+.-. +-..+|..|...|++.+|...+.+.++.-.. + .+.+..-..+|...
T Consensus 73 ~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~ 152 (394)
T 3txn_A 73 AGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHAL 152 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Confidence 4445555566666653222211 2347899999999999999999998875322 2 44667778889999
Q ss_pred ccHHHHHHHHHHHHhhC---CCCHH----HHHHHHHHHH-HcCCCCcHHHHHHHHHHHhhhc
Q 027158 106 QMYKQAAFCYEELILSQ---PTVPL----YHLAYADVLY-TLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 106 ~~~~~A~~~~~~al~~~---p~~~~----~~~~la~~~~-~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
+++.++...+.++.... +.+|. ....-|..+. ..++ |..|...|-+++..-
T Consensus 153 ~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rd---yk~A~~~F~eaf~~f 211 (394)
T 3txn_A 153 SNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERD---FKTAFSYFYEAFEGF 211 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSC---HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccC---HHHHHHHHHHHHhcc
Confidence 99999999999987543 23333 4455566677 7888 999999999997543
No 255
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.34 Score=39.05 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCC----HHHHHHHHHHHHHcCChHHHHHHHHHHHH---HcCCCH---
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDN--PLD----PVLHKRRVAIAKAQGNFPTAIEWLNKYLE---TFMADH--- 92 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--p~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~l~---~~p~~~--- 92 (227)
++...++.++...|++.+|...+....... ..+ ..++.....++...+++.+|...++++.. ..+..+
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk 217 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLK 217 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHH
Confidence 344678999999999999999999886532 122 36677788899999999999999999753 233343
Q ss_pred -HHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 93 -DAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 93 -~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
..+...|.++...++|.+|-.+|..++..
T Consensus 218 ~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 218 LEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 35667788999999999999999999864
No 256
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.63 E-value=0.32 Score=33.55 Aligned_cols=116 Identities=15% Similarity=0.043 Sum_probs=86.3
Q ss_pred HHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHH
Q 027158 35 EAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFC 114 (227)
Q Consensus 35 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~ 114 (227)
.+-.+++.++-.-.-.....| .....++.++.-.|.+..++-.+.. -+...+.+.-+.||....+|..|+.+
T Consensus 13 ~kY~dYdt~~fLsa~L~~~~~---eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~ 84 (242)
T 3kae_A 13 IRYRDYETAIFLAACLLPCKP---EYRMLMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKS 84 (242)
T ss_dssp HHTTCHHHHHHHHHHHC-------CTHHHHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhcccccHHHHHHHHHccCCh---HHHhhhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344677777654433333344 4445677888899999988877653 45677888889999999999999999
Q ss_pred HHHHHh--h---------------CCCCHH-HHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 115 YEELIL--S---------------QPTVPL-YHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 115 ~~~al~--~---------------~p~~~~-~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
++..+. . +|.+.+ ....+|.++...|+ .++|+.+|.......|-
T Consensus 85 le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~---r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 85 LESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGY---REEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCCC
T ss_pred HHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcC---HHHhhhHhhhhcCCccc
Confidence 999993 2 233433 56778999999999 99999999999998873
No 257
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.18 E-value=0.16 Score=41.50 Aligned_cols=126 Identities=10% Similarity=-0.024 Sum_probs=59.3
Q ss_pred HHHHHHcCCHHHHHHHHHHHHh--c---------CCCCHHHHHHHHHHHHHcCChHHH----------HHHHHHHHHH--
Q 027158 31 GILLEAKGLWAEAEKAYSSLLE--D---------NPLDPVLHKRRVAIAKAQGNFPTA----------IEWLNKYLET-- 87 (227)
Q Consensus 31 a~~~~~~~~~~~A~~~~~~~l~--~---------~p~~~~~~~~l~~~~~~~~~~~~A----------~~~~~~~l~~-- 87 (227)
-..+...+++++|..+-...+. . ++-...+|+.++.++...|+.... ...+-.++..
T Consensus 143 ~i~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~ 222 (523)
T 4b4t_S 143 QLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIAS 222 (523)
T ss_dssp ------------------------------------------------------------CHHHHHHHHTHHHHHHHHCC
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHh
Confidence 3445567888988887766551 1 344456677777777777765542 2233333322
Q ss_pred ---cCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Q 027158 88 ---FMA-DHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTV-------PLYHLAYADVLYTLGGVDNILLAKKYYASTI 156 (227)
Q Consensus 88 ---~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~ 156 (227)
++. .+..+..+-..|...+.|++|..+..++. .|.+ ..+++.+|.++...++ |.+|..++..++
T Consensus 223 lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~---Y~eA~~~L~~A~ 297 (523)
T 4b4t_S 223 LKHDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLD---YSTANEYIIAAI 297 (523)
T ss_dssp SCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHT
T ss_pred cccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHH
Confidence 222 15577888889999999999999999985 4432 3567888999999999 999999999999
Q ss_pred hhcCC
Q 027158 157 DLTGG 161 (227)
Q Consensus 157 ~~~~~ 161 (227)
...|.
T Consensus 298 rkap~ 302 (523)
T 4b4t_S 298 RKAPH 302 (523)
T ss_dssp SSCSC
T ss_pred HhCCc
Confidence 98875
No 258
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.55 E-value=0.74 Score=41.74 Aligned_cols=119 Identities=11% Similarity=-0.113 Sum_probs=88.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHH--------------------c
Q 027158 29 LEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLET--------------------F 88 (227)
Q Consensus 29 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~--------------------~ 88 (227)
.+...+...+.++-+.+ .+...|.++...+.+|.++...|++++|..+|+++-.- .
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 34455666677766554 34556778878899999999999999999999885210 1
Q ss_pred C---CCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC-CHH----HHHHHHHHHHHcCCCCcHHHHHHHHHH
Q 027158 89 M---ADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPT-VPL----YHLAYADVLYTLGGVDNILLAKKYYAS 154 (227)
Q Consensus 89 p---~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~----~~~~la~~~~~~g~~~~~~~A~~~~~~ 154 (227)
+ .-+..|..+..++...+.++.++++.+.|++..+. +.. .|.++=..+...|+ |++|...+..
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~---ye~Ay~aL~~ 963 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGK---FDAAHVALMV 963 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCC---SGGGGHHHHH
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCC---HHHHHHHHHh
Confidence 1 12456778888899999999999999999987653 332 56777778888999 9988776643
No 259
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=94.54 E-value=0.74 Score=38.72 Aligned_cols=124 Identities=10% Similarity=-0.018 Sum_probs=83.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc
Q 027158 30 EGILLEAKGLWAEAEKAYSSLLEDNPLDPVLH----KRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSL 105 (227)
Q Consensus 30 ~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~----~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~ 105 (227)
.+.......+.+.|...+.......+-+.... ..++.-....+...++...+.+.....+++.. .-..+...+..
T Consensus 220 ~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~r~Alr~ 298 (618)
T 1qsa_A 220 VAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSL-IERRVRMALGT 298 (618)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHH-HHHHHHHHHHC
Confidence 34445555788999999888765443333222 22222223334366788888886654443333 33333345577
Q ss_pred ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 106 QMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 106 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
|+++.|..+|+..-...+..+...+-+|.++...|+ .++|...|+++..
T Consensus 299 ~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~---~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 299 GDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGR---EAEAKEILHQLMQ 347 (618)
T ss_dssp TCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTC---HHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCC---HHHHHHHHHHHhc
Confidence 999999999987655444568888999999999999 9999999999876
No 260
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=91.99 E-value=3.2 Score=31.62 Aligned_cols=152 Identities=8% Similarity=-0.016 Sum_probs=89.6
Q ss_pred CCChHHHHHHHHHHHHhCC------CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHc
Q 027158 3 CQCLDVAKDCIKVLQKQFP------ESKRVGRLEGILLEAKGLWAEAEKAYSSLLED-----NPLDPVLHKRRVAIAKAQ 71 (227)
Q Consensus 3 ~~~~~~A~~~~~~~~~~~p------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~~l~~~~~~~ 71 (227)
.|+|=+|...++.+..++- +...+++.-+..+...|++..|..+..-.++. .|-+......+..++...
T Consensus 26 ~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~ 105 (312)
T 2wpv_A 26 AGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAEL 105 (312)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTC
T ss_pred ccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHC
Confidence 4677777777777766531 22234455566667778877776654444432 333445555566665553
Q ss_pred CCh-HHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHcccHHHHHHHHHHHH----------------h---hCCC
Q 027158 72 GNF-PTAIEWLNKYLETF-------MADHDAWRELAEIYVSLQMYKQAAFCYEELI----------------L---SQPT 124 (227)
Q Consensus 72 ~~~-~~A~~~~~~~l~~~-------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al----------------~---~~p~ 124 (227)
... ..=..+.++++... -.++..+..+|..|...|++.+|...|-..- . ..|.
T Consensus 106 p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~ 185 (312)
T 2wpv_A 106 DPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDS 185 (312)
T ss_dssp CTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred CCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcc
Confidence 321 12345556665542 1478999999999999999999988763110 1 1222
Q ss_pred CHHHHHHHHH-HHHHcCCCCcHHHHHHHHHHHhh
Q 027158 125 VPLYHLAYAD-VLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 125 ~~~~~~~la~-~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
....+...|. .|...|+ ...|...|....+
T Consensus 186 e~dlf~~RaVL~yL~l~n---~~~A~~~~~~f~~ 216 (312)
T 2wpv_A 186 TVAEFFSRLVFNYLFISN---ISFAHESKDIFLE 216 (312)
T ss_dssp HHHHHHHHHHHHHHHTTB---HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 2333333333 3556778 8888887776553
No 261
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.19 E-value=3 Score=37.06 Aligned_cols=107 Identities=10% Similarity=-0.121 Sum_probs=75.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH--------------------HH
Q 027158 28 RLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYL--------------------ET 87 (227)
Q Consensus 28 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l--------------------~~ 87 (227)
..+...+...|.++-|. ..+...|.++..-+.+|.++...|++++|..+|+++- ..
T Consensus 814 ~~l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~ 889 (950)
T 4gq2_M 814 TELVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEK 889 (950)
T ss_dssp HHHHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCc
Confidence 33555666677776553 4566777788777889999999999999999998742 11
Q ss_pred -cCC--CHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC-CCCHH----HHHHHHHHHHH
Q 027158 88 -FMA--DHDAWRELAEIYVSLQMYKQAAFCYEELILSQ-PTVPL----YHLAYADVLYT 138 (227)
Q Consensus 88 -~p~--~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~----~~~~la~~~~~ 138 (227)
.+. ....|.....++...+.++-++.+.+.|++.- ++++. .|..+=.+...
T Consensus 890 ~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a 948 (950)
T 4gq2_M 890 YHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACA 948 (950)
T ss_dssp TTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhh
Confidence 112 24578889999999999999999999999754 45554 44444444433
No 262
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=89.98 E-value=5.4 Score=30.69 Aligned_cols=151 Identities=9% Similarity=0.034 Sum_probs=82.8
Q ss_pred CCCh---HHHHHHHHHHHHhCC------CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHH
Q 027158 3 CQCL---DVAKDCIKVLQKQFP------ESKRVGRLEGILLEAKGLWAEAEKAYSSLLED-----NPLDPVLHKRRVAIA 68 (227)
Q Consensus 3 ~~~~---~~A~~~~~~~~~~~p------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~~l~~~~ 68 (227)
.|+| =+|-..++.+..++- +...+++.-+..+...|++..|..+..-.++. .|-+......+..++
T Consensus 25 ~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~ 104 (336)
T 3lpz_A 25 EGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCL 104 (336)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 4566 566666666655431 22233444556666667766666555433332 233345555566665
Q ss_pred HHcCCh-HHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHcccHHHHHHHHHH-------HH---------hhCCC
Q 027158 69 KAQGNF-PTAIEWLNKYLET-------FMADHDAWRELAEIYVSLQMYKQAAFCYEE-------LI---------LSQPT 124 (227)
Q Consensus 69 ~~~~~~-~~A~~~~~~~l~~-------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~-------al---------~~~p~ 124 (227)
.....- ..=..+.++++.. .-.++..+..+|..|...+++.+|...|-- .+ ...|.
T Consensus 105 ~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~ 184 (336)
T 3lpz_A 105 RLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESH 184 (336)
T ss_dssp TTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGG
T ss_pred HhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCc
Confidence 554431 1223344444443 124688999999999999999999777621 00 11223
Q ss_pred CHHHHHHHHH-HHHHcCCCCcHHHHHHHHHHHh
Q 027158 125 VPLYHLAYAD-VLYTLGGVDNILLAKKYYASTI 156 (227)
Q Consensus 125 ~~~~~~~la~-~~~~~g~~~~~~~A~~~~~~~~ 156 (227)
....+...|. .|...++ ...|...+....
T Consensus 185 e~dlfiaRaVL~yL~l~n---~~~A~~~~~~f~ 214 (336)
T 3lpz_A 185 TAPLYCARAVLPYLLVAN---VRAANTAYRIFT 214 (336)
T ss_dssp GHHHHHHHHHHHHHHTTC---HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCC---HHHHHHHHHHHH
Confidence 3333344443 3566777 888877555444
No 263
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.07 E-value=12 Score=33.33 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=70.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh---------------------h
Q 027158 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL---------------------S 121 (227)
Q Consensus 63 ~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~---------------------~ 121 (227)
.+...+...|.++-+. ..+..-|.++..-+.+|.++...|++++|..+|++|-. .
T Consensus 815 ~l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 3566667788777554 35567788888889999999999999999999986541 0
Q ss_pred CCCC--HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhc
Q 027158 122 QPTV--PLYHLAYADVLYTLGGVDNILLAKKYYASTIDLT 159 (227)
Q Consensus 122 ~p~~--~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~ 159 (227)
.+.. ..++..+..++...+- ++-++...+.|++.-
T Consensus 891 e~~~~~~~YY~hV~~LFE~~~a---~~~vi~fA~lAI~~~ 927 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFEESA---YIDALEFSLLADASK 927 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTC
T ss_pred cccchhHHHHHHHHHHHHhcCC---HHHHHHHHHHHHhhc
Confidence 1222 3478899999999999 999999999999754
No 264
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=85.11 E-value=6.5 Score=26.17 Aligned_cols=52 Identities=13% Similarity=-0.041 Sum_probs=23.9
Q ss_pred HHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 69 KAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 69 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
..+|+-++-...+...+.-.|-++.....+|.+|.+.|+..+|-+++.+|-+
T Consensus 102 v~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 102 VIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3444444444444444333444455555555555555555555555544443
No 265
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=83.66 E-value=4.5 Score=23.40 Aligned_cols=32 Identities=13% Similarity=-0.005 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH
Q 027158 28 RLEGILLEAKGLWAEAEKAYSSLLEDNPLDPV 59 (227)
Q Consensus 28 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 59 (227)
..+|..+...|++++|..+|-+|+..+|.-..
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 44677777777788888877788777766443
No 266
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=83.65 E-value=19 Score=30.34 Aligned_cols=140 Identities=9% Similarity=-0.068 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYL 85 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l 85 (227)
..++...+.+.....+++.. ...++...+..|++..|..++.++-...+......+-+|..+...|+.++|..+|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~-~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSL-IERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHH-HHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChHH-HHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44555555554443333322 22333344556888888888877655444556667777888888888888888888765
Q ss_pred HHc-----------------C---C---C-----HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 027158 86 ETF-----------------M---A---D-----HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLY 137 (227)
Q Consensus 86 ~~~-----------------p---~---~-----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 137 (227)
.-. | . . ...-...+..+...|....|...+..++... ++.-...++.+..
T Consensus 347 ~~~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~~--~~~~~~~la~~a~ 424 (618)
T 1qsa_A 347 QQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSK--SKTEQAQLARYAF 424 (618)
T ss_dssp TSCSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--CHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhcC--CHHHHHHHHHHHH
Confidence 310 0 0 0 0012344556667777777777777666432 2344455666666
Q ss_pred HcCCCCcHHHHHHH
Q 027158 138 TLGGVDNILLAKKY 151 (227)
Q Consensus 138 ~~g~~~~~~~A~~~ 151 (227)
..|. +..++..
T Consensus 425 ~~~~---~~~~v~~ 435 (618)
T 1qsa_A 425 NNQW---WDLSVQA 435 (618)
T ss_dssp HTTC---HHHHHHH
T ss_pred HCCC---hHHHHHH
Confidence 6666 6655543
No 267
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=83.29 E-value=13 Score=28.26 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 027158 124 TVPLYHLAYADVLYTLGGVDNILLAKKYYA 153 (227)
Q Consensus 124 ~~~~~~~~la~~~~~~g~~~~~~~A~~~~~ 153 (227)
.++..+..+|..++..|+ +.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~---~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDF---VYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTC---HHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCC---HHHHHHHHH
Confidence 578999999999999999 999999885
No 268
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=83.16 E-value=3.6 Score=29.17 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHH-----HHHHHHHHHHcCChHH
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVL-----HKRRVAIAKAQGNFPT 76 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~-----~~~l~~~~~~~~~~~~ 76 (227)
....+.+|.+++..++|.+|.+.+..|+...|.+... +..+.-+.+-.|+...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3567889999999999999999999999998876432 3333344455677553
No 269
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=82.98 E-value=5 Score=23.21 Aligned_cols=29 Identities=14% Similarity=0.063 Sum_probs=15.6
Q ss_pred HHHHHHHHcccHHHHHHHHHHHHhhCCCC
Q 027158 97 ELAEIYVSLQMYKQAAFCYEELILSQPTV 125 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~al~~~p~~ 125 (227)
.+|..+...|++++|...|-+|+...|+-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 44555555555555555555555555543
No 270
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=80.88 E-value=3.7 Score=24.88 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHH
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELI 119 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al 119 (227)
+..+...+..+...|+|++|+++.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3455667777777788888877766654
No 271
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=80.25 E-value=3.8 Score=24.38 Aligned_cols=16 Identities=19% Similarity=0.115 Sum_probs=7.8
Q ss_pred HcccHHHHHHHHHHHH
Q 027158 104 SLQMYKQAAFCYEELI 119 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al 119 (227)
..|+|++|+.+|..++
T Consensus 31 ~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 31 KEGNAEEAITNYKKAI 46 (83)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHH
Confidence 3455555555544444
No 272
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=79.36 E-value=4.1 Score=24.17 Aligned_cols=16 Identities=19% Similarity=0.164 Sum_probs=7.8
Q ss_pred HcccHHHHHHHHHHHH
Q 027158 104 SLQMYKQAAFCYEELI 119 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al 119 (227)
..|+|++|+.+|..++
T Consensus 23 ~~g~y~eAl~lY~~ai 38 (83)
T 2v6y_A 23 KEGKVEDAITYYKKAI 38 (83)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHH
Confidence 3455555555544444
No 273
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=78.91 E-value=9.3 Score=30.81 Aligned_cols=87 Identities=11% Similarity=0.026 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHhcCCC--------C----H----HHHHHHHHHHHHcCChHHHHHHHHHHHHHcC--C--------CH
Q 027158 39 LWAEAEKAYSSLLEDNPL--------D----P----VLHKRRVAIAKAQGNFPTAIEWLNKYLETFM--A--------DH 92 (227)
Q Consensus 39 ~~~~A~~~~~~~l~~~p~--------~----~----~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p--~--------~~ 92 (227)
..+++...+.+++...-+ + - .....+-.+|++.|+..-+...++..-...+ . -.
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 356677777777775211 1 0 2234556789999999998888866543322 1 14
Q ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhh-CCCC
Q 027158 93 DAWRELAEIYVSLQMYKQAAFCYEELILS-QPTV 125 (227)
Q Consensus 93 ~~~~~la~~~~~~~~~~~A~~~~~~al~~-~p~~ 125 (227)
...+.+|..++.+++|.+|...+..|+.. .|.+
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 57789999999999999999999999988 6654
No 274
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=77.93 E-value=7.4 Score=27.51 Aligned_cols=91 Identities=11% Similarity=-0.051 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 027158 59 VLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDA-----WRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYA 133 (227)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~-----~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 133 (227)
...+.+|.++...+++.+|...+..++...|.+... ...+--+-+-.|++.. ...+++ .+. ..+..+.
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~--~~y~~L~ 87 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHL--MQFAEVT 87 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTC--GGGHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cch--hHHHHHH
Confidence 456788999999999999999999999988876432 2333344455677553 233332 222 1345554
Q ss_pred HHHHHcCCCCcHHHHHHHHHHHhh
Q 027158 134 DVLYTLGGVDNILLAKKYYASTID 157 (227)
Q Consensus 134 ~~~~~~g~~~~~~~A~~~~~~~~~ 157 (227)
. ..+.|+...++++++.++..+.
T Consensus 88 ~-Avr~Gdl~~f~~~l~~~~~~f~ 110 (203)
T 3t5x_A 88 R-AVSEGNLLLLHEALAKHEAFFI 110 (203)
T ss_dssp H-HHHHTCHHHHHHHHHHTHHHHH
T ss_pred H-HHHhCCHHHHHHHHHHhHHHHH
Confidence 4 4567774445555555554443
No 275
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=77.80 E-value=22 Score=27.38 Aligned_cols=42 Identities=14% Similarity=0.001 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 027158 109 KQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYA 153 (227)
Q Consensus 109 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~ 153 (227)
..|+.+-.+.-...-.++..+..+|..+++.++ +.+|..+|-
T Consensus 119 ~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~---~~~Ae~H~i 160 (336)
T 3lpz_A 119 KEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGE---FEAAEKHLV 160 (336)
T ss_dssp HHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTC---HHHHHHHHT
T ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCC---HHHHHHHHH
Confidence 455555544222233679999999999999999 999998883
No 276
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=75.95 E-value=16 Score=24.81 Aligned_cols=60 Identities=8% Similarity=0.020 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---HHHHH---H-H--HHHHHHcCChHHHHHHHHHHHHH
Q 027158 28 RLEGILLEAKGLWAEAEKAYSSLLEDNPLD---PVLHK---R-R--VAIAKAQGNFPTAIEWLNKYLET 87 (227)
Q Consensus 28 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~---~-l--~~~~~~~~~~~~A~~~~~~~l~~ 87 (227)
+..+..+++.|+|=+|-+.++.+....+.. ...+. . + |......|+...|...+.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 455666777788888888888877765443 12222 2 2 22344567777777777777663
No 277
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=74.37 E-value=7.8 Score=32.89 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
.+.....|...+..|+|..|.++...++..+|++..+...++.+|.++|.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 34566778888899999999999999999999999999999999999885
No 278
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=73.91 E-value=21 Score=25.23 Aligned_cols=78 Identities=9% Similarity=0.098 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCC---------HHHHHHHHHHHHHcccHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCCCcHHH
Q 027158 79 EWLNKYLETFMAD---------HDAWRELAEIYVSLQMYKQAAFCYEELIL--SQPTVPLYHLAYADVLYTLGGVDNILL 147 (227)
Q Consensus 79 ~~~~~~l~~~p~~---------~~~~~~la~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~~~~ 147 (227)
..+++++..+-++ ...|...+..+ ..+....+..+|.-+.. +.-.....+...|..+...|+ +.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~---~~~ 133 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQF---FLE 133 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTC---HHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCC---HHH
Confidence 5677777654433 34677766665 23345677777776664 445667788888888888888 999
Q ss_pred HHHHHHHHhhhcC
Q 027158 148 AKKYYASTIDLTG 160 (227)
Q Consensus 148 A~~~~~~~~~~~~ 160 (227)
|...|+..++...
T Consensus 134 A~~Vy~~GI~~~A 146 (202)
T 3esl_A 134 AKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999998888764
No 279
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=71.76 E-value=10 Score=22.96 Aligned_cols=26 Identities=27% Similarity=0.271 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHH
Q 027158 60 LHKRRVAIAKAQGNFPTAIEWLNKYL 85 (227)
Q Consensus 60 ~~~~l~~~~~~~~~~~~A~~~~~~~l 85 (227)
.+...+..+...|+|++||++.+++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 34456666777777777777666554
No 280
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=70.92 E-value=14 Score=29.72 Aligned_cols=85 Identities=7% Similarity=0.045 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHcCC-------CH---------HHHHHHHHHHHHcccHHHHHHHHHHHHhhCC----------CCHH
Q 027158 74 FPTAIEWLNKYLETFMA-------DH---------DAWRELAEIYVSLQMYKQAAFCYEELILSQP----------TVPL 127 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~-------~~---------~~~~~la~~~~~~~~~~~A~~~~~~al~~~p----------~~~~ 127 (227)
.+++...+.+++..--+ .. .....+-.+|++.|+...|...++..-...+ +-..
T Consensus 142 le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~ 221 (455)
T 3t5v_B 142 LSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIE 221 (455)
T ss_dssp HHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEe
Confidence 55666667776665211 10 1234566889999999999888865543322 1135
Q ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh-cCC
Q 027158 128 YHLAYADVLYTLGGVDNILLAKKYYASTIDL-TGG 161 (227)
Q Consensus 128 ~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~-~~~ 161 (227)
+++.+|..+...++ |.+|.+++..|+.. .|.
T Consensus 222 Y~YYlGr~~~~~~~---y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 222 YRYLLGRYYLLNSQ---VHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHC
T ss_pred eeHHHHHHHHHHcc---HHHHHHHHHHHHHhcCCc
Confidence 78999999999999 99999999999999 774
No 281
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=69.82 E-value=28 Score=24.93 Aligned_cols=64 Identities=14% Similarity=0.252 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhCCCchhh--------HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 027158 7 DVAKDCIKVLQKQFPESKRV--------GRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKA 70 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~~~~~--------~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~ 70 (227)
+.|+.+++.+-...+-+... ......++...|.+++|.+.+++.+..+|.+......|..+-..
T Consensus 89 ESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 89 ESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 45666666666655421111 12233455666777777777777777655555555444444333
No 282
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=69.42 E-value=23 Score=23.96 Aligned_cols=60 Identities=7% Similarity=-0.026 Sum_probs=39.3
Q ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHH---HHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 96 RELAEIYVSLQMYKQAAFCYEELILSQPTV------PLYHL---AYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 96 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~---~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
+.-|..++..|+|=+|-++++.+-...+.. ...+. ..|..+...|+ ...|...+.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN---~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFED---DDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHH
Confidence 444555666677777777777777665443 11223 33445566788 99999999998774
No 283
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=68.64 E-value=7.4 Score=23.79 Aligned_cols=29 Identities=14% Similarity=0.022 Sum_probs=21.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 027158 28 RLEGILLEAKGLWAEAEKAYSSLLEDNPL 56 (227)
Q Consensus 28 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 56 (227)
..+|..+...|+++.|+.+|-+++..+|.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 34677777778888888877777777665
No 284
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=68.40 E-value=8.7 Score=23.48 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=16.3
Q ss_pred HHHHHHHHcccHHHHHHHHHHHHhhCCC
Q 027158 97 ELAEIYVSLQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~al~~~p~ 124 (227)
.+|..+...|+++.|+..|-+|+...|+
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4556666666666666655555555544
No 285
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=68.25 E-value=36 Score=26.62 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHc--CChHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 57 DPVLHKRRVAIAKAQ--GNFPTAIEWLNKYLET-----FMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~--~~~~~A~~~~~~~l~~-----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
.|.++.++|.+--.. .....++.+|.+++.. ...+...|..+|..+++.+++.+|+..+-.+-.
T Consensus 254 YPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 254 YPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 455566666654432 1222367777777764 234566778888899999999999988877653
No 286
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=64.50 E-value=32 Score=26.89 Aligned_cols=45 Identities=11% Similarity=-0.069 Sum_probs=34.5
Q ss_pred HHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 111 AAFCYEELILS-----QPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 111 A~~~~~~al~~-----~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
++.+|.+++.. ...+...+..+|..+++.++ +.+|+..+..+-+.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~---~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKK---YYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTC---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcch---HHHHHHHHHHHHHH
Confidence 66667777643 34556677888999999999 99999999887665
No 287
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=60.48 E-value=94 Score=27.78 Aligned_cols=111 Identities=9% Similarity=-0.061 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhCCCch--hhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 027158 8 VAKDCIKVLQKQFPESK--RVGRLEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYL 85 (227)
Q Consensus 8 ~A~~~~~~~~~~~p~~~--~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l 85 (227)
++...+..++....... .+-+.+|.++.-.|+-+....++..+.+...+...-...+|..+...|+.+.+....+...
T Consensus 472 ev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~~~li~~L~ 551 (963)
T 4ady_A 472 EVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKML 551 (963)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHHHHHHHHHH
Confidence 44555555554332111 2344566777777777666666666665433322223344444556677766666655544
Q ss_pred HHcCCCHH----HHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 86 ETFMADHD----AWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 86 ~~~p~~~~----~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
. + .++. +-..+|..|...|+...-..++..+..
T Consensus 552 ~-~-~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~ 588 (963)
T 4ady_A 552 A-S-DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVS 588 (963)
T ss_dssp H-C-SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred h-C-CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcc
Confidence 3 2 2332 334556667777886544446665554
No 288
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=60.44 E-value=10 Score=22.26 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=11.6
Q ss_pred HHHHHHHHcccHHHHHHHHHHHH
Q 027158 97 ELAEIYVSLQMYKQAAFCYEELI 119 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~al 119 (227)
.+|.-|...|+|+.|+.+|+.++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~ 39 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVL 39 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHH
Confidence 34444445555555555555544
No 289
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=59.59 E-value=38 Score=22.99 Aligned_cols=74 Identities=12% Similarity=0.192 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCCC---------HHHHHHHHHHHHHcccHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCCCcHH
Q 027158 78 IEWLNKYLETFMAD---------HDAWRELAEIYVSLQMYKQAAFCYEELIL--SQPTVPLYHLAYADVLYTLGGVDNIL 146 (227)
Q Consensus 78 ~~~~~~~l~~~p~~---------~~~~~~la~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~~~ 146 (227)
...+++++..+.++ ...|..++... ++ +..+|..+.. +.-.....+...|..+...|+ +.
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~---~~ 113 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLDMYSYLHNQGIGVSLAQFYISWAEEYEAREN---FR 113 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTC---HH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCC---HH
Confidence 55677777665443 33566665543 33 5555666553 445667788888888999999 99
Q ss_pred HHHHHHHHHhhhcC
Q 027158 147 LAKKYYASTIDLTG 160 (227)
Q Consensus 147 ~A~~~~~~~~~~~~ 160 (227)
+|...|+..++...
T Consensus 114 ~A~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 114 KADAIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999988764
No 290
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=58.89 E-value=64 Score=25.76 Aligned_cols=64 Identities=9% Similarity=0.047 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 57 DPVLHKRRVAIAKAQG--NFPTAIEWLNKYLET-----FMADHDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 57 ~~~~~~~l~~~~~~~~--~~~~A~~~~~~~l~~-----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
.|.++.+||.+.-..- ..+.++.+|++++.. ...+...|..+|-.+++.+++.+|+.++-.+-.
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 4555555555543321 223456777777764 234466778888888888999999888887753
No 291
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=58.86 E-value=45 Score=23.54 Aligned_cols=78 Identities=10% Similarity=-0.011 Sum_probs=57.4
Q ss_pred HHHHHHHhcC------CCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHH--cCCCHHHHHHHHHHHHHcccHHHHHH
Q 027158 45 KAYSSLLEDN------PLD---PVLHKRRVAIAKAQGNFPTAIEWLNKYLET--FMADHDAWRELAEIYVSLQMYKQAAF 113 (227)
Q Consensus 45 ~~~~~~l~~~------p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~--~p~~~~~~~~la~~~~~~~~~~~A~~ 113 (227)
.++++++... -+| ..+|..++..+ ..++..++...|.-.... ....+..|...|..+...|++.+|..
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 5677777752 233 35666666654 233456788888877654 45568899999999999999999999
Q ss_pred HHHHHHhhCC
Q 027158 114 CYEELILSQP 123 (227)
Q Consensus 114 ~~~~al~~~p 123 (227)
.|+.+++...
T Consensus 137 Vy~~GI~~~A 146 (202)
T 3esl_A 137 LLELGAENNC 146 (202)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999998764
No 292
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=56.84 E-value=71 Score=25.56 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=28.4
Q ss_pred HHHHHHHHHHH-----cCCCHHHHHHHHHHHHHcccHHHHHHHHHHHH
Q 027158 77 AIEWLNKYLET-----FMADHDAWRELAEIYVSLQMYKQAAFCYEELI 119 (227)
Q Consensus 77 A~~~~~~~l~~-----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al 119 (227)
++.+|.+++.. ...+...|..+|..+++.+++.+|+..+-.+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 56666666553 23345566777777788888888877776655
No 293
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=56.82 E-value=20 Score=25.26 Aligned_cols=37 Identities=16% Similarity=0.235 Sum_probs=19.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 027158 31 GILLEAKGLWAEAEKAYSSLLEDNPLDPVLHKRRVAI 67 (227)
Q Consensus 31 a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~ 67 (227)
..++...|.+++|.+.+++.+..++++......|..+
T Consensus 124 V~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 124 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 3456666777777777777766665555444444443
No 294
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=55.41 E-value=55 Score=23.50 Aligned_cols=50 Identities=12% Similarity=0.110 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Q 027158 75 PTAIEWLNKYLE--TFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 75 ~~A~~~~~~~l~--~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 124 (227)
+.+..+|.-+.. +....+..|...|..+...|++.+|..+|+.+++..-.
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 455666666654 34556888999999999999999999999999987644
No 295
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=55.32 E-value=26 Score=20.79 Aligned_cols=16 Identities=50% Similarity=0.694 Sum_probs=7.9
Q ss_pred HcccHHHHHHHHHHHH
Q 027158 104 SLQMYKQAAFCYEELI 119 (227)
Q Consensus 104 ~~~~~~~A~~~~~~al 119 (227)
..|+|++|+.+|..++
T Consensus 28 ~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 28 SESRYPQALVCYQEGI 43 (86)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 3455555555544444
No 296
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=52.96 E-value=1e+02 Score=27.60 Aligned_cols=21 Identities=0% Similarity=-0.154 Sum_probs=8.7
Q ss_pred HHHHHHHHcccHHHHHHHHHH
Q 027158 97 ELAEIYVSLQMYKQAAFCYEE 117 (227)
Q Consensus 97 ~la~~~~~~~~~~~A~~~~~~ 117 (227)
.+|.++...|+-+....++..
T Consensus 495 ALGli~vGTgn~~ai~~LL~~ 515 (963)
T 4ady_A 495 GMGLCMLGTGKPEAIHDMFTY 515 (963)
T ss_dssp HHHHHHTTCCCHHHHHHHHHH
T ss_pred HHhhhhcccCCHHHHHHHHHH
Confidence 444444444444433333333
No 297
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=51.89 E-value=65 Score=25.72 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 110 QAAFCYEELILS-----QPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 110 ~A~~~~~~al~~-----~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
.++.+|++|+.. ...+...+..+|..+++.++ +.+|+..+..+-+.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~---~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRN---VREALQAWADTATV 332 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTC---HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhh---HHHHHHHhhhhhhh
Confidence 355677777753 34456667788999999999 99999999888765
No 298
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=51.18 E-value=52 Score=22.00 Aligned_cols=75 Identities=17% Similarity=0.136 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCC---------HHHHHHHHHHHHHcccHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCCCcH
Q 027158 77 AIEWLNKYLETFMAD---------HDAWRELAEIYVSLQMYKQAAFCYEELIL--SQPTVPLYHLAYADVLYTLGGVDNI 145 (227)
Q Consensus 77 A~~~~~~~l~~~p~~---------~~~~~~la~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~~ 145 (227)
-...+++++..+.++ ...|...+... +.+..+|.-+.. +.-.....+...|..+...|+ +
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~---~ 117 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGE---L 117 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTC---H
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCC---H
Confidence 455667776665433 23555555432 236666766664 445667788888899999999 9
Q ss_pred HHHHHHHHHHhhhcC
Q 027158 146 LLAKKYYASTIDLTG 160 (227)
Q Consensus 146 ~~A~~~~~~~~~~~~ 160 (227)
.+|...|+..++...
T Consensus 118 ~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 118 QHASAVLQRGIQNQA 132 (152)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999998754
No 299
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=50.93 E-value=17 Score=21.25 Aligned_cols=27 Identities=26% Similarity=0.304 Sum_probs=23.7
Q ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHhhh
Q 027158 129 HLAYADVLYTLGGVDNILLAKKYYASTIDL 158 (227)
Q Consensus 129 ~~~la~~~~~~g~~~~~~~A~~~~~~~~~~ 158 (227)
...+|+=+...|+ |+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~Gn---Ydta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGN---YDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC---hHHHHHHHHHHHHH
Confidence 5678888999999 99999999998875
No 300
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=50.27 E-value=54 Score=27.81 Aligned_cols=47 Identities=15% Similarity=0.121 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccc
Q 027158 61 HKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQM 107 (227)
Q Consensus 61 ~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~ 107 (227)
....+...+..|++.-|.+..+.++..+|++..+...++.+|.+.|.
T Consensus 452 ~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 452 LLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 45567777889999999999999999999999999999999888764
No 301
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=49.08 E-value=1.7e+02 Score=27.34 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGILLE 35 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~~~~ 35 (227)
.+++.++|++++..+|++..++..+-..+.
T Consensus 1123 ~~~~~~~~~~l~~~~P~~l~~~~~~l~~l~ 1152 (1354)
T 3lxu_X 1123 LEMAEKIYNDVVAAHPKHLQANLLLIQNIE 1152 (1354)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCccHHHHHHHHHhhh
Confidence 467889999999999999888877666554
No 302
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=48.47 E-value=39 Score=19.85 Aligned_cols=14 Identities=21% Similarity=0.301 Sum_probs=5.9
Q ss_pred ccHHHHHHHHHHHH
Q 027158 106 QMYKQAAFCYEELI 119 (227)
Q Consensus 106 ~~~~~A~~~~~~al 119 (227)
|+|++|+.+|..++
T Consensus 27 g~y~eAl~~Y~~ai 40 (85)
T 2v6x_A 27 TQYEEAYTAYYNGL 40 (85)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 44444444443333
No 303
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=48.03 E-value=59 Score=21.69 Aligned_cols=125 Identities=10% Similarity=0.000 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHH--H---------HHHHHHH---------cCChHHHHHHHHHHHHHc
Q 027158 29 LEGILLEAKGLWAEAEKAYSSLLEDNPLDPVLHK--R---------RVAIAKA---------QGNFPTAIEWLNKYLETF 88 (227)
Q Consensus 29 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~--~---------l~~~~~~---------~~~~~~A~~~~~~~l~~~ 88 (227)
+-|.-+...|..++..+...+..+..|-...-|+ + +..++-. -|+....+.++-+.
T Consensus 12 meAK~~ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~---- 87 (172)
T 1wy6_A 12 MDAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVIN---- 87 (172)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHT----
T ss_pred HHHHHHHHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHh----
Confidence 3455566678899999998888876654322221 1 1111111 24555555555432
Q ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcC
Q 027158 89 MADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTG 160 (227)
Q Consensus 89 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~ 160 (227)
..+.+..-..-.....+|+-++-.+.+...+.-.+-++..+..+|.+|.+.|+ ..+|-+.+.++-+..-
T Consensus 88 n~~se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~---~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 88 NTLNEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGD---ERDATTLLIEACKKGE 156 (172)
T ss_dssp TCCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcc---hhhHHHHHHHHHHhhh
Confidence 22333333333456678888888888888777777789999999999999999 9999999999987643
No 304
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=47.27 E-value=41 Score=20.28 Aligned_cols=12 Identities=50% Similarity=1.010 Sum_probs=4.8
Q ss_pred ccHHHHHHHHHH
Q 027158 106 QMYKQAAFCYEE 117 (227)
Q Consensus 106 ~~~~~A~~~~~~ 117 (227)
|+|++|+.+|..
T Consensus 29 g~y~eAl~~Y~~ 40 (93)
T 1wfd_A 29 SRYQQALVCYQE 40 (93)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 344444443333
No 305
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=45.44 E-value=74 Score=25.40 Aligned_cols=46 Identities=24% Similarity=0.161 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 75 PTAIEWLNKYLETFMAD--------HDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~--------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
+..+..++.++..-|.. ..++..+|.+|+..|+|++|..+.++++.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34455555555554432 45778889999999999999999998885
No 306
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.54 E-value=27 Score=22.18 Aligned_cols=16 Identities=31% Similarity=0.304 Sum_probs=9.4
Q ss_pred hHHHHHHHHHHHHHcC
Q 027158 74 FPTAIEWLNKYLETFM 89 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p 89 (227)
+++|..++.++|.++-
T Consensus 19 h~~AF~~Is~AL~~DE 34 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDE 34 (116)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh
Confidence 4556666666666553
No 307
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=42.94 E-value=46 Score=21.11 Aligned_cols=15 Identities=20% Similarity=0.339 Sum_probs=7.4
Q ss_pred cccHHHHHHHHHHHH
Q 027158 105 LQMYKQAAFCYEELI 119 (227)
Q Consensus 105 ~~~~~~A~~~~~~al 119 (227)
.|+|++|+.+|..++
T Consensus 31 ag~y~eAl~lY~~Ai 45 (117)
T 2cpt_A 31 AGNYEEALQLYQHAV 45 (117)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 355555555544444
No 308
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=42.64 E-value=83 Score=25.18 Aligned_cols=46 Identities=24% Similarity=0.209 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 75 PTAIEWLNKYLETFMAD--------HDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~--------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
+..+..++.++..-|.. ..++..+|.+|+..|+|++|....++++.
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 34455555555554432 45788889999999999999999999885
No 309
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=41.22 E-value=77 Score=25.31 Aligned_cols=47 Identities=13% Similarity=0.026 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhCCC--------chhhHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 027158 7 DVAKDCIKVLQKQFPE--------SKRVGRLEGILLEAKGLWAEAEKAYSSLLED 53 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~--------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 53 (227)
+..+.-++.++...|. ...+..+++.+++..|+|++|....++++..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3344555555555442 2356788899999999999999999998863
No 310
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=40.91 E-value=1.1e+02 Score=24.84 Aligned_cols=31 Identities=10% Similarity=0.124 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELILSQ 122 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 122 (227)
..++..+|.+|+..|+|++|..+.++++...
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 4577889999999999999999999998653
No 311
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.85 E-value=1.3e+02 Score=23.54 Aligned_cols=85 Identities=14% Similarity=0.037 Sum_probs=55.2
Q ss_pred CChHHHHHHHHHHHHhC-------C----------CchhhHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCC---CH
Q 027158 4 QCLDVAKDCIKVLQKQF-------P----------ESKRVGRLEGILLEAKGLWAEAEKAYSSLLED-----NPL---DP 58 (227)
Q Consensus 4 ~~~~~A~~~~~~~~~~~-------p----------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~---~~ 58 (227)
.+.++|++.++++.... + ....+....+..+...|+.+.|...++++-.. +++ ..
T Consensus 90 ~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~ 169 (393)
T 4b4t_O 90 KDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITN 169 (393)
T ss_dssp TCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHH
Confidence 46677888887764322 0 11234456778888889999998888887543 111 12
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHc
Q 027158 59 VLHKRRVAIAKAQGNFPTAIEWLNKYLETF 88 (227)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~ 88 (227)
..+...+..+...+++..+....-.++...
T Consensus 170 ~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 170 SFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 445556677778888888777777766543
No 312
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=46.52 E-value=5.9 Score=33.69 Aligned_cols=48 Identities=19% Similarity=0.110 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 94 AWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 94 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
.....|...+..|+|..|.++.+.++..+|++..+...++.+|.++|.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~ 510 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGY 510 (668)
Confidence 344567777889999999999999999999999999999999999885
No 313
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=40.10 E-value=96 Score=25.11 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLEDN 54 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~ 54 (227)
.++.++|.+++..++|++|....++++...
T Consensus 204 aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 204 VVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 467788899999999999999999888753
No 314
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=39.97 E-value=67 Score=20.00 Aligned_cols=71 Identities=17% Similarity=0.036 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHH
Q 027158 39 LWAEAEKAYSSLLEDNPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCY 115 (227)
Q Consensus 39 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~ 115 (227)
..++|..+. ..+...+....+-..+...+...|+|++|..+.+... .|+.-..++.+-.+.|.-+++...+
T Consensus 22 ~HqEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL 92 (116)
T 2p58_C 22 YHEEANCIA-EWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGSALESRL 92 (116)
T ss_dssp CHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHH
Confidence 344444332 2333344433333344455667777777776665432 3444444555666666666666655
No 315
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=39.96 E-value=66 Score=19.97 Aligned_cols=48 Identities=13% Similarity=-0.044 Sum_probs=25.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcccHHHHHHHH
Q 027158 63 RRVAIAKAQGNFPTAIEWLNKYLETFMADHDAWRELAEIYVSLQMYKQAAFCY 115 (227)
Q Consensus 63 ~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~ 115 (227)
.+...+...|+|++|..+.+... .|+.-..++.+-.+.|.-+++...+
T Consensus 44 IR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL 91 (115)
T 2uwj_G 44 IRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAALDRRL 91 (115)
T ss_dssp HHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHH
Confidence 34445556666666665554321 3344444455555566666655555
No 316
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=39.83 E-value=57 Score=19.17 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=12.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHh
Q 027158 31 GILLEAKGLWAEAEKAYSSLLE 52 (227)
Q Consensus 31 a~~~~~~~~~~~A~~~~~~~l~ 52 (227)
|...-..|++++|+.+|..+++
T Consensus 26 Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 26 AVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHH
Confidence 3344455666666666655554
No 317
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=37.41 E-value=66 Score=19.21 Aligned_cols=27 Identities=7% Similarity=0.100 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHhCCCchhhHHHHHH
Q 027158 6 LDVAKDCIKVLQKQFPESKRVGRLEGI 32 (227)
Q Consensus 6 ~~~A~~~~~~~~~~~p~~~~~~~~~a~ 32 (227)
++.|+.+++++...+.+.+..+...-.
T Consensus 10 ~~~A~~YvnkVK~rF~~~p~~Y~~FL~ 36 (89)
T 1g1e_B 10 FNHAINYVNKIKNRFQGQPDIYKAFLE 36 (89)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHH
Confidence 456677777777766666655544433
No 318
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=36.89 E-value=88 Score=25.03 Aligned_cols=46 Identities=13% Similarity=-0.007 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhCCC--------chhhHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 027158 8 VAKDCIKVLQKQFPE--------SKRVGRLEGILLEAKGLWAEAEKAYSSLLED 53 (227)
Q Consensus 8 ~A~~~~~~~~~~~p~--------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 53 (227)
..+.-++.++...|. ...++.++|.+++..|+|++|....++++..
T Consensus 172 ~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 172 EIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 344455555554442 2356788899999999999999999998863
No 319
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=35.78 E-value=98 Score=24.86 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 76 TAIEWLNKYLETFMAD--------HDAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 76 ~A~~~~~~~l~~~p~~--------~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
..+..++.++..-|.. ..++..+|.+|+..|+|++|....++++..
T Consensus 178 ~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 178 QVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3444455555443432 457788899999999999999999999864
No 320
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=34.90 E-value=69 Score=18.72 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=12.1
Q ss_pred HHHHHcCCHHHHHHHHHHHHh
Q 027158 32 ILLEAKGLWAEAEKAYSSLLE 52 (227)
Q Consensus 32 ~~~~~~~~~~~A~~~~~~~l~ 52 (227)
.-.-..|++++|+.+|..+++
T Consensus 19 ve~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 19 VKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHH
Confidence 334455666666666665554
No 321
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.45 E-value=94 Score=24.97 Aligned_cols=46 Identities=9% Similarity=0.017 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCC--------chhhHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 027158 8 VAKDCIKVLQKQFPE--------SKRVGRLEGILLEAKGLWAEAEKAYSSLLED 53 (227)
Q Consensus 8 ~A~~~~~~~~~~~p~--------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 53 (227)
..+.-++.++...|. ...++.++|.+++..|+|++|....++++..
T Consensus 178 ~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 178 QVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 344455555555442 2356788999999999999999999999864
No 322
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=34.07 E-value=59 Score=17.65 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=14.0
Q ss_pred CHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCChHHHH
Q 027158 39 LWAEAEKAYSSLLEDNPLDP-VLHKRRVAIAKAQGNFPTAI 78 (227)
Q Consensus 39 ~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~~~~~~~A~ 78 (227)
..++|... -..+...+... .+-..+...+...|+|++|+
T Consensus 21 cH~EA~tI-A~~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 21 CHQEAASI-ADWLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp CHHHHHHH-HHHHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 34555433 23334444433 23334445566777777664
No 323
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=33.20 E-value=1.9e+02 Score=23.23 Aligned_cols=66 Identities=8% Similarity=-0.168 Sum_probs=43.6
Q ss_pred CchhhHHHHHHHHHHcCCH--HHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 027158 22 ESKRVGRLEGILLEAKGLW--AEAEKAYSSLLED-----NPLDPVLHKRRVAIAKAQGNFPTAIEWLNKYLET 87 (227)
Q Consensus 22 ~~~~~~~~~a~~~~~~~~~--~~A~~~~~~~l~~-----~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~ 87 (227)
..|.++-.+|.+-...--. ..++.+|.+++.. .-.+...|..+|-.+++.+++.+|+..+-.+-..
T Consensus 275 rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 3455555555555443211 1366677777664 3345667788888999999999999998887654
No 324
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.10 E-value=1.7e+02 Score=22.79 Aligned_cols=90 Identities=9% Similarity=0.041 Sum_probs=60.5
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcC-------C--------CC--HHHHHHHHHHHHHcCChHHHHHHHHHHHHHc-----
Q 027158 31 GILLEAKGLWAEAEKAYSSLLEDN-------P--------LD--PVLHKRRVAIAKAQGNFPTAIEWLNKYLETF----- 88 (227)
Q Consensus 31 a~~~~~~~~~~~A~~~~~~~l~~~-------p--------~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~----- 88 (227)
..+.....+.++|.+++.+..... + .. ..+...++..+...|+.++|...++++-..-
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~ 162 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDS 162 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCC
Confidence 345566788999999988764431 0 11 3455677788889999999999998876431
Q ss_pred CC---CHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 89 MA---DHDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 89 p~---~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
++ ....+...+..+...+++..+...+-..+.
T Consensus 163 ~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 163 IPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 11 133455567777778888887776666664
No 325
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=31.25 E-value=1.5e+02 Score=21.32 Aligned_cols=74 Identities=12% Similarity=0.217 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCC---------HHHHHHHHHHHHHcccHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCCCcHHH
Q 027158 79 EWLNKYLETFMAD---------HDAWRELAEIYVSLQMYKQAAFCYEELIL--SQPTVPLYHLAYADVLYTLGGVDNILL 147 (227)
Q Consensus 79 ~~~~~~l~~~p~~---------~~~~~~la~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~~~~ 147 (227)
..+++++..+.++ ...|..++.. . +.+..+|.-+.. +.-.....+...|..+...|+ +.+
T Consensus 98 ~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~---~---~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~---~~~ 168 (223)
T 4aez_C 98 TLLERCTREFVRNPLYKDDVRYLRIWMQYVNY---I---DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGL---FQK 168 (223)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT---C---SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTC---HHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHc---c---CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCC---HHH
Confidence 4555555544333 3456666653 1 355566666664 456678889999999999999 999
Q ss_pred HHHHHHHHhhhcCC
Q 027158 148 AKKYYASTIDLTGG 161 (227)
Q Consensus 148 A~~~~~~~~~~~~~ 161 (227)
|...|+..++..-.
T Consensus 169 A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 169 ADEVYQKGKRMKAK 182 (223)
T ss_dssp HHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHcCCc
Confidence 99999999998753
No 326
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=30.80 E-value=1.5e+02 Score=21.28 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHcCCCHHH--------HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 027158 74 FPTAIEWLNKYLETFMADHDA--------WRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGG 141 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~~~~--------~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 141 (227)
.+.|+..++..-+-.+-+... -...-.++++.|.|++|.+.+++.+.-+|.+......|..+-.....
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~ 163 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNL 163 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCc
Confidence 567888888777666543322 22344567889999999999999998877777777777766655543
No 327
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=27.71 E-value=2.8e+02 Score=23.57 Aligned_cols=21 Identities=10% Similarity=-0.058 Sum_probs=12.4
Q ss_pred HHcccHHHHHHHHHHHHhhCCC
Q 027158 103 VSLQMYKQAAFCYEELILSQPT 124 (227)
Q Consensus 103 ~~~~~~~~A~~~~~~al~~~p~ 124 (227)
+..|+|+.|+..+++ +.+-|.
T Consensus 549 ~~~g~~~~AL~~i~~-L~llPl 569 (661)
T 2qx5_A 549 YFNKQWQETLSQMEL-LDLLPF 569 (661)
T ss_dssp HHTTCHHHHHHHHHH-TSCSCC
T ss_pred HHcCCHHHHHHHHHh-CCCCCC
Confidence 556666666666666 344454
No 328
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.29 E-value=1.9e+02 Score=23.21 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 027158 25 RVGRLEGILLEAKGLWAEAEKAYSSLLED 53 (227)
Q Consensus 25 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 53 (227)
.++.++|.+++..|+|++|....++++..
T Consensus 198 aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 198 SAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 46778999999999999999999999864
No 329
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=27.00 E-value=57 Score=22.98 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=10.6
Q ss_pred HHHHcCChHHHHHHHHHHHHHcCCC
Q 027158 67 IAKAQGNFPTAIEWLNKYLETFMAD 91 (227)
Q Consensus 67 ~~~~~~~~~~A~~~~~~~l~~~p~~ 91 (227)
+++..|.+++|.+.+++.+..++.+
T Consensus 126 VCiekg~Fk~A~eiLkr~f~~~~~~ 150 (211)
T 3bqo_A 126 VCMENGNFKEAEEVFERIFGDPNSH 150 (211)
T ss_dssp HHHHTTCHHHHHHHHHHHC-----C
T ss_pred HHHHccchHHHHHHHHHHhcCCCCc
Confidence 4455555555555555555444443
No 330
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=26.35 E-value=2.1e+02 Score=23.18 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
..++..+|.+|+..++|++|...+++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347778888888888888888888888753
No 331
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=26.18 E-value=1.3e+02 Score=19.29 Aligned_cols=18 Identities=17% Similarity=0.119 Sum_probs=9.5
Q ss_pred HHHHcCChHHHHHHHHHH
Q 027158 67 IAKAQGNFPTAIEWLNKY 84 (227)
Q Consensus 67 ~~~~~~~~~~A~~~~~~~ 84 (227)
+++..++.+..+..++..
T Consensus 49 lyf~~~n~~~m~~~L~pL 66 (126)
T 2npu_A 49 LYFGERNVKGMFEVLEPL 66 (126)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHhcccCHHHHHHHHHHH
Confidence 444555555555555444
No 332
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=25.55 E-value=1.9e+02 Score=23.51 Aligned_cols=46 Identities=9% Similarity=0.047 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCC-----------chhhHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 027158 8 VAKDCIKVLQKQFPE-----------SKRVGRLEGILLEAKGLWAEAEKAYSSLLED 53 (227)
Q Consensus 8 ~A~~~~~~~~~~~p~-----------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 53 (227)
..++-++.++...|. ...++.+++.+++..++|++|....++++..
T Consensus 155 ~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 155 FILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555555442 2246788999999999999999999999864
No 333
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=24.17 E-value=1.4e+02 Score=24.02 Aligned_cols=46 Identities=20% Similarity=0.198 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhCCC--------chhhHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 027158 7 DVAKDCIKVLQKQFPE--------SKRVGRLEGILLEAKGLWAEAEKAYSSLLE 52 (227)
Q Consensus 7 ~~A~~~~~~~~~~~p~--------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 52 (227)
+..++-++.++...|. ...++.++|.+++..++|++|....++++.
T Consensus 155 ~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 155 AQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3344555555555542 234678899999999999999999999885
No 334
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.55 E-value=1.3e+02 Score=18.10 Aligned_cols=45 Identities=18% Similarity=0.162 Sum_probs=26.0
Q ss_pred HHHHHHHcCCCCcHHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHh
Q 027158 132 YADVLYTLGGVDNILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQ 179 (227)
Q Consensus 132 la~~~~~~g~~~~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (227)
-|..++..|+ |=+|-+.++..+...|+.....+.|++.+...+-.
T Consensus 7 ~~~~lfn~g~---~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h 51 (94)
T 2cwy_A 7 EVLGLWRAGR---YYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQ 51 (94)
T ss_dssp HHHHHHHTTC---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC---hHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 3455566677 77777777777776654334444455554444443
No 335
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=23.49 E-value=2.2e+02 Score=20.92 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=26.3
Q ss_pred chhhHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 027158 23 SKRVGRLEGILLEAKGLWAEAEKAYSSLLEDNPL 56 (227)
Q Consensus 23 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 56 (227)
+..-+..++.+..+.++|++.+.+.+++...++.
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~e 63 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVE 63 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 3455677788888889999888888888887654
No 336
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.82 E-value=2.1e+02 Score=22.89 Aligned_cols=30 Identities=23% Similarity=0.123 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Q 027158 92 HDAWRELAEIYVSLQMYKQAAFCYEELILS 121 (227)
Q Consensus 92 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 121 (227)
..++..+|.+|+..|+|++|..+.++++..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 347788999999999999999999999864
No 337
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.55 E-value=1.5e+02 Score=23.92 Aligned_cols=46 Identities=24% Similarity=0.211 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Q 027158 75 PTAIEWLNKYLETFMAD--------HDAWRELAEIYVSLQMYKQAAFCYEELIL 120 (227)
Q Consensus 75 ~~A~~~~~~~l~~~p~~--------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 120 (227)
+..+..++.++..-|.. ..++..+|.+|+..++|++|...+++++.
T Consensus 155 ~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 155 AQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34455555565554431 44778889999999999999999988874
No 338
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.14 E-value=1.1e+02 Score=24.59 Aligned_cols=31 Identities=26% Similarity=0.251 Sum_probs=26.9
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 027158 24 KRVGRLEGILLEAKGLWAEAEKAYSSLLEDN 54 (227)
Q Consensus 24 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~ 54 (227)
..+..++|.+++..++|++|....++++...
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3567889999999999999999999999753
No 339
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=21.35 E-value=2.3e+02 Score=21.15 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc------------------------ccHHHHHHHHHHHHhhCC------
Q 027158 74 FPTAIEWLNKYLETFMADHDAWRELAEIYVSL------------------------QMYKQAAFCYEELILSQP------ 123 (227)
Q Consensus 74 ~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~------------------------~~~~~A~~~~~~al~~~p------ 123 (227)
++.|++-.+-.++.+|+++.....++.+.+.. ...++|..+++..-+..|
T Consensus 101 FDaALERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~~Laqk~~e~~t~~ 180 (346)
T 3qtm_A 101 IDAAIERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLRPLAQDSTEYFDAL 180 (346)
T ss_dssp HHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHHHHHSTTSCCCTTC
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHHHHHhhChhhcccc
Confidence 45566666666667888888777777776643 345677778875544333
Q ss_pred --CCHHHHHHHHHHHHHcC
Q 027158 124 --TVPLYHLAYADVLYTLG 140 (227)
Q Consensus 124 --~~~~~~~~la~~~~~~g 140 (227)
+.....+.+...+..-|
T Consensus 181 tld~~rpl~~lS~yl~~~~ 199 (346)
T 3qtm_A 181 TPDSLRPLYILSSYLFQFG 199 (346)
T ss_dssp CTTTTTTHHHHHHHHHHTG
T ss_pred ccchhhHHHHHHHHHHHhc
Confidence 22234555555555544
No 340
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=20.53 E-value=1.6e+02 Score=19.92 Aligned_cols=49 Identities=12% Similarity=-0.080 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHhhhcCC
Q 027158 110 QAAFCYEELILSQPTVPLYHLAYADVLYTLGGVDNILLAKKYYASTIDLTGG 161 (227)
Q Consensus 110 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~~~~A~~~~~~~~~~~~~ 161 (227)
.|...+..+...+|.-....-.+..++....+ ....+..|...+..+|.
T Consensus 74 ~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d---~~~~L~~y~~~le~DP~ 122 (175)
T 4abx_A 74 EAVRALNAGAKYDETVMQLQNELRAALESVQA---IAGELRDVAEGSAADPE 122 (175)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH---HHHHHHHHHHcCCCCHH
Confidence 45555555555666555566667777777666 66666666666666663
No 341
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=20.23 E-value=1.5e+02 Score=18.35 Aligned_cols=31 Identities=19% Similarity=0.159 Sum_probs=20.9
Q ss_pred CchhhHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 027158 22 ESKRVGRLEGILLEAKGLWAEAEKAYSSLLE 52 (227)
Q Consensus 22 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 52 (227)
.+.+....-+.-..+.|+|++|.+.++++-+
T Consensus 18 G~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 18 GDARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3455566666677777888888777766543
No 342
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=20.14 E-value=2.8e+02 Score=20.73 Aligned_cols=57 Identities=11% Similarity=0.136 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhhhcCCCchhHHHhHHHHHHHHHhhhcCCCccccchHHHHHHHHHHHHHHHH
Q 027158 145 ILLAKKYYASTIDLTGGKNTKALFGICLCSSAIAQLTKGRNKEDKESPELQSLAAAALEKDYK 207 (227)
Q Consensus 145 ~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (227)
...|+..+...--++. .+..+..++-....+++.- +.+.+.++....+...|++.-.
T Consensus 272 L~~aid~~~~~y~ldk--~~e~l~~lAd~kmdlan~~----~~Ed~Qdk~l~EA~~~ireAq~ 328 (346)
T 3qtm_A 272 LNNSVDTWNVIYTLDK--SPERLLKLADIKMDLAQIV----QDEASQDNYLKEACNAIKEAQG 328 (346)
T ss_dssp HHHHHHHHHHHHHHSC--CGGGHHHHHHHHHHHHHHC----SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CHHHHHHHHHHHHHHHHHc----cChhhHHHHHHHHHHHHHHHHh
Confidence 6778888877765655 4456667777777776643 2224456677778888887765
Done!