Query 027159
Match_columns 227
No_of_seqs 213 out of 1178
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 09:14:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027159.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027159hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ctda_ a.39.1.5 (A:) Troponin 39.6 22 0.0016 18.1 3.6 28 166-195 2-29 (34)
2 d2axtl1 f.23.31.1 (L:1-37) Pho 35.2 18 0.0013 18.9 2.8 18 12-29 18-35 (37)
3 d1qx2a_ a.39.1.1 (A:) Calbindi 28.9 24 0.0017 21.1 3.2 14 163-176 22-35 (76)
4 d2qqra2 b.34.9.1 (A:956-1011) 27.2 10 0.00073 22.3 1.0 18 207-224 39-56 (56)
5 d1cb1a_ a.39.1.1 (A:) Calbindi 26.7 31 0.0023 20.8 3.5 14 163-176 24-37 (78)
6 d1tiza_ a.39.1.5 (A:) Calmodul 24.7 37 0.0027 19.5 3.5 11 165-175 34-44 (67)
7 d1fw4a_ a.39.1.5 (A:) Calmodul 23.7 19 0.0014 20.8 1.9 36 160-201 15-50 (65)
8 d2yzia1 d.37.1.1 (A:4-135) Unc 23.3 15 0.0011 24.4 1.6 23 202-226 68-90 (132)
9 d1wmib1 a.137.13.1 (B:7-67) Hy 21.7 35 0.0025 19.2 2.6 22 157-178 22-43 (61)
10 d1jr1a4 d.37.1.1 (A:113-232) T 21.5 6.3 0.00046 26.2 -0.9 25 202-226 59-83 (120)
11 d2craa1 a.4.1.1 (A:7-64) Homeo 21.3 47 0.0034 19.0 3.4 43 161-207 4-46 (58)
12 d2ou3a1 a.287.1.1 (A:1-160) Te 20.6 79 0.0058 21.4 5.2 17 183-199 41-57 (160)
13 d1p7ia_ a.4.1.1 (A:) Engrailed 20.1 37 0.0027 19.0 2.6 40 164-207 5-44 (53)
No 1
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=39.60 E-value=22 Score=18.15 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=14.3
Q ss_pred cHHHHHHHHHHhccccCCCCCCChhHHHHH
Q 027159 166 RRAELKTLVNLHGNEAGKGGELTHDETTII 195 (227)
Q Consensus 166 s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi 195 (227)
|+||+......-. -..+|-||.+|-..|
T Consensus 2 sEeELae~FRifD--kNaDGyiD~eEl~~i 29 (34)
T d1ctda_ 2 SEEELANAFRIFD--KNADGYIDIEELGEI 29 (34)
T ss_dssp HHHHHHHHHHTTC--CSSSSCBCHHHHHHH
T ss_pred CHHHHHHHHHHHc--cCCcccccHHHHHHH
Confidence 4566665555432 123466666664433
No 2
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=35.17 E-value=18 Score=18.89 Aligned_cols=18 Identities=11% Similarity=0.573 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 027159 12 FIIHIVVIVFLVMFAGLM 29 (227)
Q Consensus 12 ~~~~i~~~~~ll~~sa~f 29 (227)
+|.+++++++.+++|.+|
T Consensus 18 y~GlLlifvl~vLFssYf 35 (37)
T d2axtl1 18 YLGLLLILVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 455566666667776655
No 3
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}
Probab=28.87 E-value=24 Score=21.06 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=9.4
Q ss_pred ccccHHHHHHHHHH
Q 027159 163 ALFRRAELKTLVNL 176 (227)
Q Consensus 163 ~~~s~eEl~~lv~~ 176 (227)
..+|.+|++.++..
T Consensus 22 G~I~~~El~~~l~~ 35 (76)
T d1qx2a_ 22 NQISKEELKLVMQT 35 (76)
T ss_dssp TSEEHHHHHHHHHH
T ss_pred CEECHHHHHHHHHH
Confidence 45777777777763
No 4
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.24 E-value=10 Score=22.25 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=14.9
Q ss_pred cccccccceeEEeeCCCC
Q 027159 207 SDAMTPIAETFAIDINAK 224 (227)
Q Consensus 207 ~eiM~PR~di~~i~~~~~ 224 (227)
.++|+-|+||++++.+.|
T Consensus 39 Sql~vKR~dIytl~EeLP 56 (56)
T d2qqra2 39 SQLVVKRDDVYTLDEELP 56 (56)
T ss_dssp CEEEECGGGEEETTSCCC
T ss_pred cEEEEehhHeecccccCC
Confidence 468999999999988754
No 5
>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}
Probab=26.71 E-value=31 Score=20.76 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=10.0
Q ss_pred ccccHHHHHHHHHH
Q 027159 163 ALFRRAELKTLVNL 176 (227)
Q Consensus 163 ~~~s~eEl~~lv~~ 176 (227)
..+|.+|++.++..
T Consensus 24 g~is~~Elk~ll~~ 37 (78)
T d1cb1a_ 24 NQLSKEELKQLIQA 37 (78)
T ss_dssp TEECHHHHHHHHHH
T ss_pred CEECHHHHHHHHHH
Confidence 46777888777763
No 6
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.75 E-value=37 Score=19.52 Aligned_cols=11 Identities=9% Similarity=0.462 Sum_probs=5.2
Q ss_pred ccHHHHHHHHH
Q 027159 165 FRRAELKTLVN 175 (227)
Q Consensus 165 ~s~eEl~~lv~ 175 (227)
.|++|++.+++
T Consensus 34 ~~~~~i~~~~~ 44 (67)
T d1tiza_ 34 FTQEDIVKFFE 44 (67)
T ss_dssp SCHHHHHHHHH
T ss_pred cchHHHHHHHH
Confidence 34444554444
No 7
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.66 E-value=19 Score=20.82 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=19.9
Q ss_pred CCcccccHHHHHHHHHHhccccCCCCCCChhHHHHHHhhhcc
Q 027159 160 GRVALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALEL 201 (227)
Q Consensus 160 ~~~~~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~v~~f 201 (227)
+.+..++.+|++.++...+ -.++++|-+.+-+.++.
T Consensus 15 d~~G~I~~~el~~~l~~lg------~~~~~~e~~~l~~~~D~ 50 (65)
T d1fw4a_ 15 DGNGYISAAELRHVMTNLG------EKLTDEEVDEMIREADI 50 (65)
T ss_dssp TCSSEECHHHHHHHHHHTT------CCCCHHHHHHHHHTTCT
T ss_pred CCCCcCCHHHHHHHHHHhC------CCCCHHHHHHHHHHcCC
Confidence 3445678888888776421 23555554444444443
No 8
>d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=23.25 E-value=15 Score=24.38 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=17.6
Q ss_pred ccccccccccccceeEEeeCCCCCC
Q 027159 202 TEKTASDAMTPIAETFAIDINAKLD 226 (227)
Q Consensus 202 ~~~~v~eiM~PR~di~~i~~~~~~~ 226 (227)
.+.+++++|.| ++.+++.++++.
T Consensus 68 ~~~~v~~im~~--~~~~v~~~~~~~ 90 (132)
T d2yzia1 68 YDIPVERIMTR--NLITANVNTPLG 90 (132)
T ss_dssp TTSBGGGTCBC--SCCEEETTSBHH
T ss_pred cceeEeecccc--cccccCcchHHH
Confidence 35789999986 577888887754
No 9
>d1wmib1 a.137.13.1 (B:7-67) Hypothetical protein PHS014 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.69 E-value=35 Score=19.17 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=16.6
Q ss_pred hcCCCcccccHHHHHHHHHHhc
Q 027159 157 LGHGRVALFRRAELKTLVNLHG 178 (227)
Q Consensus 157 ~g~~~~~~~s~eEl~~lv~~~~ 178 (227)
.+.+.+..+|++||..+++.+.
T Consensus 22 mpeerdediteeeiaellelar 43 (61)
T d1wmib1 22 MPEERDEDITEEEIAELLELAR 43 (61)
T ss_dssp SCBCCCTTCCHHHHHHHHHHHT
T ss_pred CchhccccccHHHHHHHHHHHh
Confidence 3444456789999999999754
No 10
>d1jr1a4 d.37.1.1 (A:113-232) Type II inosine monophosphate dehydrogenase CBS domains {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=21.52 E-value=6.3 Score=26.17 Aligned_cols=25 Identities=12% Similarity=0.150 Sum_probs=15.8
Q ss_pred ccccccccccccceeEEeeCCCCCC
Q 027159 202 TEKTASDAMTPIAETFAIDINAKLD 226 (227)
Q Consensus 202 ~~~~v~eiM~PR~di~~i~~~~~~~ 226 (227)
.+.++.++|+++.++++++.+++++
T Consensus 59 ~~~~~~~~~~~~~~~~~v~~~~~~~ 83 (120)
T d1jr1a4 59 HDRFLEEIMTKREDLVVAPAGITLK 83 (120)
T ss_dssp -------CCSBTTTSCCEETTCCHH
T ss_pred cCceeEEEEeeccCceEECCCCCHH
Confidence 4678999999999999999988754
No 11
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.31 E-value=47 Score=19.00 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=30.1
Q ss_pred CcccccHHHHHHHHHHhccccCCCCCCChhHHHHHHhhhcccccccc
Q 027159 161 RVALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTAS 207 (227)
Q Consensus 161 ~~~~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~v~~f~~~~v~ 207 (227)
....+|.+++..|=..= .+....+.++++.|..-+.+++..|+
T Consensus 4 ~Rt~ft~~Q~~~Le~~F----~~~~yp~~~~r~~LA~~l~l~~~qV~ 46 (58)
T d2craa1 4 KRIPYSKGQLRELEREY----AANKFITKDKRRKISAATSLSERQIT 46 (58)
T ss_dssp SCCCSCHHHHHHHHHHH----HHCSSCCHHHHHHHHHHTCCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHH----hhcCCCCHHHHHHHHHHcCCCHHHee
Confidence 33457877777654421 23467889999999999998887664
No 12
>d2ou3a1 a.287.1.1 (A:1-160) Tellurite resistance protein of COG3793 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}
Probab=20.62 E-value=79 Score=21.39 Aligned_cols=17 Identities=18% Similarity=0.257 Sum_probs=13.9
Q ss_pred CCCCCChhHHHHHHhhh
Q 027159 183 KGGELTHDETTIIAGAL 199 (227)
Q Consensus 183 ~~g~l~~~E~~mi~~v~ 199 (227)
-+|.++++|.++|.+.+
T Consensus 41 aDG~v~~~E~~~i~~~~ 57 (160)
T d2ou3a1 41 ADGVISPEEKDWALGFC 57 (160)
T ss_dssp SSSCCCHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHH
Confidence 45899999999888765
No 13
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=20.05 E-value=37 Score=18.98 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=29.7
Q ss_pred cccHHHHHHHHHHhccccCCCCCCChhHHHHHHhhhcccccccc
Q 027159 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTAS 207 (227)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~v~~f~~~~v~ 207 (227)
.+|.+++..|-..= .+....+.++++.|.+-+.+++..|+
T Consensus 5 ~ft~~Q~~~Le~~F----~~~~yp~~~~r~~LA~~lgL~~~qV~ 44 (53)
T d1p7ia_ 5 AFSSEQLARLKREF----NENRYLTERRRQQLSSELGLNEAQIK 44 (53)
T ss_dssp CCCHHHHHHHHHHH----HHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred cCCHHHHHHHHHHH----HHCCCCCHHHHHHHHHHhCCChHHhh
Confidence 46777777665432 23467889999999999999888774
Done!