BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027165
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SW70|SRP_VITRI Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1
Length = 248
Score = 303 bits (776), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 183/243 (75%), Gaps = 24/243 (9%)
Query: 1 MSDSEAKQLTETRTEADEKRLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVE 60
M++SEAKQ ET +EKRLKYLDFVQVAAIY+IVCFS++YEYAKE+SGPLKPGVQ VE
Sbjct: 1 MAESEAKQQPET-VHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVE 59
Query: 61 ATVKTVLGPIYEDLHDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQ---------- 110
TVKTV+GP+YE +DVPFELL FVDRKVE S+ ELERHVPSLVK+AS Q
Sbjct: 60 GTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPE 119
Query: 111 -ARAMAFEVQRVGVVDAATTIMNSMY-----------SKYEQVAEQYALSAWRWLNRLPV 158
A A+A EVQR GVVD A I ++Y SKYE VAEQYA+SAWR LNRLP+
Sbjct: 120 LALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPL 179
Query: 159 FPQVAQIVIPTAACWSEKYNQLVRCTEERGYPIATYLPLIPTERIAKVFDEGPT-PTVPI 217
FPQVAQ+V+PTAA WSEKYNQ V T ERGY +A YLPLIPTERIAKVF +G PTV
Sbjct: 180 FPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQDGSALPTVET 239
Query: 218 DGK 220
+G
Sbjct: 240 NGN 242
>sp|O82246|Y2778_ARATH REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana
GN=At2g47780 PE=2 SV=1
Length = 235
Score = 230 bits (586), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 145/196 (73%)
Query: 15 EADEKRLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPIYEDL 74
+ DE +LK+L+F+QVAA+Y CFST+YE AK+++GPLK GV+ +E V+TVL P+YE
Sbjct: 35 DDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKF 94
Query: 75 HDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNSM 134
HDVPF+LL FVDRKV++ ++E +VPSLVKQASSQA +A EVQR GVVD +I S+
Sbjct: 95 HDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSV 154
Query: 135 YSKYEQVAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKYNQLVRCTEERGYPIATY 194
KYE AE YA + WR LN+LP+FP+VA +VIPTA WSEKYN VR +R Y A Y
Sbjct: 155 RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEY 214
Query: 195 LPLIPTERIAKVFDEG 210
LP+IP E+I+ + ++
Sbjct: 215 LPMIPIEKISDILEQD 230
>sp|Q9MA63|Y3550_ARATH REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana
GN=At3g05500 PE=2 SV=1
Length = 246
Score = 213 bits (543), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 158/227 (69%), Gaps = 22/227 (9%)
Query: 14 TEADEKRLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPIYED 73
T+ +++RLKYL FVQ AA+ ++ F+ +Y AK+ SGPLKPGV++VE VKTV+GP+YE
Sbjct: 15 TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEK 74
Query: 74 LHDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQ-----------ARAMAFEVQRVG 122
HDVP E+L+++D+KV+ S+ EL+R VP +VKQ S+Q ARA+A EV+R G
Sbjct: 75 YHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAG 134
Query: 123 VVDAATTIMNSMYSKYEQV-----------AEQYALSAWRWLNRLPVFPQVAQIVIPTAA 171
VV+ A+ + S+YSKYE AEQ A+SAW+ LN+LP+FP++AQ+ +PTAA
Sbjct: 135 VVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAA 194
Query: 172 CWSEKYNQLVRCTEERGYPIATYLPLIPTERIAKVFDEGPTPTVPID 218
SEKYN V E+GY + +Y+PL+PTERI+K+F E T P++
Sbjct: 195 FCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPLE 241
>sp|O82803|SRPP_HEVBR Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1
SV=1
Length = 204
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 142/203 (69%), Gaps = 13/203 (6%)
Query: 15 EADEKRLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPIYEDL 74
E +E+RLKYLDFV+ A +Y + FST+Y YAK+ SGPLKPGV +E VKTV+ P+Y
Sbjct: 4 EVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY-- 61
Query: 75 HDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNS- 133
+P E ++FVD+ V+ S+ L+ VP ++KQ S+Q ++A + R+ V+D A+++ N+
Sbjct: 62 --IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRI-VLDVASSVFNTG 118
Query: 134 -------MYSKYEQVAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKYNQLVRCTEE 186
+Y+ E AEQYA+ WR LN+LP+ PQVA +V+PTA +SEKYN +VR T E
Sbjct: 119 VQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTE 178
Query: 187 RGYPIATYLPLIPTERIAKVFDE 209
+GY +++YLPL+PTE+I KVF +
Sbjct: 179 QGYRVSSYLPLLPTEKITKVFGD 201
>sp|Q41112|SRP_PHAVU Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1
Length = 167
Score = 193 bits (490), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 126/170 (74%), Gaps = 8/170 (4%)
Query: 39 STVYEYAKESSGPLKPGVQAVEATVKTVLGPIYEDLHDVPFELLEFVDRKVEESLGELER 98
+ +Y YAKE +GPLKPGV VE VKTV+ P+Y+ H VP ELL++ DRKV GEL+R
Sbjct: 4 AILYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKV----GELDR 59
Query: 99 HVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNSMYSKYEQVAEQYALSAWRWLNRLPV 158
HVPS VK+ SSQAR++ EV+R GV +T ++YSKYE AEQ A+SAWR LN+LP+
Sbjct: 60 HVPSNVKKVSSQARSVVSEVRRDGV----STFAKTVYSKYEPTAEQCAVSAWRKLNQLPL 115
Query: 159 FPQVAQIVIPTAACWSEKYNQLVRCTEERGYPIATYLPLIPTERIAKVFD 208
FPQVA V+P AA +EKYN+++ + E+GY ++ YLPL+PTE+IAKVF
Sbjct: 116 FPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVFS 165
>sp|A2Y0H2|Y5513_ORYSI REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica
GN=OsI_017815 PE=2 SV=1
Length = 253
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 134/199 (67%), Gaps = 11/199 (5%)
Query: 20 RLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPIYEDLHDVPF 79
RL+YL+FVQ AA ++V + Y YAK+ +GPL+PGV VE TVK V+GP+Y+ H VP
Sbjct: 34 RLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPL 93
Query: 80 ELLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNS------ 133
+LL+F+DRKV ES+ EL+R VP +VK+A AR+ A EV++ G+V AT + S
Sbjct: 94 DLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE 153
Query: 134 -----MYSKYEQVAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKYNQLVRCTEERG 188
+Y++YE VAE+ A AW LNRLP+ P V + V+P AA S +YN V +RG
Sbjct: 154 PRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRG 213
Query: 189 YPIATYLPLIPTERIAKVF 207
+ATYLPL+PTER+++VF
Sbjct: 214 SAVATYLPLVPTERLSRVF 232
>sp|Q9FRA7|Y5513_ORYSJ REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa
subsp. japonica GN=Os05g0151300 PE=2 SV=2
Length = 253
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 134/199 (67%), Gaps = 11/199 (5%)
Query: 20 RLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPIYEDLHDVPF 79
RL+YL+FVQ AA ++V + Y YAK+ +GPL+PGV VE TVK V+GP+Y+ H VP
Sbjct: 34 RLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPL 93
Query: 80 ELLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNS------ 133
+LL+F+DRKV ES+ EL+R VP +VK+A AR+ A EV++ G+V AT + S
Sbjct: 94 DLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE 153
Query: 134 -----MYSKYEQVAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKYNQLVRCTEERG 188
+Y++YE VAE+ A AW LNRLP+ P V + V+P AA S +YN V +RG
Sbjct: 154 PRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRG 213
Query: 189 YPIATYLPLIPTERIAKVF 207
+ATYLPL+PTER+++VF
Sbjct: 214 SAVATYLPLVPTERLSRVF 232
>sp|Q9FYF7|Y1736_ARATH REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana
GN=At1g67360 PE=2 SV=1
Length = 240
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 13 RTEADEKRLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPIYE 72
+ + E LK+L FV++A I+I+ S +YEYAK++SGPLK V+ VE V TV+ P+Y+
Sbjct: 5 KKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQ 64
Query: 73 DLHDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQ----------RVG 122
DVP LL F+D KV E + + H P + K+ +QA + ++ R G
Sbjct: 65 KFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTG 124
Query: 123 VVDAATTIMNSMYSKYEQVAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKYNQLVR 182
AA N ++Y+ ++ W LN+ + +P AA +S +YN LV
Sbjct: 125 GPKAA---FNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVT 181
Query: 183 CTEERGYPIATYLPLIPTERIAKVFDE 209
GY + YLPL+P + I K +++
Sbjct: 182 DMTNMGYSLVGYLPLVPVDDIVKAYEK 208
>sp|P15252|REF_HEVBR Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2
Length = 138
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 59/100 (59%)
Query: 11 ETRTEADEKRLKYLDFVQVAAIYIIVCFSTVYEYAKESSGPLKPGVQAVEATVKTVLGPI 70
E + + LKYL FVQ AA Y + FS VY +AK+ SGPL+PGV +E VK V P+
Sbjct: 5 EDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPL 64
Query: 71 YEDLHDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQ 110
Y +P L+FVD V S+ ++R +P +VK AS Q
Sbjct: 65 YNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQ 104
>sp|A6GYW8|DNAA_FLAPJ Chromosomal replication initiator protein DnaA OS=Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511) GN=dnaA
PE=3 SV=1
Length = 478
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%)
Query: 60 EATVKTVLGPIYEDLHDVPFELLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQ 119
E + + +Y D ++P E++E+V R ++ ++ ELE + SL+ Q+S + + E+
Sbjct: 311 ETRISILKNILYRDGVEMPEEIIEYVARNIKSNVRELEGAIISLIAQSSFNKKEVTLELA 370
Query: 120 R 120
+
Sbjct: 371 K 371
>sp|Q6ZT21|TMPPE_HUMAN Transmembrane protein with metallophosphoesterase domain OS=Homo
sapiens GN=TMPPE PE=2 SV=2
Length = 453
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 126 AATTIMNSMYSKYEQVAEQYALSAWRWLNRL 156
AA T+ SM + +AE L AWRWL RL
Sbjct: 16 AAVTVFVSMIASRSYLAESLELRAWRWLLRL 46
>sp|A0KP08|PANC_AERHH Pantothenate synthetase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=panC PE=3 SV=1
Length = 285
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 97 ERHVPSLVKQASSQARAMAFEVQRVGVVDAAT 128
+ H+PSLV QAS + F + +VDAAT
Sbjct: 219 DHHLPSLVAQASQRLDKAGFRTDAIDIVDAAT 250
>sp|B9MEC5|Y2730_ACIET UPF0502 protein Dtpsy_2730 OS=Acidovorax ebreus (strain TPSY)
GN=Dtpsy_2730 PE=3 SV=1
Length = 225
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 81 LLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNSMYSKYEQ 140
+++ + +V+++L EL + L + AR + VGV D + ++ + + Q
Sbjct: 52 VMQLTESEVQQALDELRQQTLVLEIGGARVARWEHNFTRGVGVPDQSAALLGLLMLRGPQ 111
Query: 141 VAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKY-NQLVRCTEERGYPIATYLPLIP 199
A + ++A RW F ++ + E + ++L ++++G P+ T LP P
Sbjct: 112 TAGELRINAERWHR----FADISSV---------EAFLDELQSRSDDKGGPLVTLLPRAP 158
Query: 200 TER 202
R
Sbjct: 159 GAR 161
>sp|A1WB87|Y3392_ACISJ UPF0502 protein Ajs_3392 OS=Acidovorax sp. (strain JS42)
GN=Ajs_3392 PE=3 SV=1
Length = 225
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 81 LLEFVDRKVEESLGELERHVPSLVKQASSQARAMAFEVQRVGVVDAATTIMNSMYSKYEQ 140
+++ + +V+++L EL + L + AR + VGV D + ++ + + Q
Sbjct: 52 VMQLTESEVQQALDELRQQTLVLEIGGARVARWEHNFTRGVGVPDQSAALLGLLMLRGPQ 111
Query: 141 VAEQYALSAWRWLNRLPVFPQVAQIVIPTAACWSEKY-NQLVRCTEERGYPIATYLPLIP 199
A + ++A RW F ++ + E + ++L ++++G P+ T LP P
Sbjct: 112 TAGELRINAERWHR----FADISSV---------EAFLDELQSRSDDKGGPLVTLLPRAP 158
Query: 200 TER 202
R
Sbjct: 159 GAR 161
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,818,258
Number of Sequences: 539616
Number of extensions: 2917523
Number of successful extensions: 9978
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 9954
Number of HSP's gapped (non-prelim): 22
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)