Query 027165
Match_columns 227
No_of_seqs 58 out of 60
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 09:23:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027165.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027165hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ik7a_ a.77.1.2 (A:) Pelle de 37.1 7.7 0.00056 25.6 1.8 13 172-184 12-24 (52)
2 d1k28d2 b.106.1.1 (D:201-376) 31.5 3.5 0.00026 32.9 -0.8 30 70-99 112-149 (176)
3 d1gxha_ a.28.2.1 (A:) ImmE8 (I 19.1 25 0.0019 24.8 2.0 20 141-160 64-83 (85)
4 d1ayia_ a.28.2.1 (A:) ImmE7 pr 18.5 38 0.0028 23.9 2.8 21 140-160 65-85 (86)
5 d1rlia_ c.23.5.6 (A:) Hypothet 18.3 18 0.0013 25.5 1.0 37 49-87 51-92 (179)
6 d2vlqa1 a.28.2.1 (A:4-84) ImmE 17.6 42 0.003 23.4 2.8 20 140-159 61-80 (81)
7 d1rmda1 g.37.1.1 (A:87-116) V( 14.6 28 0.002 20.4 1.0 13 174-186 16-28 (30)
8 d1thta_ c.69.1.13 (A:) Myristo 13.9 38 0.0027 26.1 2.0 22 173-194 44-65 (302)
9 d2ccaa1 a.93.1.3 (A:26-435) Ca 13.2 48 0.0035 29.0 2.7 16 185-201 393-409 (410)
10 d1tqha_ c.69.1.29 (A:) Carboxy 13.1 52 0.0038 21.6 2.3 20 174-193 24-43 (242)
No 1
>d1ik7a_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=37.07 E-value=7.7 Score=25.57 Aligned_cols=13 Identities=31% Similarity=0.739 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhh
Q 027165 172 CWSEKYNQLVRCT 184 (227)
Q Consensus 172 ~~seKYN~~V~~~ 184 (227)
-|.++|||+|..+
T Consensus 12 ~Wg~q~NHTi~eL 24 (52)
T d1ik7a_ 12 IWGGQYNHTVQTL 24 (52)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HhCCcccccHHHH
Confidence 5999999999876
No 2
>d1k28d2 b.106.1.1 (D:201-376) Baseplate structural protein gp27 {Bacteriophage T4 [TaxId: 10665]}
Probab=31.47 E-value=3.5 Score=32.89 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=26.1
Q ss_pred cccccccChhhhHHhhccc--------cccchhccccc
Q 027165 70 IYEDLHDVPFELLEFVDRK--------VEESLGELERH 99 (227)
Q Consensus 70 VY~Kf~~vP~elL~FvDrK--------VDesv~~ld~~ 99 (227)
.|.-|.-.|-..|.|.|.| |||.++++.+.
T Consensus 112 t~GnF~LtPg~ki~F~D~KnQf~~ef~VDEVIHEiS~~ 149 (176)
T d1k28d2 112 TIGNFNLTPGVKIIFNDSKNQFKTEFYVDEVIHELSNN 149 (176)
T ss_dssp ESCCTTCCTTCEECEECSSCCCCSCEEEEEEEEEEESS
T ss_pred EeccccccCCcEEEEechhhhhccchhHHHHHHHHhcc
Confidence 4678999999999999998 99999997653
No 3
>d1gxha_ a.28.2.1 (A:) ImmE8 (Im8) {Escherichia coli [TaxId: 562]}
Probab=19.11 E-value=25 Score=24.79 Aligned_cols=20 Identities=25% Similarity=0.265 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHhcCCCChh
Q 027165 141 VAEQYALSAWRWLNRLPVFP 160 (227)
Q Consensus 141 ~ae~~av~aW~kLn~lPlfp 160 (227)
----..++.||+-|.+|.|=
T Consensus 64 egIv~~IKeWRa~nG~PgFK 83 (85)
T d1gxha_ 64 EAVIKEIKEWRAANGKSGFK 83 (85)
T ss_dssp HHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHHHHHHHHcCCcccc
Confidence 33345789999999999984
No 4
>d1ayia_ a.28.2.1 (A:) ImmE7 protein (Im7) {Escherichia coli [TaxId: 562]}
Probab=18.52 E-value=38 Score=23.90 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHhcCCCChh
Q 027165 140 QVAEQYALSAWRWLNRLPVFP 160 (227)
Q Consensus 140 p~ae~~av~aW~kLn~lPlfp 160 (227)
|----..|+.||.-|.+|.|=
T Consensus 65 PegI~k~IKeWRa~nG~PgFK 85 (86)
T d1ayia_ 65 PEGIVKEIKEWRAANGKPGFK 85 (86)
T ss_dssp HHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCccC
Confidence 444556789999999999983
No 5
>d1rlia_ c.23.5.6 (A:) Hypothetical protein YwqN {Bacillus subtilis [TaxId: 1423]}
Probab=18.32 E-value=18 Score=25.53 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=24.7
Q ss_pred CCCCCccchhhhhhccc-----cccccccccccChhhhHHhhcc
Q 027165 49 SGPLKPGVQAVEATVKT-----VLGPIYEDLHDVPFELLEFVDR 87 (227)
Q Consensus 49 SGPLkpgV~tVE~tVkt-----VVgPVY~Kf~~vP~elL~FvDr 87 (227)
..+.+..++.+-..++. +++|+| +.++|-.+-.|+||
T Consensus 51 ~~~~~d~~~~~~~~l~~AD~ii~~sP~y--~~~~~a~lK~~iDr 92 (179)
T d1rlia_ 51 FRPVQDDYDSIIERILQCHILIFATPIY--WFGMSGTLKLFIDR 92 (179)
T ss_dssp ------CHHHHHHHHHTCSEEEEEEECB--TTBCCHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHHhCCeEEEeeccc--CCCccHHHHHHHHH
Confidence 34556666665555543 789999 78999999999998
No 6
>d2vlqa1 a.28.2.1 (A:4-84) ImmE9 protein (Im9) {Escherichia coli [TaxId: 562]}
Probab=17.60 E-value=42 Score=23.42 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhcCCCCh
Q 027165 140 QVAEQYALSAWRWLNRLPVF 159 (227)
Q Consensus 140 p~ae~~av~aW~kLn~lPlf 159 (227)
|----..++.||+-|.+|.|
T Consensus 61 PegIv~~IK~WRa~nG~PgF 80 (81)
T d2vlqa1 61 PSGIVNTVKQWRAANGKSGF 80 (81)
T ss_dssp HHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCC
Confidence 44444678999999999998
No 7
>d1rmda1 g.37.1.1 (A:87-116) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.55 E-value=28 Score=20.44 Aligned_cols=13 Identities=46% Similarity=0.600 Sum_probs=9.6
Q ss_pred HHHHHHHHHhhhh
Q 027165 174 SEKYNQLVRCTEE 186 (227)
Q Consensus 174 seKYN~~V~~~a~ 186 (227)
-||||+-|.+-.|
T Consensus 16 leKYnhHvSsHKe 28 (30)
T d1rmda1 16 LEKYNHHVSSHKE 28 (30)
T ss_dssp HHHHHHHHHTSCC
T ss_pred hhhhcchhhcccc
Confidence 4899999876443
No 8
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}
Probab=13.87 E-value=38 Score=26.14 Aligned_cols=22 Identities=14% Similarity=0.398 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhhhhcCcceeee
Q 027165 173 WSEKYNQLVRCTEERGYPIATY 194 (227)
Q Consensus 173 ~seKYN~~V~~~a~kgy~va~Y 194 (227)
-++.|......++++||+|..|
T Consensus 44 ~~~~~~~~a~~L~~~G~~Vi~~ 65 (302)
T d1thta_ 44 RMDHFAGLAEYLSTNGFHVFRY 65 (302)
T ss_dssp GGGGGHHHHHHHHTTTCCEEEE
T ss_pred hHHHHHHHHHHHHHCCCEEEEe
Confidence 3578999999999999999876
No 9
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.21 E-value=48 Score=29.01 Aligned_cols=16 Identities=50% Similarity=1.182 Sum_probs=11.3
Q ss_pred hhcCcceeeec-cCcchh
Q 027165 185 EERGYPIATYL-PLIPTE 201 (227)
Q Consensus 185 a~kgy~va~YL-PlVP~E 201 (227)
.+.| +.+.|| |.||-|
T Consensus 393 rDmg-p~~r~~g~~~p~e 409 (410)
T d2ccaa1 393 RDMG-PVARYLGPLVPKQ 409 (410)
T ss_dssp TTSC-SGGGCBSTTCCSC
T ss_pred ccCC-chhhccCCCCCCC
Confidence 4555 777888 888865
No 10
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}
Probab=13.05 E-value=52 Score=21.62 Aligned_cols=20 Identities=30% Similarity=0.400 Sum_probs=16.7
Q ss_pred HHHHHHHHHhhhhcCcceee
Q 027165 174 SEKYNQLVRCTEERGYPIAT 193 (227)
Q Consensus 174 seKYN~~V~~~a~kgy~va~ 193 (227)
++-|+.....++++||+|..
T Consensus 24 ~~~~~~l~~~L~~~G~~v~~ 43 (242)
T d1tqha_ 24 SADVRMLGRFLESKGYTCHA 43 (242)
T ss_dssp THHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 45578899999999999975
Done!