Your job contains 1 sequence.
>027168
MNTEVIPTKLDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFII
VADSDFKFIVHDVRSKDGIVFHYGVVENSGGEFEMELEKGKEVRLWVDESRRKLNSRPYV
EYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPHYIPQGSTP
RIVKLGDNPGCPCGGTHVSDISEIISMKVSQIRTKKGTTKVFYSVGS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027168
(227 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504955757 - symbol:AT3G16565 species:3702 "Ara... 452 1.5e-81 2
UNIPROTKB|Q57984 - symbol:alaS "Alanine--tRNA ligase" spe... 128 1.1e-08 2
UNIPROTKB|Q46AR9 - symbol:alaXM "Alanyl-tRNA editing prot... 114 1.5e-08 2
TIGR_CMR|BA_1720 - symbol:BA_1720 "alanyl-tRNA synthetase... 102 1.6e-08 2
UNIPROTKB|O58035 - symbol:alaS "Alanine--tRNA ligase" spe... 105 2.0e-07 2
UNIPROTKB|O28029 - symbol:alaS "Alanine--tRNA ligase" spe... 106 5.0e-07 2
ASPGD|ASPL0000072203 - symbol:AN11110 species:162425 "Eme... 92 7.6e-07 2
UNIPROTKB|Q97ZX2 - symbol:alaXM "Alanyl-tRNA editing prot... 85 2.8e-06 2
UNIPROTKB|O57848 - symbol:alaXM "Alanyl-tRNA editing prot... 87 3.8e-05 2
UNIPROTKB|Q8Q0A4 - symbol:alaXM "Alanyl-tRNA editing prot... 88 4.0e-05 2
TIGR_CMR|BA_3684 - symbol:BA_3684 "alanyl-tRNA synthetase... 106 4.8e-05 2
CGD|CAL0003544 - symbol:orf19.5239 species:5476 "Candida ... 84 9.6e-05 2
SGD|S000005862 - symbol:ALA1 "Cytoplasmic and mitochondri... 111 0.00073 2
>TAIR|locus:504955757 [details] [associations]
symbol:AT3G16565 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004813 "alanine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006419 "alanyl-tRNA
aminoacylation" evidence=IEA] [GO:0016876 "ligase activity, forming
aminoacyl-tRNA and related compounds" evidence=IEA] [GO:0043039
"tRNA aminoacylation" evidence=IEA] InterPro:IPR012947
InterPro:IPR018163 InterPro:IPR018164 InterPro:IPR018165
Pfam:PF01411 Pfam:PF07973 PROSITE:PS50860 SMART:SM00863
GO:GO:0005524 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG2872 GO:GO:0004813 GO:GO:0003676 GO:GO:0006419
SUPFAM:SSF55186 HOGENOM:HOG000230779 EMBL:AB022217 IPI:IPI00847023
RefSeq:NP_001078163.1 UniGene:At.50991 ProteinModelPortal:A8MSD3
SMR:A8MSD3 PaxDb:A8MSD3 PRIDE:A8MSD3 DNASU:820906
EnsemblPlants:AT3G16565.2 GeneID:820906 KEGG:ath:AT3G16565
TAIR:At3g16565 OMA:AHHWPGE PhylomeDB:A8MSD3 ProtClustDB:PLN02961
Genevestigator:A8MSD3 Uniprot:A8MSD3
Length = 256
Score = 452 (164.2 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 82/110 (74%), Positives = 97/110 (88%)
Query: 118 PYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPHYIPQG 177
P+VEYKGSVPQ E Q K KELE EAN LIS+GGKV A+LPYEEAS+LCGG LP YI +G
Sbjct: 147 PFVEYKGSVPQEEFQVKQKELEAEANELISKGGKVYAAILPYEEASVLCGGSLPDYISKG 206
Query: 178 STPRIVKLGDNPGCPCGGTHVSDISEIISMKVSQIRTKKGTTKVFYSVGS 227
STPRI+KLGD+PGCPCGGTHVS++S+IISMK++Q+RTKKG TKVFY++ S
Sbjct: 207 STPRIIKLGDSPGCPCGGTHVSNLSDIISMKITQMRTKKGMTKVFYTIAS 256
Score = 385 (140.6 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 77/111 (69%), Positives = 86/111 (77%)
Query: 7 PTKLDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDF 66
PTKLDY+ +M LQS S+ +S FK DGR ALILEST+FHPQGGGQPSDTG I+ + SD
Sbjct: 5 PTKLDYHVDMFNLQSHSRFLSLFKAQDGRIALILESTVFHPQGGGQPSDTGLIVFSGSDL 64
Query: 67 KFIVHDVRSKDGIVFHYGVVENSGGEFEMELEKGKEVRLWVDESRRKLNSR 117
KF V DVRSKDGIV HYGV E S E ++ EKGKEV L VDESRRKLNSR
Sbjct: 65 KFSVQDVRSKDGIVLHYGVFEGSNPESGIDSEKGKEVYLTVDESRRKLNSR 115
>UNIPROTKB|Q57984 [details] [associations]
symbol:alaS "Alanine--tRNA ligase" species:243232
"Methanocaldococcus jannaschii DSM 2661" [GO:0002161
"aminoacyl-tRNA editing activity" evidence=IDA] [GO:0006450
"regulation of translational fidelity" evidence=IDA]
InterPro:IPR002318 InterPro:IPR012947 InterPro:IPR018162
InterPro:IPR018163 InterPro:IPR018164 InterPro:IPR018165
InterPro:IPR022429 Pfam:PF01411 Pfam:PF07973 PRINTS:PR00980
PROSITE:PS50860 SMART:SM00863 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 GO:GO:0004813 GO:GO:0006419 SUPFAM:SSF55186
GO:GO:0000049 GO:GO:0002161 PANTHER:PTHR11777:SF6 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG0013 KO:K01872 SUPFAM:SSF101353
TIGRFAMs:TIGR00344 OMA:ISQPSIR ProtClustDB:PRK13902
HAMAP:MF_00036_A TIGRFAMs:TIGR03683 PIR:D64370 RefSeq:NP_247543.1
ProteinModelPortal:Q57984 DNASU:1451429 GeneID:1451429
KEGG:mja:MJ_0564 Uniprot:Q57984
Length = 892
Score = 128 (50.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/105 (34%), Positives = 60/105 (57%)
Query: 8 TKLDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFK 67
T+L +Y+ + +K++ DD +IL+ T F+P+GGGQ +DTG+II D F+
Sbjct: 492 TELLFYEYPKMKEFEAKILRIV--DD---YVILDRTAFYPEGGGQKADTGYIIKGDKKFR 546
Query: 68 FIVHDVRSKDGIVFHYGVVENSGGEFEMELEKGKEVRLWVDESRR 112
+ DV+ ++ IV+H +EN E L++G V+ +D RR
Sbjct: 547 VV--DVQKENNIVYHK--IENLNDE----LKEGDIVKGVIDWKRR 583
Score = 72 (30.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/103 (25%), Positives = 46/103 (44%)
Query: 132 QSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPH--YIPQGSTPRIVKLGDNP 189
+ + K++E AN ++ + + EA G + +P G+ RIV + D
Sbjct: 632 REELKDIERVANEIVLNNYNIKSIFMDRNEAEEKFGFRIYQGGVVP-GNVLRIVIIEDEN 690
Query: 190 GC-----PCGGTHVSDISEIISMKVSQI-RTKKGTTKVFYSVG 226
G CGGTH + E+ +K+ + R + G ++ YS G
Sbjct: 691 GNIVDVQACGGTHCQNTGEVGFIKIIKTERVQDGVERLIYSSG 733
>UNIPROTKB|Q46AR9 [details] [associations]
symbol:alaXM "Alanyl-tRNA editing protein AlaX-M"
species:269797 "Methanosarcina barkeri str. Fusaro" [GO:0002161
"aminoacyl-tRNA editing activity" evidence=IDA] [GO:0006450
"regulation of translational fidelity" evidence=IDA]
InterPro:IPR012947 InterPro:IPR018163 InterPro:IPR018164
InterPro:IPR018165 Pfam:PF01411 Pfam:PF07973 PROSITE:PS50860
SMART:SM00863 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
eggNOG:COG2872 KO:K07050 GO:GO:0004813 GO:GO:0003676 GO:GO:0006419
SUPFAM:SSF55186 EMBL:CP000099 RefSeq:YP_305603.1
ProteinModelPortal:Q46AR9 STRING:Q46AR9 GeneID:3625707
GenomeReviews:CP000099_GR KEGG:mba:Mbar_A2092 HOGENOM:HOG000230779
OMA:HMRLHTA ProtClustDB:CLSK2391194
BioCyc:MBAR269797:GHUW-2163-MONOMER GO:GO:0002161 Uniprot:Q46AR9
Length = 243
Score = 114 (45.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 10 LDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFI 69
LD Y M + ++T + ++ DD + ++L+ T+F+P+ GGQPSDTG ++ +F
Sbjct: 8 LDCY--MKEFEATVEKVT----DD--KFVVLDRTVFYPESGGQPSDTGKLVRESDGAEFN 59
Query: 70 VHDVRSKDGIVFHYGVVENSGGEFEMELEKGKEVRLWVDESRRKLNSR 117
V VR +G + H E G L+ G +V+ ++D RR + R
Sbjct: 60 VLYVRKFNGDISH----EIDGENVSNGLKAGDKVKGFIDWDRRYRHMR 103
Score = 70 (29.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 132 QSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPHYIPQGSTPRI--VKLGDNP 189
+ K E E AN LI++ V + ++ +EA + +G + I V++ +
Sbjct: 144 RDKFAEYEKIANDLIAQKSPVNLYLVSRKEAEEKLSRLTT--LAKGFSDEIKEVRIVEIE 201
Query: 190 GCP---CGGTHVSDISEIISMKVSQIRTK-KGTTKVFYSV 225
G CGGTHV + EI +K+ +++ K K ++++++
Sbjct: 202 GVTIEACGGTHVKNTEEIKGVKIIKLQNKGKSNRRMYFTL 241
>TIGR_CMR|BA_1720 [details] [associations]
symbol:BA_1720 "alanyl-tRNA synthetase domain protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0004813
"alanine-tRNA ligase activity" evidence=ISS] [GO:0006419
"alanyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR012947
InterPro:IPR018163 InterPro:IPR018164 InterPro:IPR018165
Pfam:PF01411 Pfam:PF07973 PROSITE:PS50860 SMART:SM00863
GO:GO:0005524 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K07050 GO:GO:0004813 GO:GO:0003676
GO:GO:0006419 SUPFAM:SSF55186 HOGENOM:HOG000230779 OMA:IEVKVYW
RefSeq:NP_844155.1 RefSeq:YP_018360.1 RefSeq:YP_027864.1
ProteinModelPortal:Q81SE0 DNASU:1083755
EnsemblBacteria:EBBACT00000011763 EnsemblBacteria:EBBACT00000016814
EnsemblBacteria:EBBACT00000021674 GeneID:1083755 GeneID:2817887
GeneID:2852808 KEGG:ban:BA_1720 KEGG:bar:GBAA_1720 KEGG:bat:BAS1597
ProtClustDB:CLSK873466 BioCyc:BANT260799:GJAJ-1669-MONOMER
BioCyc:BANT261594:GJ7F-1737-MONOMER Uniprot:Q81SE0
Length = 236
Score = 102 (41.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 33 DGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVHDVRSKDGIVFHY 83
+G + + E T+F+P GGGQ DTG +IV D F F V V+ + G + HY
Sbjct: 23 EGNKVFVKE-TVFYPTGGGQECDTG-VIVQDG-FVFEVEKVKKEQGEIVHY 70
Score = 84 (34.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 123 KGSVPQNELQSKTK-ELE---LEANALISRGGKVMVAVLPYEEASMLCG------GCLPH 172
K + NELQ + E+E E N LI + ++ + EEA G LP
Sbjct: 125 KARIDFNELQELSSVEVEGIVKEVNKLIEQNKEISTRYMSREEAENAVGMIKTAINLLPT 184
Query: 173 YIPQGSTPRIVKLGDNPGCPCGGTHVSDISEIISMKVSQIRTK 215
I + RIV + + CGGTHV + SEI ++ + ++++K
Sbjct: 185 TIQE---IRIVTIENLDEQACGGTHVKNTSEIGTLVIDKVKSK 224
>UNIPROTKB|O58035 [details] [associations]
symbol:alaS "Alanine--tRNA ligase" species:70601
"Pyrococcus horikoshii OT3" [GO:0002161 "aminoacyl-tRNA editing
activity" evidence=IDA] [GO:0006450 "regulation of translational
fidelity" evidence=IDA] InterPro:IPR002318 InterPro:IPR003156
InterPro:IPR012947 InterPro:IPR018162 InterPro:IPR018163
InterPro:IPR018164 InterPro:IPR018165 InterPro:IPR022429
Pfam:PF01411 Pfam:PF02272 Pfam:PF07973 PRINTS:PR00980
PROSITE:PS50860 SMART:SM00863 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 GO:GO:0004813 GO:GO:0006419 SUPFAM:SSF55186
EMBL:BA000001 GenomeReviews:BA000001_GR GO:GO:0000049 GO:GO:0002161
PANTHER:PTHR11777:SF6 eggNOG:COG0013 KO:K01872 SUPFAM:SSF101353
TIGRFAMs:TIGR00344 OMA:ISQPSIR ProtClustDB:PRK13902
HAMAP:MF_00036_A TIGRFAMs:TIGR03683 PIR:C71455 RefSeq:NP_142285.1
PDB:2ZZE PDB:2ZZF PDB:2ZZG PDBsum:2ZZE PDBsum:2ZZF PDBsum:2ZZG
ProteinModelPortal:O58035 EnsemblBacteria:EBPYRT00000001158
GeneID:1444180 KEGG:pho:PH0297 HOGENOM:HOG000015496
BioCyc:PHOR70601:GJWR-281-MONOMER EvolutionaryTrace:O58035
Uniprot:O58035
Length = 915
Score = 105 (42.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/94 (32%), Positives = 51/94 (54%)
Query: 8 TKLDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFK 67
T+ YY++ + +K++ K D +IL++T F+P+GGGQP DTG +IV + K
Sbjct: 516 TRRLYYEDPFMKEFDAKVLRVIK--DW---VILDATAFYPEGGGQPYDTGVLIVNGREVK 570
Query: 68 FIVHDVRSKDGIVFHYGVVENSGGEFEMELEKGK 101
V +V+ ++ H VE+ G E + GK
Sbjct: 571 --VTNVQKVGKVIIHK--VEDPGAFKEGMIVHGK 600
Score = 87 (35.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 132 QSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPH--YIPQGSTPRIVKLGDNP 189
+ + KE+E+ AN ++ KV LP A G L +P G R+VK+ D
Sbjct: 655 EEELKEIEMLANRIVMEDRKVTWEWLPRTTAEQKYGFRLYQGGVVP-GREIRVVKIEDWD 713
Query: 190 GCPCGGTHVSDISEIISMKVSQI-RTKKGTTKVFYSVG 226
CGGTH+ + +K+ + R + G ++ ++ G
Sbjct: 714 VQACGGTHLPSTGLVGPIKILRTERIQDGVERIIFACG 751
>UNIPROTKB|O28029 [details] [associations]
symbol:alaS "Alanine--tRNA ligase" species:224325
"Archaeoglobus fulgidus DSM 4304" [GO:0002161 "aminoacyl-tRNA
editing activity" evidence=IMP] [GO:0006419 "alanyl-tRNA
aminoacylation" evidence=IMP] [GO:0006450 "regulation of
translational fidelity" evidence=IMP] InterPro:IPR002318
InterPro:IPR003156 InterPro:IPR012947 InterPro:IPR018162
InterPro:IPR018163 InterPro:IPR018164 InterPro:IPR018165
InterPro:IPR022429 Pfam:PF01411 Pfam:PF02272 Pfam:PF07973
PRINTS:PR00980 PROSITE:PS50860 SMART:SM00863 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0004813 GO:GO:0006419
SUPFAM:SSF55186 GO:GO:0000049 EMBL:AE000782
GenomeReviews:AE000782_GR GO:GO:0002161 PANTHER:PTHR11777:SF6
eggNOG:COG0013 KO:K01872 SUPFAM:SSF101353 TIGRFAMs:TIGR00344
OMA:SFEFLTS PIR:G69531 RefSeq:NP_071080.1 PDB:2ZTG PDB:2ZVF
PDBsum:2ZTG PDBsum:2ZVF ProteinModelPortal:O28029 DIP:DIP-48856N
GeneID:1485486 KEGG:afu:AF2255 ProtClustDB:PRK13902
BioCyc:AFUL224325:GJBC-2303-MONOMER EvolutionaryTrace:O28029
HAMAP:MF_00036_A TIGRFAMs:TIGR03683 Uniprot:O28029
Length = 906
Score = 106 (42.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 1 MNTEVIPTKLDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFII 60
+ E T+ YYD+ L+ +++I +GD +IL + F+P+ GGQ +D G++I
Sbjct: 497 LQNEYPATEKLYYDDPTLLEFEAEVIGV-EGD----FVILNRSAFYPESGGQDNDVGYLI 551
Query: 61 VADSDFKFIVHDVRSKDGIVFH 82
KF V DV DG+V H
Sbjct: 552 ANGG--KFEVVDVLEADGVVLH 571
Score = 82 (33.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 132 QSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPHY-IPQGSTPRIVKLGDNPG 190
+ + KE+E+ AN I + + EA G L +P G R+V++GD+
Sbjct: 642 EEEIKEIEMLANREILANKPIKWEWMDRIEAERKFGFRLYQGGVPPGRKIRVVQVGDDVQ 701
Query: 191 CPCGGTHVSDISEIISMKVSQIRT-KKGTTKVFYSVG 226
CGGTH EI +K+ ++ + + G + ++ G
Sbjct: 702 A-CGGTHCRSTGEIGMLKILKVESIQDGVIRFEFAAG 737
>ASPGD|ASPL0000072203 [details] [associations]
symbol:AN11110 species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043039 "tRNA
aminoacylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016876
"ligase activity, forming aminoacyl-tRNA and related compounds"
evidence=IEA] InterPro:IPR012947 InterPro:IPR018163 Pfam:PF07973
SMART:SM00863 GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF55186
GO:GO:0043039 EMBL:BN001303 HOGENOM:HOG000230779 GO:GO:0004812
ProteinModelPortal:C8VA46 EnsemblFungi:CADANIAT00006370 OMA:AGHILDY
Uniprot:C8VA46
Length = 283
Score = 92 (37.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 37 ALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVH 71
A+ + T+F+PQGGGQPSDTG I ++ D K I+H
Sbjct: 71 AVTTQQTVFYPQGGGQPSDTGIIAIS-FDGK-ILH 103
Score = 83 (34.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 181 RIVKLGDNPGCPCGGTHVSDISEIISMKVSQIRTKKGTTKVFYSV 225
R+ ++GD PCGGTHV + + +I +KG ++V Y V
Sbjct: 234 RVAEIGDLDANPCGGTHVVSTKRTGRIVIRKISRQKGISRVSYEV 278
>UNIPROTKB|Q97ZX2 [details] [associations]
symbol:alaXM "Alanyl-tRNA editing protein AlaX-M"
species:273057 "Sulfolobus solfataricus P2" [GO:0002161
"aminoacyl-tRNA editing activity" evidence=IDA] [GO:0006450
"regulation of translational fidelity" evidence=IDA]
InterPro:IPR012947 InterPro:IPR018163 InterPro:IPR018164
InterPro:IPR018165 Pfam:PF01411 Pfam:PF07973 PROSITE:PS50860
SMART:SM00863 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
eggNOG:COG2872 KO:K07050 GO:GO:0004813 GO:GO:0003676 GO:GO:0006419
SUPFAM:SSF55186 EMBL:AE006641 GenomeReviews:AE006641_GR
HOGENOM:HOG000230779 OMA:HMRLHTA GO:GO:0002161 PIR:A90190
RefSeq:NP_341986.1 ProteinModelPortal:Q97ZX2 GeneID:1455586
KEGG:sso:SSO0450 ProtClustDB:CLSK2301220 Uniprot:Q97ZX2
Length = 236
Score = 85 (35.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 131 LQSKTKELEL--EANALISRGGKVMVAVLPYEEASML-----CGGCLPHYIPQGSTPRIV 183
+++K +EL EAN +I + ++ + LP EEA M+ G P IP RIV
Sbjct: 135 VENKDTLIELINEANEIIKKDIELKIYFLPREEALMIPAIVKLAGRNPPQIPIW---RIV 191
Query: 184 KLGDNPGCPC---GGTHVSDISEIISMKVSQIRTK-KGTTKVFYSV 225
++ PG GG HV + EI + + ++ K KG +V+Y+V
Sbjct: 192 EI---PGIDIQADGGPHVKNTKEIGEIVLLKVENKGKGRKRVYYTV 234
Score = 83 (34.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 27 SYFKGDDGR------RALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVHDVRSKDGIV 80
SY K +GR +IL+ T F+P GGG +DTGF++ + + R ++G +
Sbjct: 10 SYIKEFEGRVVRIEGNYVILDKTAFYPGGGGLDNDTGFLVNEKGERISVTEVKRGENGEI 69
Query: 81 FH 82
H
Sbjct: 70 LH 71
>UNIPROTKB|O57848 [details] [associations]
symbol:alaXM "Alanyl-tRNA editing protein AlaX-M"
species:70601 "Pyrococcus horikoshii OT3" [GO:0002161
"aminoacyl-tRNA editing activity" evidence=IDA] [GO:0006450
"regulation of translational fidelity" evidence=IDA]
InterPro:IPR002318 InterPro:IPR012947 InterPro:IPR018163
InterPro:IPR018164 InterPro:IPR018165 Pfam:PF01411 Pfam:PF07973
PROSITE:PS50860 SMART:SM00863 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 eggNOG:COG2872 KO:K07050 GO:GO:0004813 GO:GO:0003676
GO:GO:0006419 SUPFAM:SSF55186 EMBL:BA000001
GenomeReviews:BA000001_GR HOGENOM:HOG000230779 GO:GO:0002161
PIR:B71231 RefSeq:NP_142120.1 PDB:2E1B PDBsum:2E1B
ProteinModelPortal:O57848 SMR:O57848
EnsemblBacteria:EBPYRT00000000546 GeneID:1444008 KEGG:pho:PH0108
OMA:LDVYKDE ProtClustDB:CLSK253141
BioCyc:PHOR70601:GJWR-109-MONOMER EvolutionaryTrace:O57848
PANTHER:PTHR11777:SF6 Uniprot:O57848
Length = 216
Score = 87 (35.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 38/108 (35%), Positives = 59/108 (54%)
Query: 9 KLDYYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKF 68
KL Y D LK ++ +++ D+ A++L+ TIF+P GGGQP D G I +
Sbjct: 7 KLYYEDAYLK-EAKGRVLEI--RDN---AILLDQTIFYPTGGGQPHDRGTINGVE----- 55
Query: 69 IVHDV-RSKDGIVFHYGVVENSGGEFEMELEKGKEVRLWVD-ESRRKL 114
V DV + ++G V+H VV+ +F++ G EV L +D + R KL
Sbjct: 56 -VLDVYKDEEGNVWH--VVKEPE-KFKV----GDEVELKIDWDYRYKL 95
Score = 68 (29.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 181 RIVKLGDNPGCPCGGTHVSDISEIISMK 208
R ++ D PCGGTHV DI EI +K
Sbjct: 170 RYTQIRDFEVIPCGGTHVKDIKEIGHIK 197
>UNIPROTKB|Q8Q0A4 [details] [associations]
symbol:alaXM "Alanyl-tRNA editing protein AlaX-M"
species:192952 "Methanosarcina mazei Go1" [GO:0002161
"aminoacyl-tRNA editing activity" evidence=IMP] [GO:0006450
"regulation of translational fidelity" evidence=IMP]
InterPro:IPR012947 InterPro:IPR018163 InterPro:IPR018164
InterPro:IPR018165 Pfam:PF01411 Pfam:PF07973 PROSITE:PS50860
SMART:SM00863 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
eggNOG:COG2872 KO:K07050 GO:GO:0004813 GO:GO:0003676 GO:GO:0006419
SUPFAM:SSF55186 HOGENOM:HOG000230779 ProtClustDB:CLSK2391194
GO:GO:0002161 EMBL:AE008384 RefSeq:NP_632257.1
ProteinModelPortal:Q8Q0A4 GeneID:1478575 GenomeReviews:AE008384_GR
KEGG:mma:MM_0233 Uniprot:Q8Q0A4
Length = 251
Score = 88 (36.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 38 LILESTIFHPQGGGQPSDTGFIIVADSDFKFIVHDVRSKDGIVFHYGVVENSGGEFEME- 96
++L+ T F+P+ GGQPSDTG ++ +F V +G + H E GE E
Sbjct: 28 IVLDRTAFYPESGGQPSDTGKLVRERDGAEFKVVYAGKFNGDISHEISPE---GETGAEG 84
Query: 97 LEKGKEVRLWVDESRRKLNSR 117
L+ G +V+ +D RR + R
Sbjct: 85 LKVGDKVKGIIDWDRRYRHMR 105
Score = 69 (29.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 24/100 (24%), Positives = 49/100 (49%)
Query: 132 QSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPHYIPQGSTPRI--VKLGDNP 189
+ K E E AN +I+ V + ++ +EA + +G + I V+L +
Sbjct: 146 REKFAEYEKIANEIIAENHSVNLYLVSRKEAEERLSRLTT--LAKGFSEEITEVRLVEIE 203
Query: 190 GCP---CGGTHVSDISEIISMKVSQIRTK-KGTTKVFYSV 225
G CGG+H+ + EI +K+ +++ K K ++++S+
Sbjct: 204 GVTIEACGGSHLKNTGEIKGIKIEKLQNKGKSNRRMYFSL 243
>TIGR_CMR|BA_3684 [details] [associations]
symbol:BA_3684 "alanyl-tRNA synthetase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0004813
"alanine-tRNA ligase activity" evidence=ISS] [GO:0006419
"alanyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR003156
InterPro:IPR012947 InterPro:IPR018163 InterPro:IPR018164
InterPro:IPR018165 Pfam:PF01411 Pfam:PF02272 Pfam:PF07973
PROSITE:PS50860 SMART:SM00863 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR KO:K07050
GO:GO:0004813 GO:GO:0003676 GO:GO:0006419 SUPFAM:SSF55186
RefSeq:NP_845947.1 RefSeq:YP_020317.1 RefSeq:YP_029671.1
ProteinModelPortal:Q81Y73 DNASU:1085226
EnsemblBacteria:EBBACT00000009889 EnsemblBacteria:EBBACT00000017000
EnsemblBacteria:EBBACT00000021553 GeneID:1085226 GeneID:2816352
GeneID:2849656 KEGG:ban:BA_3684 KEGG:bar:GBAA_3684 KEGG:bat:BAS3415
HOGENOM:HOG000095301 OMA:GPIRIIS ProtClustDB:CLSK918174
BioCyc:BANT260799:GJAJ-3477-MONOMER
BioCyc:BANT261594:GJ7F-3589-MONOMER Uniprot:Q81Y73
Length = 411
Score = 106 (42.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 12 YYDNMLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTG 57
YY + K T+K+I DG +IL T+F+P GGGQP DTG
Sbjct: 17 YYTDAYKQDFTTKVIKQDYDKDGNLYVILNETVFYPTGGGQPHDTG 62
Score = 54 (24.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 22/97 (22%), Positives = 41/97 (42%)
Query: 131 LQSKTKELELE-ANALISRGGKVMVAVLPYEEASMLCGGCLPHYIPQGSTPRIVKLGDNP 189
L ++T E ++ AN ++ +++ + EEA L L R+V + +
Sbjct: 145 LHAETVEKAVQIANKIVFENHPILIKWMNLEEAKTLP---LRKEPTMTENIRVVMIENFD 201
Query: 190 GCPCGGTHVSDISEIISMKVSQIRTKKGTTKVFYSVG 226
CGGTH E+ ++V KG ++ + G
Sbjct: 202 YNGCGGTHPKRTGEVGPIQVLGWERNKGGIRLTFIAG 238
>CGD|CAL0003544 [details] [associations]
symbol:orf19.5239 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR012947 InterPro:IPR018163
InterPro:IPR018164 InterPro:IPR018165 Pfam:PF01411 Pfam:PF07973
PROSITE:PS50860 SMART:SM00863 CGD:CAL0003544 GO:GO:0005524
GO:GO:0005737 eggNOG:COG2872 KO:K07050 GO:GO:0004813 GO:GO:0003676
GO:GO:0006419 SUPFAM:SSF55186 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716308.1 RefSeq:XP_716369.1 ProteinModelPortal:Q5A3N1
STRING:Q5A3N1 GeneID:3641981 GeneID:3642023 KEGG:cal:CaO19.12703
KEGG:cal:CaO19.5239 Uniprot:Q5A3N1
Length = 471
Score = 84 (34.6 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 40 LESTIFHPQGGGQPSDTGFIIVADSDFKFIVHDVRS--KDGI-VFHYGVVENSGGEFEME 96
LE TI P+GGGQP D G I + + K I +V+S +D + H +V+ E+
Sbjct: 68 LEDTILFPEGGGQPYDKGTITLLPDNTKII--EVKSVLRDKLKAIH--LVD------EL- 116
Query: 97 LEKGKEVRLWVDESRR 112
+E G +VRL VD RR
Sbjct: 117 IEPGTQVRLNVDWGRR 132
Score = 78 (32.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 174 IPQGSTPRIVKLGDNPGCPCGGTHVSDISEIISMKV-SQIRTKKGTTKVFYSVG 226
+ QG RIVK+G+ PC GTH++ ++I S+ + Q + G +++++ G
Sbjct: 237 LSQGGIIRIVKIGELDANPCCGTHLTSTAQIQSIALLHQSPIRGGHSRLYFICG 290
>SGD|S000005862 [details] [associations]
symbol:ALA1 "Cytoplasmic and mitochondrial alanyl-tRNA
synthetase" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0004813 "alanine-tRNA ligase activity"
evidence=IEA;IGI;ISS] [GO:0006419 "alanyl-tRNA aminoacylation"
evidence=IEA;IGI;IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016876 "ligase
activity, forming aminoacyl-tRNA and related compounds"
evidence=IEA] [GO:0043039 "tRNA aminoacylation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0070143 "mitochondrial alanyl-tRNA
aminoacylation" evidence=IC] InterPro:IPR002318 InterPro:IPR003156
InterPro:IPR012947 InterPro:IPR018162 InterPro:IPR018163
InterPro:IPR018164 InterPro:IPR018165 InterPro:IPR023033
Pfam:PF01411 Pfam:PF02272 Pfam:PF07973 PRINTS:PR00980
PROSITE:PS50860 SMART:SM00863 SGD:S000005862 GO:GO:0005739
GO:GO:0005524 EMBL:BK006948 GO:GO:0046872 GO:GO:0004813
SUPFAM:SSF55186 GO:GO:0000049 PANTHER:PTHR11777:SF6 EMBL:Z49821
eggNOG:COG0013 KO:K01872 OMA:EWFDFPK HAMAP:MF_00036_B
SUPFAM:SSF101353 TIGRFAMs:TIGR00344 GO:GO:0070143 OrthoDB:EOG44BF9B
EMBL:Z75243 EMBL:U18672 PIR:S62065 RefSeq:NP_014980.3
RefSeq:NP_014982.3 ProteinModelPortal:P40825 DIP:DIP-6286N
IntAct:P40825 MINT:MINT-688621 STRING:P40825 PaxDb:P40825
PeptideAtlas:P40825 GeneID:854513 GeneID:854515 KEGG:sce:YOR335C
KEGG:sce:YOR337W CYGD:YOR335c NextBio:976870 Genevestigator:P40825
GermOnline:YOR335C Uniprot:P40825
Length = 983
Score = 111 (44.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 16 MLKLQSTSKLISYFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVHDVRS 75
+LKL + + + +IL+ T F+ + GGQ DTG I++ D+ +F V +V+
Sbjct: 529 ILKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIVIDDAA-EFNVENVQL 587
Query: 76 KDGIVFHYGVVENSGGEFEMELEKGKEVRLWVDESRR 112
+G VFH G +E E +L G ++ DE RR
Sbjct: 588 YNGFVFHTGSLE------EGKLSVGDKIIASFDELRR 618
Score = 46 (21.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 193 CGGTHVS---DISEIISMKVSQIRTKKGTTKVFYSVGS 227
CGGTHV+ DI + ++ S I KG ++ G+
Sbjct: 744 CGGTHVNKTGDIKYFVILEESGIA--KGIRRIVAVTGT 779
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 227 227 0.00079 113 3 11 22 0.44 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 588 (63 KB)
Total size of DFA: 168 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.55u 0.11s 21.66t Elapsed: 00:00:01
Total cpu time: 21.55u 0.11s 21.66t Elapsed: 00:00:01
Start: Mon May 20 22:01:59 2013 End: Mon May 20 22:02:00 2013