Query 027169
Match_columns 227
No_of_seqs 118 out of 1408
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:59:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027169.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027169hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 3.5E-27 7.6E-32 204.5 21.5 205 2-207 128-337 (358)
2 PRK11453 O-acetylserine/cystei 99.9 1.5E-24 3.4E-29 184.4 18.0 182 2-201 104-290 (299)
3 PRK11689 aromatic amino acid e 99.9 3.6E-23 7.9E-28 175.7 15.3 182 2-201 109-290 (295)
4 PRK11272 putative DMT superfam 99.9 1.1E-22 2.4E-27 172.5 17.4 173 5-201 116-288 (292)
5 TIGR00950 2A78 Carboxylate/Ami 99.9 5.4E-22 1.2E-26 165.0 16.8 169 2-194 91-260 (260)
6 PRK10532 threonine and homoser 99.9 1.6E-21 3.5E-26 165.4 18.5 171 7-203 116-286 (293)
7 TIGR00817 tpt Tpt phosphate/ph 99.9 4.8E-22 1E-26 169.2 13.9 182 2-205 109-300 (302)
8 PF06027 DUF914: Eukaryotic pr 99.9 6.5E-21 1.4E-25 162.8 14.6 191 2-207 123-314 (334)
9 PRK15430 putative chlorampheni 99.9 1.3E-20 2.8E-25 160.1 14.9 170 2-200 117-287 (296)
10 TIGR03340 phn_DUF6 phosphonate 99.8 7.7E-21 1.7E-25 160.3 12.3 170 2-195 107-280 (281)
11 PTZ00343 triose or hexose phos 99.8 2E-18 4.3E-23 149.9 14.5 176 2-199 158-349 (350)
12 COG0697 RhaT Permeases of the 99.8 2.7E-17 5.9E-22 137.9 17.6 170 4-199 117-288 (292)
13 COG2510 Predicted membrane pro 99.7 6.3E-16 1.4E-20 112.2 12.1 136 60-198 4-139 (140)
14 PF00892 EamA: EamA-like trans 99.7 2.9E-16 6.3E-21 115.7 9.7 125 69-197 1-125 (126)
15 KOG2765 Predicted membrane pro 99.7 8E-16 1.7E-20 130.1 11.1 190 3-205 204-397 (416)
16 TIGR00776 RhaT RhaT L-rhamnose 99.6 3.6E-15 7.7E-20 126.4 13.5 174 2-199 104-289 (290)
17 KOG4510 Permease of the drug/m 99.6 2.5E-16 5.4E-21 127.8 3.3 187 2-201 141-328 (346)
18 COG5006 rhtA Threonine/homoser 99.6 4.6E-14 1E-18 113.8 15.2 170 11-203 118-287 (292)
19 TIGR00688 rarD rarD protein. T 99.6 3.2E-14 6.9E-19 118.3 14.1 142 2-173 114-255 (256)
20 PF08449 UAA: UAA transporter 99.5 2.7E-13 5.8E-18 115.6 15.5 192 1-204 107-303 (303)
21 COG2962 RarD Predicted permeas 99.5 5.6E-13 1.2E-17 109.9 14.7 171 2-201 116-286 (293)
22 PRK15430 putative chlorampheni 99.5 1.4E-12 3E-17 110.9 14.3 140 56-198 5-145 (296)
23 TIGR00688 rarD rarD protein. T 99.4 7.1E-12 1.5E-16 104.2 14.0 136 60-198 3-142 (256)
24 TIGR03340 phn_DUF6 phosphonate 99.4 3.2E-11 6.9E-16 101.7 15.0 134 61-199 3-136 (281)
25 PRK02971 4-amino-4-deoxy-L-ara 99.3 6.7E-11 1.4E-15 88.2 14.0 122 60-202 3-126 (129)
26 PLN00411 nodulin MtN21 family 99.3 2.4E-10 5.2E-15 99.5 15.8 140 59-200 13-158 (358)
27 PF03151 TPT: Triose-phosphate 99.2 5E-10 1.1E-14 85.7 13.6 138 60-198 1-153 (153)
28 KOG2766 Predicted membrane pro 99.2 3E-12 6.5E-17 103.6 0.9 177 2-197 122-298 (336)
29 PRK11272 putative DMT superfam 99.2 7.9E-10 1.7E-14 93.8 15.6 132 61-199 10-142 (292)
30 TIGR00950 2A78 Carboxylate/Ami 99.2 6.2E-10 1.4E-14 92.4 12.6 120 71-199 1-120 (260)
31 PRK11453 O-acetylserine/cystei 99.2 1.5E-09 3.2E-14 92.4 15.2 127 61-199 6-133 (299)
32 PRK11689 aromatic amino acid e 99.1 1.3E-09 2.9E-14 92.6 14.0 131 59-199 4-138 (295)
33 PF13536 EmrE: Multidrug resis 99.1 4.6E-10 1E-14 82.0 9.6 107 94-201 3-109 (113)
34 PF04142 Nuc_sug_transp: Nucle 99.1 3.3E-09 7.2E-14 87.7 14.5 182 2-189 61-244 (244)
35 TIGR00817 tpt Tpt phosphate/ph 99.0 8.5E-09 1.8E-13 87.8 14.5 121 73-197 16-136 (302)
36 PTZ00343 triose or hexose phos 99.0 3.4E-08 7.3E-13 86.0 16.8 127 70-198 60-186 (350)
37 PRK15051 4-amino-4-deoxy-L-ara 98.9 1.5E-08 3.1E-13 73.8 10.9 68 131-198 42-109 (111)
38 KOG1580 UDP-galactose transpor 98.9 3.7E-08 7.9E-13 79.3 13.6 184 2-200 129-315 (337)
39 KOG2234 Predicted UDP-galactos 98.9 1.9E-07 4.1E-12 79.4 17.7 190 3-203 137-327 (345)
40 COG0697 RhaT Permeases of the 98.8 2.2E-07 4.8E-12 77.6 16.0 143 57-203 5-148 (292)
41 KOG1441 Glucose-6-phosphate/ph 98.8 3.4E-09 7.4E-14 90.1 4.1 182 1-205 126-314 (316)
42 TIGR00803 nst UDP-galactose tr 98.8 3.3E-08 7.1E-13 80.5 9.7 192 2-195 22-221 (222)
43 COG2962 RarD Predicted permeas 98.8 1E-07 2.2E-12 79.1 11.9 141 57-200 5-146 (293)
44 KOG1581 UDP-galactose transpor 98.8 6.4E-08 1.4E-12 80.6 10.6 189 1-202 126-317 (327)
45 PRK10532 threonine and homoser 98.7 9.8E-07 2.1E-11 74.9 15.0 130 55-198 8-137 (293)
46 TIGR00776 RhaT RhaT L-rhamnose 98.6 6.1E-07 1.3E-11 76.1 12.4 132 60-200 2-138 (290)
47 KOG1583 UDP-N-acetylglucosamin 98.6 8E-07 1.7E-11 73.2 10.8 194 1-197 108-313 (330)
48 KOG1444 Nucleotide-sugar trans 98.5 2.1E-06 4.4E-11 72.3 12.3 182 1-206 120-308 (314)
49 COG5070 VRG4 Nucleotide-sugar 98.5 3.9E-07 8.4E-12 72.9 7.3 187 1-203 111-301 (309)
50 KOG3912 Predicted integral mem 98.5 1.1E-06 2.5E-11 72.5 9.9 183 4-197 132-333 (372)
51 PRK10452 multidrug efflux syst 98.5 1.1E-06 2.4E-11 64.5 8.6 70 132-201 36-106 (120)
52 PF06027 DUF914: Eukaryotic pr 98.4 7.6E-06 1.6E-10 70.5 14.3 141 60-202 14-155 (334)
53 KOG4510 Permease of the drug/m 98.4 9E-08 2E-12 78.4 0.6 140 56-203 35-174 (346)
54 PF06800 Sugar_transport: Suga 98.3 2.6E-05 5.6E-10 65.0 14.6 169 3-195 91-268 (269)
55 PRK09541 emrE multidrug efflux 98.3 4E-06 8.6E-11 60.7 8.5 69 132-200 36-105 (110)
56 PF04657 DUF606: Protein of un 98.2 6.1E-05 1.3E-09 56.9 13.4 131 61-195 3-138 (138)
57 COG2076 EmrE Membrane transpor 98.2 1.5E-05 3.2E-10 56.9 8.0 65 135-199 39-104 (106)
58 PF05653 Mg_trans_NIPA: Magnes 98.1 3E-06 6.5E-11 72.2 5.0 193 2-203 94-297 (300)
59 KOG1582 UDP-galactose transpor 98.1 5.9E-05 1.3E-09 62.3 12.2 182 2-201 150-335 (367)
60 PRK11431 multidrug efflux syst 98.1 2.3E-05 5E-10 56.2 8.1 66 133-198 36-102 (105)
61 PRK10650 multidrug efflux syst 98.1 2.3E-05 5.1E-10 56.6 7.7 63 135-197 44-107 (109)
62 PF08449 UAA: UAA transporter 98.0 0.00023 5E-09 60.7 14.6 126 74-205 15-143 (303)
63 KOG1443 Predicted integral mem 98.0 0.00014 3.1E-09 61.0 12.7 171 6-198 132-315 (349)
64 PF05653 Mg_trans_NIPA: Magnes 98.0 5.5E-05 1.2E-09 64.5 10.6 121 55-199 3-123 (300)
65 KOG1442 GDP-fucose transporter 98.0 4.9E-06 1.1E-10 68.6 3.4 187 2-207 146-336 (347)
66 COG3238 Uncharacterized protei 97.9 0.00041 8.9E-09 52.7 12.7 140 58-200 4-148 (150)
67 KOG4314 Predicted carbohydrate 97.7 8.5E-05 1.8E-09 58.7 6.2 179 2-201 97-279 (290)
68 PF00893 Multi_Drug_Res: Small 97.7 0.00014 3E-09 51.1 6.2 57 133-189 36-93 (93)
69 PF04142 Nuc_sug_transp: Nucle 97.6 0.00056 1.2E-08 56.6 9.1 68 136-203 27-94 (244)
70 PF06800 Sugar_transport: Suga 97.5 0.0016 3.4E-08 54.5 10.6 107 95-205 18-129 (269)
71 PRK13499 rhamnose-proton sympo 97.4 0.025 5.5E-07 49.1 17.5 177 12-199 135-342 (345)
72 PF10639 UPF0546: Uncharacteri 97.3 0.0017 3.7E-08 47.0 7.8 109 66-196 3-112 (113)
73 PRK13499 rhamnose-proton sympo 97.3 0.0024 5.3E-08 55.3 10.2 137 56-199 4-154 (345)
74 KOG1441 Glucose-6-phosphate/ph 97.3 0.00052 1.1E-08 58.7 5.7 127 71-200 29-157 (316)
75 KOG2922 Uncharacterized conser 96.4 0.0015 3.2E-08 55.4 1.5 196 2-206 108-314 (335)
76 COG4975 GlcU Putative glucose 96.3 0.0014 3E-08 53.6 1.0 132 60-201 3-139 (288)
77 KOG4314 Predicted carbohydrate 96.2 0.003 6.6E-08 50.0 2.0 66 138-203 65-130 (290)
78 KOG2765 Predicted membrane pro 96.1 0.0065 1.4E-07 52.6 3.7 68 136-203 169-236 (416)
79 COG4975 GlcU Putative glucose 95.6 0.0018 3.8E-08 53.0 -1.4 177 4-199 106-286 (288)
80 KOG2234 Predicted UDP-galactos 95.4 1.1 2.4E-05 38.8 14.6 141 59-199 15-165 (345)
81 PF06379 RhaT: L-rhamnose-prot 95.3 0.16 3.4E-06 43.8 9.3 143 56-201 4-156 (344)
82 KOG2922 Uncharacterized conser 95.1 0.011 2.4E-07 50.2 1.6 127 53-203 15-141 (335)
83 PF07857 DUF1632: CEO family ( 94.2 0.15 3.2E-06 42.5 6.2 132 60-203 1-139 (254)
84 KOG3912 Predicted integral mem 94.1 0.13 2.8E-06 43.2 5.6 66 135-200 95-160 (372)
85 KOG1444 Nucleotide-sugar trans 94.1 1.6 3.5E-05 37.3 12.2 131 61-197 14-148 (314)
86 PRK02237 hypothetical protein; 93.8 0.52 1.1E-05 33.7 7.4 49 152-200 58-107 (109)
87 COG5006 rhtA Threonine/homoser 93.7 1.3 2.8E-05 36.8 10.6 102 60-170 13-115 (292)
88 PF02694 UPF0060: Uncharacteri 92.9 0.52 1.1E-05 33.6 6.2 51 151-201 55-106 (107)
89 KOG1443 Predicted integral mem 92.7 0.37 7.9E-06 41.0 6.1 125 76-201 33-159 (349)
90 PF04342 DUF486: Protein of un 92.2 0.14 3.1E-06 36.3 2.7 31 167-197 77-107 (108)
91 COG3169 Uncharacterized protei 90.4 0.39 8.5E-06 33.7 3.4 32 167-198 84-115 (116)
92 PRK09541 emrE multidrug efflux 88.9 0.19 4.1E-06 36.3 0.9 28 2-29 75-102 (110)
93 KOG1442 GDP-fucose transporter 88.7 0.65 1.4E-05 39.0 4.0 115 85-200 58-176 (347)
94 PRK10452 multidrug efflux syst 88.4 0.2 4.4E-06 36.8 0.8 28 2-29 75-102 (120)
95 KOG2766 Predicted membrane pro 86.9 0.071 1.5E-06 44.1 -2.5 134 58-202 21-154 (336)
96 PF07168 Ureide_permease: Urei 85.8 0.51 1.1E-05 40.1 1.9 131 64-197 1-145 (336)
97 PF05977 MFS_3: Transmembrane 84.0 36 0.00077 31.5 16.0 41 156-196 350-390 (524)
98 KOG1580 UDP-galactose transpor 83.8 2.9 6.4E-05 34.4 5.4 68 136-203 95-162 (337)
99 PF06379 RhaT: L-rhamnose-prot 82.9 31 0.00067 30.0 12.6 180 8-198 131-340 (344)
100 KOG1581 UDP-galactose transpor 79.3 38 0.00083 29.0 10.6 110 88-203 51-160 (327)
101 COG3086 RseC Positive regulato 77.3 3.3 7.1E-05 31.3 3.4 27 147-173 69-95 (150)
102 KOG1583 UDP-N-acetylglucosamin 75.6 2.5 5.5E-05 35.6 2.6 66 141-206 79-145 (330)
103 PF15102 TMEM154: TMEM154 prot 75.6 3.2 6.9E-05 31.4 2.9 29 185-213 68-96 (146)
104 COG1742 Uncharacterized conser 75.4 14 0.00031 26.3 5.9 45 156-200 62-106 (109)
105 KOG4831 Unnamed protein [Funct 73.7 6 0.00013 28.3 3.8 59 138-197 64-124 (125)
106 PRK06638 NADH:ubiquinone oxido 71.6 50 0.0011 26.3 11.6 35 167-201 133-169 (198)
107 PF06123 CreD: Inner membrane 71.5 78 0.0017 28.6 12.5 102 58-174 299-400 (430)
108 PRK13108 prolipoprotein diacyl 70.9 28 0.00062 31.6 8.4 47 154-200 225-276 (460)
109 PF07857 DUF1632: CEO family ( 67.0 55 0.0012 27.3 8.7 75 11-85 115-209 (254)
110 PF04246 RseC_MucC: Positive r 67.0 3 6.5E-05 31.0 1.2 26 148-173 63-88 (135)
111 PRK10862 SoxR reducing system 64.4 6.3 0.00014 30.2 2.5 26 148-173 70-95 (154)
112 PRK11715 inner membrane protei 63.9 1.1E+02 0.0025 27.6 11.8 100 58-172 305-404 (436)
113 PF15471 TMEM171: Transmembran 60.0 12 0.00027 31.2 3.6 26 181-206 162-187 (319)
114 TIGR00905 2A0302 transporter, 58.9 77 0.0017 28.6 9.0 44 158-202 394-438 (473)
115 PF08507 COPI_assoc: COPI asso 57.0 17 0.00038 27.0 3.8 14 183-196 90-103 (136)
116 PRK05122 major facilitator sup 56.4 1.3E+02 0.0028 25.9 14.3 35 164-198 353-387 (399)
117 COG4657 RnfA Predicted NADH:ub 55.0 56 0.0012 25.4 6.1 49 57-105 130-183 (193)
118 PF03547 Mem_trans: Membrane t 52.7 1.6E+02 0.0034 25.6 11.1 9 191-199 140-148 (385)
119 PRK11010 ampG muropeptide tran 52.4 1.8E+02 0.0039 26.3 13.8 49 148-198 347-401 (491)
120 PF09656 PGPGW: Putative trans 49.3 62 0.0013 20.0 5.2 46 13-84 4-49 (53)
121 PRK15049 L-asparagine permease 48.9 2.1E+02 0.0046 26.1 12.0 11 88-98 352-362 (499)
122 TIGR03810 arg_ornith_anti argi 47.8 2.1E+02 0.0046 25.7 10.2 20 181-200 412-431 (468)
123 PF12606 RELT: Tumour necrosis 47.0 33 0.00071 21.0 3.1 16 188-203 13-28 (50)
124 PF15099 PIRT: Phosphoinositid 46.1 7.6 0.00016 28.6 0.3 17 126-142 57-73 (129)
125 TIGR01167 LPXTG_anchor LPXTG-m 46.0 21 0.00045 19.3 2.1 18 178-195 10-27 (34)
126 TIGR00892 2A0113 monocarboxyla 45.5 2.2E+02 0.0048 25.3 11.8 15 198-212 426-440 (455)
127 TIGR02840 spore_YtaF putative 44.8 45 0.00097 26.8 4.6 47 151-197 32-80 (206)
128 PF13127 DUF3955: Protein of u 44.5 70 0.0015 20.5 4.6 28 57-84 4-31 (63)
129 TIGR00881 2A0104 phosphoglycer 44.4 1.9E+02 0.004 24.1 12.0 20 67-86 39-58 (379)
130 PRK10489 enterobactin exporter 42.2 2.3E+02 0.005 24.6 15.3 37 162-200 361-400 (417)
131 PRK12437 prolipoprotein diacyl 42.1 1.5E+02 0.0033 24.8 7.5 47 154-200 206-257 (269)
132 PF01102 Glycophorin_A: Glycop 38.4 20 0.00043 26.4 1.5 17 185-201 76-92 (122)
133 COG5336 Uncharacterized protei 36.8 1.6E+02 0.0035 21.2 5.8 49 151-201 44-97 (116)
134 PRK11469 hypothetical protein; 36.3 38 0.00081 26.8 2.9 43 155-197 43-86 (188)
135 TIGR00840 b_cpa1 sodium/hydrog 36.1 3.6E+02 0.0077 25.3 9.6 43 58-101 9-51 (559)
136 TIGR01299 synapt_SV2 synaptic 35.5 4.3E+02 0.0093 25.8 14.7 45 62-107 599-643 (742)
137 COG4736 CcoQ Cbb3-type cytochr 34.9 26 0.00057 22.3 1.4 20 186-205 18-37 (60)
138 PF04306 DUF456: Protein of un 34.7 2E+02 0.0042 21.6 8.7 70 123-202 31-101 (140)
139 PF07123 PsbW: Photosystem II 34.1 46 0.001 24.9 2.8 33 53-85 100-132 (138)
140 PF15048 OSTbeta: Organic solu 33.8 60 0.0013 23.9 3.3 28 171-198 25-56 (125)
141 PRK11902 ampG muropeptide tran 33.6 3.2E+02 0.0068 23.6 14.3 20 181-200 371-390 (402)
142 PF06609 TRI12: Fungal trichot 32.6 4.4E+02 0.0095 25.0 13.5 25 6-30 232-256 (599)
143 MTH00057 ND6 NADH dehydrogenas 32.3 2.5E+02 0.0054 22.1 10.0 35 167-201 132-168 (186)
144 PRK10435 cadB lysine/cadaverin 32.2 3.6E+02 0.0079 23.9 10.9 75 125-201 351-426 (435)
145 PF08507 COPI_assoc: COPI asso 32.1 51 0.0011 24.4 2.9 28 163-198 85-112 (136)
146 TIGR00803 nst UDP-galactose tr 31.8 28 0.0006 27.9 1.5 46 156-201 8-53 (222)
147 TIGR00966 3a0501s07 protein-ex 30.9 2.1E+02 0.0045 23.5 6.6 41 150-190 121-161 (246)
148 PF10754 DUF2569: Protein of u 30.2 1.5E+02 0.0032 22.3 5.2 29 56-84 118-146 (149)
149 PRK00052 prolipoprotein diacyl 29.6 2.6E+02 0.0056 23.4 7.0 47 154-200 208-259 (269)
150 PRK11387 S-methylmethionine tr 29.5 4.2E+02 0.0091 23.8 9.4 20 182-201 438-457 (471)
151 PF11044 TMEMspv1-c74-12: Plec 29.4 24 0.00052 20.9 0.5 17 178-194 2-18 (49)
152 PF11295 DUF3096: Protein of u 28.6 33 0.00072 19.8 1.0 33 163-195 1-33 (39)
153 CHL00196 psbY photosystem II p 28.4 85 0.0018 17.8 2.6 22 59-80 6-27 (36)
154 PF08693 SKG6: Transmembrane a 27.7 48 0.001 19.3 1.6 17 184-200 21-37 (40)
155 PF15345 TMEM51: Transmembrane 27.5 48 0.001 27.1 2.1 23 184-206 67-89 (233)
156 TIGR00544 lgt prolipoprotein d 27.4 3.5E+02 0.0076 22.7 7.5 47 154-200 213-268 (278)
157 PRK13022 secF preprotein trans 27.3 2.6E+02 0.0057 23.6 6.7 45 150-195 150-194 (289)
158 PRK10655 potE putrescine trans 26.8 4.5E+02 0.0097 23.3 9.5 38 161-198 389-426 (438)
159 PRK13021 secF preprotein trans 26.7 2.6E+02 0.0057 23.9 6.6 44 151-195 150-193 (297)
160 PF06781 UPF0233: Uncharacteri 26.5 1.4E+02 0.0031 20.5 4.0 57 123-199 30-86 (87)
161 PRK10599 calcium/sodium:proton 26.4 4.6E+02 0.0099 23.2 15.9 85 63-150 44-131 (366)
162 PRK11357 frlA putative fructos 26.2 4.3E+02 0.0093 23.5 8.3 41 160-201 391-436 (445)
163 PRK10644 arginine:agmatin anti 25.9 4.7E+02 0.01 23.2 10.7 68 128-196 353-424 (445)
164 COG2814 AraJ Arabinose efflux 25.8 4.8E+02 0.01 23.3 13.3 42 164-205 350-391 (394)
165 PF05961 Chordopox_A13L: Chord 25.5 94 0.002 20.2 2.7 23 182-204 6-29 (68)
166 PRK09579 multidrug efflux prot 25.0 2.9E+02 0.0062 28.0 7.5 31 164-195 882-912 (1017)
167 PRK10473 multidrug efflux syst 24.9 4.4E+02 0.0095 22.5 14.6 17 157-173 331-347 (392)
168 PF11381 DUF3185: Protein of u 24.7 1.9E+02 0.0042 18.3 4.4 16 14-29 1-16 (59)
169 PRK09577 multidrug efflux prot 24.4 2.9E+02 0.0063 28.0 7.4 33 163-196 902-934 (1032)
170 PF10177 DUF2371: Uncharacteri 23.1 1.3E+02 0.0029 22.7 3.6 16 182-197 43-58 (141)
171 PF04277 OAD_gamma: Oxaloaceta 23.0 1.7E+02 0.0036 19.2 3.9 8 183-190 9-16 (79)
172 PF07444 Ycf66_N: Ycf66 protei 22.7 60 0.0013 22.2 1.6 24 177-200 4-27 (84)
173 TIGR02611 conserved hypothetic 22.5 2.9E+02 0.0063 20.3 5.1 44 14-83 29-72 (121)
174 PF04632 FUSC: Fusaric acid re 22.1 4.6E+02 0.01 24.6 8.0 18 12-29 50-67 (650)
175 PF09945 DUF2177: Predicted me 21.4 3.5E+02 0.0075 20.0 8.4 44 62-107 79-122 (128)
176 PRK02251 putative septation in 21.4 2.9E+02 0.0062 19.1 5.7 20 179-198 66-85 (87)
177 PF13038 DUF3899: Domain of un 21.2 60 0.0013 22.2 1.4 18 180-197 4-21 (92)
178 COG2034 Predicted membrane pro 21.0 1.1E+02 0.0023 21.0 2.5 25 181-205 14-38 (85)
179 PRK09528 lacY galactoside perm 20.9 5.5E+02 0.012 22.2 13.4 6 167-172 370-375 (420)
180 COG4858 Uncharacterized membra 20.9 4.4E+02 0.0096 21.1 11.4 47 125-171 127-175 (226)
181 PF05255 UPF0220: Uncharacteri 20.7 1.7E+02 0.0036 22.7 3.9 24 9-32 56-79 (166)
182 PF11446 DUF2897: Protein of u 20.7 91 0.002 19.5 2.0 15 187-201 14-28 (55)
183 TIGR01998 PTS-II-BC-nag PTS sy 20.5 3.2E+02 0.007 25.0 6.3 30 123-152 348-377 (476)
184 PF02659 DUF204: Domain of unk 20.5 1.1E+02 0.0024 19.4 2.5 38 152-189 26-63 (67)
185 PRK10921 twin-arginine protein 20.4 1.3E+02 0.0029 25.1 3.5 23 183-205 217-242 (258)
186 COG1971 Predicted membrane pro 20.3 91 0.002 24.8 2.4 42 156-197 44-86 (190)
187 PRK10054 putative transporter; 20.2 5.7E+02 0.012 22.1 13.9 29 58-87 44-72 (395)
188 PRK10110 bifunctional PTS syst 20.1 4.3E+02 0.0093 24.6 7.1 29 124-152 396-424 (530)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=3.5e-27 Score=204.48 Aligned_cols=205 Identities=36% Similarity=0.673 Sum_probs=155.3
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCC--CCCCC-CCCC-CCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFS--SPSNS-NIQL-PVSEYSNWALGGLLLTVTCFSSATWKIF 77 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~--~~~~~-~~~~-~~~~~~~~~~G~l~~l~aa~~~a~~~vl 77 (227)
|.+-+|||++++|++|++++++|+.++...+++.....+ .+.|. +... ......+...|++++++++++||.|+++
T Consensus 128 e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il 207 (358)
T PLN00411 128 EKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFIL 207 (358)
T ss_pred chhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 445579999999999999999999998754443211000 00000 0000 0111233467999999999999999999
Q ss_pred HHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcC-CCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhh
Q 027169 78 QAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVER-NPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVA 156 (227)
Q Consensus 78 ~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~-~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s 156 (227)
.|+..+++|++...++|+++++++.+.+.+...++ +...|....+.....++|.+++ +.++|.+|++++++.+|++++
T Consensus 208 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as 286 (358)
T PLN00411 208 QAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLA 286 (358)
T ss_pred HHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHH
Confidence 99998898755677888899888888777766543 2233322223335567888875 668999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccccc
Q 027169 157 LFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 207 (227)
Q Consensus 157 ~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~~~ 207 (227)
++.+++|+++++++++++||++++.+++|+++|++|+++..+.++||.+++
T Consensus 287 ~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~ 337 (358)
T PLN00411 287 IFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQ 337 (358)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence 999999999999999999999999999999999999999998877765443
No 2
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.93 E-value=1.5e-24 Score=184.37 Aligned_cols=182 Identities=20% Similarity=0.249 Sum_probs=143.7
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+++++|||+++++++|++++++|+.++.. +. .+ +......|+++++.++++|+.|.++.|+.
T Consensus 104 ~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~--~~-~~---------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 104 GAFTFGERLQGKQLAGIALAIFGVLVLIE--DS-LN---------------GQHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred HHHHhcCcCcHHHHHHHHHHHHhHHHhcc--cc-CC---------------CcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999852 11 00 01123469999999999999999999998
Q ss_pred HhhcCcc--chHHHHHHHHHHHHHHHHHHHhcCCC---CCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhh
Q 027169 82 LKEYPDK--INLVFFSCFFGTIQCAVVSIIVERNP---SAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVA 156 (227)
Q Consensus 82 ~~~~~~p--~~~~~~~~l~g~i~~~~~~~~~~~~~---~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s 156 (227)
.++.+++ .....++++.+.+.+...+...++.. ..+...+...|..++|+++++++++|.+|++++++.++++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s 245 (299)
T PRK11453 166 MSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVA 245 (299)
T ss_pred hcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 6655432 34456666666655555444333221 111222335699999999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 157 LFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 157 ~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
.+.+++|+++.+++++++||++++.+++|++++++|+++..+.++
T Consensus 246 ~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 246 PLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999999999999877654
No 3
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.90 E-value=3.6e-23 Score=175.65 Aligned_cols=182 Identities=13% Similarity=0.031 Sum_probs=134.8
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
.++++|||+++++++|++++++|+.++... +.+.... +. .. ...+...|+++++.++++||.|+++.|+.
T Consensus 109 ~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~-~~~~~~~-------~~-~~-~~~~~~~G~~~~l~aa~~~A~~~v~~k~~ 178 (295)
T PRK11689 109 AVLFNGQKANWLLIPGLLLALAGVAWVLGG-DNGLSLA-------EL-IN-NIASNPLSYGLAFIGAFIWAAYCNVTRKY 178 (295)
T ss_pred HHHHhcCCccHHHHHHHHHHHHhHhheecC-Cccchhh-------hh-hh-ccccChHHHHHHHHHHHHHHHHHHHHhhc
Confidence 457889999999999999999999998621 1100000 00 00 00123469999999999999999999998
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhch
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPL 161 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~ 161 (227)
.++.+ |..... ..+++.+.+.....+ .. ... .+...|..+++.++ +++++|.+|++++|+.++++++.+.++
T Consensus 179 ~~~~~-~~~~~~---~~~~~~l~~~~~~~~-~~-~~~-~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l 250 (295)
T PRK11689 179 ARGKN-GITLFF---ILTALALWIKYFLSP-QP-AMV-FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYF 250 (295)
T ss_pred cCCCC-chhHHH---HHHHHHHHHHHHHhc-Cc-ccc-CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHh
Confidence 77765 454422 333334433333322 11 111 12246778888885 789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 162 GTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 162 ~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
+|+++++++++++||++++.+++|+++|+.|+++..+.++
T Consensus 251 ~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 251 TPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 9999999999999999999999999999999988865543
No 4
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.90 E-value=1.1e-22 Score=172.47 Aligned_cols=173 Identities=17% Similarity=0.179 Sum_probs=143.3
Q ss_pred cccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027169 5 AIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKE 84 (227)
Q Consensus 5 ~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~ 84 (227)
++|||+++++++|++++++|+.++... .. .+....|+++.++++++||.|.+..|+..++
T Consensus 116 ~~~e~~~~~~~~~~~la~~Gv~ll~~~--~~------------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~ 175 (292)
T PRK11272 116 LFGIRTRKLEWLGIAIGLAGIVLLNSG--GN------------------LSGNPWGAILILIASASWAFGSVWSSRLPLP 175 (292)
T ss_pred HhcccCchhHHHHHHHHHHhHHHHhcC--cc------------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 369999999999999999999887421 10 0123469999999999999999999997543
Q ss_pred cCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHH
Q 027169 85 YPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTA 164 (227)
Q Consensus 85 ~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv 164 (227)
+ +...+.+++.++++.+.++....+.... ...+...|..+++++++++.++|.+|++++++.++++++.+.+++|+
T Consensus 176 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi 251 (292)
T PRK11272 176 -V-GMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPV 251 (292)
T ss_pred -c-chHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 3 3667788899998888777654332211 11223568899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 165 IAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 165 ~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
++++++++++||++++.+++|+++++.|+++..++++
T Consensus 252 ~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 252 VAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999876554
No 5
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.89 E-value=5.4e-22 Score=164.99 Aligned_cols=169 Identities=20% Similarity=0.261 Sum_probs=140.9
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+.+++|||+++++++|++++++|++++. ..+. .+....|++++++++++|+.+.++.|+.
T Consensus 91 ~~l~~~e~~~~~~~~gi~i~~~Gv~li~-~~~~-------------------~~~~~~G~~~~l~a~~~~a~~~~~~k~~ 150 (260)
T TIGR00950 91 SDLMGKERPRKLVLLAAVLGLAGAVLLL-SDGN-------------------LSINPAGLLLGLGSGISFALGTVLYKRL 150 (260)
T ss_pred HHHHccCCCcHHHHHHHHHHHHhHHhhc-cCCc-------------------ccccHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4678999999999999999999999985 2110 1224679999999999999999999999
Q ss_pred HhhcCc-cchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhc
Q 027169 82 LKEYPD-KINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKP 160 (227)
Q Consensus 82 ~~~~~~-p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~ 160 (227)
.++.+. +.....+++..+.+++.+..+..++.. .. +...|..+++++++++.++|.+|++++++.++++++.+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~ 226 (260)
T TIGR00950 151 VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL 226 (260)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 877652 234555778888888888776543221 11 3346888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhh
Q 027169 161 LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFY 194 (227)
Q Consensus 161 ~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~ 194 (227)
++|+++++++++++||++++.+++|+++++.|+.
T Consensus 227 ~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 227 AEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999863
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.89 E-value=1.6e-21 Score=165.42 Aligned_cols=171 Identities=13% Similarity=0.056 Sum_probs=134.2
Q ss_pred cccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 027169 7 RSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP 86 (227)
Q Consensus 7 ~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~ 86 (227)
+||++ +..++.++++|+.++. ..+.+ .+.....|+++.+.++++||.|.++.|+..++.+
T Consensus 116 ~~~~~--~~~~~~i~~~Gv~li~-~~~~~-----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~ 175 (293)
T PRK10532 116 SRRPV--DFVWVVLAVLGLWFLL-PLGQD-----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG 175 (293)
T ss_pred cCChH--HHHHHHHHHHHHheee-ecCCC-----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 45554 4566788999998875 21111 0112357999999999999999999999987776
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHH
Q 027169 87 DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIA 166 (227)
Q Consensus 87 ~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a 166 (227)
|... .+..+++++++.++...... ... .....|..++|++++++.++|.+|++++++.++++++.+.+++|+++
T Consensus 176 -~~~~-~~~~~~~~~~l~~~~~~~~~---~~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a 249 (293)
T PRK10532 176 -PATV-AIGSLIAALIFVPIGALQAG---EAL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALA 249 (293)
T ss_pred -chHH-HHHHHHHHHHHHHHHHHccC---ccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHH
Confidence 4655 56677777777776654322 111 12235667789999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 167 VFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 167 ~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
++++++++||++++.+++|+++|++|++...+.+++|
T Consensus 250 ~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~ 286 (293)
T PRK10532 250 AVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE 286 (293)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999987766543
No 7
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.88 E-value=4.8e-22 Score=169.25 Aligned_cols=182 Identities=13% Similarity=0.134 Sum_probs=139.0
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+++++|||+++++++|++++++|+++.. . .+ .+....|+++.++++++|+.|.++.|+.
T Consensus 109 ~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~--~~------------------~~~~~~G~~~~l~a~~~~a~~~v~~k~~ 167 (302)
T TIGR00817 109 SAFFLGQEFPSTLWLSLLPIVGGVALAS-D--TE------------------LSFNWAGFLSAMISNITFVSRNIFSKKA 167 (302)
T ss_pred HHHHhCCCCcHHHHHHHHHHHHHHhhhc-C--Cc------------------ccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788999999999999999999998753 1 10 1123569999999999999999999998
Q ss_pred Hh--hcCccchHHHHHHHHHHHHHHHHHHHhcCCCCC---ccc-----cCchhHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 027169 82 LK--EYPDKINLVFFSCFFGTIQCAVVSIIVERNPSA---WKL-----QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKG 151 (227)
Q Consensus 82 ~~--~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~---~~~-----~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~ 151 (227)
.+ +.+ |...+.+++..+.+.+++++...+..... +.. .....+...++.++.+....+.++++++++.+
T Consensus 168 ~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s 246 (302)
T TIGR00817 168 MTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVS 246 (302)
T ss_pred hccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 77 666 69999999999999999988655431100 000 00011211222333233333346668999999
Q ss_pred chhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccc
Q 027169 152 PVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 152 ~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
|++.+++.+++|++++++|++++||++++.+++|+++++.|+++..+.|.+|++
T Consensus 247 a~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~ 300 (302)
T TIGR00817 247 PLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK 300 (302)
T ss_pred chHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence 999999999999999999999999999999999999999999999877654433
No 8
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.86 E-value=6.5e-21 Score=162.82 Aligned_cols=191 Identities=20% Similarity=0.236 Sum_probs=151.5
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
..+++|+|.++.|++|++++++|+.+++..+.. +++....+++...|+++++.++++||.++++.++.
T Consensus 123 S~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~------------~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~ 190 (334)
T PF06027_consen 123 SFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL------------SGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKL 190 (334)
T ss_pred HHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc------------ccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999998632111 01111234567999999999999999999999999
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHHHhcCC-CCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhc
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERN-PSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKP 160 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~ 160 (227)
.++.+ +.++..+..++|.++..+...+.+.. .... .++.....+.....++....|.++...++..+|+...+-..
T Consensus 191 v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~--~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLL 267 (334)
T PF06027_consen 191 VKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESI--HWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLL 267 (334)
T ss_pred cccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhcc--CCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHH
Confidence 99988 58999999999999998887766543 2221 12223333333334466778889999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccccc
Q 027169 161 LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 207 (227)
Q Consensus 161 ~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~~~ 207 (227)
+..+++++++++++|++++|..++|.++|+.|+++....++++.+++
T Consensus 268 Tsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~ 314 (334)
T PF06027_consen 268 TSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR 314 (334)
T ss_pred HhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence 99999999999999999999999999999999999987766554433
No 9
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.85 E-value=1.3e-20 Score=160.07 Aligned_cols=170 Identities=15% Similarity=0.189 Sum_probs=122.1
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+.+++|||+++++++|++++++|++++....+ . . .++.++++++||.|.+..|+.
T Consensus 117 ~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---------------------~-~---~~~~l~aa~~~a~~~i~~r~~ 171 (296)
T PRK15430 117 GMIFLGERFRRMQWLAVILAICGVLVQLWTFG---------------------S-L---PIIALGLAFSFAFYGLVRKKI 171 (296)
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---------------------C-c---cHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999862100 0 0 146788999999999999987
Q ss_pred HhhcC-ccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhc
Q 027169 82 LKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKP 160 (227)
Q Consensus 82 ~~~~~-~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~ 160 (227)
.++.. .+...+.+.+.++.+...+.. ......+...+...+..+++.++ .+.++|.+|++++++.+|+++|.+.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~ 247 (296)
T PRK15430 172 AVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQY 247 (296)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 53321 123334455555444332221 11111111111112333444455 67899999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 161 LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 161 ~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
++|+++++++++++||++++.+++|+++|++|+.+...+.
T Consensus 248 l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 248 IGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988887766443
No 10
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.85 E-value=7.7e-21 Score=160.30 Aligned_cols=170 Identities=12% Similarity=0.114 Sum_probs=127.2
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+++++|||+++++++|+.++++|+.++.. ++. . .....|..+++.++++|+.|.++.|+.
T Consensus 107 ~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~-~~~--~-----------------~~~~~g~~~~l~aal~~a~~~i~~k~~ 166 (281)
T TIGR03340 107 ATLTLGETLSPLAWLGILIITLGLLVLGL-SRF--A-----------------QHRRKAYAWALAAALGTAIYSLSDKAA 166 (281)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHhc-ccc--c-----------------ccchhHHHHHHHHHHHHHHhhhhcccc
Confidence 46789999999999999999999998852 110 0 112357889999999999999999986
Q ss_pred HhhcCccch----HHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 82 LKEYPDKIN----LVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 82 ~~~~~~p~~----~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
.++.+ |.. ...++++.+++.+.+.....+.. .+. .+...+..+++.+.+++.++|.+|++++++.++++++.
T Consensus 167 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~ 242 (281)
T TIGR03340 167 ALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVA 242 (281)
T ss_pred ccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEe
Confidence 55444 222 22333333322222222111111 111 12234667788898899999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhh
Q 027169 158 FKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
+.+++|+++++++++++||++++.+++|++++++|+++
T Consensus 243 ~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 243 LRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred ecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999876
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.79 E-value=2e-18 Score=149.88 Aligned_cols=176 Identities=13% Similarity=0.164 Sum_probs=138.8
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+++++|||++++++++++++++|+.+... + + .+....|++++++++++|+.|+++.|+.
T Consensus 158 s~~~l~ek~s~~~~l~l~l~v~Gv~l~~~--~-~------------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~ 216 (350)
T PTZ00343 158 SILFLKQFLNLYAYLSLIPIVGGVALASV--K-E------------------LHFTWLAFWCAMLSNLGSSLRSIFAKKT 216 (350)
T ss_pred HHHHhCCCccHHHHHHHHHHHHHHHheec--c-c------------------chhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999852 1 0 1124679999999999999999999998
Q ss_pred HhhcC------ccchHHHHHHHHHHHHHHHHHHHhcCCC--CCc----cccCchhHHHHHHHHHHHHHHHHHHHHH----
Q 027169 82 LKEYP------DKINLVFFSCFFGTIQCAVVSIIVERNP--SAW----KLQPGIQRTAVIYAAIVGTVIRSSIIAW---- 145 (227)
Q Consensus 82 ~~~~~------~p~~~~~~~~l~g~i~~~~~~~~~~~~~--~~~----~~~~~~~~~~li~l~v~~s~~~~~l~~~---- 145 (227)
.++.+ ++.....++.+.++++++|+..+.+... ..+ .......+..+++. ++.++++|.+|+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~ 295 (350)
T PTZ00343 217 MKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFY 295 (350)
T ss_pred hcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 76532 1355666668899999998886554311 011 00011123344554 5568999999995
Q ss_pred HHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 146 CLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 146 ~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
++++++|.+.+..+++.|++++++|++++||++++.+++|+++++.|++++.+.
T Consensus 296 ~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 296 CLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999998764
No 12
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.77 E-value=2.7e-17 Score=137.86 Aligned_cols=170 Identities=18% Similarity=0.230 Sum_probs=133.7
Q ss_pred ccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 027169 4 VAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSN-WALGGLLLTVTCFSSATWKIFQAAVL 82 (227)
Q Consensus 4 ~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~l~~l~aa~~~a~~~vl~k~~~ 82 (227)
+++|||++++++.++.++++|++++... +.. ... ...|+++.+.++++|+.+.+..|+..
T Consensus 117 ~~~~e~~~~~~~~~~~~~~~Gv~lv~~~---~~~----------------~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 117 LLLGERLSLLQILGILLALAGVLLILLG---GGG----------------GGILSLLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred HHccCCCcHHHHHHHHHHHHhHHheecC---CCc----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4569999999999999999999998621 110 011 46899999999999999999999887
Q ss_pred hhcCccchHHH-HHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhch
Q 027169 83 KEYPDKINLVF-FSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPL 161 (227)
Q Consensus 83 ~~~~~p~~~~~-~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~ 161 (227)
+.+ +..... ++.. .............. . .......|..+.+.+++++.+++.+|++++++.++.+++.+.++
T Consensus 178 -~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 250 (292)
T COG0697 178 -RLG-PVTLALLLQLL--LALLLLLLFFLSGF-G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLL 250 (292)
T ss_pred -CCC-hHHHHHHHHHH--HHHHHHHHHHhccc-c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 544 455555 4444 22222222111111 1 11223468899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 162 GTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 162 ~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
+|+++++++++++||+++..+++|+++++.|+.+..++
T Consensus 251 ~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 251 EPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998776
No 13
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.69 E-value=6.3e-16 Score=112.19 Aligned_cols=136 Identities=16% Similarity=0.130 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 139 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~ 139 (227)
..++++++++++++..++.|-..++.+ |...++.+.+...+.+..+.+...+.... .....+.|..++.-|+ +++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHH-HHHHH
Confidence 478899999999999999999999887 69999999999888888877665542111 1124467888888896 88999
Q ss_pred HHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 140 SSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 140 ~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
..+|++|+++.++.++..+.-+.|+++++++++++||+++..+|+|+.+|++|+.++.+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988654
No 14
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.68 E-value=2.9e-16 Score=115.69 Aligned_cols=125 Identities=22% Similarity=0.457 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 027169 69 FSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ 148 (227)
Q Consensus 69 ~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~ 148 (227)
++||.+.+..|+..++.+ |...++++++.+++ +++...+.+... ....+...+..+++.+++++.+++.+|+++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 478999999999999987 79999999999998 666665554322 12223456888899999888999999999999
Q ss_pred ccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 149 KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 149 ~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
+.++++++++.+++|+++.+++++++||++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998864
No 15
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.66 E-value=8e-16 Score=130.06 Aligned_cols=190 Identities=23% Similarity=0.324 Sum_probs=147.0
Q ss_pred cccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 027169 3 KVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVL 82 (227)
Q Consensus 3 ~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~ 82 (227)
.++-.||+++.|.+++.+++.|++++... +. . +......++...|+++++++|+.||+|.++.|+-.
T Consensus 204 ~if~~e~ft~sKllav~~si~GViiVt~~-~s-~-----------~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~ 270 (416)
T KOG2765|consen 204 AIFPVERFTLSKLLAVFVSIAGVIIVTMG-DS-K-----------QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKI 270 (416)
T ss_pred HHcCcchhhHHHHHHHHHhhccEEEEEec-cc-c-----------ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35668999999999999999999998621 11 0 11123456678999999999999999999999887
Q ss_pred hhcCccchHHHH---HHHHHHHHHHHHHHHhcC-CCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q 027169 83 KEYPDKINLVFF---SCFFGTIQCAVVSIIVER-NPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALF 158 (227)
Q Consensus 83 ~~~~~p~~~~~~---~~l~g~i~~~~~~~~~~~-~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~ 158 (227)
.+...-+.+... ..++..+.+.|..++... ..+.+..+...+...++..++++++++.++|.+|+-.++|..+.+-
T Consensus 271 ~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~Tlg 350 (416)
T KOG2765|consen 271 GDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLG 350 (416)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheee
Confidence 665312444333 333333444433333321 2344556566677888899999999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccc
Q 027169 159 KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 159 ~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
..++.+.|++.+.++-|.++++.+++|.+.|++|.+.+++..+...+
T Consensus 351 mSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~ 397 (416)
T KOG2765|consen 351 MSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKK 397 (416)
T ss_pred eeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccc
Confidence 99999999999999999999999999999999999999987654433
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.64 E-value=3.6e-15 Score=126.40 Aligned_cols=174 Identities=16% Similarity=0.192 Sum_probs=129.5
Q ss_pred ccccccccCcchh----hhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAK----ILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIF 77 (227)
Q Consensus 2 ~~~~l~e~~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl 77 (227)
+++++|||.++++ ++|+++.++|++++...+ .+ + .. +. +..+...|.++.++++++|+.|.+.
T Consensus 104 ~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~-~~---------~-~~-~~-~~~~~~~Gi~~~l~sg~~y~~~~~~ 170 (290)
T TIGR00776 104 GVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK-DK---------S-AG-IK-SEFNFKKGILLLLMSTIGYLVYVVV 170 (290)
T ss_pred HHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc-cc---------c-cc-cc-cccchhhHHHHHHHHHHHHHHHHHH
Confidence 4578999999999 999999999988874211 00 0 00 00 0022356999999999999999999
Q ss_pred HHHHHhhcCccchHHHHH---HHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHh-ccCch
Q 027169 78 QAAVLKEYPDKINLVFFS---CFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ-KKGPV 153 (227)
Q Consensus 78 ~k~~~~~~~~p~~~~~~~---~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~-~~~~~ 153 (227)
.|+. +++ |...++.+ .++++.+..+.. .+. .++ .+...|..++ .|++ ..+++.+|..+.+ +.+++
T Consensus 171 ~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~~~--~~~--~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~ 239 (290)
T TIGR00776 171 AKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--ILA--KPL--KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVA 239 (290)
T ss_pred HHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--hcc--cch--HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchh
Confidence 9976 355 68884444 444444433322 111 111 1223344444 8887 7999999999999 99999
Q ss_pred hhhhhhchHHHHHHHHHHHHhCCCCCchhh----hhHHHHHHHhhhhhcc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGETPHLGSL----IGTVVIAFGFYAVIWA 199 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~----iG~~li~~Gv~l~~~~ 199 (227)
+++.+.+.+|+.+++++++++||+.++.++ +|+++++.|+.+....
T Consensus 240 ~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 240 TSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999 9999999999987543
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.61 E-value=2.5e-16 Score=127.78 Aligned_cols=187 Identities=17% Similarity=0.187 Sum_probs=145.5
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
.++++||+.++...++.++.+.|+++++ +.+...++.+. ++..+.-+....|...++.++++.|.-.++.|+.
T Consensus 141 aw~~LkE~~t~~eaL~s~itl~GVVLIv--RPpFlFG~~t~-----g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~i 213 (346)
T KOG4510|consen 141 AWAFLKEPFTKFEALGSLITLLGVVLIV--RPPFLFGDTTE-----GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYI 213 (346)
T ss_pred HHHHHcCCCcHHHHHHHHHhhheEEEEe--cCCcccCCCcc-----ccccccccccCCchHHHHHhHhhhhhHHHHHHHh
Confidence 4789999999999999999999999986 45555543222 2222222334567888888999988888888988
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhc
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKL-QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKP 160 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~-~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~ 160 (227)
.|+.+. +....+..+++.+..++.....+ .+.. +...+|+.++.+|++ ..+++.+..+++|+-.+..+++..|
T Consensus 214 Gk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~ 287 (346)
T KOG4510|consen 214 GKNAHA-IMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTY 287 (346)
T ss_pred hccccE-EEEehHHHHHHHHHHHHHHhhcc----ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhH
Confidence 777663 66666667777777766654333 2222 124578888999996 5799999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 161 LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 161 ~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
+..++|.++.++++||.|+++.|+|+++++...+.+..+|.
T Consensus 288 ~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 288 TDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred HHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 99999999999999999999999999999987777665554
No 18
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.60 E-value=4.6e-14 Score=113.84 Aligned_cols=170 Identities=12% Similarity=0.088 Sum_probs=135.7
Q ss_pred cchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccch
Q 027169 11 SQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKIN 90 (227)
Q Consensus 11 ~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~ 90 (227)
+.++.+.+.+++.|+.++.- .+++ .......|..+++.+..||+.|.+..||..+..+. -.
T Consensus 118 r~~d~vwvaLAvlGi~lL~p-~~~~-----------------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g-~~ 178 (292)
T COG5006 118 RLRDFVWVALAVLGIWLLLP-LGQS-----------------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHG-TA 178 (292)
T ss_pred chhhHHHHHHHHHHHHhhee-ccCC-----------------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC-ch
Confidence 45677788889999999852 1211 12335689999999999999999999998766664 77
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHH
Q 027169 91 LVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMA 170 (227)
Q Consensus 91 ~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~ 170 (227)
-+...++.++++.+|+.....+. .. + ...-...-+..+++++.+.|.+=..+++|.++..-+.+..++|.++.+.|
T Consensus 179 g~a~gm~vAaviv~Pig~~~ag~--~l-~-~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G 254 (292)
T COG5006 179 GVAVGMLVAALIVLPIGAAQAGP--AL-F-SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSG 254 (292)
T ss_pred HHHHHHHHHHHHHhhhhhhhcch--hh-c-ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHH
Confidence 88888999999999998633221 11 1 12235555778999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 171 VMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 171 ~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
++++||++|+.||+|+.+|+.+..=..+..+|+
T Consensus 255 ~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 255 LIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 999999999999999999998777555544433
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.59 E-value=3.2e-14 Score=118.34 Aligned_cols=142 Identities=12% Similarity=0.120 Sum_probs=98.2
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+++++|||++++++++++++++|++++....+ +.. ++.+.++++|+.|.+..|+.
T Consensus 114 a~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~---------------------~~~----~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 114 GRVFLKERISRFQFIAVIIATLGVISNIVLKG---------------------SLP----WEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC---------------------Cch----HHHHHHHHHHHHHHHHHhhc
Confidence 56889999999999999999999998752100 001 35788999999999999997
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhch
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPL 161 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~ 161 (227)
.++ + +....... +.......+.. ............+...|..++++|++ +.++|.+|++++|+.++++++.+.|+
T Consensus 169 ~~~-~-~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl 243 (256)
T TIGR00688 169 KNT-D-LAGFCLET-LSLMPVAIYYL-LQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYI 243 (256)
T ss_pred CCC-C-cchHHHHH-HHHHHHHHHHH-HHhccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 543 3 22222211 11111111111 11111111111222368888899986 88999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 027169 162 GTAIAVFMAVMF 173 (227)
Q Consensus 162 ~pv~a~l~~~~~ 173 (227)
+|+++++++.+.
T Consensus 244 ~Pv~~~~~~~~~ 255 (256)
T TIGR00688 244 GPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHh
Confidence 999999999764
No 20
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.54 E-value=2.7e-13 Score=115.64 Aligned_cols=192 Identities=17% Similarity=0.257 Sum_probs=145.9
Q ss_pred CccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 027169 1 MEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 1 ~~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
++.+++|+|.++++++++++-.+|+++....+..... ++ .........|+++++++.++.+...+..++
T Consensus 107 ~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~-----~~------~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~ 175 (303)
T PF08449_consen 107 LGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS-----SS------NSSSFSSALGIILLLLSLLLDAFTGVYQEK 175 (303)
T ss_pred HHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc-----cc------ccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999998643211100 00 011122234999999999999999999999
Q ss_pred HHhhcC-ccchHHHHHHHHHHHHHHHHHHH--hcCCCCCccc--cCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhh
Q 027169 81 VLKEYP-DKINLVFFSCFFGTIQCAVVSII--VERNPSAWKL--QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFV 155 (227)
Q Consensus 81 ~~~~~~-~p~~~~~~~~l~g~i~~~~~~~~--~~~~~~~~~~--~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~ 155 (227)
..+++. ++.+..++..+++.+..++.... ..+....... ..+..+..++...+ ...++....++..++.+|...
T Consensus 176 ~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~ 254 (303)
T PF08449_consen 176 LFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTT 254 (303)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhh
Confidence 876643 36788899999988888877766 2221111111 11123444455555 566888888899999999999
Q ss_pred hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccccccc
Q 027169 156 ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKES 204 (227)
Q Consensus 156 s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~ 204 (227)
++...+.-+.+++++++++|+++++.+|+|.++++.|..+..+.|+|++
T Consensus 255 t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 255 TIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred hhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 9999999999999999999999999999999999999999988887653
No 21
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.51 E-value=5.6e-13 Score=109.95 Aligned_cols=171 Identities=9% Similarity=0.107 Sum_probs=131.4
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+++|+|||+++.|+++++++.+|+.......|. - -+..+.-+++|+.|-.+.|+.
T Consensus 116 G~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~---------------------l----pwval~la~sf~~Ygl~RK~~ 170 (293)
T COG2962 116 GRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS---------------------L----PWVALALALSFGLYGLLRKKL 170 (293)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC---------------------C----cHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999998654321 1 234566688999999998876
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhch
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPL 161 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~ 161 (227)
.- + +.+-.+.-++.-.+..+.+.+................+..++..|+ .|.++..+|..+-++.+-+..+.+.|.
T Consensus 171 ~v--~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi 246 (293)
T COG2962 171 KV--D-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYI 246 (293)
T ss_pred CC--c-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 32 2 2444445555444444444444433221011123346777788888 588999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 162 GTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 162 ~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
+|..-.+++++++||+++..+++..++|-.|+.++..+..
T Consensus 247 ~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 247 EPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999886654
No 22
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.47 E-value=1.4e-12 Score=110.86 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=112.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcc-ccCchhHHHHHHHHHH
Q 027169 56 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWK-LQPGIQRTAVIYAAIV 134 (227)
Q Consensus 56 ~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~-~~~~~~~~~li~l~v~ 134 (227)
+...|.+++++++++|+...+..|.. .+.+ |.++.+++++++.+++.++....++ ..... ...+.........+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHHHHHHHHH
Confidence 46789999999999999999999875 6677 7999999999998877766543321 11100 0001122233346666
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 135 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 135 ~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
.....+.++++++++.+++.++++.++.|++.++++++++||+++..+++|.++.++|+.++.+
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 7778999999999999999999999999999999999999999999999999999999998764
No 23
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.40 E-value=7.1e-12 Score=104.23 Aligned_cols=136 Identities=11% Similarity=0.141 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCC---CCccccCchh-HHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNP---SAWKLQPGIQ-RTAVIYAAIVG 135 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~li~l~v~~ 135 (227)
|.+++++++++|+...+..|.. .+.+ |.++.+++++++.+++.++.....+.. +.+....... +..+...|++
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~~-~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 79 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKLL-KPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL- 79 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-ccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence 7899999999999999999984 5677 799999999999888776654432210 0111111122 3344555654
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 136 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 136 s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
..+.+.+++++++++++..++.+.++.|+++++++++++||++++.+++|..+.++|+.++..
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 668899999999999999999999999999999999999999999999999999999987754
No 24
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.35 E-value=3.2e-11 Score=101.73 Aligned_cols=134 Identities=13% Similarity=0.201 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHH
Q 027169 61 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 140 (227)
Q Consensus 61 ~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~ 140 (227)
..+.+.++++||.+.++.|+..++.+ + ..++.+..+++.+.++...... ...+...+ ..+...+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 56789999999999999998766644 3 3466666666666666543211 12233222 234444555555778899
Q ss_pred HHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 141 SIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 141 ~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
.++++++++.+++.++.+.++.|+++.+++++++||++++.+++|..+++.|+++....
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999987653
No 25
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=99.33 E-value=6.7e-11 Score=88.23 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 139 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~ 139 (227)
|.++.+.+.++-+..+++.|+..++.+. ...... . + ...... . .....+++|+++.+++
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~----------~----~p~~~i~lgl~~~~la 61 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF----------G----LALRAVLLGLAGYALS 61 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH----------h----ccHHHHHHHHHHHHHH
Confidence 7889999999999999999999888763 332221 1 0 111010 0 0123578899999999
Q ss_pred HHHHHHHHhccCchhhhhhhchHHHHHHHHHHH--HhCCCCCchhhhhHHHHHHHhhhhhccccc
Q 027169 140 SSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVM--FLGETPHLGSLIGTVVIAFGFYAVIWAQGK 202 (227)
Q Consensus 140 ~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~--~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~ 202 (227)
+.+|.+++++.+.+.+..+....++...+.++. ++||++|+.+++|+++|++|++++.+.++|
T Consensus 62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999999999888888885 899999999999999999999998865554
No 26
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.26 E-value=2.4e-10 Score=99.52 Aligned_cols=140 Identities=11% Similarity=0.120 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHH
Q 027169 59 LGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVI 138 (227)
Q Consensus 59 ~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~ 138 (227)
.-.+.++..-++|+.+.++.|...++.-+|..+.++++.+++++++++++..++... ++......|..+..+|+++ .+
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-~~~~~~~~~~~l~l~g~~g-~~ 90 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRS-LPPLSVSILSKIGLLGFLG-SM 90 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcchHHHHHHHHHHHHHH-HH
Confidence 346778888899999999999988775558999999999999999988866543211 1111223567777788877 56
Q ss_pred HHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHH------hCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 139 RSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMF------LGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 139 ~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~------lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
.+.++++++++++++.++++.++.|++++++++++ ++|+++..+++|.++-++|+.++...+
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~ 158 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH 158 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 77789999999999999999999999999999999 699999999999999999999877544
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.21 E-value=5e-10 Score=85.69 Aligned_cols=138 Identities=14% Similarity=0.231 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh------cCccchHHHHHHHHHHHHHHHHHHHhcCCCCC--cc-cc------Cchh
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKE------YPDKINLVFFSCFFGTIQCAVVSIIVERNPSA--WK-LQ------PGIQ 124 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~------~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~--~~-~~------~~~~ 124 (227)
|.++++.+.++.|+++++.|+..++ ..+|.....+....+.+.+++.+.+.+..... .. .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999987655 23478999999999999999998877653211 10 00 1133
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 125 RTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 125 ~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
+..++..|+ .........++.+++++|...++.+.+-.+...++|++++||++++.+++|.++.++|.++..|
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 455555555 4557788889999999999999999999999999999999999999999999999999987653
No 28
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.21 E-value=3e-12 Score=103.62 Aligned_cols=177 Identities=16% Similarity=0.128 Sum_probs=139.5
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
.++|+|.|-++.|+.|+++++.|++++++.+-. +.....++++..|+.+.+.+|.+||+.++....+
T Consensus 122 sw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~-------------agd~aggsnp~~GD~lvi~GATlYaVSNv~EEfl 188 (336)
T KOG2766|consen 122 SWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH-------------AGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFL 188 (336)
T ss_pred HHHHHHHHHhhheeeeEEeEecceEEEEEeeec-------------cccccCCCCCccCcEEEEecceeeeeccccHHHH
Confidence 578999999999999999999999998732111 1112345678899999999999999999999999
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhch
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPL 161 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~ 161 (227)
.++.+. .+......++|+++..+-..+..+.... ..++++....+- ..++..+-|.+....+|..+++...+-..+
T Consensus 189 vkn~d~-~elm~~lgLfGaIIsaIQ~i~~~~~~~t--l~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLT 264 (336)
T KOG2766|consen 189 VKNADR-VELMGFLGLFGAIISAIQFIFERHHVST--LHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLT 264 (336)
T ss_pred HhcCcH-HHHHHHHHHHHHHHHHHHHhhhccceee--EeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhH
Confidence 999884 8889999999999998874433333222 223323333333 344667778888888999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 162 GTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 162 ~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
.-.|++++ ..||=+.+|...+..+.+..|+++..
T Consensus 265 sDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 265 SDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred HHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 99999999 67888899999999999999999874
No 29
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.20 E-value=7.9e-10 Score=93.79 Aligned_cols=132 Identities=7% Similarity=-0.014 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHH
Q 027169 61 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 140 (227)
Q Consensus 61 ~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~ 140 (227)
....++..+.|+...+..|...++.+ |..++++++.+++++++++....+.. . .+...|......|++.....+
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~---~--~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP---L--PTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC---C--CcHHHHHHHHHHHHHHHHHHH
Confidence 45578889999999999998888877 79999999999999988876543321 1 123457777778887766788
Q ss_pred HHHHHHH-hccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 141 SIIAWCL-QKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 141 ~l~~~~~-~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
.+++++. ++.+++.++++.++.|+++.+++++ +||++++.+++|+++.++|+.+....
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~ 142 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG 142 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence 8889998 8899999999999999999999985 79999999999999999999987643
No 30
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.16 E-value=6.2e-10 Score=92.38 Aligned_cols=120 Identities=12% Similarity=-0.005 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027169 71 SATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKK 150 (227)
Q Consensus 71 ~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~ 150 (227)
|+...+..|...++..+|....+++++.+.+.+.+..... .+...+...+..+.++..+.+.++++++++.
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~ 71 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRL 71 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc---------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5666778888766544478889999998888777654321 1234566777788878889999999999999
Q ss_pred CchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 151 GPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 151 ~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
+++.++++..++|+++.+++.+++||++++.+++|+.+.+.|+.++...
T Consensus 72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD 120 (260)
T ss_pred ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence 9999999999999999999999999999999999999999999987643
No 31
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.16 E-value=1.5e-09 Score=92.39 Aligned_cols=127 Identities=11% Similarity=0.098 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHH
Q 027169 61 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 140 (227)
Q Consensus 61 ~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~ 140 (227)
.++.++++++|+...+..|...++.+ |..+.++++.++++.++++. ... .. .+..++..+++.....+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~---~~~--~~------~~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV---ARP--KV------PLNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh---cCC--CC------chHHHHHHHHHHHHHHH
Confidence 35688999999999999999888887 79999999999876665543 110 10 12233444554455556
Q ss_pred HHHHHHHhc-cCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 141 SIIAWCLQK-KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 141 ~l~~~~~~~-~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
.+++.+.++ .++..++++.++.|+++.+++++++||+++..+++|+++.++|+.+..+.
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~ 133 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED 133 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence 677788887 57789999999999999999999999999999999999999999988753
No 32
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.14 E-value=1.3e-09 Score=92.56 Aligned_cols=131 Identities=12% Similarity=0.081 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHH
Q 027169 59 LGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVI 138 (227)
Q Consensus 59 ~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~ 138 (227)
.+.+++++++++|+.+.+..|...++.| |....++++..++++++++. .. +... ...+..++ .+.+....
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~---~~--~~~~---~~~~~~~~-~~~l~~~~ 73 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV---GF--PRLR---QFPKRYLL-AGGLLFVS 73 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc---cc--cccc---cccHHHHH-HHhHHHHH
Confidence 3577899999999999999999999988 79999999999988887653 11 1111 11122222 33333444
Q ss_pred HHHHHHHHHh----ccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 139 RSSIIAWCLQ----KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 139 ~~~l~~~~~~----~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
.+.+++.+++ ..++.+++++.++.|+++.++++++++|++++.+++|+++.++|++++...
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 4555555554 467788899999999999999999999999999999999999999987754
No 33
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.14 E-value=4.6e-10 Score=81.96 Aligned_cols=107 Identities=15% Similarity=0.261 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHH
Q 027169 94 FSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMF 173 (227)
Q Consensus 94 ~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~ 173 (227)
+++.++.+.+..+.....+..+.+.......+...+..|++....++.+|.+++++.+ ..++.+..+.|++++++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666655332111111112234666777788777789999999999999 488899999999999999999
Q ss_pred hCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 174 LGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 174 lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
+||+++..+++|.+++++|+.++.+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999987764
No 34
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.10 E-value=3.3e-09 Score=87.66 Aligned_cols=182 Identities=17% Similarity=0.224 Sum_probs=121.6
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
.++++|+|++++||+++.+-++|++++-...... ++++++...+......+...|..+.+.++++-+...+..-+.
T Consensus 61 s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~ 136 (244)
T PF04142_consen 61 SVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS----SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKL 136 (244)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHheeecCCccc----cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999974221111 011111111111234557899999999999999999999888
Q ss_pred HhhcCcc-chHHHHHHHHHHHHHHHHHHHhcCCC-CCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhh
Q 027169 82 LKEYPDK-INLVFFSCFFGTIQCAVVSIIVERNP-SAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFK 159 (227)
Q Consensus 82 ~~~~~~p-~~~~~~~~l~g~i~~~~~~~~~~~~~-~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~ 159 (227)
.|+.+.| ..-+....++|.++.++...+.+... .+..+.. .|-...+..++...++=.+....+|+.+.-.=....
T Consensus 137 lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~--G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~ 214 (244)
T PF04142_consen 137 LKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFH--GYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFAT 214 (244)
T ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchh--hcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHH
Confidence 8875433 44445555555555555443322211 1111111 122233444445556666677778999988889999
Q ss_pred chHHHHHHHHHHHHhCCCCCchhhhhHHHH
Q 027169 160 PLGTAIAVFMAVMFLGETPHLGSLIGTVVI 189 (227)
Q Consensus 160 ~~~pv~a~l~~~~~lgE~~~~~~~iG~~li 189 (227)
.+..+.+.+.+++++|.+++....+|+.++
T Consensus 215 a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 215 AVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 999999999999999999999999998753
No 35
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.03 E-value=8.5e-09 Score=87.79 Aligned_cols=121 Identities=18% Similarity=0.209 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 027169 73 TWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGP 152 (227)
Q Consensus 73 ~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~ 152 (227)
.+++++|...++.+.|...+++++..+.+.+.+... .. ...... .+..+|..++..|++. ...+.+.+++++++++
T Consensus 16 ~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~ 91 (302)
T TIGR00817 16 YFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SG-LPKRLK-ISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAV 91 (302)
T ss_pred HHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCC-CCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccH
Confidence 445677888888666899999999998776655421 11 111111 2345788888899974 6788999999999999
Q ss_pred hhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 153 VFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 153 ~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
+..+++..++|++++++++++++|+++..++.|.+++++|+.+..
T Consensus 92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999998754
No 36
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.99 E-value=3.4e-08 Score=85.99 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 027169 70 SSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQK 149 (227)
Q Consensus 70 ~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~ 149 (227)
+-..+++..|...++.|-|+.++.++++++.+.+.++........++.. .....|..++.+|++.. ..+...+.++++
T Consensus 60 ~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~-~~~~~~~~sl~~ 137 (350)
T PTZ00343 60 LNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL-FVHFGAVISMGL 137 (350)
T ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH-HHHHHHHHHHhh
Confidence 3345677788888888757999999999998776554322111111111 12246778888899765 457777899999
Q ss_pred cCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 150 KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 150 ~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
.+++.++++.+++|+++++++++++||++++.+++|++++++|+.+...
T Consensus 138 ~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 138 GAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred ccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999999999998763
No 37
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.95 E-value=1.5e-08 Score=73.79 Aligned_cols=68 Identities=15% Similarity=-0.002 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 131 AAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 131 l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
.++++..+++.+|.+++++.+..++..+.++.++++.++|++++||++++.+++|.+++++|+.++.+
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34466788999999999999999999999999999999999999999999999999999999988754
No 38
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.94 E-value=3.7e-08 Score=79.31 Aligned_cols=184 Identities=13% Similarity=0.155 Sum_probs=131.7
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+-++.|++-+|+|..-++..++|+++... +..-..+ ..+.....|.++.+++-..=++-....-+.
T Consensus 129 GVl~~~KsY~w~kY~cVL~IV~GValFmY-K~~Kv~g-------------~e~~t~g~GElLL~lSL~mDGlTg~~Qdri 194 (337)
T KOG1580|consen 129 GVLFAHKSYHWRKYCCVLMIVVGVALFMY-KENKVGG-------------AEDKTFGFGELLLILSLAMDGLTGSIQDRI 194 (337)
T ss_pred ehhhhcccccHHHHHHHHHHHHHHHHhhc-cccccCC-------------CcccccchHHHHHHHHHHhcccchhHHHHH
Confidence 45678999999999999999999999853 3221111 233456789888888777666666666666
Q ss_pred HhhcC-ccchHHHHHHHHHHHHHHHHHHHhcCCCCCc--cccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q 027169 82 LKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAW--KLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALF 158 (227)
Q Consensus 82 ~~~~~-~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~ 158 (227)
..++. ......++..+.+.+.+..-..+..+.++-. ...-...|+-+..+++ ++.+++.+.+..+..-+|-.-|+.
T Consensus 195 ra~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSiv 273 (337)
T KOG1580|consen 195 RASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIV 273 (337)
T ss_pred HHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEE
Confidence 55542 1244555555555555544333333221110 0001124666777787 788999999999999999999999
Q ss_pred hchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 159 KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 159 ~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
..+--.|+++.++++++.+++.+||+|.+++..++..=....
T Consensus 274 TTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 274 TTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred eehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 999999999999999999999999999999999988754433
No 39
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.91 E-value=1.9e-07 Score=79.44 Aligned_cols=190 Identities=13% Similarity=0.199 Sum_probs=128.1
Q ss_pred cccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 027169 3 KVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVL 82 (227)
Q Consensus 3 ~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~ 82 (227)
.+++|||++++||.++.+-++|+.++-...... .+. .......+...|....+.++++-+...+...+..
T Consensus 137 vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~-~~a---------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiL 206 (345)
T KOG2234|consen 137 VLILRRKLSRLQWMALVLLFAGVALVQLPSLSP-TGA---------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKIL 206 (345)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC-CCc---------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999984211111 000 0023345678999999999999999999999988
Q ss_pred hhcCccchH-HHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhch
Q 027169 83 KEYPDKINL-VFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPL 161 (227)
Q Consensus 83 ~~~~~p~~~-~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~ 161 (227)
|+-..+.-+ +.-..++|.++.+...+........|.-.. ..|-...++.++....+=.+...-+|+.+--.=.....+
T Consensus 207 K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~ 285 (345)
T KOG2234|consen 207 KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSV 285 (345)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHH
Confidence 764323333 333344455544444433322111111100 123344444444555555556666788777766777778
Q ss_pred HHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 162 GTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 162 ~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
..+++.+.++.++|-++|....+|+.+++..+.+....+.+.
T Consensus 286 aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 286 AIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 899999999999999999999999999999999988555443
No 40
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.84 E-value=2.2e-07 Score=77.63 Aligned_cols=143 Identities=13% Similarity=0.132 Sum_probs=107.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHH
Q 027169 57 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGT 136 (227)
Q Consensus 57 ~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s 136 (227)
...+....+..++.|+......|...++..++....+.+.+.+.+...+...... ........ .+......+.+..
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~ 80 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP--RGLRPALR--PWLLLLLLALLGL 80 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc--cccccccc--chHHHHHHHHHHH
Confidence 4567888888889999999999998776332455555577776666333332111 00111111 1445566667678
Q ss_pred HHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHH-HHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 137 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAV-MFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 137 ~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~-~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
...+.+|+.++++.++..++.+.++.|++..++++ ++++|++++.++.|..+.+.|++++.+....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~ 148 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG 148 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence 89999999999999999999999999999999997 66799999999999999999999998776543
No 41
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.81 E-value=3.4e-09 Score=90.07 Aligned_cols=182 Identities=13% Similarity=0.142 Sum_probs=140.7
Q ss_pred CccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 027169 1 MEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 1 ~~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
+++++.+|+.++..++.++....|+.+-... +.+-...|.+.++++.+..+..+++.|+
T Consensus 126 ~~~~~~~~~~s~~~~lsL~piv~GV~ias~~---------------------e~~fn~~G~i~a~~s~~~~al~~I~~~~ 184 (316)
T KOG1441|consen 126 LSVLLLGKTYSSMTYLSLLPIVFGVAIASVT---------------------ELSFNLFGFISAMISNLAFALRNILSKK 184 (316)
T ss_pred HHHHHhCCCCcceEEEEEEEeeeeEEEeeec---------------------cccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999997531 1223578999999999999999999998
Q ss_pred HHh----hcCccchHHHHHHHHHHHHHH-HHHHHhcCCCC-Cccc-cCchhHHHHHHHHHHHHHHHHHHHHHHHhccCch
Q 027169 81 VLK----EYPDKINLVFFSCFFGTIQCA-VVSIIVERNPS-AWKL-QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPV 153 (227)
Q Consensus 81 ~~~----~~~~p~~~~~~~~l~g~i~~~-~~~~~~~~~~~-~~~~-~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~ 153 (227)
..+ +.+ ++....++.-.+.+.++ |.....++... .+.. .+......+++.. ++...-...-++.+.+++|.
T Consensus 185 ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSal 262 (316)
T KOG1441|consen 185 LLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSAL 262 (316)
T ss_pred hhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCch
Confidence 874 244 58888888888888888 77665544221 0011 1111123333334 34455566678889999999
Q ss_pred hhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
.-+..+.+--++.++.|+++|++++++.+..|.++.++|++++.+.|.++++
T Consensus 263 T~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 263 TYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred hhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999988776544
No 42
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.81 E-value=3.3e-08 Score=80.54 Aligned_cols=192 Identities=14% Similarity=0.130 Sum_probs=113.7
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCC------cCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPL------LGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWK 75 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~ 75 (227)
+..+.+||.+..|++++++...|++.....+.+.. .+-...+.+++.+......+...|....+.+.++-+...
T Consensus 22 ~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~~g~~~~l~a~~~~~~~~ 101 (222)
T TIGR00803 22 NLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVGLSAVLSALLSSGFAG 101 (222)
T ss_pred cccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHHHHHHHHHHHHHHHhhhH
Confidence 45677999999999999999999886432211000 000000000000000111245678888888888877788
Q ss_pred HHHHHHHhhcCccchHHHHH-HHHHHHHHHHHHHHhcCC-CCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCch
Q 027169 76 IFQAAVLKEYPDKINLVFFS-CFFGTIQCAVVSIIVERN-PSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPV 153 (227)
Q Consensus 76 vl~k~~~~~~~~p~~~~~~~-~l~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~ 153 (227)
+...+..++.+..+.....+ .+++.+............ ...+... ..+....+.-++....+..+..+.+|+.++.
T Consensus 102 ~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~ 179 (222)
T TIGR00803 102 VYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPTAVWIVGLLNVGGGLCIGGVVRYADNT 179 (222)
T ss_pred HHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCchHHHHHHHHHHhcCceeeehhHHhHHH
Confidence 88777755543211111111 222222111111111111 0111100 0112222233334567777899999999999
Q ss_pred hhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhh
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
..+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus 180 ~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 180 TKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 999999999999999999999999999999999999998765
No 43
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.79 E-value=1e-07 Score=79.12 Aligned_cols=141 Identities=11% Similarity=0.125 Sum_probs=114.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcc-ccCchhHHHHHHHHHHH
Q 027169 57 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWK-LQPGIQRTAVIYAAIVG 135 (227)
Q Consensus 57 ~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~-~~~~~~~~~li~l~v~~ 135 (227)
...|.++.+.+-+.|+.--...|-+ ++.| +.++..++.+.+...+..+....++....+. ......+......++.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l- 81 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL- 81 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence 3569999999999999999988876 6667 6999999999988888777766544322121 1122345555555664
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 136 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 136 s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
...-..+|.|+..+.....+|+-.|..|++.+++|.+++||+++..|++..++..+|+....+..
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999999999999999999999999876544
No 44
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.78 E-value=6.4e-08 Score=80.55 Aligned_cols=189 Identities=15% Similarity=0.181 Sum_probs=140.7
Q ss_pred CccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 027169 1 MEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 1 ~~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
|+.+..|+|.+..+.+-..+--.|+.+..+.+..+. ...+...+...|..++...-++=+.-+....+
T Consensus 126 mg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s------------~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~ 193 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDS------------SSKSGRENSPIGILLLFGYLLFDGFTNATQDS 193 (327)
T ss_pred HHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCC------------ccccCCCCchHhHHHHHHHHHHHhhHHhHHHH
Confidence 356788999999999999999999988753311110 01122345678999998888888887888777
Q ss_pred HHhhcC-ccchHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 81 VLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQ--PGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 81 ~~~~~~-~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
+.+++. ++....++..+++.+..........+..+...+. ....++-++....+ ...++.+.++-+++-|+-.-+.
T Consensus 194 lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~-gavGQ~FI~~TI~~FGslt~t~ 272 (327)
T KOG1581|consen 194 LFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC-GAVGQLFIFYTIERFGSLTFTT 272 (327)
T ss_pred HhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh-hhhhhheehhhHhhcccHHHHH
Confidence 766532 2577888888887777666533222222222211 12346666677774 5689999999999999999999
Q ss_pred hhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccccc
Q 027169 158 FKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGK 202 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~ 202 (227)
++.+-=+++++++.+++|.++++.||+|..+++.|+.+-...|++
T Consensus 273 I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 273 IMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998777666
No 45
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.68 E-value=9.8e-07 Score=74.91 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=101.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHH
Q 027169 55 SNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIV 134 (227)
Q Consensus 55 ~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~ 134 (227)
.+...|..++++++++|+......|...++.+ |..+.++++++++++++++...... .. +...|...+..|++
T Consensus 8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~~-----~~-~~~~~~~~~~~g~~ 80 (293)
T PRK10532 8 LPVWLPILLLLIAMASIQSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWRL-----RF-AKEQRLPLLFYGVS 80 (293)
T ss_pred cccchHHHHHHHHHHHHHhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHhc-----cC-CHHHHHHHHHHHHH
Confidence 33577899999999999999999999988888 7999999999999888766422111 11 22456666667764
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 135 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 135 ~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
....+.++++++++.+++.++.+.++.|+++.+++. |++.. ..+..+.++|+.++..
T Consensus 81 -~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~ 137 (293)
T PRK10532 81 -LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLP 137 (293)
T ss_pred -HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeee
Confidence 567788899999999999999999999999998873 65554 4556667788887653
No 46
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.63 E-value=6.1e-07 Score=76.12 Aligned_cols=132 Identities=10% Similarity=0.063 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 139 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~ 139 (227)
|.++.++++++|+..-+..|+.. ..+ +.+.. ...+|.+++..+..+...+ .. .....+..-+..|+ .-..+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~-~~~~~--~~~~g~l~~~~~~~~~~~~--~~--~~~~~~~~g~l~G~-~w~ig 72 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGP-YSQTL--GTTFGALILSIAIAIFVLP--EF--WALSIFLVGLLSGA-FWALG 72 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCH-HHHHH--HHHHHHHHHHHHHHHHhCC--cc--cccHHHHHHHHHHH-HHHhh
Confidence 57899999999999999999875 444 23333 4666776666655544321 11 11112222223333 25678
Q ss_pred HHHHHHHHhccCchhhhhhhc-hHHHHHHHHHHHHhCCCCCchh----hhhHHHHHHHhhhhhccc
Q 027169 140 SSIIAWCLQKKGPVFVALFKP-LGTAIAVFMAVMFLGETPHLGS----LIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 140 ~~l~~~~~~~~~~~~~s~~~~-~~pv~a~l~~~~~lgE~~~~~~----~iG~~li~~Gv~l~~~~~ 200 (227)
+.+|+.++++.+.+.+-.+.+ ++++++.+++.+++||+.+..+ ++|.+++++|++++...+
T Consensus 73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 899999999999999988888 9999999999999999999999 999999999999975554
No 47
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=8e-07 Score=73.21 Aligned_cols=194 Identities=13% Similarity=0.189 Sum_probs=125.8
Q ss_pred CccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 027169 1 MEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 1 ~~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
+.+++.|+|-+.+|+.++++-.+|+++..+....+... ..+.-++++..++..-+..|+.+..++-+.-|..-+....
T Consensus 108 ~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~ 185 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS--KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQET 185 (330)
T ss_pred HHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh--hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999986543332221 1111112223344455778887777776666666555554
Q ss_pred HHhhcC-ccchHHHHHHHHHHHHHHHHHH-Hh------cCC----CCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 027169 81 VLKEYP-DKINLVFFSCFFGTIQCAVVSI-IV------ERN----PSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ 148 (227)
Q Consensus 81 ~~~~~~-~p~~~~~~~~l~g~i~~~~~~~-~~------~~~----~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~ 148 (227)
.-+++. .+-+..++...+....++...- +. ... .+.....-+..|..++.-.+ .+..+---.+..-.
T Consensus 186 ~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~t 264 (330)
T KOG1583|consen 186 TYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTT 264 (330)
T ss_pred HHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhc
Confidence 433322 2467888888887776665431 10 000 01111111234555444333 34444444444556
Q ss_pred ccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 149 KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 149 ~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
+.++-.+++...+-=.++.+++.+.|..+++++.|+|.+++..|-++..
T Consensus 265 e~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 265 ETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred eecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 6788889999999999999999999999999999999999999988865
No 48
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.52 E-value=2.1e-06 Score=72.27 Aligned_cols=182 Identities=14% Similarity=0.179 Sum_probs=137.4
Q ss_pred CccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 027169 1 MEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 1 ~~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
.|..++|.|++++-+.++..-.+|....... +......|..|++...++-+.+.+..|+
T Consensus 120 ~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~---------------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk 178 (314)
T KOG1444|consen 120 GEVLFFGKRPSNKVWASVFAMIIGSVAAAFT---------------------DLSFNLRGYSWALANCLTTAAFVVYVKK 178 (314)
T ss_pred hHHhhcCcCchhhHHHHHHHHHHHHHhhccc---------------------cceecchhHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999998887521 1122345999999999999999999998
Q ss_pred HHhh--cCccchHHHHHHHHHHHHHHHHHHHhcCCCCCc--cc---cCchhHHHHHHHHHHHHHHHHHHHHHHHhccCch
Q 027169 81 VLKE--YPDKINLVFFSCFFGTIQCAVVSIIVERNPSAW--KL---QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPV 153 (227)
Q Consensus 81 ~~~~--~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~--~~---~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~ 153 (227)
..+. .. .+...++..++..+...+..++.+... .. .. .....+..+..-++++ ..-.+.-.++.+..+++
T Consensus 179 ~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~g-f~isy~s~~ct~~~SAt 255 (314)
T KOG1444|consen 179 SVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMG-FGISYTSFLCTRVNSAT 255 (314)
T ss_pred hhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHH-HHHHHHHHHHHhhcccc
Confidence 7554 33 367888889998888888776665311 11 11 1112355555556644 45556667899999999
Q ss_pred hhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccccccccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNM 206 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~~ 206 (227)
.-++.+...-..+.+...++.|++.++.-.+|..+-++|-.+..+.+.++++.
T Consensus 256 T~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 256 TTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred ceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence 99999988888888889999999999999999999998888888777555444
No 49
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.51 E-value=3.9e-07 Score=72.93 Aligned_cols=187 Identities=13% Similarity=0.173 Sum_probs=134.4
Q ss_pred CccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 027169 1 MEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 1 ~~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
+|-.++|.|.+.....+.++-+.--+.-... |+|+.+.. ......|.+|+...+++-+.|.+..|+
T Consensus 111 gEvl~Fgg~vtsl~l~SFilMvlSS~va~w~-------------D~q~~~~~-~~~lN~GY~Wm~~NclssaafVL~mrk 176 (309)
T COG5070 111 GEVLFFGGRVTSLELLSFILMVLSSVVATWG-------------DQQASAFK-AQILNPGYLWMFTNCLSSAAFVLIMRK 176 (309)
T ss_pred hHHHHhcCccchhhHHHHHHHHHHHHHhccc-------------hhhHHHHH-hcccCCceEEEehhhHhHHHHHHHHHH
Confidence 4778899999999888877766655544211 11111111 123456899999999999999999997
Q ss_pred HHhh--cCccchHHHHHHHHHHHHHHHHHHHhcCC-CCCccc-cCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhh
Q 027169 81 VLKE--YPDKINLVFFSCFFGTIQCAVVSIIVERN-PSAWKL-QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVA 156 (227)
Q Consensus 81 ~~~~--~~~p~~~~~~~~l~g~i~~~~~~~~~~~~-~~~~~~-~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s 156 (227)
..+- .. ..+..+|..+++..++..++++.+.. +..... .+.....++..-|+ +++.-.+.-.|+++-++.+.-|
T Consensus 177 ri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrVtSSTtyS 254 (309)
T COG5070 177 RIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRVTSSTTYS 254 (309)
T ss_pred hhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEeehhhhHHH
Confidence 6442 33 38889999999999999998876542 221111 11123445555666 5666677789999999999999
Q ss_pred hhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 157 LFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 157 ~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
+.+.+.-.-..+-|.+++||+.+...+..+.+-.....+....|.++
T Consensus 255 MvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k 301 (309)
T COG5070 255 MVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKK 301 (309)
T ss_pred HHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888776555555555443
No 50
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.49 E-value=1.1e-06 Score=72.48 Aligned_cols=183 Identities=16% Similarity=0.188 Sum_probs=126.1
Q ss_pred ccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 027169 4 VAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLK 83 (227)
Q Consensus 4 ~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~ 83 (227)
-+++++++.+||+|++.-.+|++++... +....+| +-.+.++.+.|+++.+++-+..|+..++-.|..+
T Consensus 132 ~~Ln~ti~~~qWl~i~fv~lGlviVg~~---d~~~~~~--------p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~ 200 (372)
T KOG3912|consen 132 MFLNRTITGRQWLGILFVSLGLVIVGSL---DVHLVTD--------PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLK 200 (372)
T ss_pred HHHhcccchhhHHHHHHHHhhhheeeee---ecccccC--------CccccccchhhhHHHHHHHHHHHHHHHHHHhhhh
Confidence 4789999999999999999999998422 1111111 1123466789999999999999999999887766
Q ss_pred hcC-ccchHHHHHHHHHHHHHHHHHHHh----cC-CCCC-----ccc-------cCchhHHHHHHHHHHHHHHHHHHHHH
Q 027169 84 EYP-DKINLVFFSCFFGTIQCAVVSIIV----ER-NPSA-----WKL-------QPGIQRTAVIYAAIVGTVIRSSIIAW 145 (227)
Q Consensus 84 ~~~-~p~~~~~~~~l~g~i~~~~~~~~~----~~-~~~~-----~~~-------~~~~~~~~li~l~v~~s~~~~~l~~~ 145 (227)
+.. +|...+.|..++|..++..++... .+ ++.. +.. ....--.++...|...++..|.+--.
T Consensus 201 ~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGl 280 (372)
T KOG3912|consen 201 KSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGL 280 (372)
T ss_pred hccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhh
Confidence 532 389999999999966665544322 11 1110 100 00001123444454444444444334
Q ss_pred HHhc-cCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 146 CLQK-KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 146 ~~~~-~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
++.+ .+++.=+++-.+-..+.=+++..+..|.++..|+.|.++.+.|.++.+
T Consensus 281 sitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 281 SITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 577777888888888888888889999999999999999999999976
No 51
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.48 E-value=1.1e-06 Score=64.50 Aligned_cols=70 Identities=14% Similarity=0.258 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 132 AIVGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 132 ~v~~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
.+....++++++.+++|+.+...+ +...-+.-+.+++++++++||++|+.+++|+.+|++|+...+...+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 444567899999999999998887 5556789999999999999999999999999999999999866553
No 52
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.45 E-value=7.6e-06 Score=70.51 Aligned_cols=141 Identities=13% Similarity=0.108 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKE-YPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVI 138 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~-~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~ 138 (227)
+.++.-.-+++-+.-...+..+.++ .+.|..-+++..+.-.++..+.... ++....+.......|+..+.++++ =..
T Consensus 14 ~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~-r~~~~~~~~~~~~~~w~y~lla~~-Dv~ 91 (334)
T PF06027_consen 14 VLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLY-RRGFKKWLKVLKRPWWKYFLLALL-DVE 91 (334)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhh-ccccccchhhcchhHHHHHHHHHH-HHH
Confidence 3333333344444444444433333 2224555555554433333333222 222222221122345555566774 568
Q ss_pred HHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccccc
Q 027169 139 RSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGK 202 (227)
Q Consensus 139 ~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~ 202 (227)
+.++++.|.++++.+.+.++.....+++++++++++++++++.+++|+.+.++|+.++...+..
T Consensus 92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 9999999999999999999999999999999999999999999999999999999998877643
No 53
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.37 E-value=9e-08 Score=78.40 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=101.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHH
Q 027169 56 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVG 135 (227)
Q Consensus 56 ~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~ 135 (227)
....|.++..++ .++....++.++..+.. |.+..-.++++-.++..+........ ...+...-.+++.=|+.+
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~----v~gp~g~R~~LiLRg~mG 107 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQP----VIGPEGKRKWLILRGFMG 107 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeee----eecCCCcEEEEEeehhhh
Confidence 456788888888 77777788888776553 47776666555444444333221111 111222233344445544
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 136 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 136 s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
+ .+..+++++.++++-+.+..+.+..|+++.+++|.+++|+.+....+|..+.+.|++++.|++--.
T Consensus 108 ~-tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlF 174 (346)
T KOG4510|consen 108 F-TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLF 174 (346)
T ss_pred h-hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCccc
Confidence 3 667788899999999999999999999999999999999999999999999999999998877543
No 54
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.34 E-value=2.6e-05 Score=64.98 Aligned_cols=169 Identities=16% Similarity=0.189 Sum_probs=109.1
Q ss_pred cccccccCcchhhh----hHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 027169 3 KVAIRSRSSQAKIL----GTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQ 78 (227)
Q Consensus 3 ~~~l~e~~~~~~~~----g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~ 78 (227)
.++|+|-.+..+++ ++++-++|+++-...+.. ++ ...+..+...|.+..+.+.+.|..|.++.
T Consensus 91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~---------~~----~~~~~~~~~kgi~~Ll~stigy~~Y~~~~ 157 (269)
T PF06800_consen 91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK---------SD----KSSSKSNMKKGILALLISTIGYWIYSVIP 157 (269)
T ss_pred HhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccc---------cc----ccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 46788877776654 666666677665422111 11 01123456779999999999999999997
Q ss_pred HHHHhhcCccchHHHHHHHHHHHHH-HHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 79 AAVLKEYPDKINLVFFSCFFGTIQC-AVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 79 k~~~~~~~~p~~~~~~~~l~g~i~~-~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
|.. +.+ |.+..+-+.+ |.++. +++..+.++... ....|.- +.-|++ =.++..+|..+.++.+.+..=.
T Consensus 158 ~~~--~~~-~~~~~lPqai-Gm~i~a~i~~~~~~~~~~-----~k~~~~n-il~G~~-w~ignl~~~is~~~~G~a~af~ 226 (269)
T PF06800_consen 158 KAF--HVS-GWSAFLPQAI-GMLIGAFIFNLFSKKPFF-----EKKSWKN-ILTGLI-WGIGNLFYLISAQKNGVATAFT 226 (269)
T ss_pred Hhc--CCC-hhHhHHHHHH-HHHHHHHHHhhccccccc-----ccchHHh-hHHHHH-HHHHHHHHHHhHHhccchhhhh
Confidence 763 334 4666655443 22222 222222211111 1112222 333442 3467778899999999999999
Q ss_pred hhchHHHHHHHHHHHHhCCCCCch----hhhhHHHHHHHhhh
Q 027169 158 FKPLGTAIAVFMAVMFLGETPHLG----SLIGTVVIAFGFYA 195 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~~lgE~~~~~----~~iG~~li~~Gv~l 195 (227)
+..+.++.+.+.|.+++||+=+.. .++|+++++.|..+
T Consensus 227 lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 227 LSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999997765 45788888887664
No 55
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=98.33 E-value=4e-06 Score=60.74 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 132 AIVGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 132 ~v~~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
.+.+..++++++..++++.+...+ +...-+..+.+++++++++||++++.+++|+.+|++|+...+...
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 344567889999999999988877 666778889999999999999999999999999999999986544
No 56
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=98.24 E-value=6.1e-05 Score=56.88 Aligned_cols=131 Identities=14% Similarity=0.094 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHH
Q 027169 61 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 140 (227)
Q Consensus 61 ~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~ 140 (227)
.++++.+..+.++...++.++.++..+|+..+++.+..|.+.+..+..+.++. .....+...|+... -|++ ....-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHHH
Confidence 56788888999999999999988876689999999999999998888776653 22211111133222 3553 44666
Q ss_pred HHHHHHHhccCchhh-hhhhchHHHHHHHHHHH----HhCCCCCchhhhhHHHHHHHhhh
Q 027169 141 SIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVM----FLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 141 ~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~----~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
....+.+++.+++.. .....-+-+.+++++.+ .-++++++.+++|++++++|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 777888899998866 55566788889999986 45678999999999999999864
No 57
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=98.16 E-value=1.5e-05 Score=56.86 Aligned_cols=65 Identities=18% Similarity=0.300 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 135 GTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 135 ~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
+..++|.+...++|+++...+ +...-...+.+++.|+++|||++++.+++|..++++|+...+..
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 456889999999999988877 88889999999999999999999999999999999999987654
No 58
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.14 E-value=3e-06 Score=72.20 Aligned_cols=193 Identities=12% Similarity=0.193 Sum_probs=97.4
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
.+.++|||++++.++|+.+.++|.++++.. ++..... .+-++-.....+..+ ....... ..+...+.....++.
T Consensus 94 a~~~l~e~~~~~~~~G~~l~i~G~~liv~~-~~~~~~~---~t~~~l~~~~~~~~f-l~y~~~~-~~~~~~L~~~~~~r~ 167 (300)
T PF05653_consen 94 ARFFLGEKLTRRDIVGCALIILGSVLIVIF-APKEEPI---HTLDELIALLSQPGF-LVYFILV-LVLILILIFFIKPRY 167 (300)
T ss_pred hHHHhcccchHhHHhhHHHHHhhheeeEEe-CCCCCCc---CCHHHHHHHhcCcce-ehhHHHH-HHHHHHHHHhhcchh
Confidence 578999999999999999999999987633 2211110 000000000000111 1111111 112222222222222
Q ss_pred HhhcCccchHHHHHHHHHHHHHHH---HHHHhcCCC-CCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAV---VSIIVERNP-SAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~---~~~~~~~~~-~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
.++ . .+.......++|+...+. ++....... .+..+.....|..++.+ +.+...-....++++++.+++.+.+
T Consensus 168 g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P 244 (300)
T PF05653_consen 168 GRR-N-ILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVP 244 (300)
T ss_pred ccc-c-eEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEe
Confidence 121 1 232222333344332222 111111111 11112112234333333 3344556667788999999998866
Q ss_pred hhch-HHHHHHHHHHHHhCCC--CCc----hhhhhHHHHHHHhhhhhcccccc
Q 027169 158 FKPL-GTAIAVFMAVMFLGET--PHL----GSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 158 ~~~~-~pv~a~l~~~~~lgE~--~~~----~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
..|. -..++++-|.++++|. .++ ....|+.+++.|+++....|+++
T Consensus 245 ~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~ 297 (300)
T PF05653_consen 245 VYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKE 297 (300)
T ss_pred ehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchh
Confidence 6554 5667777788889985 444 34577888889999987666544
No 59
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.14 E-value=5.9e-05 Score=62.30 Aligned_cols=182 Identities=12% Similarity=0.179 Sum_probs=135.2
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
+.++-++|-......+..+-.+|.++..+-+. ..+++-...|..+.-++-++=|.--.+..+.
T Consensus 150 gifIqGkRY~v~d~~aA~lm~lGli~FTLADs-----------------~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~ 212 (367)
T KOG1582|consen 150 GIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS-----------------QTSPNFNLIGVMMISGALLADAVIGNVQEKA 212 (367)
T ss_pred eeeeccccccHHHHHHHHHHHHHHHhhhhccc-----------------ccCCCcceeeHHHHHHHHHHHHHhhHHHHHH
Confidence 45667888899999999999999999864321 1223445678888777777777665555555
Q ss_pred HhhcC-ccchHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---CchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 82 LKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQ---PGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 82 ~~~~~-~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~---~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
.+..+ +..+..++...+|.+.++.......+-++.|.+. |.......++.+. .+.++.......++.-|+..++.
T Consensus 213 m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aat 291 (367)
T KOG1582|consen 213 MKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAAT 291 (367)
T ss_pred HhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHH
Confidence 55543 2367778888888887776665555545555432 2223344444444 56778888888888899999999
Q ss_pred hhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 158 FKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
....---.++++++++|-.++|....-|+.+++.|+++-.++|+
T Consensus 292 vTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 292 VTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 99999999999999999999999999999999999999888773
No 60
>PRK11431 multidrug efflux system protein; Provisional
Probab=98.10 E-value=2.3e-05 Score=56.24 Aligned_cols=66 Identities=17% Similarity=0.389 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 133 IVGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 133 v~~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
+.+...++++...++|+.+...+ +...-+..+.+.+.|++++||++++.+++|+.++++|+...+.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 34567899999999999998877 8888899999999999999999999999999999999998753
No 61
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=98.07 E-value=2.3e-05 Score=56.55 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 135 GTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 135 ~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
+..+++++...++|+.+...+ +...-...+.+++.+++++||++++.+++|+.+++.|+...+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 456899999999999998877 888889999999999999999999999999999999998864
No 62
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.04 E-value=0.00023 Score=60.71 Aligned_cols=126 Identities=13% Similarity=0.180 Sum_probs=92.0
Q ss_pred HHHHHHHHHhh-cCc--cchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027169 74 WKIFQAAVLKE-YPD--KINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKK 150 (227)
Q Consensus 74 ~~vl~k~~~~~-~~~--p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~ 150 (227)
+.++..+..++ ... |..+++.++.+..+...+......... .. ...+......++ ...++..+-+.++++.
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~-~~~~~~~~~~~al~~i 88 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--SR---KIPLKKYAILSF-LFFLASVLSNAALKYI 88 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--CC---cChHHHHHHHHH-HHHHHHHHHHHHHHhC
Confidence 34444444333 222 578888888888877766654433111 11 112334444555 4567888999999999
Q ss_pred CchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccc
Q 027169 151 GPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 151 ~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
+...-.++-...|+..++++++++|++.+..++++.+++.+|+.+....+.+..+
T Consensus 89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 9999999999999999999999999999999999999999999998876654433
No 63
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.04 E-value=0.00014 Score=61.00 Aligned_cols=171 Identities=13% Similarity=0.161 Sum_probs=120.9
Q ss_pred ccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027169 6 IRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEY 85 (227)
Q Consensus 6 l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~ 85 (227)
-=||+++.-..-+++..+|+++.+.. .. .-...|..+.+.+.++-++-+...+...++.
T Consensus 132 ~lEk~~w~L~l~v~lI~~Glflft~K-sT--------------------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~ 190 (349)
T KOG1443|consen 132 KLEKFRWALVLIVLLIAVGLFLFTYK-ST--------------------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQ 190 (349)
T ss_pred HhHHHHHHHHHHHHHHhhheeEEEec-cc--------------------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcC
Confidence 34788888888888888888887632 11 1246788888888888777777777766654
Q ss_pred C----ccchHHHHHHHHHHHHHHHHHHHhcCCCC-----CccccCc-hhHHHHHHHHHHHHHHHHHHH---HHHHhccCc
Q 027169 86 P----DKINLVFFSCFFGTIQCAVVSIIVERNPS-----AWKLQPG-IQRTAVIYAAIVGTVIRSSII---AWCLQKKGP 152 (227)
Q Consensus 86 ~----~p~~~~~~~~l~g~i~~~~~~~~~~~~~~-----~~~~~~~-~~~~~li~l~v~~s~~~~~l~---~~~~~~~~~ 152 (227)
| .|++..+...-.-.+.+++..+..++... .+..... ..+..+.+++. +...++.+- +..+.+++.
T Consensus 191 ~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ 269 (349)
T KOG1443|consen 191 PSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSS 269 (349)
T ss_pred ccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccc
Confidence 4 36777776666667777777777766422 2222222 23444444444 333444433 345667888
Q ss_pred hhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 153 VFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 153 ~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
-..++..-.--+-..+++..+.+|+++..-|+|..+...|+.+..+
T Consensus 270 ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 270 LTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred eeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 8899999999999999999999999999999999999999999844
No 64
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.03 E-value=5.5e-05 Score=64.48 Aligned_cols=121 Identities=19% Similarity=0.119 Sum_probs=88.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHH
Q 027169 55 SNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIV 134 (227)
Q Consensus 55 ~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~ 134 (227)
.++..|..+++.++++.+....+.|+...+.+. -....-.. ...+ ..+..|+. |+.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~~-----------l~~~~W~~----G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRSY-----------LRRPLWWI----GLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhHH-----------HhhHHHHH----HHH
Confidence 347889999999999999999999998776542 11100000 0000 01112332 333
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 135 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 135 ~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
...++..+-..++...+++.++++..+.-++..+++..++||+++...++|+++++.|..++...
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 34455566677888899999999999999999999999999999999999999999999876543
No 65
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.00 E-value=4.9e-06 Score=68.58 Aligned_cols=187 Identities=13% Similarity=0.086 Sum_probs=126.9
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
..+++|+|-+..-..++++.+.|--+=+ + | ++..+.-...|.++...+.++-|++.+..|+.
T Consensus 146 tyvllkqkTs~~~~~~C~lIi~GF~lGv-------d--------q---E~~~~~ls~~GvifGVlaSl~vAlnaiytkk~ 207 (347)
T KOG1442|consen 146 TYVLLKQKTSFFALGCCLLIILGFGLGV-------D--------Q---EGSTGTLSWIGVIFGVLASLAVALNAIYTKKV 207 (347)
T ss_pred HHhhcccccccccceeehhheehheecc-------c--------c---ccccCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence 3467888877766655554444433321 1 1 11223446789999999999999999999976
Q ss_pred HhhcC-ccchHHHHHHHHHHHHHHHHHHHhcCCCC--Cc-cccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 82 LKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPS--AW-KLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 82 ~~~~~-~p~~~~~~~~l~g~i~~~~~~~~~~~~~~--~~-~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
..... .-..++++..+.+.+.+++...+...-.. .+ +.+..+.|..+..-|+++-.++|. -.+-+|-++|..=.+
T Consensus 208 l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnI 286 (347)
T KOG1442|consen 208 LPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNI 286 (347)
T ss_pred cccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeee
Confidence 44322 23677888899998888887765533211 11 122235677777777765544443 244556667766666
Q ss_pred hhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccccc
Q 027169 158 FKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 207 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~~~ 207 (227)
-..--...=.++++.+.+|+-+..-|-|-.++++|-....+-|++|++.+
T Consensus 287 SgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~ 336 (347)
T KOG1442|consen 287 SGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA 336 (347)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence 66666666778889999999999999999999999999988888776543
No 66
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.94 E-value=0.00041 Score=52.71 Aligned_cols=140 Identities=12% Similarity=0.089 Sum_probs=98.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHH
Q 027169 58 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV 137 (227)
Q Consensus 58 ~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~ 137 (227)
.+..++.+.+..+.....-++.++.+...+|+...++.+..|.+.+..+..+.++.+ .+......-|+..+ -|+++.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~-GG~lGa- 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWI-GGLLGA- 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHH-ccchhh-
Confidence 456788899999999999999999888777899999999999999998888754332 22211111122221 123222
Q ss_pred HHHHHHHHHHhccCch-hhhhhhchHHHHHHHHHHHHhC----CCCCchhhhhHHHHHHHhhhhhccc
Q 027169 138 IRSSIIAWCLQKKGPV-FVALFKPLGTAIAVFMAVMFLG----ETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 138 ~~~~l~~~~~~~~~~~-~~s~~~~~~pv~a~l~~~~~lg----E~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
+--..-....+|.+++ .+.....-+-+.+++++.+=+. .++++..++|++++++|+++..+++
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 2222334455676665 5678888899999999987554 6789999999999999966655443
No 67
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.74 E-value=8.5e-05 Score=58.69 Aligned_cols=179 Identities=15% Similarity=0.179 Sum_probs=123.4
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
.++.+|+|...-|+++.++++.|++++...+.. -.+.+.|+.++.++++.-|+|.++.|+.
T Consensus 97 a~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~ 157 (290)
T KOG4314|consen 97 AIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------------------HADEIIGIACAVGSAFMAALYKVLFKMF 157 (290)
T ss_pred HHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------------------hhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999999998522111 1335889999999999999999999988
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHHH---Hh-cCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVSI---IV-ERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~~---~~-~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
....+ -=+..-....+|..=+...++ +. ....+.|+.....-|..+...+.+ +.....+.+.++....|-..|.
T Consensus 158 iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISi 235 (290)
T KOG4314|consen 158 IGNAN-FGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISI 235 (290)
T ss_pred hccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhhee
Confidence 76643 123333334444332222111 00 011122321111226666666554 3345667788899999999999
Q ss_pred hhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 158 FKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
-.....+--..++.++-+-..+-....|..+|..|..+...+..
T Consensus 236 G~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d 279 (290)
T KOG4314|consen 236 GMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPED 279 (290)
T ss_pred hheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence 99999899999998876667788888999999999998765543
No 68
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.69 E-value=0.00014 Score=51.12 Aligned_cols=57 Identities=25% Similarity=0.392 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHH
Q 027169 133 IVGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVI 189 (227)
Q Consensus 133 v~~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li 189 (227)
+.+.+++++++.+++|+.+...+ +...-+..+...+.|++++||++|+.+++|+.+|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33567899999999999999888 6667799999999999999999999999999876
No 69
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.56 E-value=0.00056 Score=56.63 Aligned_cols=68 Identities=10% Similarity=0.148 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 136 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 136 s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
..+...+.+.++++.+|+.-.++..+..+++.+++++++|.+++..||++..+..+|+.+........
T Consensus 27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 45677888999999999999999999999999999999999999999999999999999987666544
No 70
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.48 E-value=0.0016 Score=54.46 Aligned_cols=107 Identities=16% Similarity=0.192 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhh-chHHHHHHHHHHHH
Q 027169 95 SCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFK-PLGTAIAVFMAVMF 173 (227)
Q Consensus 95 ~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~-~~~pv~a~l~~~~~ 173 (227)
.+.+|++++....++..++ .+.. +...+..-+..|++ =.+++...+.++++.+.+++.+++ -++-+.+.++++++
T Consensus 18 G~t~Gali~alv~~~~~~p--~~~~-~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~ 93 (269)
T PF06800_consen 18 GTTIGALIFALVVFLFRQP--AFSM-SGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLF 93 (269)
T ss_pred HHHHHHHHHHHHHHHHhCC--Ccch-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhh
Confidence 3555666666555544332 2211 11234444555553 458999999999999999999888 56777789999999
Q ss_pred hCCCCCchhh----hhHHHHHHHhhhhhcccccccc
Q 027169 174 LGETPHLGSL----IGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 174 lgE~~~~~~~----iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
|||.-+..++ ++.+++++|+++..++++++++
T Consensus 94 fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~ 129 (269)
T PF06800_consen 94 FGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK 129 (269)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9998776654 3677888999999888776654
No 71
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.41 E-value=0.025 Score=49.06 Aligned_cols=177 Identities=16% Similarity=0.071 Sum_probs=99.9
Q ss_pred chhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH-------HHHHHHHh-
Q 027169 12 QAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWK-------IFQAAVLK- 83 (227)
Q Consensus 12 ~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~-------vl~k~~~~- 83 (227)
..-.+|+++.++|+++...- +. .+|+++++ +...+.+...|.++++++.+.++.|+ ...+...+
T Consensus 135 ~~~~~gv~liliGi~l~s~A-g~----~k~~~~~~---~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~ 206 (345)
T PRK13499 135 RMTLLGVLVALIGVAIVGRA-GQ----LKERKMGI---KKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAAL 206 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hh----hccccccc---ccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhc
Confidence 34677888888999987531 10 01111110 00123567889999999999999999 55443212
Q ss_pred hcCccchHHHHHHH---HHHHHHH-HHHHHh--c-CCCCCccc--cCchhHHHH----HHHHHHHHHHHHHHHHHHHhcc
Q 027169 84 EYPDKINLVFFSCF---FGTIQCA-VVSIIV--E-RNPSAWKL--QPGIQRTAV----IYAAIVGTVIRSSIIAWCLQKK 150 (227)
Q Consensus 84 ~~~~p~~~~~~~~l---~g~i~~~-~~~~~~--~-~~~~~~~~--~~~~~~~~l----i~l~v~~s~~~~~l~~~~~~~~ 150 (227)
+.+ |.....-++. .|+.+.- .++.+. + +....... .+...+..- +..|+ .=.+++.+|.++-++.
T Consensus 207 g~~-~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~ 284 (345)
T PRK13499 207 GVD-PLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKL 284 (345)
T ss_pred CCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHc
Confidence 233 3433333333 4444332 222221 1 22111111 111111222 22233 2345677888888887
Q ss_pred Cchhhhh---hh-chHHHHHHHHHHHHhCCCCC------chhhhhHHHHHHHhhhhhcc
Q 027169 151 GPVFVAL---FK-PLGTAIAVFMAVMFLGETPH------LGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 151 ~~~~~s~---~~-~~~pv~a~l~~~~~lgE~~~------~~~~iG~~li~~Gv~l~~~~ 199 (227)
+...... +. .+..+++.+.|. ++||.=+ ...++|++++++|..++...
T Consensus 285 g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 285 GAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred CCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 6554433 44 777799999998 5999866 45789999999999887654
No 72
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.31 E-value=0.0017 Score=47.05 Aligned_cols=109 Identities=8% Similarity=0.034 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 027169 66 VTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAW 145 (227)
Q Consensus 66 ~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~ 145 (227)
+.++.|+.-+.+.|+..+..+. ..-.. +..-.. ..+. ..|-..+ .+.....+..+|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~-~~~~~-~~~~~~-~~Ll-----------------~n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEK-VKASL-QLLQEI-KFLL-----------------LNPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCC-ccchH-HHHHHH-HHHH-----------------HhHHHHH--HHHHHHHHHHHHHH
Confidence 4568899999999999877653 33221 222111 1111 0122222 33335577888999
Q ss_pred HHhccCchhhhhh-hchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhh
Q 027169 146 CLQKKGPVFVALF-KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAV 196 (227)
Q Consensus 146 ~~~~~~~~~~s~~-~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~ 196 (227)
.+++.+-+.+.+. +.+.=+++++.++++.+|..++..++|.++++.|+.++
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 9999999998888 58999999999988887888889999999999998764
No 73
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.31 E-value=0.0024 Score=55.26 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=92.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHH-----HhcCCC-CCccccCchhHHHHH
Q 027169 56 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSI-----IVERNP-SAWKLQPGIQRTAVI 129 (227)
Q Consensus 56 ~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~-----~~~~~~-~~~~~~~~~~~~~li 129 (227)
+...|.++.+++++||+.+.+-.|+ .++.+ .+.. |- .++++..++.. +..++. ......+...+..-+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~--v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS--VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH--HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 3678999999999999999999998 35543 4433 43 33333333322 111111 112222333455545
Q ss_pred HHHHHHHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCCCC---C----chhhhhHHHHHHHhhhhhcc
Q 027169 130 YAAIVGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETP---H----LGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 130 ~l~v~~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE~~---~----~~~~iG~~li~~Gv~l~~~~ 199 (227)
..|++ =.++...+..++|+.+.++. .+-.-++-+.+.+++.+++||-. + ...++|.+++++|+.++.+.
T Consensus 78 l~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 78 LFGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 55554 35899999999999999977 45556889999999999999754 2 24678899999999999873
No 74
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.28 E-value=0.00052 Score=58.68 Aligned_cols=127 Identities=20% Similarity=0.282 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHh--hcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 027169 71 SATWKIFQAAVLK--EYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ 148 (227)
Q Consensus 71 ~a~~~vl~k~~~~--~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~ 148 (227)
....+++.|+..+ ..+-|...+..+...+.+....... ....+. .+..+...|..++-+|++ ..++..+-+.+++
T Consensus 29 ~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~~~-~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~ 105 (316)
T KOG1441|consen 29 SVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKV-LKLVPP-SKISSKLPLRTLLPLGLV-FCISHVLGNVSLS 105 (316)
T ss_pred heeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCC-CccccccchHHHHHHHHH-HHHHHHhcchhhh
Confidence 3344566777777 5666788888855655555544443 222211 122233568889999995 5699999999999
Q ss_pred ccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 149 KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 149 ~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
+.+....-+.-.++|++.+++++++.+|+.++..+.-...++.|+.+..+.+
T Consensus 106 ~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e 157 (316)
T KOG1441|consen 106 YVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE 157 (316)
T ss_pred ccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc
Confidence 9999999999999999999999999999999988777777777777665543
No 75
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.40 E-value=0.0015 Score=55.38 Aligned_cols=196 Identities=12% Similarity=0.141 Sum_probs=102.6
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV 81 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~ 81 (227)
...++|||++....+|+.++++|-.+++.. .|... +..+-++-..-..+..+ +.....++..++.-.+.+--|+.
T Consensus 108 a~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h-aP~e~---~i~t~~el~~~~~~~~F-liy~~~iil~~~il~~~~~p~~g 182 (335)
T KOG2922|consen 108 ASFFLKEKLNLLGILGCVLCVVGSTTIVIH-APKEQ---EIESVEEVWELATEPGF-LVYVIIIILIVLILIFFYAPRYG 182 (335)
T ss_pred HHHHHHHHHHHhhhhheeEEecccEEEEEe-cCccc---ccccHHHHHHHhcCccH-HHHHHHHHHHHHHHheeeccccc
Confidence 457899999999999999999999998743 22111 00000000000011111 11111111111111111111111
Q ss_pred HhhcCccchHHHHHHHHHHHHHHHHH---HHhcCCCC-CccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhh
Q 027169 82 LKEYPDKINLVFFSCFFGTIQCAVVS---IIVERNPS-AWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVAL 157 (227)
Q Consensus 82 ~~~~~~p~~~~~~~~l~g~i~~~~~~---~~~~~~~~-~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~ 157 (227)
+. .++.+.....+.|++-....- ...+.... ..+......|..++.+.. +...-....++|++..++..++.
T Consensus 183 --~t-nilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~P 258 (335)
T KOG2922|consen 183 --QT-NILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSP 258 (335)
T ss_pred --cc-ceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcch
Confidence 11 245555555555533221110 00111111 111111134555555555 34455666789999999988876
Q ss_pred hhch-HHHHHHHHHHHHhCCCCCc------hhhhhHHHHHHHhhhhhccccccccc
Q 027169 158 FKPL-GTAIAVFMAVMFLGETPHL------GSLIGTVVIAFGFYAVIWAQGKESNM 206 (227)
Q Consensus 158 ~~~~-~pv~a~l~~~~~lgE~~~~------~~~iG~~li~~Gv~l~~~~~~~~~~~ 206 (227)
..|. -..++++-|.++++|--.. ....|...++.|+++..+.|.++.+.
T Consensus 259 iyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~ 314 (335)
T KOG2922|consen 259 IYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISL 314 (335)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccc
Confidence 6654 4677788888999985333 35678899999999987766655443
No 76
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.34 E-value=0.0014 Score=53.62 Aligned_cols=132 Identities=8% Similarity=0.029 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 139 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~ 139 (227)
..+.+++-++.|+..-....+...+ |.+- ...+.+|++.+.+..++...+.. ....+..-+.-|.+ =.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ-~lGtT~GALifaiiv~~~~~p~~-----T~~~~iv~~isG~~-Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGK---PYQQ-TLGTTLGALIFAIIVFLFVSPEL-----TLTIFIVGFISGAF-WSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCC---hhHh-hhhccHHHHHHHHHHheeecCcc-----chhhHHHHHHhhhH-hhhh
Confidence 4678899999999888877665332 2332 23466677777666654422111 11123332333443 2468
Q ss_pred HHHHHHHHhccCchhhhhhhc-hHHHHHHHHHHHHhCCCCCchhh----hhHHHHHHHhhhhhcccc
Q 027169 140 SSIIAWCLQKKGPVFVALFKP-LGTAIAVFMAVMFLGETPHLGSL----IGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 140 ~~l~~~~~~~~~~~~~s~~~~-~~pv~a~l~~~~~lgE~~~~~~~----iG~~li~~Gv~l~~~~~~ 201 (227)
+..-+++++..+.+++.+++. ++-+-+.+++++.|||-.+..++ +..++++.|+++..++++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 888999999999999988765 67788899999999999888765 345667789998877665
No 77
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=96.16 E-value=0.003 Score=50.05 Aligned_cols=66 Identities=12% Similarity=0.154 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 138 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 138 ~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
.+.++|..++++.+|+.++.+....--|..+++++.+|+++....++..++.+.|++...+.++..
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 567889999999999999999999999999999999999999999999999999999988766543
No 78
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.07 E-value=0.0065 Score=52.58 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 136 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 136 s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
=..+.+.++.++.+++.+...++..+.-+|+..++.++.+|++++.+.++..+-++|++++...+.++
T Consensus 169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 35688999999999999999999999999999999999999999999999999999999998776554
No 79
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.61 E-value=0.0018 Score=53.00 Aligned_cols=177 Identities=14% Similarity=0.152 Sum_probs=107.0
Q ss_pred ccccccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 027169 4 VAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLK 83 (227)
Q Consensus 4 ~~l~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~ 83 (227)
+.++|=.+..+ .++++..+++++.. ......+|++|.+ ..+.++...|....+.+.+.|-.|.++.+...-
T Consensus 106 ~~f~EW~t~~~---~IlG~iAliliviG--~~lTs~~~~~nk~----~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v 176 (288)
T COG4975 106 FVFHEWTTPTQ---IILGFIALILIVIG--IYLTSKQDRNNKE----EENPSNLKKGIVILLISTLGYVGYVVLFQLFDV 176 (288)
T ss_pred EEEeccCcchh---HHHHHHHHHHHHHh--heEeeeecccccc----ccChHhhhhheeeeeeeccceeeeEeeeccccc
Confidence 45666655554 34555555555321 1111111221111 123345778999999999999999999887643
Q ss_pred hcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHH
Q 027169 84 EYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGT 163 (227)
Q Consensus 84 ~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~p 163 (227)
+.-+.+.-....|.++++++.... . .....++.+.-+.-|+. =..+...+..+.++.+.+..=.++.+..
T Consensus 177 ~g~saiLPqAiGMv~~ali~~~~~----~-----~~~~~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgV 246 (288)
T COG4975 177 DGLSAILPQAIGMVIGALILGFFK----M-----EKRFNKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGV 246 (288)
T ss_pred cchhhhhHHHHHHHHHHHHHhhcc----c-----ccchHHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhhee
Confidence 321123334444555554443221 1 01112223333333442 3467778888888888888878888889
Q ss_pred HHHHHHHHHHhCCCCCchh----hhhHHHHHHHhhhhhcc
Q 027169 164 AIAVFMAVMFLGETPHLGS----LIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 164 v~a~l~~~~~lgE~~~~~~----~iG~~li~~Gv~l~~~~ 199 (227)
+.+.+-|.+++||+=|..+ ++|++++++|..+....
T Consensus 247 iisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~ 286 (288)
T COG4975 247 IISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIA 286 (288)
T ss_pred eeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhee
Confidence 9999999999999988864 57888888887775443
No 80
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.42 E-value=1.1 Score=38.81 Aligned_cols=141 Identities=11% Similarity=0.069 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCc---cchHHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCchhHHHHHH
Q 027169 59 LGGLLLTVTCFSSATWKIFQAAVLKEYPD---KINLVFFSCFFGTIQCAVVSIIVERN-----PSAWKLQPGIQRTAVIY 130 (227)
Q Consensus 59 ~G~l~~l~aa~~~a~~~vl~k~~~~~~~~---p~~~~~~~~l~g~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 130 (227)
.=.+.++...+-++......|...++... |.+.++..=+.-.+++....+...+. ...........+.-..-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 44566666677777777777766444311 34455554455555555555444211 11110000011111222
Q ss_pred HHHH--HHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 131 AAIV--GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 131 l~v~--~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
+++. ...+-..+++.+.++.+|+.-.....+-.+.+.++..+++++++++.||...++...|+.++...
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 2221 12334458889999999999999999999999999999999999999999999999999998733
No 81
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.33 E-value=0.16 Score=43.80 Aligned_cols=143 Identities=13% Similarity=0.103 Sum_probs=88.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHH-HhcCCCCC-ccccCchhHHHHHHHHH
Q 027169 56 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSI-IVERNPSA-WKLQPGIQRTAVIYAAI 133 (227)
Q Consensus 56 ~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~-~~~~~~~~-~~~~~~~~~~~li~l~v 133 (227)
+...|+++..+++++-+.+.+=.||. |+.+- -.+=..+.+++-++.-.+.. +.-++..+ ....+...+......|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsW-Es~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWSW-ESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCccH-HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 46889999999999999999999987 55541 22222333443333322222 22222111 12223334444444555
Q ss_pred HHHHHHHHHHHHHHhccCchhh-hhhhchHHHHHHHHHHHHhCC-------CCCchhhhhHHHHHHHhhhhhcccc
Q 027169 134 VGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGE-------TPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 134 ~~s~~~~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~~lgE-------~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
+ =.++-..|-.++|+.+.+.. ++..-+.-+++.++--++.|+ +-....++|.++.++|+.++.+.-.
T Consensus 82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 3 35677788889999887743 666666677777776555443 2234678999999999999876543
No 82
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.10 E-value=0.011 Score=50.22 Aligned_cols=127 Identities=16% Similarity=0.122 Sum_probs=90.8
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHH
Q 027169 53 EYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAA 132 (227)
Q Consensus 53 ~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~ 132 (227)
.+.++..|..+++.+.+..+...++.|+..++... ... +.............|+ .|
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~----------------ra~~gg~~yl~~~~Ww----~G 70 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGL----------------RAGEGGYGYLKEPLWW----AG 70 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hcc----------------cccCCCcchhhhHHHH----HH
Confidence 34567889999999999999999999988777431 000 0011111111111233 35
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 133 IVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 133 v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
++...++-..-+-+....+++-+++++.+..++..+++..+++|++++...+|+++.++|=.+.....+++
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 55555555555566666899999999999999999999999999999999999999999888776554444
No 83
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.20 E-value=0.15 Score=42.46 Aligned_cols=132 Identities=10% Similarity=0.047 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 139 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~ 139 (227)
|.+..++|+++++.+.+=.|+.. ..+ ++.+..+++.-..+..+++.. ..+. +. +.+. .+.. -.+ =..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~gD-g~~fQw~~~~~i~~~g~~v~~-~~~~-p~--f~p~-amlg---G~l--W~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TGD-GFFFQWVMCSGIFLVGLVVNL-ILGF-PP--FYPW-AMLG---GAL--WATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CCC-cHHHHHHHHHHHHHHHHHHHH-hcCC-Cc--ceeH-HHhh---hhh--hhcC
Confidence 56778899999999999888764 333 455555544443333333333 2221 11 1111 1111 111 1112
Q ss_pred HHHHHHHHhccCchhh-hhhhchHHHHHHHHHHH-HhCCCCC-----chhhhhHHHHHHHhhhhhcccccc
Q 027169 140 SSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVM-FLGETPH-----LGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 140 ~~l~~~~~~~~~~~~~-s~~~~~~pv~a~l~~~~-~lgE~~~-----~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
..+-.-.+|..|-... .+.+...-+.+-..|-+ +||++.+ +.-++|.+++++|..+....|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 2233334455444433 22333344445444433 5555433 357799999999988877655544
No 84
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=94.12 E-value=0.13 Score=43.22 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 135 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 135 ~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
+-..+..+++.++..+.++.--++.-...+|.-+++..+++.+++..+|+|+..+.+|++.+...+
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d 160 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLD 160 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeee
Confidence 455677788888888999999999999999999999999999999999999999999999987654
No 85
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.10 E-value=1.6 Score=37.28 Aligned_cols=131 Identities=16% Similarity=0.219 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchHHH--HHHHHHHHHHHHHHHHh--cCCCCCccccCchhHHHHHHHHHHHH
Q 027169 61 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVF--FSCFFGTIQCAVVSIIV--ERNPSAWKLQPGIQRTAVIYAAIVGT 136 (227)
Q Consensus 61 ~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~--~~~l~g~i~~~~~~~~~--~~~~~~~~~~~~~~~~~li~l~v~~s 136 (227)
...++.=+++-.+..+..|.....++-|..+.. .|++...+........- +.++.++.....+.-..+++.+-+.+
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 333333444445556667766655554455554 88888777776655321 22222232222112223444444333
Q ss_pred HHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 137 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 137 ~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
. .++.++.+.....++-..+|+...+....++|.+++...+.....+++|.....
T Consensus 94 ~------~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 94 G------SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred c------cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 2 356788999999999999999999999999999999999999999988777654
No 86
>PRK02237 hypothetical protein; Provisional
Probab=93.79 E-value=0.52 Score=33.66 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=41.7
Q ss_pred chhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 152 PVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 152 ~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
..|+ +.+.-...+.++++++.+-|++|+.+-++|.++.++|+.++.+.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3444 677777888899999999999999999999999999998876554
No 87
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=93.68 E-value=1.3 Score=36.75 Aligned_cols=102 Identities=10% Similarity=0.059 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cCchhHHHHHHHHHHHHHH
Q 027169 60 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKL-QPGIQRTAVIYAAIVGTVI 138 (227)
Q Consensus 60 G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~-~~~~~~~~li~l~v~~s~~ 138 (227)
-..+.+.++++.-...-+.|.+....+ |.-.+.++..+++++++.+. + +|.. ....+|..++..|+ +...
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~---R----Pwr~r~~~~~~~~~~~yGv-sLg~ 83 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPLVG-AAGVTALRLAIAALILLALF---R----PWRRRLSKPQRLALLAYGV-SLGG 83 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccccC-hhhHHHHHHHHHHHHHHHHh---h----HHHhccChhhhHHHHHHHH-HHHH
Confidence 578889999999999999999888887 68899999999988887754 2 1221 12346888888888 6778
Q ss_pred HHHHHHHHHhccCchhhhhhhchHHHHHHHHH
Q 027169 139 RSSIIAWCLQKKGPVFVALFKPLGTAIAVFMA 170 (227)
Q Consensus 139 ~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~ 170 (227)
...+++.++++++-..+-.+.++.|+.-.+++
T Consensus 84 MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~ 115 (292)
T COG5006 84 MNLLFYLSIERIPLGIAVAIEFTGPLAVALLS 115 (292)
T ss_pred HHHHHHHHHHhccchhhhhhhhccHHHHHHHh
Confidence 89999999999999999999999998766544
No 88
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=92.87 E-value=0.52 Score=33.59 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=42.0
Q ss_pred Cchhh-hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 151 GPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 151 ~~~~~-s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
...|+ +.+.-...+.++++++.+-|++|+..-++|..+.++|+.++.+.++
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 33343 6666677788999999999999999999999999999998876553
No 89
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=92.67 E-value=0.37 Score=40.98 Aligned_cols=125 Identities=10% Similarity=0.110 Sum_probs=84.6
Q ss_pred HHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCch
Q 027169 76 IFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSA--WKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPV 153 (227)
Q Consensus 76 vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~ 153 (227)
.+.+...++++=|+-.+..+..+=..+....-...+...+. ....+..+.-.+.-.|+ ++.+=-.+-+|++++.+.+
T Consensus 33 f~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlS 111 (349)
T KOG1443|consen 33 FYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLS 111 (349)
T ss_pred HHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeee
Confidence 33444445555567777776665444433333222222111 12222222333334455 6677788999999999999
Q ss_pred hhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
.-++.-...++|..++|.+|-=|+++|.-..=..+|.+|+++..++..
T Consensus 112 lYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 112 LYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred eeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 999999999999999999999999999988888888899998876554
No 90
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=92.20 E-value=0.14 Score=36.30 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCCCchhhhhHHHHHHHhhhhh
Q 027169 167 VFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 167 ~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~ 197 (227)
+.++++++||+++|.+..|.++++.+++.+.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 4567889999999999999999999887654
No 91
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.41 E-value=0.39 Score=33.65 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=28.8
Q ss_pred HHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 167 VFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 167 ~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
+.+++++++|++.|.++.|..+++.|++++.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 46789999999999999999999999988765
No 92
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=88.86 E-value=0.19 Score=36.35 Aligned_cols=28 Identities=18% Similarity=0.290 Sum_probs=26.0
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVS 29 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~ 29 (227)
+.+++||++++.|++|+.+.++|++.+-
T Consensus 75 g~~~f~e~~~~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 75 SWGFFGQRLDLPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999985
No 93
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.68 E-value=0.65 Score=38.98 Aligned_cols=115 Identities=17% Similarity=0.291 Sum_probs=79.3
Q ss_pred cCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccC----chhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhc
Q 027169 85 YPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQP----GIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKP 160 (227)
Q Consensus 85 ~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~----~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~ 160 (227)
.+.|.-++.+++++...++..+.......+....++. ...-.-+.-+.+ .-+.+...-+.++++.+.+.--.-..
T Consensus 58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsv-Vfi~mI~fnnlcL~yVgVaFYyvgRs 136 (347)
T KOG1442|consen 58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSV-VFILMISFNNLCLKYVGVAFYYVGRS 136 (347)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhh-eeeeehhccceehhhcceEEEEeccc
Confidence 3447889999999988888777754433221111111 011111222222 12344556678889999888888889
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 161 LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 161 ~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
++.+|++++++++++++=+.....+|.+|+.|..+-.+.+
T Consensus 137 LttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE 176 (347)
T KOG1442|consen 137 LTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQE 176 (347)
T ss_pred hhhhHHHHhHHhhcccccccccceeehhheehheeccccc
Confidence 9999999999999999999999999999999988765444
No 94
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=88.38 E-value=0.2 Score=36.78 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=25.7
Q ss_pred ccccccccCcchhhhhHHhhhhhhhHHH
Q 027169 2 EKVAIRSRSSQAKILGTVVSIAGAFIVS 29 (227)
Q Consensus 2 ~~~~l~e~~~~~~~~g~~l~~~Gv~li~ 29 (227)
+.+++||++++.|++|+.+.++|++.+-
T Consensus 75 g~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 75 SVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 4578999999999999999999999884
No 95
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=86.88 E-value=0.071 Score=44.14 Aligned_cols=134 Identities=13% Similarity=0.129 Sum_probs=92.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHH
Q 027169 58 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV 137 (227)
Q Consensus 58 ~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~ 137 (227)
.+|.++.+.++-.-....-+.|+. ...|..-++....+=+++..++..+.... . ..-|-.-+.+++ .-+
T Consensus 21 ~LGQiLSL~~t~~a~tss~la~k~---iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~----~~~~~hYilla~-~DV 89 (336)
T KOG2766|consen 21 GLGQILSLLITSTAFTSSELARKG---INAPTSQTFLNYVLLALVYGPIMLFRRKY---I----KAKWRHYILLAF-VDV 89 (336)
T ss_pred eHHHHHHHHHHcchhhhHHHHhcc---CCCccHHHHHHHHHHHHHHhhHHHhhhHH---H----HHHHHHhhheeE-Eee
Confidence 345555555444444444444443 23356666666665555665555433211 1 123444555566 355
Q ss_pred HHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccccc
Q 027169 138 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGK 202 (227)
Q Consensus 138 ~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~ 202 (227)
=+.++...|.++++-+.+.++-.-..+..++++|+|++.+-.++++.|.++.++|+.++...+-+
T Consensus 90 EaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 90 EANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred cccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 67778889999999999999999999999999999999999999999999999999988766543
No 96
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=85.81 E-value=0.51 Score=40.06 Aligned_cols=131 Identities=8% Similarity=0.036 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCC-----------CccccCchhHHHHHHHH
Q 027169 64 LTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPS-----------AWKLQPGIQRTAVIYAA 132 (227)
Q Consensus 64 ~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~l~ 132 (227)
|+++.+||+.+-...|...++... .+.+.|=+.++.+...++..++-+... +....+...+...+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 356789999999999887665432 234566666666655555544422211 11111111222223334
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhh-chHHHHHHHHHHHHhCCCCC--chhhhhHHHHHHHhhhhh
Q 027169 133 IVGTVIRSSIIAWCLQKKGPVFVALFK-PLGTAIAVFMAVMFLGETPH--LGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 133 v~~s~~~~~l~~~~~~~~~~~~~s~~~-~~~pv~a~l~~~~~lgE~~~--~~~~iG~~li~~Gv~l~~ 197 (227)
++ --++..+..+++...|-+.+-.+. .+.-+.++++-|+ ++.+.+ ...+.|.+++++++++-.
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 42 236667777776665544432222 2233345555553 556655 356678888887777643
No 97
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=83.99 E-value=36 Score=31.50 Aligned_cols=41 Identities=7% Similarity=-0.088 Sum_probs=20.2
Q ss_pred hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhh
Q 027169 156 ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAV 196 (227)
Q Consensus 156 s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~ 196 (227)
.......|+-+.+.|.+.-.-.+.....+++++++++..+.
T Consensus 350 ~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 350 MVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 34445567777777765433333333344444444444443
No 98
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=83.81 E-value=2.9 Score=34.43 Aligned_cols=68 Identities=15% Similarity=0.105 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 136 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 136 s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
..++..--+.++|..+=...-+--..-|+=.+++|+++.+.+.+|....-..+|++|+.+.-+.++|.
T Consensus 95 YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 95 YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 34566667888888876666677788899999999999999999999999999999999988876554
No 99
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=82.93 E-value=31 Score=30.02 Aligned_cols=180 Identities=16% Similarity=0.093 Sum_probs=100.5
Q ss_pred ccCcchhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH------
Q 027169 8 SRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAV------ 81 (227)
Q Consensus 8 e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~------ 81 (227)
++-...-.+|+++.++|+.++..- |. .++++.+++ ..+.+...|.+.++++.+.-|.+++-....
T Consensus 131 ~~~g~~vL~Gv~v~LiGIai~g~A-G~----~Ke~~~~~~----~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~ 201 (344)
T PF06379_consen 131 TPSGQIVLLGVAVCLIGIAICGKA-GS----MKEKELGEE----AKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEA 201 (344)
T ss_pred CCCchhhhhHHHHHHHHHHHHhHH-HH----hhhhhhccc----hhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 344556789999999999998521 11 111211111 234567889999999988888777654321
Q ss_pred -HhhcCccchH----HHHHHHHHHHHHHHHHHHhc---CCCC---CccccC---chhHHHHHHHHHHHHHHHHHHHHHHH
Q 027169 82 -LKEYPDKINL----VFFSCFFGTIQCAVVSIIVE---RNPS---AWKLQP---GIQRTAVIYAAIVGTVIRSSIIAWCL 147 (227)
Q Consensus 82 -~~~~~~p~~~----~~~~~l~g~i~~~~~~~~~~---~~~~---~~~~~~---~~~~~~li~l~v~~s~~~~~l~~~~~ 147 (227)
.+.-.+|+.. ....+.-|.+.-+..+++.. ++.. +..... ......-...|+ -=...+.+|-++-
T Consensus 202 a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~ 280 (344)
T PF06379_consen 202 AVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGE 280 (344)
T ss_pred HHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 1111111111 12222334555556665431 2221 111111 122222233333 2345677788887
Q ss_pred hccCch----hhhhhhchHHHHHHHHHHHHhCCC------CCchhhhhHHHHHHHhhhhhc
Q 027169 148 QKKGPV----FVALFKPLGTAIAVFMAVMFLGET------PHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 148 ~~~~~~----~~s~~~~~~pv~a~l~~~~~lgE~------~~~~~~iG~~li~~Gv~l~~~ 198 (227)
.+.++. .-.+.+.+..+++-++|.+ +||- .-...++|+++++.++.++-+
T Consensus 281 s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 281 SKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 777743 4467788888999999964 8872 223457888888888887654
No 100
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.33 E-value=38 Score=29.02 Aligned_cols=110 Identities=11% Similarity=0.013 Sum_probs=77.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHH
Q 027169 88 KINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAV 167 (227)
Q Consensus 88 p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~ 167 (227)
|.-..+-+.+.+.+......-..... .....-|....++++ .+.++-.+-+.++++.+=....+.-..--+-.+
T Consensus 51 ~~fL~~~q~l~~~~~s~~~l~~~k~~-----~~~~apl~~y~~is~-tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 51 SLFLVFCQRLVALLVSYAMLKWWKKE-----LSGVAPLYKYSLISF-TNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred cHHHHHHHHHHHHHHHHHHHhccccc-----CCCCCchhHHhHHHH-HhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 56666777776666653332111111 111122555666677 456888888999999876666666676777778
Q ss_pred HHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccc
Q 027169 168 FMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 203 (227)
Q Consensus 168 l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~ 203 (227)
+++.++.+.+.++...+-+.+|-+|+.+....++..
T Consensus 125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 999999999999999999999999999987765544
No 101
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=77.26 E-value=3.3 Score=31.29 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=21.9
Q ss_pred HhccCchhhhhhhchHHHHHHHHHHHH
Q 027169 147 LQKKGPVFVALFKPLGTAIAVFMAVMF 173 (227)
Q Consensus 147 ~~~~~~~~~s~~~~~~pv~a~l~~~~~ 173 (227)
+...+.-+.+.+.|+.|+++++++.+.
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 355677788999999999998888765
No 102
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=75.58 E-value=2.5 Score=35.57 Aligned_cols=66 Identities=12% Similarity=0.173 Sum_probs=52.0
Q ss_pred HHHHHHHhc-cCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccccccccc
Q 027169 141 SIIAWCLQK-KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNM 206 (227)
Q Consensus 141 ~l~~~~~~~-~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~~ 206 (227)
..-+++++. ++-..=-++..-.++..++.+|+++|.+-+..|+....++-+|++++..-+.+.-+.
T Consensus 79 v~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 79 VTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred eeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 344555554 344444677788999999999999999999999999999999999998776655444
No 103
>PF15102 TMEM154: TMEM154 protein family
Probab=75.55 E-value=3.2 Score=31.41 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=14.4
Q ss_pred hHHHHHHHhhhhhccccccccccCCCCCC
Q 027169 185 GTVVIAFGFYAVIWAQGKESNMTTGNVGS 213 (227)
Q Consensus 185 G~~li~~Gv~l~~~~~~~~~~~~~~~~~~ 213 (227)
+.++++..++++.+.|+|+.|+...+..+
T Consensus 68 LvlLLl~vV~lv~~~kRkr~K~~~ss~gs 96 (146)
T PF15102_consen 68 LVLLLLSVVCLVIYYKRKRTKQEPSSQGS 96 (146)
T ss_pred HHHHHHHHHHheeEEeecccCCCCccccc
Confidence 33444455666665555555544334333
No 104
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=75.38 E-value=14 Score=26.29 Aligned_cols=45 Identities=16% Similarity=0.196 Sum_probs=39.5
Q ss_pred hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhccc
Q 027169 156 ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 156 s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
+.+.-...+.++++.+++=|.+|+.+-++|..+.++|+.++.+.+
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 677778888999999999999999999999999999988776554
No 105
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=73.75 E-value=6 Score=28.27 Aligned_cols=59 Identities=24% Similarity=0.295 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhccCchhhhhh-hchHHHHHHHHHHHHhCCC-CCchhhhhHHHHHHHhhhhh
Q 027169 138 IRSSIIAWCLQKKGPVFVALF-KPLGTAIAVFMAVMFLGET-PHLGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 138 ~~~~l~~~~~~~~~~~~~s~~-~~~~pv~a~l~~~~~lgE~-~~~~~~iG~~li~~Gv~l~~ 197 (227)
-+..+|++-+++.+-+.+..+ +.+.-.|+.+.|.. +||. ..-..+.|..++++|+.++.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccceeehhhhHHhhhhhhee
Confidence 455678888888888876555 45577788888876 5555 56678899999999998764
No 106
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=71.62 E-value=50 Score=26.34 Aligned_cols=35 Identities=6% Similarity=0.102 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCCchhhhhHHHHH--HHhhhhhcccc
Q 027169 167 VFMAVMFLGETPHLGSLIGTVVIA--FGFYAVIWAQG 201 (227)
Q Consensus 167 ~l~~~~~lgE~~~~~~~iG~~li~--~Gv~l~~~~~~ 201 (227)
-.+|..++++-.=+.+..|..+.+ +|.....++++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~~ 169 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRER 169 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 445777778877778888877765 56666655443
No 107
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=71.53 E-value=78 Score=28.58 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHH
Q 027169 58 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV 137 (227)
Q Consensus 58 ~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~ 137 (227)
-.|.++..+.-+.+-+.-++.|+ +.+ |+++....+..+...++.++ +.++ ..+ .+..++ .+. +++
T Consensus 299 KYgiLFI~LTF~~fflfE~~~~~---~iH-piQY~LVGlAl~lFYlLLLS-lSEh----i~F----~~AYli-Aa~-a~i 363 (430)
T PF06123_consen 299 KYGILFIGLTFLAFFLFELLSKL---RIH-PIQYLLVGLALVLFYLLLLS-LSEH----IGF----NLAYLI-AAL-ACI 363 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---ccc-HHHHHHHHHHHHHHHHHHHH-HHhh----hch----HHHHHH-HHH-HHH
Confidence 45777777766666666666554 344 68887777666555555555 3332 111 122222 222 333
Q ss_pred HHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHh
Q 027169 138 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFL 174 (227)
Q Consensus 138 ~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~l 174 (227)
.--.+|..++-+..-.-..+...+.-+.+++.+.+-.
T Consensus 364 ~Li~~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~lLq~ 400 (430)
T PF06123_consen 364 GLISLYLSSVLKSWKRGLIFAGLLAALYGFLYVLLQS 400 (430)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445555555555455556666777788888886533
No 108
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=70.89 E-value=28 Score=31.63 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=30.7
Q ss_pred hhhhhhchHHHHHHHHHHHHhCC-----CCCchhhhhHHHHHHHhhhhhccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGE-----TPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE-----~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
...++..+.-+.=.++-++=-++ .++..|++.+.++++|++++.+.+
T Consensus 225 lf~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 225 LFGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred HHHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHHhh
Confidence 34566666666666665431111 267789999999999988876543
No 109
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=67.04 E-value=55 Score=27.31 Aligned_cols=75 Identities=12% Similarity=-0.014 Sum_probs=44.0
Q ss_pred cchhhhhHHhhhhhhhHHHHhcCCCCcCCCC-------CC-CCCC-CC-----CCCC------CcchhhHHHHHHHHHHH
Q 027169 11 SQAKILGTVVSIAGAFIVSLYKGPPLLGFSS-------PS-NSNI-QL-----PVSE------YSNWALGGLLLTVTCFS 70 (227)
Q Consensus 11 ~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~-------~~-~~~~-~~-----~~~~------~~~~~~G~l~~l~aa~~ 70 (227)
.....+|+++.++|.++....+.......++ .+ .++. .+ ..+. ..+.+.|+++++++.++
T Consensus 115 ~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvl 194 (254)
T PF07857_consen 115 PWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVL 194 (254)
T ss_pred hHHHHHHHHHHHHHHHheeeecCCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHH
Confidence 3457899999999999876544332110000 00 0100 10 1111 11467899999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 027169 71 SATWKIFQAAVLKEY 85 (227)
Q Consensus 71 ~a~~~vl~k~~~~~~ 85 (227)
|+...+=.....+|.
T Consensus 195 yGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 195 YGSNFVPVIYIQDHP 209 (254)
T ss_pred HhcccchHHHHHhCc
Confidence 999888777765553
No 110
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=67.00 E-value=3 Score=31.01 Aligned_cols=26 Identities=12% Similarity=0.123 Sum_probs=20.2
Q ss_pred hccCchhhhhhhchHHHHHHHHHHHH
Q 027169 148 QKKGPVFVALFKPLGTAIAVFMAVMF 173 (227)
Q Consensus 148 ~~~~~~~~s~~~~~~pv~a~l~~~~~ 173 (227)
+.....+++++.|+.|+.+++++.++
T Consensus 63 ~~~~~~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 63 PESSLLKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455678899999999999988764
No 111
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=64.42 E-value=6.3 Score=30.20 Aligned_cols=26 Identities=12% Similarity=0.218 Sum_probs=18.7
Q ss_pred hccCchhhhhhhchHHHHHHHHHHHH
Q 027169 148 QKKGPVFVALFKPLGTAIAVFMAVMF 173 (227)
Q Consensus 148 ~~~~~~~~s~~~~~~pv~a~l~~~~~ 173 (227)
......+.+++.|+.|+++++.+..+
T Consensus 70 ~e~~llkaa~lvYllPLl~li~ga~l 95 (154)
T PRK10862 70 AEGSLLRSALLVYMTPLVGLFLGAAL 95 (154)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455677888889999888877553
No 112
>PRK11715 inner membrane protein; Provisional
Probab=63.88 E-value=1.1e+02 Score=27.60 Aligned_cols=100 Identities=9% Similarity=0.071 Sum_probs=54.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCccccCchhHHHHHHHHHHHHH
Q 027169 58 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV 137 (227)
Q Consensus 58 ~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~l~v~~s~ 137 (227)
-.|.++..+.-+.+-+.-++.|. +.+ |+++....+..+...++.++ +.+|. .+ .+.+++-.+. .+
T Consensus 305 KYgiLFI~LTF~~fFlfE~~~~~---~iH-piQYlLVGlAl~lFYLLLLS-lSEHi----gF----~~AYliAa~a--~v 369 (436)
T PRK11715 305 KYAILFIALTFAAFFLFELLKKL---RIH-PVQYLLVGLALVLFYLLLLS-LSEHI----GF----TLAYLIAALA--CV 369 (436)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCc---eec-HHHHHHHHHHHHHHHHHHHH-HHhhh----ch----HHHHHHHHHH--HH
Confidence 45777777666666666666543 344 68888777776665555555 33331 11 1222222222 22
Q ss_pred HHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHH
Q 027169 138 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVM 172 (227)
Q Consensus 138 ~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~ 172 (227)
+--.+|..++-+-.-.-+.+...+.-+.+++.+.+
T Consensus 370 ~li~~Y~~~vl~~~k~g~~~~~~L~~LYg~Ly~lL 404 (436)
T PRK11715 370 LLIGFYLSAVLRSWKRGLLFAAALAALYGVLYGLL 404 (436)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444455556667777777765
No 113
>PF15471 TMEM171: Transmembrane protein family 171
Probab=60.04 E-value=12 Score=31.21 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=19.0
Q ss_pred hhhhhHHHHHHHhhhhhccccccccc
Q 027169 181 GSLIGTVVIAFGFYAVIWAQGKESNM 206 (227)
Q Consensus 181 ~~~iG~~li~~Gv~l~~~~~~~~~~~ 206 (227)
.|++|-+++++|+....-..-|++++
T Consensus 162 lQImGPlIVl~GLCFFVVAHvKKr~n 187 (319)
T PF15471_consen 162 LQIMGPLIVLVGLCFFVVAHVKKRNN 187 (319)
T ss_pred hhhhhhHHHHHhhhhhheeeeeeccC
Confidence 48999999999998876554444443
No 114
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=58.92 E-value=77 Score=28.63 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=24.3
Q ss_pred hhchHHHHHHHHHHH-HhCCCCCchhhhhHHHHHHHhhhhhccccc
Q 027169 158 FKPLGTAIAVFMAVM-FLGETPHLGSLIGTVVIAFGFYAVIWAQGK 202 (227)
Q Consensus 158 ~~~~~pv~a~l~~~~-~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~ 202 (227)
.....|+.+.++..+ ..... ......|.++++.|+.+..+.+++
T Consensus 394 ~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 394 KALIVGVIACVYSIWLLYAAG-LKYLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555544433 23322 234567888888898776654443
No 115
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=57.05 E-value=17 Score=26.98 Aligned_cols=14 Identities=21% Similarity=0.536 Sum_probs=7.1
Q ss_pred hhhHHHHHHHhhhh
Q 027169 183 LIGTVVIAFGFYAV 196 (227)
Q Consensus 183 ~iG~~li~~Gv~l~ 196 (227)
++|..+.+.|++.+
T Consensus 90 i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 90 IIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHH
Confidence 34555555555543
No 116
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=56.39 E-value=1.3e+02 Score=25.86 Aligned_cols=35 Identities=6% Similarity=-0.146 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 164 AIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 164 v~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
+...+.+++.-.-..+...++++++.++++.+...
T Consensus 353 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 353 ITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555432222344445555555555555443
No 117
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=55.04 E-value=56 Score=25.36 Aligned_cols=49 Identities=6% Similarity=-0.009 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHh-----hcCccchHHHHHHHHHHHHHHH
Q 027169 57 WALGGLLLTVTCFSSATWKIFQAAVLK-----EYPDKINLVFFSCFFGTIQCAV 105 (227)
Q Consensus 57 ~~~G~l~~l~aa~~~a~~~vl~k~~~~-----~~~~p~~~~~~~~l~g~i~~~~ 105 (227)
+.......+.+++.+++..++.....+ |.|.|+.-+.+.++.++++...
T Consensus 130 f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSla 183 (193)
T COG4657 130 FLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLA 183 (193)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHH
Confidence 444556666666666666665543333 3344455555555555544443
No 118
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=52.67 E-value=1.6e+02 Score=25.62 Aligned_cols=9 Identities=11% Similarity=0.475 Sum_probs=4.1
Q ss_pred HHhhhhhcc
Q 027169 191 FGFYAVIWA 199 (227)
Q Consensus 191 ~Gv~l~~~~ 199 (227)
.|..+...+
T Consensus 140 ~~~~l~~~~ 148 (385)
T PF03547_consen 140 LGYFLLESR 148 (385)
T ss_pred HHHHhhccc
Confidence 444444433
No 119
>PRK11010 ampG muropeptide transporter; Validated
Probab=52.37 E-value=1.8e+02 Score=26.31 Aligned_cols=49 Identities=14% Similarity=0.134 Sum_probs=22.4
Q ss_pred hccCchhhhhhhchHHHHHHHH----HHHHhCCCCCc--hhhhhHHHHHHHhhhhhc
Q 027169 148 QKKGPVFVALFKPLGTAIAVFM----AVMFLGETPHL--GSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 148 ~~~~~~~~s~~~~~~pv~a~l~----~~~~lgE~~~~--~~~iG~~li~~Gv~l~~~ 198 (227)
++.+++..+.++....+-..+. |++. |..++ ...+..++.+.|+.+..+
T Consensus 347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~--~~~G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 347 KSFSATQFALLSALSAVGRVYVGPVAGWFV--EAHGWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhChHHHHHHHHHHHHHHHHHHHH
Confidence 3345555565555443333322 3322 22233 344555555666665543
No 120
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=49.31 E-value=62 Score=20.05 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=35.2
Q ss_pred hhhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027169 13 AKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKE 84 (227)
Q Consensus 13 ~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~ 84 (227)
..++|..+-++|++++... | .|.+..+++-..+|.+....|+..+.
T Consensus 4 v~v~G~~lv~~Gii~~~lP-G-------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 4 VGVLGWVLVVAGIIMLPLP-G-------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhhHHHHHHHHHHHhhcCC-C-------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3568889999999997521 1 27778888888899999998887654
No 121
>PRK15049 L-asparagine permease; Provisional
Probab=48.93 E-value=2.1e+02 Score=26.10 Aligned_cols=11 Identities=0% Similarity=-0.088 Sum_probs=4.9
Q ss_pred cchHHHHHHHH
Q 027169 88 KINLVFFSCFF 98 (227)
Q Consensus 88 p~~~~~~~~l~ 98 (227)
|......+.++
T Consensus 352 P~~Ail~~~~i 362 (499)
T PRK15049 352 PYAGILATLVV 362 (499)
T ss_pred CHHHHHHHHHH
Confidence 45444444443
No 122
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=47.84 E-value=2.1e+02 Score=25.74 Aligned_cols=20 Identities=25% Similarity=0.301 Sum_probs=15.0
Q ss_pred hhhhhHHHHHHHhhhhhccc
Q 027169 181 GSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 181 ~~~iG~~li~~Gv~l~~~~~ 200 (227)
...+|+++++.|+.++.+.+
T Consensus 412 ~~~~~~~~~~~g~~~y~~~~ 431 (468)
T TIGR03810 412 YLLLSAILYAPGIYFYARAR 431 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56788888889988876533
No 123
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=47.01 E-value=33 Score=21.01 Aligned_cols=16 Identities=6% Similarity=-0.047 Sum_probs=9.0
Q ss_pred HHHHHhhhhhcccccc
Q 027169 188 VIAFGFYAVIWAQGKE 203 (227)
Q Consensus 188 li~~Gv~l~~~~~~~~ 203 (227)
+++.|+.++.-.|.+.
T Consensus 13 ~~lLg~~I~~~~K~yg 28 (50)
T PF12606_consen 13 MGLLGLSICTTLKAYG 28 (50)
T ss_pred HHHHHHHHHHHhhccc
Confidence 3346777666555543
No 124
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=46.05 E-value=7.6 Score=28.58 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 027169 126 TAVIYAAIVGTVIRSSI 142 (227)
Q Consensus 126 ~~li~l~v~~s~~~~~l 142 (227)
..++..|+..|.++|.+
T Consensus 57 ~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 57 VVILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHHhhHhheeeEee
Confidence 34555677777776665
No 125
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=45.96 E-value=21 Score=19.33 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=9.5
Q ss_pred CCchhhhhHHHHHHHhhh
Q 027169 178 PHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 178 ~~~~~~iG~~li~~Gv~l 195 (227)
-++..++|.+++..+.++
T Consensus 10 ~~~~~~~G~~l~~~~~~~ 27 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLL 27 (34)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 345566777444444443
No 126
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=45.48 E-value=2.2e+02 Score=25.33 Aligned_cols=15 Identities=20% Similarity=0.151 Sum_probs=7.3
Q ss_pred ccccccccccCCCCC
Q 027169 198 WAQGKESNMTTGNVG 212 (227)
Q Consensus 198 ~~~~~~~~~~~~~~~ 212 (227)
+.++|++|...+++.
T Consensus 426 ~~~~~~~~~~~~~~~ 440 (455)
T TIGR00892 426 RLLAKEQKAALEREG 440 (455)
T ss_pred HHHHHHHHHHHhhcc
Confidence 445555555444433
No 127
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=44.83 E-value=45 Score=26.77 Aligned_cols=47 Identities=15% Similarity=0.386 Sum_probs=30.6
Q ss_pred CchhhhhhhchHHHHHHHHHHHHhCCCCC-chhhhhHHHH-HHHhhhhh
Q 027169 151 GPVFVALFKPLGTAIAVFMAVMFLGETPH-LGSLIGTVVI-AFGFYAVI 197 (227)
Q Consensus 151 ~~~~~s~~~~~~pv~a~l~~~~~lgE~~~-~~~~iG~~li-~~Gv~l~~ 197 (227)
.+...+.+..+.|..+..+|-.+-+--.. +.+|+|+.+. ..|+..+.
T Consensus 32 ~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 32 SNLIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 34455666777888888888765543334 4577775554 47887764
No 128
>PF13127 DUF3955: Protein of unknown function (DUF3955)
Probab=44.51 E-value=70 Score=20.52 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027169 57 WALGGLLLTVTCFSSATWKIFQAAVLKE 84 (227)
Q Consensus 57 ~~~G~l~~l~aa~~~a~~~vl~k~~~~~ 84 (227)
...+.++++++.+|+..++....+..++
T Consensus 4 ~~l~~~~~llg~~~l~i~~~~~syVd~~ 31 (63)
T PF13127_consen 4 YILSLILLLLGVVCLFIFNIIGSYVDED 31 (63)
T ss_pred hHHHHHHHHHHHHHHHHHhcccceECCC
Confidence 5677888888888888888887666554
No 129
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=44.36 E-value=1.9e+02 Score=24.13 Aligned_cols=20 Identities=10% Similarity=-0.014 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 027169 67 TCFSSATWKIFQAAVLKEYP 86 (227)
Q Consensus 67 aa~~~a~~~vl~k~~~~~~~ 86 (227)
..+.+.+..+...+..+++.
T Consensus 39 ~~~~~~~~~~~~g~l~dr~g 58 (379)
T TIGR00881 39 FSIAYGISKFVMGSVSDRSN 58 (379)
T ss_pred HHHHHHhhhhhhhHHHHhhC
Confidence 34455555555566666655
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=42.17 E-value=2.3e+02 Score=24.58 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhCCCCC---chhhhhHHHHHHHhhhhhccc
Q 027169 162 GTAIAVFMAVMFLGETPH---LGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 162 ~pv~a~l~~~~~lgE~~~---~~~~iG~~li~~Gv~l~~~~~ 200 (227)
.++-..+.+++. |..+ ...+.|+...+++++.....+
T Consensus 361 ~~~g~~l~G~l~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 361 DAIGAALLGGLG--AMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HhHHHHHHHHHH--HHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 444445555443 3222 233455555555666655443
No 131
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=42.10 E-value=1.5e+02 Score=24.80 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=31.5
Q ss_pred hhhhhhchHHHHHHHHHHHHhCC-----CCCchhhhhHHHHHHHhhhhhccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGE-----TPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE-----~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
..+.+..+..+.=.++..+=-++ .+|..|+++..++++|+.+..+.+
T Consensus 206 ~f~~yl~~Y~~~Rf~iEf~R~~~~~~~~~ls~~Q~~sl~~i~~g~~~~~~~~ 257 (269)
T PRK12437 206 VFALYLIWYSIGRFFIEGLRTDSLMLFGWLRIAQVISIPLIIIGIILIIYRR 257 (269)
T ss_pred hHHHHHHHHHHHHHhhhhhccCchhhhcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 44666666677666666541111 267789999999999988765433
No 132
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=38.41 E-value=20 Score=26.38 Aligned_cols=17 Identities=18% Similarity=0.067 Sum_probs=6.8
Q ss_pred hHHHHHHHhhhhhcccc
Q 027169 185 GTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 185 G~~li~~Gv~l~~~~~~ 201 (227)
|++.+++.++++.++.+
T Consensus 76 GvIg~Illi~y~irR~~ 92 (122)
T PF01102_consen 76 GVIGIILLISYCIRRLR 92 (122)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33334443444444433
No 133
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.83 E-value=1.6e+02 Score=21.22 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=24.5
Q ss_pred CchhhhhhhchHHHHHHHHHHHH---hCCCCCchhhhhHHHH-H-HHhhhhhcccc
Q 027169 151 GPVFVALFKPLGTAIAVFMAVMF---LGETPHLGSLIGTVVI-A-FGFYAVIWAQG 201 (227)
Q Consensus 151 ~~~~~s~~~~~~pv~a~l~~~~~---lgE~~~~~~~iG~~li-~-~Gv~l~~~~~~ 201 (227)
.|-+.+.=.....++++.+||+. +|- +++.+|...++ + +|+..+.|.-.
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~agT--sPwglIv~lllGf~AG~lnv~Rsag 97 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKFAGT--SPWGLIVFLLLGFGAGVLNVLRSAG 97 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444445566777777763 333 33444444444 3 45555544443
No 134
>PRK11469 hypothetical protein; Provisional
Probab=36.28 E-value=38 Score=26.84 Aligned_cols=43 Identities=16% Similarity=0.108 Sum_probs=30.6
Q ss_pred hhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHH-HHhhhhh
Q 027169 155 VALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIA-FGFYAVI 197 (227)
Q Consensus 155 ~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~-~Gv~l~~ 197 (227)
.+.+....|..+...|-.+-+-...+..|+|..+.+ .|...+.
T Consensus 43 ~g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 43 FGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667888888888887655555567888866554 6888765
No 135
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3. This model is specific for the eukaryotic members members of this family.
Probab=36.11 E-value=3.6e+02 Score=25.29 Aligned_cols=43 Identities=12% Similarity=0.293 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHH
Q 027169 58 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTI 101 (227)
Q Consensus 58 ~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i 101 (227)
..=.+|.++++++.-.|.+..|+. ++.|.+.......+++|.+
T Consensus 9 ~~~~~~~l~~~~~~~~~~~~~~~~-~~lP~s~llil~GlllG~i 51 (559)
T TIGR00840 9 YEFILWILLASLAKIGFHLTHKVI-RAVPESVLLIVYGLLVGGI 51 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHHHHH
Confidence 334667777788877777776664 5566555555555665543
No 136
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=35.46 E-value=4.3e+02 Score=25.75 Aligned_cols=45 Identities=13% Similarity=0.200 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHH
Q 027169 62 LLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVS 107 (227)
Q Consensus 62 l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~ 107 (227)
+..++.++..-...++...+.++.+. -......++.+++.++.+.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GR-r~~l~~~~~lsai~~ll~~ 643 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGR-LRMLAGSMVLSCISCFFLS 643 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHH
Confidence 33444445555555666665666653 4344444444554444443
No 137
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=34.92 E-value=26 Score=22.33 Aligned_cols=20 Identities=10% Similarity=0.200 Sum_probs=10.0
Q ss_pred HHHHHHHhhhhhcccccccc
Q 027169 186 TVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 186 ~~li~~Gv~l~~~~~~~~~~ 205 (227)
..+.+.|++...+++.++.+
T Consensus 18 ~~l~fiavi~~ayr~~~K~~ 37 (60)
T COG4736 18 FTLFFIAVIYFAYRPGKKGE 37 (60)
T ss_pred HHHHHHHHHHHHhcccchhh
Confidence 34444555555555554433
No 138
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=34.67 E-value=2e+02 Score=21.57 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHH-HHHhhhhhcccc
Q 027169 123 IQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVI-AFGFYAVIWAQG 201 (227)
Q Consensus 123 ~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li-~~Gv~l~~~~~~ 201 (227)
..+.....+.+.+...=|..-.+..||.++++.+... -..+.+.+.+++. + +|..+- +.|+++..+.++
T Consensus 31 ~~l~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~g---a~iG~IvG~f~~~-p------~G~iiG~~~Ga~l~El~~~ 100 (140)
T PF04306_consen 31 WFLAILAVLALLGEVLDYLAGAYGAKRFGASRWGIWG---AIIGGIVGFFVLP-P------LGLIIGPFLGAFLGELLRG 100 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH---HHHHHHHHHHHhh-H------HHHHHHHHHHHHHHHHHhC
Confidence 3456666677778888999999999999999988874 4456666666544 1 144333 366666655443
Q ss_pred c
Q 027169 202 K 202 (227)
Q Consensus 202 ~ 202 (227)
|
T Consensus 101 ~ 101 (140)
T PF04306_consen 101 K 101 (140)
T ss_pred C
Confidence 3
No 139
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=34.10 E-value=46 Score=24.90 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=26.8
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027169 53 EYSNWALGGLLLTVTCFSSATWKIFQAAVLKEY 85 (227)
Q Consensus 53 ~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~~~ 85 (227)
.-++..+|.++.-.=.+.|++|.+..|.+.++.
T Consensus 100 Glsn~~LgwIL~gVf~lIWslY~~~~~~l~ede 132 (138)
T PF07123_consen 100 GLSNNLLGWILLGVFGLIWSLYFVYTSTLDEDE 132 (138)
T ss_pred cccCchhHHHHHHHHHHHHHHHHhhccccCCCc
Confidence 345578899999999999999999998875543
No 140
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=33.76 E-value=60 Score=23.90 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=14.8
Q ss_pred HHHhCCCCCchh----hhhHHHHHHHhhhhhc
Q 027169 171 VMFLGETPHLGS----LIGTVVIAFGFYAVIW 198 (227)
Q Consensus 171 ~~~lgE~~~~~~----~iG~~li~~Gv~l~~~ 198 (227)
|+|--|-.+++- .+.++++++|+++..+
T Consensus 25 W~fR~ED~tpWNysiL~Ls~vvlvi~~~LLgr 56 (125)
T PF15048_consen 25 WFFRVEDATPWNYSILALSFVVLVISFFLLGR 56 (125)
T ss_pred HheecCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 445556555542 2344455567777553
No 141
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=33.59 E-value=3.2e+02 Score=23.64 Aligned_cols=20 Identities=15% Similarity=0.074 Sum_probs=12.1
Q ss_pred hhhhhHHHHHHHhhhhhccc
Q 027169 181 GSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 181 ~~~iG~~li~~Gv~l~~~~~ 200 (227)
...+++++.+.++.+..+.+
T Consensus 371 ~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 371 FYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 35666666667766664443
No 142
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=32.59 E-value=4.4e+02 Score=25.01 Aligned_cols=25 Identities=24% Similarity=0.317 Sum_probs=20.7
Q ss_pred ccccCcchhhhhHHhhhhhhhHHHH
Q 027169 6 IRSRSSQAKILGTVVSIAGAFIVSL 30 (227)
Q Consensus 6 l~e~~~~~~~~g~~l~~~Gv~li~~ 30 (227)
.||++....++|.++..+|..++++
T Consensus 232 ~~~~l~~lD~IG~~L~~~Gl~LfLl 256 (599)
T PF06609_consen 232 KREQLKELDWIGIFLFIAGLALFLL 256 (599)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3566777789999999999999865
No 143
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=32.28 E-value=2.5e+02 Score=22.09 Aligned_cols=35 Identities=9% Similarity=0.025 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCCchhhhhHHHHH--HHhhhhhcccc
Q 027169 167 VFMAVMFLGETPHLGSLIGTVVIA--FGFYAVIWAQG 201 (227)
Q Consensus 167 ~l~~~~~lgE~~~~~~~iG~~li~--~Gv~l~~~~~~ 201 (227)
-.+|..++.|-.-+....|..+.+ +|.....++++
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa~~~~ 168 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLTHDLI 168 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 455777788877788888877775 56666655544
No 144
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=32.24 E-value=3.6e+02 Score=23.93 Aligned_cols=75 Identities=9% Similarity=0.001 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-CchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 125 RTAVIYAAIVGTVIRSSIIAWCLQKK-GPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 125 ~~~li~l~v~~s~~~~~l~~~~~~~~-~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
...++-++.....+.|.+...+.-|. .+..-.......+..+.++..+.+... ++ ..++..+.+.++.+..+.++
T Consensus 351 ~~~l~~~~~~~~l~~y~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 426 (435)
T PRK10435 351 FGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGA-SS-FELAGTFIVSLIILMFYARK 426 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh-hH-HHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555554443222 222112223355666666666555422 33 34444444444444445433
No 145
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=32.11 E-value=51 Score=24.42 Aligned_cols=28 Identities=21% Similarity=0.647 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 163 TAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 163 pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
.++..+.|.+. ..+|.+.++.+..-...
T Consensus 85 ~~~~~i~g~~~--------~~~G~~~i~l~~~~~~~ 112 (136)
T PF08507_consen 85 SILSIIIGLLL--------FLVGVIYIILGFFCPIK 112 (136)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHcCCC
Confidence 55555555543 36787777777776544
No 146
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=31.78 E-value=28 Score=27.87 Aligned_cols=46 Identities=11% Similarity=0.204 Sum_probs=36.5
Q ss_pred hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 156 ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 156 s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
..+....+++.++.++.+.+++.+..+++..+++..|++...+.+.
T Consensus 8 ~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~ 53 (222)
T TIGR00803 8 IIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDD 53 (222)
T ss_pred HHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHH
Confidence 4455667888888999899999888899999999888887655443
No 147
>TIGR00966 3a0501s07 protein-export membrane protein SecF. This bacterial protein is always found with the homologous protein-export membrane protein SecD. In numerous lineages, this protein occurs as a SecDF fusion protein.
Probab=30.91 E-value=2.1e+02 Score=23.53 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=27.5
Q ss_pred cCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHH
Q 027169 150 KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIA 190 (227)
Q Consensus 150 ~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~ 190 (227)
...+....+.....+...+....++|-+++...+.|.++++
T Consensus 121 ~r~~l~v~~~ip~~l~~~~~~l~~~g~~ln~~sl~gli~~i 161 (246)
T TIGR00966 121 WRFALGAIVALVHDVIITVGVYSLFGIEVNLTTVAALLTII 161 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcccHHHHHHHHHHH
Confidence 34445555555555666666777889999988877766654
No 148
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=30.15 E-value=1.5e+02 Score=22.34 Aligned_cols=29 Identities=7% Similarity=-0.167 Sum_probs=24.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027169 56 NWALGGLLLTVTCFSSATWKIFQAAVLKE 84 (227)
Q Consensus 56 ~~~~G~l~~l~aa~~~a~~~vl~k~~~~~ 84 (227)
+.....+..++++..|--|...+||.++.
T Consensus 118 ~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 118 EAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 35667888999999999999999998654
No 149
>PRK00052 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=29.65 E-value=2.6e+02 Score=23.35 Aligned_cols=47 Identities=17% Similarity=0.271 Sum_probs=32.0
Q ss_pred hhhhhhchHHHHHHHHHHHHhCC-----CCCchhhhhHHHHHHHhhhhhccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGE-----TPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE-----~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
....+.....+.=.++..+=-++ .++..|+++..++++|+.+..+.+
T Consensus 208 ~f~~yl~~Y~~~Rf~iE~~R~~~~~~~~~ls~~Q~isl~~~~~gi~~~~~~~ 259 (269)
T PRK00052 208 VFGLYLIGYGLGRFFIEFFREPDAQLGGGLTMGQILSIPMILLGIILLIWAY 259 (269)
T ss_pred HHHHHHHHHHHHHHhhhhhccCchhhccCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666666666442222 257799999999999998876553
No 150
>PRK11387 S-methylmethionine transporter; Provisional
Probab=29.45 E-value=4.2e+02 Score=23.81 Aligned_cols=20 Identities=20% Similarity=0.155 Sum_probs=12.4
Q ss_pred hhhhHHHHHHHhhhhhcccc
Q 027169 182 SLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 182 ~~iG~~li~~Gv~l~~~~~~ 201 (227)
.++|..+++++.......++
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~ 457 (471)
T PRK11387 438 LWCGIPFVALCYGAYYLTQR 457 (471)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 45677777777766554443
No 151
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=29.43 E-value=24 Score=20.91 Aligned_cols=17 Identities=35% Similarity=0.538 Sum_probs=8.3
Q ss_pred CCchhhhhHHHHHHHhh
Q 027169 178 PHLGSLIGTVVIAFGFY 194 (227)
Q Consensus 178 ~~~~~~iG~~li~~Gv~ 194 (227)
|+|..++=.++|+.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 34555544455554443
No 152
>PF11295 DUF3096: Protein of unknown function (DUF3096); InterPro: IPR021446 This entry is represented by the archaeal Thermoproteus tenax spherical virus 1, Orf18. The characteristics of the protein distribution suggest prophage matches and lateral genetic transfer in addition to the phage matches.
Probab=28.59 E-value=33 Score=19.76 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhh
Q 027169 163 TAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 163 pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
|+.+.+.|.+++=-+=-...++|.-+++.|+.-
T Consensus 1 pi~aliaGiLiLi~PrllnyiVaiyLI~~G~lg 33 (39)
T PF11295_consen 1 PILALIAGILILIMPRLLNYIVAIYLIVIGLLG 33 (39)
T ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666655444444566777777777653
No 153
>CHL00196 psbY photosystem II protein Y; Provisional
Probab=28.37 E-value=85 Score=17.76 Aligned_cols=22 Identities=23% Similarity=-0.028 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 027169 59 LGGLLLTVTCFSSATWKIFQAA 80 (227)
Q Consensus 59 ~G~l~~l~aa~~~a~~~vl~k~ 80 (227)
.=.++-++.+.+|++|++..--
T Consensus 6 liVl~Pil~A~~Wa~fNIg~~A 27 (36)
T CHL00196 6 LVIAAPVLAAASWALFNIGRLA 27 (36)
T ss_pred HHHHHHHHHHHHHHHHHhHHHH
Confidence 3456668899999999987543
No 154
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=27.70 E-value=48 Score=19.26 Aligned_cols=17 Identities=24% Similarity=0.878 Sum_probs=9.0
Q ss_pred hhHHHHHHHhhhhhccc
Q 027169 184 IGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 184 iG~~li~~Gv~l~~~~~ 200 (227)
+|.++++.+++++.+.+
T Consensus 21 V~vI~~vl~~~l~~~~r 37 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYR 37 (40)
T ss_pred hHHHHHHHHHHhheEEe
Confidence 34455556666664443
No 155
>PF15345 TMEM51: Transmembrane protein 51
Probab=27.45 E-value=48 Score=27.14 Aligned_cols=23 Identities=9% Similarity=0.172 Sum_probs=16.3
Q ss_pred hhHHHHHHHhhhhhccccccccc
Q 027169 184 IGTVVIAFGFYAVIWAQGKESNM 206 (227)
Q Consensus 184 iG~~li~~Gv~l~~~~~~~~~~~ 206 (227)
.|+++.++.+++..|.|+|+++.
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq~ 89 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQG 89 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 46666678888888887765543
No 156
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=27.37 E-value=3.5e+02 Score=22.73 Aligned_cols=47 Identities=9% Similarity=0.067 Sum_probs=30.6
Q ss_pred hhhhhhchHHHHHHHHHHHHhCC---------CCCchhhhhHHHHHHHhhhhhccc
Q 027169 154 FVALFKPLGTAIAVFMAVMFLGE---------TPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 154 ~~s~~~~~~pv~a~l~~~~~lgE---------~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
....+..+..+.=.++..+=-++ .+|..|++...++++|+.+..+.+
T Consensus 213 ~~~~yli~Y~~~Rf~iEf~R~~~~~~~~~~~~~lt~~Q~~sl~~i~~g~~~~~~~~ 268 (278)
T TIGR00544 213 IFGVYLIGYGIFRFIIEGLREPDLMLTEFSFLNISMGQILSLLMIAGILIIMLLAY 268 (278)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchhhccccccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33566666666666666431111 267889999999999988765433
No 157
>PRK13022 secF preprotein translocase subunit SecF; Reviewed
Probab=27.27 E-value=2.6e+02 Score=23.62 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=32.6
Q ss_pred cCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhh
Q 027169 150 KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 150 ~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
...+...++.....+...+..+.++|-+++...+.|...+ .|..+
T Consensus 150 ~~~~l~~ilal~~~v~~~lg~~~l~g~~l~~~siaall~l-iG~sV 194 (289)
T PRK13022 150 WRFALGAIIALLHDVIITLGIFSLFQIEFDLTVIAALLTI-IGYSL 194 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcccHHHHHHHHHH-HHHhe
Confidence 4556666667677777777788889999998888776665 45444
No 158
>PRK10655 potE putrescine transporter; Provisional
Probab=26.82 E-value=4.5e+02 Score=23.25 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhc
Q 027169 161 LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 161 ~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~ 198 (227)
..|+.+.+.....+-..+......|..++++|+.+...
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~ 426 (438)
T PRK10655 389 FIAFVGALYSFYALYSSGEEAMLYGSIVTFLGWTLYGL 426 (438)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 34444544443333222222345678888888777643
No 159
>PRK13021 secF preprotein translocase subunit SecF; Reviewed
Probab=26.66 E-value=2.6e+02 Score=23.86 Aligned_cols=44 Identities=20% Similarity=0.148 Sum_probs=29.8
Q ss_pred CchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhh
Q 027169 151 GPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 151 ~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
.-...+++....-+...+..+.++|.+++...++|.+.++ |..+
T Consensus 150 ~~~l~al~al~~dv~~~l~~l~l~g~~l~~~~iaglLtli-G~sv 193 (297)
T PRK13021 150 RLASGALFALVHDVIFVLAFFALTQMEFNLTVLAAVLAIL-GYSL 193 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHH-HHee
Confidence 3344455666666777777778899999988877766554 4433
No 160
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=26.46 E-value=1.4e+02 Score=20.52 Aligned_cols=57 Identities=9% Similarity=0.046 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcc
Q 027169 123 IQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 199 (227)
Q Consensus 123 ~~~~~li~l~v~~s~~~~~l~~~~~~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~ 199 (227)
.-|..-+.+++..-++.....+|-.... .....+-=+|...+|..++++|+.+..+.
T Consensus 30 p~W~~p~m~~lmllGL~WiVvyYi~~~~--------------------i~pi~~lG~WN~~IGfg~~~~Gf~mt~rW 86 (87)
T PF06781_consen 30 PRWYAPLMLGLMLLGLLWIVVYYISGGQ--------------------IPPIPDLGNWNLAIGFGLMIVGFLMTMRW 86 (87)
T ss_pred CccHHHHHHHHHHHHHHHHhhhhcccCC--------------------CCCcccccchHHHHHHHHHHHHHHHHccc
Confidence 3466666666666666666555544432 01111112788899999999999887653
No 161
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=26.41 E-value=4.6e+02 Score=23.22 Aligned_cols=85 Identities=12% Similarity=0.180 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHH--HHHhhcCccchHHHHHHHHHHHHHHHHH-HHhcCCCCCccccCchhHHHHHHHHHHHHHHH
Q 027169 63 LLTVTCFSSATWKIFQA--AVLKEYPDKINLVFFSCFFGTIQCAVVS-IIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 139 (227)
Q Consensus 63 ~~l~aa~~~a~~~vl~k--~~~~~~~~p~~~~~~~~l~g~i~~~~~~-~~~~~~~~~~~~~~~~~~~~li~l~v~~s~~~ 139 (227)
..++..+.++...+... .+..+...|+-..........+=...+. ....++ .......+ ..++.+ +.++...++
T Consensus 44 ~~~~~~i~~~~~~~v~hAe~lA~~~GeP~GtliLtlsv~~iEv~li~~~Ml~g~-~~~tlaRD-tvfa~v-Mi~~nGilG 120 (366)
T PRK10599 44 LLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGD-AAPTLMRD-TLYSII-MIVTGGLVG 120 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CCchHHHH-HHHHHH-HHHhccHHH
Confidence 33444466666655543 3344445565544443333333322222 222222 22222222 233322 233355566
Q ss_pred HHHHHHHHhcc
Q 027169 140 SSIIAWCLQKK 150 (227)
Q Consensus 140 ~~l~~~~~~~~ 150 (227)
..+..=++|+.
T Consensus 121 l~ll~GGlr~~ 131 (366)
T PRK10599 121 FSLLLGGRKFA 131 (366)
T ss_pred HHHHHhccccC
Confidence 66776666663
No 162
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=26.16 E-value=4.3e+02 Score=23.46 Aligned_cols=41 Identities=22% Similarity=0.248 Sum_probs=22.3
Q ss_pred chHHHHHHHHHHHH-----hCCCCCchhhhhHHHHHHHhhhhhcccc
Q 027169 160 PLGTAIAVFMAVMF-----LGETPHLGSLIGTVVIAFGFYAVIWAQG 201 (227)
Q Consensus 160 ~~~pv~a~l~~~~~-----lgE~~~~~~~iG~~li~~Gv~l~~~~~~ 201 (227)
...|+.+.+.+.++ ..++.. ..+.+..+++.|+.+....++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~y~~~~~ 436 (445)
T PRK11357 391 GLMTTLAIASSLILVASTFVWAPIP-GLICAVIVIATGLPAYAFWAK 436 (445)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCcHH-HHHHHHHHHHHhhhHHhheec
Confidence 45566666666554 233222 113567777788776654443
No 163
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=25.93 E-value=4.7e+02 Score=23.22 Aligned_cols=68 Identities=10% Similarity=-0.137 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH---hccCchhhhhhhchHHHHHHHHHHHHhCCCCCc-hhhhhHHHHHHHhhhh
Q 027169 128 VIYAAIVGTVIRSSIIAWCL---QKKGPVFVALFKPLGTAIAVFMAVMFLGETPHL-GSLIGTVVIAFGFYAV 196 (227)
Q Consensus 128 li~l~v~~s~~~~~l~~~~~---~~~~~~~~s~~~~~~pv~a~l~~~~~lgE~~~~-~~~iG~~li~~Gv~l~ 196 (227)
+.-++.+...+.|.+-..+. ++.++..-.......|+.+++...++.-. .++ ....+...++.|..+.
T Consensus 353 l~~~~~~~~li~y~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~y 424 (445)
T PRK10644 353 VSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTLIAFVYCIWAVVG-SGAKEVMWSFVTLMVITAFY 424 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccchhHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Confidence 34444444445544444332 23333222234456677777766554321 222 2334444444555444
No 164
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=25.76 E-value=4.8e+02 Score=23.29 Aligned_cols=42 Identities=7% Similarity=0.101 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhhhcccccccc
Q 027169 164 AIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 164 v~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
.=+.+-+.++-+-.+...-++|+++.+.++.+.....+++++
T Consensus 350 ~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 350 LGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 334444444444445566889999999999888766554443
No 165
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=25.46 E-value=94 Score=20.25 Aligned_cols=23 Identities=22% Similarity=0.202 Sum_probs=13.3
Q ss_pred hhhhHHHHHHHhhhhh-ccccccc
Q 027169 182 SLIGTVVIAFGFYAVI-WAQGKES 204 (227)
Q Consensus 182 ~~iG~~li~~Gv~l~~-~~~~~~~ 204 (227)
.+++++++++|+.+.. +.+++..
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~~~ 29 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKKTT 29 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc
Confidence 4567677777766654 4444443
No 166
>PRK09579 multidrug efflux protein; Reviewed
Probab=25.02 E-value=2.9e+02 Score=28.00 Aligned_cols=31 Identities=10% Similarity=0.221 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhCCCCCchhhhhHHHHHHHhhh
Q 027169 164 AIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 195 (227)
Q Consensus 164 v~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l 195 (227)
+.+++++.++.|.+++....+|+ ++++|+.+
T Consensus 882 ~~G~~~~L~i~~~~l~~~s~~G~-i~L~GivV 912 (1017)
T PRK09579 882 ICGALIPLFLGVSSMNIYTQVGL-VTLIGLIS 912 (1017)
T ss_pred HHHHHHHHHHhCCCccHHHHHHH-HHHHHHHH
Confidence 35677788889999999999884 45566665
No 167
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=24.93 E-value=4.4e+02 Score=22.49 Aligned_cols=17 Identities=0% Similarity=-0.212 Sum_probs=8.1
Q ss_pred hhhchHHHHHHHHHHHH
Q 027169 157 LFKPLGTAIAVFMAVMF 173 (227)
Q Consensus 157 ~~~~~~pv~a~l~~~~~ 173 (227)
.....+++-..+.+++.
T Consensus 331 ~~~~~~~~g~~~~~~l~ 347 (392)
T PRK10473 331 TLGIAQVCGSSLWIWLA 347 (392)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444455555555543
No 168
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.68 E-value=1.9e+02 Score=18.29 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=12.6
Q ss_pred hhhhHHhhhhhhhHHH
Q 027169 14 KILGTVVSIAGAFIVS 29 (227)
Q Consensus 14 ~~~g~~l~~~Gv~li~ 29 (227)
|++|+++-+.|++++.
T Consensus 1 kiigi~Llv~GivLl~ 16 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLY 16 (59)
T ss_pred CeeeehHHHHHHHHHH
Confidence 5678888888888875
No 169
>PRK09577 multidrug efflux protein; Reviewed
Probab=24.36 E-value=2.9e+02 Score=27.99 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCCCCchhhhhHHHHHHHhhhh
Q 027169 163 TAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAV 196 (227)
Q Consensus 163 pv~a~l~~~~~lgE~~~~~~~iG~~li~~Gv~l~ 196 (227)
-+.+.+++.+++|.+++...++|.+ +++|+++-
T Consensus 902 ~l~G~~~~l~l~g~~l~~~s~~G~i-~L~GivVn 934 (1032)
T PRK09577 902 GVIGAVLGVTLRGMPNDIYFKVGLI-ATIGLSAK 934 (1032)
T ss_pred HHHHHHHHHHHhCCCccHHHHHHHH-HHHHHHHc
Confidence 3456788889999999999999988 66777663
No 170
>PF10177 DUF2371: Uncharacterised conserved protein (DUF2371); InterPro: IPR018787 This family of proteins with no known function is conserved from nematodes to humans. It includes members of the TMEM200 family of transmembrane proteins.
Probab=23.11 E-value=1.3e+02 Score=22.67 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=11.5
Q ss_pred hhhhHHHHHHHhhhhh
Q 027169 182 SLIGTVVIAFGFYAVI 197 (227)
Q Consensus 182 ~~iG~~li~~Gv~l~~ 197 (227)
..+|++++++|+.+..
T Consensus 43 l~lG~lvllvGiaMAv 58 (141)
T PF10177_consen 43 LLLGILVLLVGIAMAV 58 (141)
T ss_pred HHHHHHHHHHhhHhhe
Confidence 4678888888887654
No 171
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=23.01 E-value=1.7e+02 Score=19.16 Aligned_cols=8 Identities=25% Similarity=0.559 Sum_probs=3.1
Q ss_pred hhhHHHHH
Q 027169 183 LIGTVVIA 190 (227)
Q Consensus 183 ~iG~~li~ 190 (227)
++|..+++
T Consensus 9 i~Gm~iVF 16 (79)
T PF04277_consen 9 IIGMGIVF 16 (79)
T ss_pred HHHHHHHH
Confidence 33444333
No 172
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=22.71 E-value=60 Score=22.18 Aligned_cols=24 Identities=13% Similarity=0.074 Sum_probs=19.2
Q ss_pred CCCchhhhhHHHHHHHhhhhhccc
Q 027169 177 TPHLGSLIGTVVIAFGFYAVIWAQ 200 (227)
Q Consensus 177 ~~~~~~~iG~~li~~Gv~l~~~~~ 200 (227)
..++..++|++++++|+.+...++
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~ 27 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRF 27 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999888876433
No 173
>TIGR02611 conserved hypothetical protein TIGR02611. Members of this family are Actinobacterial putative proteins of about 150 amino acids in length with three apparent transmembrane helix and an unusual motif with consensus sequence PGPGW.
Probab=22.47 E-value=2.9e+02 Score=20.28 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=31.1
Q ss_pred hhhhHHhhhhhhhHHHHhcCCCCcCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 027169 14 KILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLK 83 (227)
Q Consensus 14 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~vl~k~~~~ 83 (227)
..+|..+-.+|++++.. . -.|.+..+++-..+|......|+..+
T Consensus 29 ~v~G~~~~~~Gi~ml~l-P-------------------------GpG~l~i~iGl~iLatEf~WA~r~L~ 72 (121)
T TIGR02611 29 LVVGWVVLIVGIITIPL-P-------------------------GPGWLTIFIGLAILSLEFVWAQRLLR 72 (121)
T ss_pred HHHHHHHHHHHHHHhcc-C-------------------------CchHHHHHHHHHHHHHhhHHHHHHHH
Confidence 35667777777777742 1 23677788888899999888887654
No 174
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=22.15 E-value=4.6e+02 Score=24.56 Aligned_cols=18 Identities=17% Similarity=0.503 Sum_probs=12.5
Q ss_pred chhhhhHHhhhhhhhHHH
Q 027169 12 QAKILGTVVSIAGAFIVS 29 (227)
Q Consensus 12 ~~~~~g~~l~~~Gv~li~ 29 (227)
..+++|+++|.+-.++++
T Consensus 50 ~~R~~GT~iGa~~~~~lv 67 (650)
T PF04632_consen 50 LYRLIGTLIGAAAGLLLV 67 (650)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457888888876666654
No 175
>PF09945 DUF2177: Predicted membrane protein (DUF2177); InterPro: IPR018687 This family of putative membrane proteins has no known function.
Probab=21.40 E-value=3.5e+02 Score=20.05 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHH
Q 027169 62 LLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVS 107 (227)
Q Consensus 62 l~~l~aa~~~a~~~vl~k~~~~~~~~p~~~~~~~~l~g~i~~~~~~ 107 (227)
--++++.++|+.|..=+.-..|+.| ...+..=...|++.....+
T Consensus 79 ~GallGl~~YgtYdlTN~Atlk~W~--~~~~liD~~WG~~lt~~sa 122 (128)
T PF09945_consen 79 YGALLGLFAYGTYDLTNLATLKDWP--LKVTLIDIAWGTFLTALSA 122 (128)
T ss_pred HHHHHHHHHHHHHHHHhHHHHCCCC--ccHHHHHHhHHHHHHHHHH
Confidence 3346677899999988888888876 4555554555555544433
No 176
>PRK02251 putative septation inhibitor protein; Reviewed
Probab=21.35 E-value=2.9e+02 Score=19.05 Aligned_cols=20 Identities=25% Similarity=0.204 Sum_probs=14.7
Q ss_pred CchhhhhHHHHHHHhhhhhc
Q 027169 179 HLGSLIGTVVIAFGFYAVIW 198 (227)
Q Consensus 179 ~~~~~iG~~li~~Gv~l~~~ 198 (227)
.|...+|..++++|+.+..+
T Consensus 66 ~WN~~IGfg~~~~G~~mt~r 85 (87)
T PRK02251 66 AWNLVIGFGLIMAGFGMTTQ 85 (87)
T ss_pred chhHHHHHHHHHHHHHHHcc
Confidence 36777888888888877654
No 177
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=21.16 E-value=60 Score=22.17 Aligned_cols=18 Identities=17% Similarity=0.453 Sum_probs=11.7
Q ss_pred chhhhhHHHHHHHhhhhh
Q 027169 180 LGSLIGTVVIAFGFYAVI 197 (227)
Q Consensus 180 ~~~~iG~~li~~Gv~l~~ 197 (227)
...++|..+.+.|.++..
T Consensus 4 ~~Fl~~l~lliig~~~~v 21 (92)
T PF13038_consen 4 ILFLVGLILLIIGGFLFV 21 (92)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345677777777666654
No 178
>COG2034 Predicted membrane protein [Function unknown]
Probab=20.98 E-value=1.1e+02 Score=21.00 Aligned_cols=25 Identities=24% Similarity=0.259 Sum_probs=19.2
Q ss_pred hhhhhHHHHHHHhhhhhcccccccc
Q 027169 181 GSLIGTVVIAFGFYAVIWAQGKESN 205 (227)
Q Consensus 181 ~~~iG~~li~~Gv~l~~~~~~~~~~ 205 (227)
..++|..++..|+.+..+.+.+++.
T Consensus 14 li~iGf~LifLGi~l~~~~~~~~~~ 38 (85)
T COG2034 14 LIFIGFLLIFLGIVLPAFSPFAESG 38 (85)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccC
Confidence 4678999999999998877665544
No 179
>PRK09528 lacY galactoside permease; Reviewed
Probab=20.91 E-value=5.5e+02 Score=22.21 Aligned_cols=6 Identities=0% Similarity=0.135 Sum_probs=2.3
Q ss_pred HHHHHH
Q 027169 167 VFMAVM 172 (227)
Q Consensus 167 ~l~~~~ 172 (227)
.+.|++
T Consensus 370 ~~~G~l 375 (420)
T PRK09528 370 TLAGNL 375 (420)
T ss_pred HHHHHH
Confidence 333433
No 180
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=20.86 E-value=4.4e+02 Score=21.07 Aligned_cols=47 Identities=13% Similarity=0.137 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC--chhhhhhhchHHHHHHHHHH
Q 027169 125 RTAVIYAAIVGTVIRSSIIAWCLQKKG--PVFVALFKPLGTAIAVFMAV 171 (227)
Q Consensus 125 ~~~li~l~v~~s~~~~~l~~~~~~~~~--~~~~s~~~~~~pv~a~l~~~ 171 (227)
...++..|+++....|.+|.+..+..+ ..+-+.+-++.......+-|
T Consensus 127 lItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lW 175 (226)
T COG4858 127 LITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLW 175 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHH
Confidence 556666677777677777777777665 55555555544444443333
No 181
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=20.74 E-value=1.7e+02 Score=22.74 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=20.4
Q ss_pred cCcchhhhhHHhhhhhhhHHHHhc
Q 027169 9 RSSQAKILGTVVSIAGAFIVSLYK 32 (227)
Q Consensus 9 ~~~~~~~~g~~l~~~Gv~li~~~~ 32 (227)
+.+...++-.+++.+|.+++....
T Consensus 56 ~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 56 HVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred cccceeeehHHHHHHHHHHhcccc
Confidence 678889999999999999996443
No 182
>PF11446 DUF2897: Protein of unknown function (DUF2897); InterPro: IPR021550 This is a bacterial family of uncharacterised proteins.
Probab=20.68 E-value=91 Score=19.46 Aligned_cols=15 Identities=20% Similarity=0.076 Sum_probs=6.9
Q ss_pred HHHHHHhhhhhcccc
Q 027169 187 VVIAFGFYAVIWAQG 201 (227)
Q Consensus 187 ~li~~Gv~l~~~~~~ 201 (227)
++|+..+.+..+..+
T Consensus 14 gvIigNia~LK~sAk 28 (55)
T PF11446_consen 14 GVIIGNIAALKYSAK 28 (55)
T ss_pred HHHHhHHHHHHHhcc
Confidence 334444555544444
No 183
>TIGR01998 PTS-II-BC-nag PTS system, N-acetylglucosamine-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes.
Probab=20.52 E-value=3.2e+02 Score=25.00 Aligned_cols=30 Identities=7% Similarity=0.082 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 027169 123 IQRTAVIYAAIVGTVIRSSIIAWCLQKKGP 152 (227)
Q Consensus 123 ~~~~~li~l~v~~s~~~~~l~~~~~~~~~~ 152 (227)
..|+.++.+|+.-.++-|..+.+.++|.+-
T Consensus 348 ~~~~~~~~iG~~~~~iyy~~F~~~I~k~~l 377 (476)
T TIGR01998 348 NQPLMLLVQGLVFFALYYVVFRFAIRRFNL 377 (476)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 357888888988888899999999998644
No 184
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=20.45 E-value=1.1e+02 Score=19.39 Aligned_cols=38 Identities=8% Similarity=0.246 Sum_probs=22.9
Q ss_pred chhhhhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHH
Q 027169 152 PVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVI 189 (227)
Q Consensus 152 ~~~~s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li 189 (227)
+...+.+....|..+..++-.+-+..-++.+|+|+++.
T Consensus 26 ~~~ig~~~~~~~~~G~~~G~~~~~~~~~~~~~igg~iL 63 (67)
T PF02659_consen 26 ALIIGIFQFIMPLLGLLLGRRLGRFIGSYAEWIGGIIL 63 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556667777777777655544455667665544
No 185
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=20.39 E-value=1.3e+02 Score=25.05 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=10.8
Q ss_pred hhhHHHHH---HHhhhhhcccccccc
Q 027169 183 LIGTVVIA---FGFYAVIWAQGKESN 205 (227)
Q Consensus 183 ~iG~~li~---~Gv~l~~~~~~~~~~ 205 (227)
.+++.+++ .|+++..+.++|+++
T Consensus 217 llaiPl~lLYEisI~i~~~~~~~~~~ 242 (258)
T PRK10921 217 LLAIPMYCLFEIGVFFSRFYVGKGRR 242 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34444443 466665544443333
No 186
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.34 E-value=91 Score=24.79 Aligned_cols=42 Identities=19% Similarity=0.362 Sum_probs=28.0
Q ss_pred hhhhchHHHHHHHHHHHHhCCCCCchhhhhHHHH-HHHhhhhh
Q 027169 156 ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVI-AFGFYAVI 197 (227)
Q Consensus 156 s~~~~~~pv~a~l~~~~~lgE~~~~~~~iG~~li-~~Gv~l~~ 197 (227)
+.+....|+.+...+.++-+-.-.+..|+|.++. +.|+..+.
T Consensus 44 G~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~ 86 (190)
T COG1971 44 GVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMII 86 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788877777665444556788876555 58888764
No 187
>PRK10054 putative transporter; Provisional
Probab=20.24 E-value=5.7e+02 Score=22.10 Aligned_cols=29 Identities=3% Similarity=0.055 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 027169 58 ALGGLLLTVTCFSSATWKIFQAAVLKEYPD 87 (227)
Q Consensus 58 ~~G~l~~l~aa~~~a~~~vl~k~~~~~~~~ 87 (227)
..|.+.... .+..........+..++...
T Consensus 44 ~~g~~~s~~-~~~~~~~~~~~G~l~Dr~g~ 72 (395)
T PRK10054 44 LIGYAMTIA-LTIGVVFSLGFGILADKFDK 72 (395)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHhhcCc
Confidence 345444433 33445555666666666653
No 188
>PRK10110 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Provisional
Probab=20.11 E-value=4.3e+02 Score=24.63 Aligned_cols=29 Identities=14% Similarity=0.073 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 027169 124 QRTAVIYAAIVGTVIRSSIIAWCLQKKGP 152 (227)
Q Consensus 124 ~~~~li~l~v~~s~~~~~l~~~~~~~~~~ 152 (227)
.|+.++.+|++-.++-|..+.++++|.+-
T Consensus 396 ~~~~~~~~g~~~~~iyy~vF~f~I~kfnl 424 (530)
T PRK10110 396 KWYMVPVVAAIWFVVYYVIFRFAITRFNL 424 (530)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 47778888888888888889999998643
Done!